CmrC

  miRNA Cluster

miRNA Cluster : hsa-mir-3677/mir-4717

Chromosome : chr16

Genomic Location : 2270713-2274691

No. of Candidates : 3




Multiple TSS are identified for some miRNA clusters

TSS GRCh19 : 2318482

TSS GRCh38 : 2268481

  miRNA Cluster Candidates
miRNA miRBase ID Chromosome Start End Strand
hsa-mir-3677 MI0016078 Chr16 2270713 2270772 +
hsa-mir-940 MI0005762 Chr16 2271747 2271840 +
hsa-mir-4717 MI0017352 Chr16 2274620 2274691 +

  miRNA Cluster and CNV co-localization

Cancer Abberation Kind Chromosome CNV Start CNV End Size [bp] Overlap [bp]
BLCA Del chr16 605262 5251990 4646730 3978
BRCA Amp chr16 603459 31838978 31196841 3978
CESC Amp chr16 2096458 2318198 221741 3978
KIPAN Amp chr16 1991252 2278789 287538 3978
KIRC Amp chr16 1986047 2278789 292743 3978
KIRP Amp chr16 603459 7454847 6851391 3978
LIHC Amp chr16 2182793 2278888 96096 3978
LUAD Amp chr16 1419646 2459642 1039997 3978
PCPG Del chr16 603845 2506243 1902400 3978
PRAD Amp chr16 1822458 2986550 1164093 3978
SARC Amp chr16 2257942 2492764 234823 3978
SKCM Amp chr16 2216802 2453099 236298 3978

  Genome Browser

  Chromosome Fragile site Association

 No overlapping fragile site with this miRNA cluster