Gene Symbol | Chromosome | Start | End | rs ID | Strand | NCBI ref | Observed | Class | Function | Submitter Count | Submitter | Frequency Count | Allele Frequency |
---|
SUGCT | chr7 | 40822035 | 40822036 | rs17770820 | + | A | A/C | single | intron | 5 | 1000GENOMES,BGI,GMI,PERLEGEN,SSMP, | 2 | 0.963793 |
SUGCT | chr7 | 40822120 | 40822121 | rs10231324 | + | T | C/T | single | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.340197 |
SUGCT | chr7 | 40822283 | 40822286 | rs140108836 | + | ATC | -/ATC | deletion | intron | 2 | 1000GENOMES,LUNTER, | 2 | 0.020202 |
SUGCT | chr7 | 40822313 | 40822314 | rs13240894 | + | G | A/G | single | intron | 13 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.331839 |
SUGCT | chr7 | 40822486 | 40822487 | rs17714085 | + | G | G/T | single | intron | 3 | 1000GENOMES,GMI,PERLEGEN, | 2 | 0.987091 |
SUGCT | chr7 | 40822698 | 40822699 | rs78318304 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.016551 |
SUGCT | chr7 | 40822833 | 40822834 | rs4050963 | + | T | C/T | single | intron | 14 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PERLEGEN,PJP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.339768 |
SUGCT | chr7 | 40823943 | 40823944 | rs17688144 | + | G | A/G | single | intron | 3 | 1000GENOMES,ILLUMINA,PERLEGEN, | 2 | 0.019828 |
SUGCT | chr7 | 40824132 | 40824133 | rs1921743 | + | C | C/T | single | intron | 16 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,PERLEGEN,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.759494 |
SUGCT | chr7 | 40824905 | 40824906 | rs17770843 | + | G | A/G | single | intron | 12 | 1000GENOMES,AFFY,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.225709 |
SUGCT | chr7 | 40825555 | 40825556 | rs13225269 | + | A | A/C | single | intron | 8 | 1000GENOMES,ABI,ENSEMBL,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.902473 |
SUGCT | chr7 | 40825624 | 40825625 | rs79387281 | + | G | A/G | single | intron | 3 | 1000GENOMES,ILLUMINA-UK,TISHKOFF, | 2 | 0.011468 |
SUGCT | chr7 | 40825807 | 40825808 | rs7804009 | + | G | A/G | single | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.338772 |
SUGCT | chr7 | 40825818 | 40825819 | rs78155765 | + | C | C/T | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.986510 |
SUGCT | chr7 | 40826040 | 40826041 | rs7807596 | + | C | C/T | single | intron | 18 | 1000GENOMES,ABI,AFFY,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.630874 |
SUGCT | chr7 | 40826270 | 40826271 | rs7808211 | + | G | A/G | single | intron | 16 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PERLEGEN,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.359677 |
SUGCT | chr7 | 40826273 | 40826274 | rs77426612 | + | A | A/C | single | intron | 2 | 1000GENOMES,COMPLETE_GENOMICS, | 2 | 0.972477 |
SUGCT | chr7 | 40826320 | 40826320 | rs11453803 | + | - | -/C | insertion | intron | 11 | 1000GENOMES,ABI,BL,BUSHMAN,DEVINE_LAB,GMI,HGSV,HUMANGENOME_JCVI,LUNTER,PJP,SSMP, | 2 | 0.632326 |
SUGCT | chr7 | 40826334 | 40826335 | rs113719362 | + | A | A/G | single | intron | 2 | 1000GENOMES,COMPLETE_GENOMICS, | 2 | 0.972477 |
SUGCT | chr7 | 40826387 | 40826388 | rs34213068 | + | A | A/T | single | intron | 8 | 1000GENOMES,ABI,ENSEMBL,HGSV,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.897436 |
SUGCT | chr7 | 40826761 | 40826762 | rs1006376 | + | G | G/T | single | intron | 18 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,TSC-CSHL, | 3 | 0.534884 |
SUGCT | chr7 | 40827057 | 40827075 | rs147097338 | + | AAGATCTCAGAGAAA | -/AAGATCTCAGAGA | deletion | intron | 3 | 1000GENOMES,GMI,LUNTER, | 2 | 0.456382 |
SUGCT | chr7 | 40827510 | 40827511 | rs35105954 | + | G | A/G | single | intron | 5 | 1000GENOMES,ABI,BGI,GMI,SSMP, | 2 | 0.037859 |
