CmrC

  miRNA Cluster

miRNA Cluster : hsa-mir-449a/mir-449c

Chromosome : chr5

Genomic Location : 55170532-55172353

No. of Candidates : 3




Multiple TSS are identified for some miRNA clusters

TSS GRCh19 : 54472345

TSS GRCh38 : 55176517

  miRNA Cluster Candidates
miRNA miRBase ID Chromosome Start End Strand
hsa-mir-449c MI0003823 Chr5 55172262 55172353 -
hsa-mir-449b MI0003673 Chr5 55170646 55170742 -
hsa-mir-449a MI0001648 Chr5 55170532 55170622 -

  miRNA Cluster and CNV co-localization

Cancer Abberation Kind Chromosome CNV Start CNV End Size [bp] Overlap [bp]
BRCA Del chr5 53347229 112043083 58735722 1821
CESC Del chr5 54917706 55183188 265483 1821
ESCA Del chr5 55116971 91995892 36878911 1821
HNSC Del chr5 54879407 129041113 74201572 1821
LUSC Del chr5 53231175 180933469 127833465 1821
OV Del chr5 53552626 122315045 68802285 1821
PRAD Del chr5 53039531 79893132 26853595 1821
UCEC Del chr5 52080939 90689064 38608109 1821
UCS Del chr5 54248434 55889536 1641101 1821

  Genome Browser

  Chromosome Fragile site Association

 No overlapping fragile site with this miRNA cluster