CmrC

  miRNA Cluster

miRNA Cluster : hsa-mir-181c/mir-181d

Chromosome : chr19

Genomic Location : 13874699-13875011

No. of Candidates : 2




Multiple TSS are identified for some miRNA clusters

TSS GRCh19 : 13976039

TSS GRCh38 : 13865225

  miRNA Cluster Candidates
miRNA miRBase ID Chromosome Start End Strand
hsa-mir-181c MI0000271 Chr19 13874699 13874808 +
hsa-mir-181d MI0003139 Chr19 13874875 13875011 +

  miRNA Cluster and CNV co-localization

Cancer Abberation Kind Chromosome CNV Start CNV End Size [bp] Overlap [bp]
BLCA Del chr19 13746287 13958756 212468 312
GBM Amp chr19 13864543 13917422 52879 312
GBMLGG Amp chr19 7415478 14469042 7099491 312
LGG Amp chr19 13194099 14068686 874586 312
LIHC Del chr19 13564946 14372533 807586 312
LUAD Del chr19 284018 16683279 16510073 312
OV Amp chr19 12677447 19629492 6952041 312
PCPG Amp chr19 13780023 13926932 146909 312
SARC Amp chr19 13864543 14143786 279242 312
THCA Del chr19 13085866 14078298 992431 312
UCEC Amp chr19 12942516 14019403 1076886 312

  Genome Browser

  Chromosome Fragile site Association

     Fragile Site: FRA19B

     Location : chr19:1-20000000

     Length : 20000000 bp

     Frequency : Rare

     PMID : 3568428