SUGCT | chr7 | 40827650 | 40827651 | rs34994199 | + | C | A/C | single | intron | 7 | 1000GENOMES,ABI,ENSEMBL,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.084249 |
SUGCT | chr7 | 40827754 | 40827755 | rs1115714 | + | T | C/T | single | intron | 17 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.360920 |
SUGCT | chr7 | 40827961 | 40827962 | rs1115715 | + | A | A/C | single | intron | 17 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,KRIBB_YJKIM,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.634979 |
SUGCT | chr7 | 40828525 | 40828526 | rs115712936 | + | T | G/T | single | intron | 3 | 1000GENOMES,ILLUMINA,SSMP, | 2 | 0.010889 |
SUGCT | chr7 | 40829119 | 40829120 | rs76787453 | + | T | G/T | single | intron | 4 | 1000GENOMES,BGI,GMI,SSMP, | 2 | 0.038294 |
SUGCT | chr7 | 40829421 | 40829422 | rs723837 | + | C | C/T | single | intron | 8 | 1000GENOMES,ABI,BGI,GMI,PERLEGEN,SSMP,TSC-CSHL,WI_SSAHASNP, | 2 | 0.964193 |
SUGCT | chr7 | 40829443 | 40829444 | rs763714 | + | G | A/G | single | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PERLEGEN,PJP,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 2 | 0.398266 |
SUGCT | chr7 | 40829485 | 40829486 | rs723838 | + | G | A/G | single | intron | 16 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.430776 |
SUGCT | chr7 | 40829947 | 40829948 | rs7784052 | + | T | A/T | single | intron | 10 | 1000GENOMES,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,PJP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.235832 |
SUGCT | chr7 | 40830112 | 40830113 | rs7801192 | + | A | A/T | single | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PERLEGEN,PJP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.659666 |
SUGCT | chr7 | 40830304 | 40830305 | rs55641974 | + | G | C/G | single | intron | 5 | 1000GENOMES,GMI,HGSV,SSMP,TISHKOFF, | 2 | 0.064156 |
SUGCT | chr7 | 40830422 | 40830423 | rs75667357 | + | A | A/G | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.948718 |
SUGCT | chr7 | 40830631 | 40830632 | rs17714132 | + | G | A/G | single | intron | 5 | 1000GENOMES,BGI,GMI,PERLEGEN,SSMP, | 2 | 0.033966 |
SUGCT | chr7 | 40830756 | 40830757 | rs7785245 | + | T | C/T | single | intron | 5 | 1000GENOMES,BCM-HGSC-SUB,ILLUMINA,PERLEGEN,WI_SSAHASNP, | 2 | 0.044436 |
SUGCT | chr7 | 40830836 | 40830837 | rs12701835 | + | T | C/T | single | intron | 12 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.341096 |
SUGCT | chr7 | 40831034 | 40831034 | rs202084171 | + | - | -/C | insertion | intron | 1 | 1000GENOMES, | 2 | 0.663912 |
SUGCT | chr7 | 40831035 | 40831035 | rs35014593 | + | - | -/CATT | insertion | intron | 8 | 1000GENOMES,ABI,BL,BUSHMAN,GMI,HUMANGENOME_JCVI,LUNTER,TISHKOFF, | 2 | 0.664070 |
SUGCT | chr7 | 40831134 | 40831135 | rs17439694 | + | G | A/G | single | intron | 4 | 1000GENOMES,ILLUMINA,PERLEGEN,SSMP, | 2 | 0.013158 |
SUGCT | chr7 | 40831295 | 40831296 | rs10231545 | + | G | A/G | single | intron | 14 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,PERLEGEN,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.336000 |
SUGCT | chr7 | 40832143 | 40832144 | rs17688247 | + | C | C/T | single | intron | 10 | 1000GENOMES,ABI,ENSEMBL,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.920010 |
SUGCT | chr7 | 40832365 | 40832366 | rs113528033 | + | A | A/G | single | intron | 2 | 1000GENOMES,BUSHMAN, | 2 | 0.989918 |
SUGCT | chr7 | 40832581 | 40832582 | rs78155316 | + | A | A/G | single | intron | 4 | 1000GENOMES,GMI,SSMP,TISHKOFF, | 2 | 0.939669 |
SUGCT | chr7 | 40832596 | 40832597 | rs1203570 | + | A | A/C | single | intron | 23 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 3 | 0.332986 |
