rC
miRNA Cluster Details
miRNA Cluster
miRNA Cluster : hsa-mir-3199-1/mir-3199-2
Chromosome : chr22
Genomic Location : 27920525-27920611
No. of Candidates : 2
TSS GRCh19 : 28315486
TSS GRCh38 : 27919498
miRNA Cluster Candidates
| miRNA | miRBase ID | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| hsa-mir-3199-2 | MI0014248 | Chr22 | 27920526 | 27920611 | + |
| hsa-mir-3199-1 | MI0014247 | Chr22 | 27920525 | 27920612 | - |
miRNA Cluster and CNV co-localization
| Cancer | Abberation Kind | Chromosome | CNV Start | CNV End | Size [bp] | Overlap [bp] |
|---|---|---|---|---|---|---|
| BLCA | Amp | chr22 | 27918125 | 27922044 | 3920 | 86 |
| KIPAN | Del | chr22 | 27918441 | 28034664 | 116224 | 86 |
| KIRP | Del | chr22 | 27763684 | 29652603 | 1888921 | 86 |
| LUSC | Amp | chr22 | 27615106 | 28170737 | 555659 | 86 |
| PRAD | Del | chr22 | 27883407 | 28131286 | 247880 | 86 |
| SKCM | Del | chr22 | 27917395 | 27943068 | 25674 | 86 |
Genome Browser
Chromosome Fragile site Association