Riboflavin SNP Data

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Gene Symbol	Chromosome	Start	End	rs ID	Strand	NCBI ref	Observed	Class	Function	Submitter Count	Submitter	Frequency Count	Allele Frequency
XDH	chr2	31624835	31624836	rs494852	-	C	A/G	single	intron	21	1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SNP500CANCER,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,	2	0.197805
XDH	chr2	31624986	31624988	rs35575779	+	AG	-/AG	deletion	intron	10	1000GENOMES,ABI,DEVINE_LAB,EGP_SNPS,GMI,HUMANGENOME_JCVI,LUNTER,PJP,SSMP,TISHKOFF,	2	0.055415
XDH	chr2	31625609	31625610	rs513311	-	G	A/C	single	intron	15	1000GENOMES,ABI,EGP_SNPS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SSMP,TISHKOFF,WUGSC_SSAHASNP,	2	0.071771
XDH	chr2	31626044	31626045	rs1346644	-	G	C/G	single	intron	15	1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,SI_EXO,SSMP,TISHKOFF,TSC-CSHL,	2	0.889847
XDH	chr2	31626093	31626094	rs206797	-	C	G/T	single	intron	14	1000GENOMES,ABI,EGP_SNPS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,KWOK,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP,	2	0.943922
XDH	chr2	31626384	31626385	rs1429372	-	A	C/T	single	intron	18	1000GENOMES,ABI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGBASE,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,SNP500CANCER,SSMP,TISHKOFF,TSC-CSHL,YUSUKE,	2	0.433107
XDH	chr2	31626635	31626636	rs206798	-	C	A/G	single	intron	19	1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL,	2	0.210345
XDH	chr2	31626947	31626948	rs11302270	+	A	-/A	deletion	intron	11	1000GENOMES,BILGI_BIOE,BUSHMAN,DEVINE_LAB,EGP_SNPS,GMI,HUMANGENOME_JCVI,LUNTER,PJP,SSMP,TISHKOFF,	2	0.151042
XDH	chr2	31627105	31627106	rs206799	-	G	C/G	single	intron	13	1000GENOMES,ABI,EGP_SNPS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,	2	0.940143
XDH	chr2	31627946	31627947	rs206800	-	A	C/T	single	intron	20	1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KWOK,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP,	2	0.210658
XDH	chr2	31628248	31628249	rs11323608	+	A	-/A	deletion	intron	4	1000GENOMES,DEVINE_LAB,EGP_SNPS,LUNTER,	2	0.014431
XDH	chr2	31628704	31628705	rs1366814	-	T	A/C	single	intron	15	1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,SSMP,TISHKOFF,TSC-CSHL,	2	0.917917
XDH	chr2	31628745	31628746	rs206801	-	G	C/T	single	intron	15	1000GENOMES,CLINSEQ_SNP,EGP_SNPS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KWOK,NHLBI-ESP,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP,	2	0.935686
XDH	chr2	31628954	31628955	rs206802	-	C	C/G	single	intron	19	1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,	2	0.143054
XDH	chr2	31629029	31629030	rs206803	-	A	G/T	single	intron	18	1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SSMP,TISHKOFF,	2	0.150255
XDH	chr2	31629511	31629512	rs6759319	+	C	C/T	single	intron	11	1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,ILLUMINA,PERLEGEN,SSMP,TISHKOFF,	2	0.924210
XDH	chr2	31630381	31630382	rs3769616	-	C	A/G	single	intron	7	1000GENOMES,AFFY,CSHL-HAPMAP,ILLUMINA,KRIBB_YJKIM,SSMP,YUSUKE,	2	0.044337
XDH	chr2	31630845	31630846	rs206804	-	C	A/G	single	intron	21	1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SNP500CANCER,SSMP,TISHKOFF,WI_SSAHASNP,	2	0.202232
XDH	chr2	31630866	31630867	rs206805	-	C	A/G	single	intron	23	1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SNP500CANCER,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,	2	0.199901
XDH	chr2	31632702	31632703	rs116760403	+	C	A/C	single	intron	1	1000GENOMES,	2	0.014795
XDH	chr2	31632955	31632956	rs1978639	-	C	G/T	single	intron	11	1000GENOMES,ABI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA-UK,SSMP,TISHKOFF,TSC-CSHL,	2	0.541602
XDH	chr2	31633013	31633014	rs1978638	-	T	A/C	single	intron	11	1000GENOMES,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA-UK,SSMP,TISHKOFF,TSC-CSHL,	2	0.480488
XDH	chr2	31633437	31633438	rs61706447	+	C	C/T	single	intron	8	1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA-UK,SSMP,TISHKOFF,	2	0.540503
XDH	chr2	31633964	31633965	rs206806	-	T	A/G	single	intron	16	1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,	2	0.420237
XDH	chr2	31634011	31634012	rs112810470	+	G	A/G	single	intron	6	1000GENOMES,BL,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF,	2	0.270183
XDH	chr2	31634075	31634076	rs206807	-	C	G/T	single	intron	9	1000GENOMES,ENSEMBL,GMI,HGSV,KWOK,PJP,SC_JCM,SSMP,TISHKOFF,	2	0.939908
XDH	chr2	31634129	31634130	rs206808	-	C	C/G	single	intron	10	1000GENOMES,ABI,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,KWOK,SC_JCM,SSMP,WI_SSAHASNP,	2	0.504125
XDH	chr2	31634138	31634139	rs206809	-	C	A/G	single	intron	6	1000GENOMES,ENSEMBL,HGSV,KWOK,SC_JCM,SSMP,	2	0.050459
XDH	chr2	31634823	31634823	rs45455193	-	-	-/CACT	insertion	intron	5	1000GENOMES,BILGI_BIOE,BUSHMAN,EGP_SNPS,LUNTER,	2	0.521277
XDH	chr2	31634861	31634862	rs45555736	-	T	A/T	single	intron	3	1000GENOMES,EGP_SNPS,GMI,	2	0.962352
XDH	chr2	31635317	31635318	rs200181293	+	A	-/A	deletion	intron	4	1000GENOMES,LUNTER,SSMP,TISHKOFF,	2	0.063820
XDH	chr2	31636216	31636217	rs206810	-	T	A/G	single	intron	16	1000GENOMES,ABI,EGP_SNPS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP,	2	0.934866
XDH	chr2	31636864	31636865	rs45503200	-	C	A/G	single	intron	2	1000GENOMES,EGP_SNPS,	2	0.014780
XDH	chr2	31636914	31636915	rs206811	-	A	C/T	single	intron	20	1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SNP500CANCER,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP,	2	0.600252
XDH	chr2	31637252	31637253	rs45451795	-	G	C/T	single	intron	5	1000GENOMES,BCM-HGSC-SUB,EGP_SNPS,ILLUMINA,SSMP,	2	0.970439
XDH	chr2	31637597	31637598	rs36208390	+	C	C/G	single	untranslated-5	7	1000GENOMES,EGP_SNPS,ILLUMINA,NHLBI-ESP,PHARMGKB_AB_DME,SNP500CANCER,STEJUSTINE-REGGEN,	2	0.987727

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