SUGCT | chr7 | 40833302 | 40833303 | rs114295515 | + | C | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.984321 |
SUGCT | chr7 | 40833480 | 40833481 | rs55832912 | + | A | A/G | single | intron | 4 | 1000GENOMES,GMI,HGSV,SSMP, | 2 | 0.939156 |
SUGCT | chr7 | 40833599 | 40833600 | rs35628600 | + | G | A/G | single | intron | 10 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSMP, | 2 | 0.398445 |
SUGCT | chr7 | 40833617 | 40833618 | rs34195626 | + | T | -/T | deletion | intron | 9 | 1000GENOMES,ABI,BILGI_BIOE,BUSHMAN,GMI,HGSV,HUMANGENOME_JCVI,LUNTER,SSMP, | 2 | 0.437672 |
SUGCT | chr7 | 40834715 | 40834716 | rs17688285 | + | T | G/T | single | intron | 12 | 1000GENOMES,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.340197 |
SUGCT | chr7 | 40834824 | 40834824 | rs34859258 | + | - | -/A | insertion | intron | 11 | 1000GENOMES,ABI,BL,BUSHMAN,DEVINE_LAB,GMI,HUMANGENOME_JCVI,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 0.657967 |
SUGCT | chr7 | 40835944 | 40835945 | rs1921746 | + | T | C/T | single | intron | 14 | 1000GENOMES,ABI,AFFY,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PERLEGEN,PJP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.424400 |
SUGCT | chr7 | 40836218 | 40836219 | rs1921747 | + | A | A/G | single | intron | 14 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.661791 |
SUGCT | chr7 | 40836243 | 40836244 | rs1921748 | + | A | A/G | single | intron | 14 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,PJP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.669656 |
SUGCT | chr7 | 40836290 | 40836291 | rs1203569 | + | T | C/T | single | intron | 23 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.583353 |
SUGCT | chr7 | 40836520 | 40836521 | rs17620991 | + | G | C/G | single | intron | 7 | 1000GENOMES,ABI,HUMANGENOME_JCVI,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.069260 |
SUGCT | chr7 | 40837141 | 40837142 | rs17621020 | + | G | C/G | single | intron | 4 | 1000GENOMES,GMI,PERLEGEN,SSMP, | 2 | 0.058759 |
SUGCT | chr7 | 40837313 | 40837314 | rs10226900 | + | A | A/G | single | intron | 11 | 1000GENOMES,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.666667 |
SUGCT | chr7 | 40837501 | 40837502 | rs78803386 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.023955 |
SUGCT | chr7 | 40837735 | 40837736 | rs10227384 | + | A | A/G | single | intron | 9 | 1000GENOMES,BL,ENSEMBL,GMI,HGSV,ILLUMINA,PJP,SSMP,WUGSC_SSAHASNP, | 2 | 0.615949 |
SUGCT | chr7 | 40837736 | 40837737 | rs10272516 | + | T | C/T | single | intron | 8 | 1000GENOMES,BL,ENSEMBL,GMI,HGSV,PJP,SSMP,WUGSC_SSAHASNP, | 2 | 0.380037 |
SUGCT | chr7 | 40837965 | 40837966 | rs71536699 | + | G | A/G | single | intron | 4 | 1000GENOMES,ENSEMBL,HUMANGENOME_JCVI,ILLUMINA, | 2 | 0.021082 |
SUGCT | chr7 | 40838345 | 40838347 | rs35927386 | + | AT | -/AT | deletion | intron | 9 | 1000GENOMES,ABI,BILGI_BIOE,GMI,HUMANGENOME_JCVI,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 0.394037 |
SUGCT | chr7 | 40838349 | 40838350 | rs71965598 | + | A | -/A/AT | in-del | intron | 6 | 1000GENOMES,BCMHGSC_JDW,BUSHMAN,DEVINE_LAB,GMI,PJP, | 2 | 0.338991 |
SUGCT | chr7 | 40838559 | 40838560 | rs17621030 | + | T | C/T | single | intron | 14 | 1000GENOMES,AFFY,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF, | 3 | 0.332849 |
SUGCT | chr7 | 40838613 | 40838614 | rs73689851 | + | C | C/T | single | intron | 4 | 1000GENOMES,ILLUMINA,ILLUMINA-UK,TISHKOFF, | 2 | 0.988532 |
SUGCT | chr7 | 40838956 | 40838957 | rs13237870 | + | C | C/G | single | intron | 13 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.671674 |
