rC
miRNA Cluster Details
miRNA Cluster
miRNA Cluster : hsa-mir-4520-1/mir-4520-2
Chromosome : chr17
Genomic Location : 6655440-6655502
No. of Candidates : 2
TSS GRCh19 : 6560584
TSS GRCh38 : 6657265
miRNA Cluster Candidates
| miRNA | miRBase ID | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| hsa-mir-4520-2 | MI0017358 | Chr17 | 6655449 | 6655502 | + |
| hsa-mir-4520-1 | MI0016886 | Chr17 | 6655440 | 6655509 | - |
miRNA Cluster and CNV co-localization
| Cancer | Abberation Kind | Chromosome | CNV Start | CNV End | Size [bp] | Overlap [bp] |
|---|---|---|---|---|---|---|
| ACC | Del | chr17 | 6263854 | 6968174 | 704320 | 62 |
| BLCA | Del | chr17 | 1083981 | 21402080 | 20318172 | 62 |
| BRCA | Del | chr17 | 1083981 | 21402080 | 20318172 | 62 |
| CESC | Del | chr17 | 1083981 | 20784411 | 19700504 | 62 |
| CHOL | Del | chr17 | 6469924 | 6759986 | 290062 | 62 |
| COAD | Del | chr17 | 1083981 | 21402080 | 20318172 | 62 |
| COADREAD | Del | chr17 | 1083981 | 21402080 | 20318172 | 62 |
| DLBC | Del | chr17 | 1378223 | 7555294 | 6177095 | 62 |
| ESCA | Del | chr17 | 1083981 | 21402080 | 20318172 | 62 |
| GBM | Del | chr17 | 3182610 | 11098606 | 7916020 | 62 |
| GBMLGG | Del | chr17 | 4482208 | 10030170 | 5547985 | 62 |
| HNSC | Del | chr17 | 1083981 | 21402080 | 20318172 | 62 |
| KIPAN | Del | chr17 | 1083981 | 20862114 | 19778207 | 62 |
| KIRC | Del | chr17 | 1083981 | 16128692 | 15044786 | 62 |
| KIRP | Del | chr17 | 4485039 | 9017738 | 4532722 | 62 |
| LIHC | Del | chr17 | 1083981 | 21399695 | 20315787 | 62 |
| LUAD | Del | chr17 | 1083981 | 21399695 | 20315787 | 62 |
| LUSC | Del | chr17 | 1083981 | 21402080 | 20318172 | 62 |
| MESO | Del | chr17 | 1083981 | 15831481 | 14747575 | 62 |
| PAAD | Del | chr17 | 1083981 | 18957450 | 17873543 | 62 |
| PCPG | Del | chr17 | 1083981 | 21402080 | 20318172 | 62 |
| PRAD | Del | chr17 | 1083981 | 15665794 | 14581888 | 62 |
| READ | Del | chr17 | 1083981 | 21402080 | 20318172 | 62 |
| SARC | Del | chr17 | 1083981 | 9837768 | 8753865 | 62 |
| SKCM | Del | chr17 | 1083981 | 21402080 | 20318172 | 62 |
| STAD | Del | chr17 | 1083981 | 21402080 | 20318172 | 62 |
| TGCT | Del | chr17 | 1083981 | 15654426 | 14570520 | 62 |
| THYM | Del | chr17 | 6434141 | 6978790 | 544649 | 62 |
| UCEC | Del | chr17 | 4753739 | 19748298 | 14994578 | 62 |
| UCS | Del | chr17 | 1672213 | 17990557 | 16318365 | 62 |
Genome Browser
Chromosome Fragile site Association