CmrC

  miRNA Cluster

miRNA Cluster : hsa-mir-550a-2/mir-550b-2

Chromosome : chr7

Genomic Location : 32732981-32733077

No. of Candidates : 2




Multiple TSS are identified for some miRNA clusters

TSS GRCh19 : 32535120

TSS GRCh38 : 32495508


TSS GRCh19 : 32801849

TSS GRCh38 : 32762237

  miRNA Cluster Candidates
miRNA miRBase ID Chromosome Start End Strand
hsa-mir-550a-2 MI0003601 Chr7 32732981 32733077 +
hsa-mir-550b-2 MI0016687 Chr7 32732981 32733077 -

  miRNA Cluster and CNV co-localization

Cancer Abberation Kind Chromosome CNV Start CNV End Size [bp] Overlap [bp]
BRCA Amp chr7 30183818 33084393 2900572 96
COAD Amp chr7 665647 57166220 56528644 96
COADREAD Amp chr7 665647 57170928 56533352 96
ESCA Amp chr7 32490493 32962807 472315 96
HNSC Amp chr7 32441010 32790324 349315 96
LUAD Amp chr7 665647 34443721 33778050 96
OV Del chr7 32677861 32792513 114653 96
PCPG Amp chr7 31810263 39034180 7223904 96
PRAD Amp chr7 32504827 33593831 1089005 96
READ Amp chr7 30844823 32790324 1945498 96
SARC Amp chr7 32254032 32963023 708992 96
STAD Amp chr7 32691774 32733748 41975 96
TGCT Amp chr7 27545832 35119182 7573344 96

  Genome Browser

  Chromosome Fragile site Association

 No overlapping fragile site with this miRNA cluster