miRNA Cluster Details
  miRNA Cluster
miRNA Cluster : hsa-mir-7853/mir-5683
Chromosome : chr6
Genomic Location : 6169304-6169409
No. of Candidates : 2
TSS GRCh19 : 6320894
TSS GRCh38 : 6320661
  miRNA Cluster Candidates
miRNA | miRBase ID | Chromosome | Start | End | Strand |
---|---|---|---|---|---|
hsa-mir-5683 | MI0019284 | Chr6 | 6169334 | 6169409 | + |
hsa-mir-7853 | MI0025523 | Chr6 | 6169304 | 6169435 | - |
  miRNA Cluster and CNV co-localization
Cancer | Abberation Kind | Chromosome | CNV Start | CNV End | Size [bp] | Overlap [bp] |
---|---|---|---|---|---|---|
BLCA | Amp | chr6 | 5005404 | 28555861 | 23518001 | 105 |
BRCA | Amp | chr6 | 3587239 | 26664304 | 23077060 | 105 |
CESC | Amp | chr6 | 1014046 | 37695496 | 36648992 | 105 |
CHOL | Amp | chr6 | 3256536 | 8681494 | 5424958 | 105 |
ESCA | Del | chr6 | 5898125 | 6209714 | 311590 | 105 |
HNSC | Amp | chr6 | 5072184 | 6560730 | 1488546 | 105 |
LGG | Amp | chr6 | 6094127 | 6602530 | 508404 | 105 |
LIHC | Amp | chr6 | 1014046 | 57341687 | 56192205 | 105 |
LUAD | Amp | chr6 | 1014046 | 57341687 | 56192205 | 105 |
OV | Amp | chr6 | 1014046 | 46958100 | 45911557 | 105 |
PCPG | Amp | chr6 | 1014046 | 19819109 | 18805060 | 105 |
SARC | Del | chr6 | 6133201 | 6504083 | 370883 | 105 |
SKCM | Amp | chr6 | 1014046 | 57341687 | 56192205 | 105 |
THYM | Del | chr6 | 3894699 | 7922462 | 4027763 | 105 |
UCEC | Amp | chr6 | 5232514 | 6184373 | 951860 | 105 |
UCS | Amp | chr6 | 5144002 | 6420641 | 1276639 | 105 |
UVM | Amp | chr6 | 1014046 | 48900747 | 47854104 | 105 |
  Genome Browser
  Chromosome Fragile site Association
    Fragile Site: FRA6B
    Location : chr6:4200001-7100000
    Length : 2900000 bp
    Frequency : Common
    PMID : 8750194