CmrC

  miRNA Cluster

miRNA Cluster : hsa-mir-642a/mir-642b

Chromosome : chr19

Genomic Location : 45674928-45675008

No. of Candidates : 2




Multiple TSS are identified for some miRNA clusters

TSS GRCh19 : 46171478

TSS GRCh38 : 45668220

  miRNA Cluster Candidates
miRNA miRBase ID Chromosome Start End Strand
hsa-mir-642a MI0003657 Chr19 45674928 45675024 +
hsa-mir-642b MI0016685 Chr19 45674932 45675008 -

  miRNA Cluster and CNV co-localization

Cancer Abberation Kind Chromosome CNV Start CNV End Size [bp] Overlap [bp]
BLCA Amp chr19 45636043 45875062 239020 80
CESC Amp chr19 45462799 45908698 445900 80
GBM Del chr19 44992009 58366859 13382960 80
GBMLGG Del chr19 31785013 58366859 26602308 80
LGG Del chr19 27749586 58366859 30637733 80
OV Del chr19 43754429 58366859 14619646 80
SARC Del chr19 45595627 45716623 120997 80
TGCT Del chr19 41201914 47263282 6058721 80

  Genome Browser

  Chromosome Fragile site Association

     Fragile Site: FRA19A

     Location : chr19:32400001-59128983

     Length : 26728983 bp

     Frequency : Common

     PMID : 2579891