CmrC

  miRNA Cluster

miRNA Cluster : hsa-mir-16-1/mir-15a

Chromosome : chr13

Genomic Location : 50048973-50049201

No. of Candidates : 2




Multiple TSS are identified for some miRNA clusters

TSS GRCh19 : 50699676

TSS GRCh38 : 50125540

  miRNA Cluster Candidates
miRNA miRBase ID Chromosome Start End Strand
hsa-mir-15a MI0000069 Chr13 50049119 50049201 -
hsa-mir-16-1 MI0000070 Chr13 50048973 50049061 -

  miRNA Cluster and CNV co-localization

Cancer Abberation Kind Chromosome CNV Start CNV End Size [bp] Overlap [bp]
BLCA Del chr13 38677083 53217269 14540185 228
BRCA Del chr13 37630715 57086259 19455542 228
CESC Del chr13 35618794 55272105 19653310 228
GBM Del chr13 44531395 60688110 16156714 228
GBMLGG Del chr13 44531395 64610820 20079422 228
HNSC Del chr13 49920448 51158912 1238465 228
KIPAN Del chr13 49923945 51281874 1357930 228
KIRC Del chr13 49923945 51326088 1402144 228
LGG Del chr13 49923945 51050074 1126130 228
LIHC Del chr13 37636980 60876241 23239259 228
LUSC Del chr13 49923945 52684325 2760380 228
OV Del chr13 37023962 53863458 16839495 228
PRAD Del chr13 37323669 67816750 30493077 228
SARC Del chr13 42837098 53944194 11107096 228

  Genome Browser

  Chromosome Fragile site Association

 No overlapping fragile site with this miRNA cluster