rC
miRNA Cluster Details
miRNA Cluster
miRNA Cluster : hsa-mir-24-2/mir-23a
Chromosome : chr19
Genomic Location : 13836287-13836659
No. of Candidates : 3
TSS GRCh19 : 13953731
TSS GRCh38 : 13842917
miRNA Cluster Candidates
| miRNA | miRBase ID | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| hsa-mir-23a | MI0000079 | Chr19 | 13836587 | 13836659 | - |
| hsa-mir-27a | MI0000085 | Chr19 | 13836440 | 13836517 | - |
| hsa-mir-24-2 | MI0000081 | Chr19 | 13836287 | 13836359 | - |
miRNA Cluster and CNV co-localization
| Cancer | Abberation Kind | Chromosome | CNV Start | CNV End | Size [bp] | Overlap [bp] |
|---|---|---|---|---|---|---|
| BLCA | Del | chr19 | 13746287 | 13958756 | 212468 | 372 |
| GBM | Amp | chr19 | 13743007 | 13860084 | 117078 | 372 |
| GBMLGG | Amp | chr19 | 7415478 | 14469042 | 7099491 | 372 |
| LGG | Amp | chr19 | 13194099 | 14068686 | 874586 | 372 |
| LIHC | Del | chr19 | 13564946 | 14372533 | 807586 | 372 |
| LUAD | Del | chr19 | 284018 | 16683279 | 16510073 | 372 |
| OV | Amp | chr19 | 12677447 | 19629492 | 6952041 | 372 |
| PCPG | Amp | chr19 | 13780023 | 13926932 | 146909 | 372 |
| THCA | Del | chr19 | 13085866 | 14078298 | 992431 | 372 |
| UCEC | Amp | chr19 | 12942516 | 14019403 | 1076886 | 372 |
Genome Browser
Chromosome Fragile site Association
Fragile Site: FRA19B
Location : chr19:1-20000000
Length : 20000000 bp
Frequency : Rare
PMID : 3568428