rC
miRNA Cluster Details
miRNA Cluster
miRNA Cluster : hsa-mir-6873/mir-6834
Chromosome : chr6
Genomic Location : 33287227-33290325
No. of Candidates : 2
TSS GRCh19 : 33257377
TSS GRCh38 : 33289600
TSS GRCh19 : 33257002
TSS GRCh38 : 33289225
miRNA Cluster Candidates
| miRNA | miRBase ID | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| hsa-mir-6834 | MI0022679 | Chr6 | 33290245 | 33290325 | + |
| hsa-mir-6873 | MI0022720 | Chr6 | 33287227 | 33287289 | - |
miRNA Cluster and CNV co-localization
| Cancer | Abberation Kind | Chromosome | CNV Start | CNV End | Size [bp] | Overlap [bp] |
|---|---|---|---|---|---|---|
| BRCA | Amp | chr6 | 33282699 | 33442032 | 159334 | 3098 |
| CESC | Amp | chr6 | 1014046 | 37695496 | 36648992 | 3098 |
| CHOL | Amp | chr6 | 33116894 | 40334962 | 7218031 | 3098 |
| COADREAD | Amp | chr6 | 33175359 | 34412942 | 1237584 | 3098 |
| LGG | Amp | chr6 | 33245978 | 33288620 | 42643 | 1393 |
| LIHC | Amp | chr6 | 1014046 | 57341687 | 56192205 | 3098 |
| LUAD | Amp | chr6 | 1014046 | 57341687 | 56192205 | 3098 |
| MESO | Amp | chr6 | 24808274 | 33442048 | 8601324 | 3098 |
| OV | Amp | chr6 | 1014046 | 46958100 | 45911557 | 3098 |
| PCPG | Amp | chr6 | 24950971 | 57341687 | 32255287 | 3098 |
| SKCM | Amp | chr6 | 1014046 | 57341687 | 56192205 | 3098 |
| UVM | Amp | chr6 | 1014046 | 48900747 | 47854104 | 3098 |
Genome Browser
Chromosome Fragile site Association
Fragile Site: FRA6H
Location : chr6:30400001-46200000
Length : 15800000 bp
Frequency : Common
PMID : 17290399