CmrC

  miRNA Cluster

miRNA Cluster : hsa-mir-29c/mir-29b-2

Chromosome : chr1

Genomic Location : 207801852-207802523

No. of Candidates : 2




Multiple TSS are identified for some miRNA clusters

TSS GRCh19 : 208042510

TSS GRCh38 : 207869165

  miRNA Cluster Candidates
miRNA miRBase ID Chromosome Start End Strand
hsa-mir-29b-2 MI0000107 Chr1 207802443 207802523 -
hsa-mir-29c MI0000735 Chr1 207801852 207801939 -

  miRNA Cluster and CNV co-localization

Cancer Abberation Kind Chromosome CNV Start CNV End Size [bp] Overlap [bp]
BRCA Amp chr1 149907993 247650404 97934162 671
CESC Amp chr1 204300255 233823659 29690023 671
COAD Amp chr1 149913375 221405132 71693548 671
COADREAD Amp chr1 149909846 247650404 97932309 671
DLBC Amp chr1 207573308 212123034 4549724 671
ESCA Amp chr1 207697679 208086405 388727 671
HNSC Amp chr1 207561521 207891839 330319 671
KIPAN Amp chr1 206845818 215901436 9055616 671
KIRC Amp chr1 207721071 208150167 429097 671
KIRP Amp chr1 207651643 208355700 704058 671
LIHC Amp chr1 149907993 247650404 97934162 671
LUAD Amp chr1 149907993 247650404 97934162 671
LUSC Amp chr1 149907993 247650404 97934162 671
MESO Amp chr1 206421552 207891839 1470282 671
PAAD Amp chr1 207573308 208604550 1031243 671
PCPG Amp chr1 207765604 208264265 498662 671
READ Amp chr1 207707773 208667667 959895 671
SARC Del chr1 207794912 207803321 8410 671
SKCM Amp chr1 149909846 247650404 97932309 671
STAD Amp chr1 207230428 210757871 3527441 671
THCA Amp chr1 197357946 211945396 14791663 671
UCEC Amp chr1 149907993 247650404 97934162 671
UCS Amp chr1 207319993 207865887 545895 671
UVM Amp chr1 201622278 219910887 18492824 671

  Genome Browser

  Chromosome Fragile site Association

 No overlapping fragile site with this miRNA cluster