SUGCT | chr7 | 40839308 | 40839309 | rs1203572 | - | T | A/C | single | intron | 9 | 1000GENOMES,AFFY,COMPLETE_GENOMICS,KRIBB_YJKIM,KWOK,PERLEGEN,SC_JCM,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.904141 |
SUGCT | chr7 | 40839646 | 40839647 | rs10243080 | + | C | C/T | single | intron | 16 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.667019 |
SUGCT | chr7 | 40839928 | 40839929 | rs117406701 | + | C | C/T | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.986075 |
SUGCT | chr7 | 40840155 | 40840156 | rs10276001 | + | A | A/G | single | intron | 11 | 1000GENOMES,ABI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,PJP,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.664682 |
SUGCT | chr7 | 40840969 | 40840970 | rs17688414 | + | C | C/T | single | intron | 12 | 1000GENOMES,ABI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.660952 |
SUGCT | chr7 | 40841038 | 40841039 | rs35712272 | + | C | C/T | single | intron | 11 | 1000GENOMES,ABI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.661180 |
SUGCT | chr7 | 40841133 | 40841134 | rs73312233 | + | G | G/T | single | intron | 2 | 1000GENOMES,COMPLETE_GENOMICS, | 2 | 0.988532 |
SUGCT | chr7 | 40841571 | 40841572 | rs1203573 | - | A | C/T | single | intron | 21 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KWOK,PERLEGEN,PJP,SC_JCM,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.622940 |
SUGCT | chr7 | 40841618 | 40841619 | rs17714215 | + | C | C/G | single | intron | 5 | 1000GENOMES,BGI,GMI,PERLEGEN,SSMP, | 2 | 0.963362 |
SUGCT | chr7 | 40841727 | 40841728 | rs113038204 | + | T | C/T | single | intron | 2 | 1000GENOMES,BUSHMAN, | 2 | 0.010092 |
SUGCT | chr7 | 40841977 | 40841978 | rs10225209 | + | A | A/G | single | intron | 15 | 1000GENOMES,ABI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.665428 |
SUGCT | chr7 | 40842144 | 40842145 | rs10225445 | + | A | A/T | single | intron | 16 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.665821 |
SUGCT | chr7 | 40842291 | 40842292 | rs1203574 | + | C | C/G | single | intron | 22 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 2 | 0.015320 |
SUGCT | chr7 | 40842336 | 40842337 | rs1203575 | - | T | A/G | single | intron | 21 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KWOK,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 2 | 0.336731 |
SUGCT | chr7 | 40844274 | 40844275 | rs17621117 | + | G | C/G | single | intron | 5 | 1000GENOMES,GMI,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.058157 |
SUGCT | chr7 | 40844462 | 40844463 | rs1974547 | + | G | A/G | single | intron | 16 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PERLEGEN,PJP,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 2 | 0.391985 |
SUGCT | chr7 | 40845801 | 40845802 | rs10268219 | + | C | C/T | single | intron | 17 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.606803 |
SUGCT | chr7 | 40846090 | 40846091 | rs12666544 | + | T | C/T | single | intron | 14 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.334614 |
SUGCT | chr7 | 40846223 | 40846224 | rs117290020 | + | T | A/T | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.013490 |
SUGCT | chr7 | 40846481 | 40846482 | rs55764442 | + | A | A/G | single | intron | 7 | 1000GENOMES,BUSHMAN,GMI,HGSV,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.939422 |
SUGCT | chr7 | 40846594 | 40846595 | rs10272186 | + | C | A/C | single | intron | 12 | 1000GENOMES,AFFY,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,KRIBB_YJKIM,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.231731 |
SUGCT | chr7 | 40846862 | 40846863 | rs79585070 | + | A | A/G | single | intron | 4 | 1000GENOMES,GMI,SSMP,TISHKOFF, | 2 | 0.937086 |
