rC
miRNA Cluster Details
miRNA Cluster
miRNA Cluster : hsa-mir-133a-1/mir-1-2
Chromosome : chr18
Genomic Location : 21825698-21829088
No. of Candidates : 2
TSS GRCh19 : 19411366
TSS GRCh38 : 21831405
miRNA Cluster Candidates
| miRNA | miRBase ID | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| hsa-mir-1-2 | MI0000437 | Chr18 | 21829004 | 21829088 | - |
| hsa-mir-133a-1 | MI0000450 | Chr18 | 21825698 | 21825785 | - |
miRNA Cluster and CNV co-localization
| Cancer | Abberation Kind | Chromosome | CNV Start | CNV End | Size [bp] | Overlap [bp] |
|---|---|---|---|---|---|---|
| ACC | Amp | chr18 | 21544853 | 21882611 | 337759 | 3390 |
| COAD | Amp | chr18 | 21109786 | 21931478 | 821693 | 3390 |
| COADREAD | Amp | chr18 | 21672540 | 21878726 | 206187 | 3390 |
| ESCA | Amp | chr18 | 21610160 | 22549711 | 939554 | 3390 |
| LUAD | Amp | chr18 | 21740540 | 21848067 | 107528 | 3390 |
| LUSC | Amp | chr18 | 21785578 | 21828009 | 42432 | 2311 |
| PAAD | Amp | chr18 | 21117668 | 24305805 | 3188141 | 3390 |
| STAD | Amp | chr18 | 21109786 | 24455167 | 3345385 | 3390 |
Genome Browser
Chromosome Fragile site Association