rC
miRNA Cluster Details
miRNA Cluster
miRNA Cluster : hsa-mir-199b/mir-3154
Chromosome : chr9
Genomic Location : 128244721-128245030
No. of Candidates : 2
TSS GRCh19 : 131007254
TSS GRCh38 : 128244975
miRNA Cluster Candidates
| miRNA | miRBase ID | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| hsa-mir-3154 | MI0014182 | Chr9 | 128244947 | 128245030 | - |
| hsa-mir-199b | MI0000282 | Chr9 | 128244721 | 128244830 | - |
miRNA Cluster and CNV co-localization
| Cancer | Abberation Kind | Chromosome | CNV Start | CNV End | Size [bp] | Overlap [bp] |
|---|---|---|---|---|---|---|
| ACC | Amp | chr9 | 128163308 | 129887578 | 1724271 | 309 |
| ESCA | Amp | chr9 | 127968699 | 128345153 | 376455 | 309 |
| GBM | Amp | chr9 | 128238595 | 128248447 | 9853 | 309 |
| GBMLGG | Amp | chr9 | 125232285 | 129704402 | 4472118 | 309 |
| HNSC | Amp | chr9 | 128056358 | 129131725 | 1075368 | 309 |
| LGG | Amp | chr9 | 128215354 | 128834519 | 619166 | 309 |
| OV | Del | chr9 | 128098776 | 128284628 | 185853 | 309 |
| PRAD | Amp | chr9 | 128238595 | 128247188 | 8594 | 309 |
| STAD | Amp | chr9 | 128231175 | 128256360 | 25186 | 309 |
| THCA | Del | chr9 | 68425024 | 138044300 | 69898813 | 309 |
Genome Browser
Chromosome Fragile site Association