rC
miRNA Cluster Details
miRNA Cluster
miRNA Cluster : hsa-mir-103a-1/mir-103b-1
Chromosome : chr5
Genomic Location : 168560896-168560965
No. of Candidates : 2
TSS GRCh19 : 168006363
TSS GRCh38 : 168579358
miRNA Cluster Candidates
| miRNA | miRBase ID | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| hsa-mir-103b-1 | MI0007261 | Chr5 | 168560904 | 168560965 | + |
| hsa-mir-103a-1 | MI0000109 | Chr5 | 168560896 | 168560973 | - |
miRNA Cluster and CNV co-localization
| Cancer | Abberation Kind | Chromosome | CNV Start | CNV End | Size [bp] | Overlap [bp] |
|---|---|---|---|---|---|---|
| BLCA | Del | chr5 | 165139356 | 172266669 | 7127312 | 69 |
| GBMLGG | Del | chr5 | 168556342 | 168661867 | 105526 | 69 |
| HNSC | Del | chr5 | 167963020 | 169448298 | 1485278 | 69 |
| KIPAN | Amp | chr5 | 115423381 | 180933469 | 65601392 | 69 |
| KIRC | Amp | chr5 | 115423381 | 180933469 | 65601392 | 69 |
| LGG | Del | chr5 | 168556342 | 168712234 | 155893 | 69 |
| LUSC | Del | chr5 | 53231175 | 180933469 | 127833465 | 69 |
| SKCM | Del | chr5 | 168478302 | 168641087 | 162786 | 69 |
Genome Browser
Chromosome Fragile site Association
Fragile Site: FRA5G
Location : chr5:168500001-180915260
Length : 12415260 bp
Frequency : Rare
PMID : 15650228