SUGCT | chr7 | 40847220 | 40847221 | rs17770991 | + | C | C/T | single | intron | 12 | 1000GENOMES,AFFY,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.606032 |
SUGCT | chr7 | 40847267 | 40847268 | rs78818493 | + | C | C/T | single | intron | 5 | 1000GENOMES,BUSHMAN,GMI,SSMP,TISHKOFF, | 2 | 0.939450 |
SUGCT | chr7 | 40847482 | 40847483 | rs116907501 | + | G | A/G | single | intron | 2 | 1000GENOMES,GMI, | 2 | 0.041667 |
SUGCT | chr7 | 40847638 | 40847639 | rs55834632 | + | A | A/G | single | intron | 5 | 1000GENOMES,GMI,HGSV,SSMP,TISHKOFF, | 2 | 0.936672 |
SUGCT | chr7 | 40847647 | 40847648 | rs10276629 | + | G | A/G | single | intron | 10 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.334106 |
SUGCT | chr7 | 40847654 | 40847655 | rs76391180 | + | C | C/T | single | intron | 4 | 1000GENOMES,BGI,GMI,SSMP, | 2 | 0.961706 |
SUGCT | chr7 | 40847816 | 40847817 | rs145172435 | + | T | A/T | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.010101 |
SUGCT | chr7 | 40847831 | 40847832 | rs1203576 | + | A | A/T | single | intron | 20 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.227708 |
SUGCT | chr7 | 40847908 | 40847909 | rs2302025 | + | G | A/G | single | intron | 16 | 1000GENOMES,ABI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP,YUSUKE, | 2 | 0.392840 |
SUGCT | chr7 | 40847948 | 40847949 | rs2302026 | + | G | G/T | single | intron | 14 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,PERLEGEN,SSMP,TISHKOFF,WUGSC_SSAHASNP,YUSUKE, | 2 | 0.771368 |
SUGCT | chr7 | 40848205 | 40848206 | rs3815265 | + | T | C/T | single | intron | 17 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP,YUSUKE, | 2 | 0.323921 |
SUGCT | chr7 | 40848402 | 40848403 | rs886831 | + | G | C/G | single | intron | 18 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.332840 |
SUGCT | chr7 | 40848501 | 40848502 | rs78732158 | + | A | A/G | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.937086 |
SUGCT | chr7 | 40848535 | 40848536 | rs111632611 | + | C | C/G | single | intron | 2 | 1000GENOMES,BUSHMAN, | 2 | 0.989918 |
SUGCT | chr7 | 40848551 | 40848552 | rs13225441 | + | A | A/G | single | intron | 7 | 1000GENOMES,ABI,HUMANGENOME_JCVI,ILLUMINA,PJP,SSAHASNP,SSMP, | 2 | 0.983945 |
SUGCT | chr7 | 40848558 | 40848559 | rs4720376 | + | G | A/G | single | intron | 9 | 1000GENOMES,AFFY,BGI,GMI,ILLUMINA,KRIBB_YJKIM,SC_SNP,SSMP,WI_SSAHASNP, | 2 | 0.039515 |
SUGCT | chr7 | 40849152 | 40849153 | rs1921745 | - | G | C/T | single | intron | 12 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,PERLEGEN,PJP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.766934 |
SUGCT | chr7 | 40849939 | 40849940 | rs141786424 | + | A | A/G | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.942608 |
SUGCT | chr7 | 40850195 | 40850196 | rs12540807 | + | T | G/T | single | intron | 5 | 1000GENOMES,ABI,CSHL-HAPMAP,GMI,SSMP, | 2 | 0.038294 |
SUGCT | chr7 | 40850789 | 40850790 | rs62449401 | + | C | C/T | single | intron | 10 | 1000GENOMES,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.661180 |
SUGCT | chr7 | 40851052 | 40851053 | rs2108375 | + | T | C/T | single | intron | 15 | 1000GENOMES,ABI,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.368925 |
SUGCT | chr7 | 40851165 | 40851166 | rs2108376 | + | C | C/T | single | intron | 13 | 1000GENOMES,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.624829 |
SUGCT | chr7 | 40851241 | 40851242 | rs66651482 | + | G | G/T | single | intron | 5 | 1000GENOMES,ENSEMBL,HUMANGENOME_JCVI,SSMP,TISHKOFF, | 2 | 0.915674 |
SUGCT | chr7 | 40851302 | 40851303 | rs76081195 | + | C | C/T | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.936672 |
