rC
miRNA Cluster Details
miRNA Cluster
miRNA Cluster : hsa-mir-143/mir-145
Chromosome : chr5
Genomic Location : 149428918-149430733
No. of Candidates : 2
TSS GRCh19 : 148786440
TSS GRCh38 : 149406877
miRNA Cluster Candidates
| miRNA | miRBase ID | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| hsa-mir-143 | MI0000459 | Chr5 | 149428918 | 149429023 | + |
| hsa-mir-145 | MI0000461 | Chr5 | 149430646 | 149430733 | + |
miRNA Cluster and CNV co-localization
| Cancer | Abberation Kind | Chromosome | CNV Start | CNV End | Size [bp] | Overlap [bp] |
|---|---|---|---|---|---|---|
| HNSC | Del | chr5 | 149251178 | 149436196 | 185019 | 1815 |
| KIPAN | Amp | chr5 | 115423381 | 180933469 | 65601392 | 1815 |
| KIRC | Amp | chr5 | 115423381 | 180933469 | 65601392 | 1815 |
| LUSC | Del | chr5 | 53231175 | 180933469 | 127833465 | 1815 |
| SKCM | Del | chr5 | 138579751 | 160219087 | 21730655 | 1815 |
Genome Browser
Chromosome Fragile site Association