CmrC

  miRNA Cluster

miRNA Cluster : hsa-mir-493/mir-136

Chromosome : chr14

Genomic Location : 100869060-100884783

No. of Candidates : 8




Multiple TSS are identified for some miRNA clusters

TSS GRCh19 : 101292454

TSS GRCh38 : 100826117

  miRNA Cluster Candidates
miRNA miRBase ID Chromosome Start End Strand
hsa-mir-493 MI0003132 Chr14 100869060 100869148 +
hsa-mir-337 MI0000806 Chr14 100874493 100874585 +
hsa-mir-665 MI0005563 Chr14 100875033 100875104 +
hsa-mir-431 MI0001721 Chr14 100881007 100881120 +
hsa-mir-433 MI0001723 Chr14 100881886 100881978 +
hsa-mir-127 MI0000472 Chr14 100882979 100883075 +
hsa-mir-432 MI0003133 Chr14 100884483 100884576 +
hsa-mir-136 MI0000475 Chr14 100884702 100884783 +

  miRNA Cluster and CNV co-localization

Cancer Abberation Kind Chromosome CNV Start CNV End Size [bp] Overlap [bp]
CESC Del chr14 99699409 101118665 1419257 15723
CHOL Del chr14 99699409 103886034 4186626 15723
COADREAD Del chr14 100395390 102487214 2091825 15723
HNSC Del chr14 100131616 101052423 920808 15723
KIPAN Del chr14 100786671 101067970 281300 15723
KIRC Del chr14 100704099 101067970 363872 15723
LGG Del chr14 99696040 102197669 2501630 15723
LIHC Del chr14 94723252 105521701 10798450 15723
LUAD Del chr14 100485875 100955396 469522 15723
LUSC Amp chr14 100853697 101088717 235021 15723
OV Amp chr14 100336536 101265822 929287 15723
SKCM Del chr14 98974594 103078526 4103933 15723
STAD Del chr14 100451035 101081746 630712 15723

  Genome Browser

  Chromosome Fragile site Association

 No overlapping fragile site with this miRNA cluster