SUGCT | chr7 | 40851734 | 40851735 | rs67648979 | + | T | C/T | single | intron | 5 | 1000GENOMES,ENSEMBL,HUMANGENOME_JCVI,SSMP,TISHKOFF, | 2 | 0.085701 |
SUGCT | chr7 | 40851921 | 40851922 | rs35146091 | + | A | A/G | single | intron | 12 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.659516 |
SUGCT | chr7 | 40852632 | 40852633 | rs34689844 | + | G | A/G | single | intron | 11 | 1000GENOMES,ABI,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,PJP,SSMP,TISHKOFF, | 2 | 0.375686 |
SUGCT | chr7 | 40853502 | 40853503 | rs35995194 | + | A | A/G | single | intron | 14 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.563213 |
SUGCT | chr7 | 40853513 | 40853514 | rs75535261 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.018728 |
SUGCT | chr7 | 40853852 | 40853853 | rs78107670 | + | A | A/G | single | intron | 4 | 1000GENOMES,BGI,GMI,SSMP, | 2 | 0.962810 |
SUGCT | chr7 | 40854094 | 40854095 | rs113845832 | + | A | A/G | single | intron | 2 | 1000GENOMES,BUSHMAN, | 2 | 0.989918 |
SUGCT | chr7 | 40854156 | 40854156 | rs199748013 | + | - | -/T | insertion | intron | 2 | 1000GENOMES,GMI, | 2 | 0.941690 |
SUGCT | chr7 | 40854303 | 40854304 | rs12701836 | + | C | C/T | single | intron | 14 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.606828 |
SUGCT | chr7 | 40854445 | 40854446 | rs55992488 | + | G | A/G | single | intron | 5 | 1000GENOMES,GMI,HGSV,ILLUMINA,SSMP, | 2 | 0.084034 |
SUGCT | chr7 | 40854634 | 40854635 | rs74758827 | + | G | C/G | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.061258 |
SUGCT | chr7 | 40855328 | 40855329 | rs78487475 | + | G | G/T | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.937086 |
SUGCT | chr7 | 40855719 | 40855720 | rs12701837 | + | A | A/G | single | intron | 17 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.610304 |
SUGCT | chr7 | 40855758 | 40855759 | rs75620270 | + | A | A/G | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.937500 |
SUGCT | chr7 | 40856481 | 40856482 | rs35570092 | + | C | A/C | single | intron | 12 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.329982 |
SUGCT | chr7 | 40856847 | 40856848 | rs10233069 | + | C | A/C | single | intron | 16 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.368498 |
SUGCT | chr7 | 40857120 | 40857121 | rs10252053 | + | T | C/T | single | intron | 15 | 1000GENOMES,AFFY,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.324675 |
SUGCT | chr7 | 40857291 | 40857292 | rs17688549 | + | G | A/G | single | intron | 5 | 1000GENOMES,AFFY,GMI,PERLEGEN,SSMP, | 2 | 0.061679 |
SUGCT | chr7 | 40858003 | 40858004 | rs73125791 | + | C | C/G | single | intron | 7 | 1000GENOMES,COMPLETE_GENOMICS,ENSEMBL,GMI,PJP,SSMP,TISHKOFF, | 2 | 0.771062 |
SUGCT | chr7 | 40858478 | 40858479 | rs62449405 | + | G | G/T | single | intron | 8 | 1000GENOMES,BCMHGSC_JDW,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,SSMP,TISHKOFF, | 2 | 0.765811 |
SUGCT | chr7 | 40858577 | 40858578 | rs13243593 | + | C | A/C | single | intron | 6 | 1000GENOMES,BCMHGSC_JDW,GMI,PJP,SSAHASNP,SSMP, | 2 | 0.371442 |
SUGCT | chr7 | 40858841 | 40858842 | rs181339957 | + | C | A/C | single | intron | 1 | 1000GENOMES, | 2 | 0.011019 |
SUGCT | chr7 | 40859728 | 40859729 | rs148512235 | + | T | G/T | single | intron | 1 | 1000GENOMES, | 2 | 0.013315 |
SUGCT | chr7 | 40859879 | 40859880 | rs140376943 | + | T | -/T | deletion | intron | 5 | 1000GENOMES,BILGI_BIOE,GMI,PJP,SSMP, | 2 | 0.108356 |
SUGCT | chr7 | 40860822 | 40860823 | rs77962412 | + | T | A/T | single | intron | 4 | 1000GENOMES,ENSEMBL,PJP,SSMP, | 2 | 0.016514 |
SUGCT | chr7 | 40860919 | 40860920 | rs142664696 | + | A | A/G | single | intron | 4 | 1000GENOMES,BL,GMI,SSMP, | 2 | 0.803949 |
