CmrC

  miRNA Cluster

miRNA Cluster : hsa-mir-296/mir-298

Chromosome : chr20

Genomic Location : 58817615-58818313

No. of Candidates : 2




Multiple TSS are identified for some miRNA clusters

TSS GRCh19 : 57425932

TSS GRCh38 : 58850877

  miRNA Cluster Candidates
miRNA miRBase ID Chromosome Start End Strand
hsa-mir-298 MI0005523 Chr20 58818226 58818313 -
hsa-mir-296 MI0000747 Chr20 58817615 58817694 -

  miRNA Cluster and CNV co-localization

Cancer Abberation Kind Chromosome CNV Start CNV End Size [bp] Overlap [bp]
BRCA Amp chr20 46847935 63588484 16743264 698
CESC Amp chr20 56960082 62080339 5120258 698
COAD Amp chr20 41732145 63588484 21859054 698
COADREAD Amp chr20 41732145 63588484 21859054 698
ESCA Amp chr20 58063268 59427544 1364276 698
KIRC Amp chr20 58440722 59804252 1363530 698
LIHC Amp chr20 57619676 58997784 1378108 698
LUAD Amp chr20 58101618 59756228 1654610 698
OV Amp chr20 46984868 63588484 16606331 698
PAAD Amp chr20 57508707 58959592 1450885 698
PRAD Amp chr20 57904736 59072388 1167652 698
READ Amp chr20 41732145 63588484 21859054 698
SARC Amp chr20 58747447 59019375 271928 698
SKCM Amp chr20 45550018 63588484 18041181 698
STAD Amp chr20 43073331 63588484 20517867 698
UCEC Amp chr20 57106268 59290821 2184553 698
UCS Amp chr20 57022772 58900339 1877567 698

  Genome Browser

  Chromosome Fragile site Association

 No overlapping fragile site with this miRNA cluster