SUGCT | chr7 | 40861083 | 40861084 | rs149346062 | + | A | A/T | single | intron | 4 | 1000GENOMES,GMI,PJP,SSMP, | 2 | 0.610193 |
SUGCT | chr7 | 40861180 | 40861181 | rs143041394 | + | T | C/T | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.042241 |
SUGCT | chr7 | 40861277 | 40861278 | rs148192245 | + | C | C/T | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.953627 |
SUGCT | chr7 | 40861788 | 40861789 | rs140137796 | + | G | -/G | deletion | intron | 5 | 1000GENOMES,BILGI_BIOE,GMI,LUNTER,SSMP, | 2 | 0.057392 |
SUGCT | chr7 | 40861828 | 40861829 | rs142530316 | + | T | C/T | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.083563 |
SUGCT | chr7 | 40862050 | 40862051 | rs150558358 | + | G | A/G | single | intron | 4 | 1000GENOMES,GMI,MPI_MOLGEN,SSMP, | 2 | 0.062902 |
SUGCT | chr7 | 40862369 | 40862370 | rs10235458 | + | C | C/T | single | intron | 15 | 1000GENOMES,AFFY,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.619390 |
SUGCT | chr7 | 40862444 | 40862445 | rs1203571 | + | A | A/G | single | intron | 8 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA,KWOK,PERLEGEN,SC_JCM,TISHKOFF,TSC-CSHL, | 2 | 0.929562 |
SUGCT | chr7 | 40862762 | 40862763 | rs17688571 | + | T | C/T | single | intron | 9 | 1000GENOMES,AFFY,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.072209 |
SUGCT | chr7 | 40862985 | 40862985 | rs201624198 | + | - | -/T | insertion | intron | 1 | 1000GENOMES, | 2 | 0.983930 |
SUGCT | chr7 | 40863000 | 40863001 | rs77918995 | + | A | A/G | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.946475 |
SUGCT | chr7 | 40863526 | 40863527 | rs73689856 | + | C | C/T | single | intron | 3 | 1000GENOMES,ILLUMINA-UK,TISHKOFF, | 2 | 0.988073 |
SUGCT | chr7 | 40864039 | 40864042 | rs145003095 | + | AGG | -/AGG | deletion | intron | 5 | 1000GENOMES,BILGI_BIOE,GMI,LUNTER,SSMP, | 2 | 0.060147 |
SUGCT | chr7 | 40865218 | 40865219 | rs13230202 | + | T | C/T | single | intron | 10 | 1000GENOMES,ABI,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.129296 |
SUGCT | chr7 | 40865302 | 40865303 | rs10951639 | + | C | C/T | single | intron | 17 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.566064 |
SUGCT | chr7 | 40865509 | 40865510 | rs140208608 | + | C | C/T | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.989899 |
SUGCT | chr7 | 40865582 | 40865583 | rs1029620 | + | G | A/G | single | intron | 16 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.435418 |
SUGCT | chr7 | 40865599 | 40865600 | rs79354326 | + | G | G/T | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.939570 |
SUGCT | chr7 | 40865695 | 40865696 | rs17688583 | + | C | C/T | single | intron | 11 | 1000GENOMES,ABI,AFFY,ENSEMBL,HGSV,HUMANGENOME_JCVI,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.871724 |
SUGCT | chr7 | 40865708 | 40865709 | rs1029621 | + | C | C/T | single | intron | 20 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 2 | 0.701800 |
SUGCT | chr7 | 40866128 | 40866129 | rs145584896 | + | A | A/C | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.989899 |
SUGCT | chr7 | 40866234 | 40866235 | rs1012568 | - | T | A/T | single | intron | 10 | 1000GENOMES,ABI,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.857601 |
SUGCT | chr7 | 40866241 | 40866242 | rs1012567 | - | G | C/G | single | intron | 12 | 1000GENOMES,ABI,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PERLEGEN,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.864401 |
SUGCT | chr7 | 40866662 | 40866663 | rs17688601 | + | C | A/C | single | intron | 10 | 1000GENOMES,ABI,ENSEMBL,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.127451 |
SUGCT | chr7 | 40866845 | 40866846 | rs17688607 | + | G | A/C/G | single | intron | 6 | 1000GENOMES,BCMHGSC_JDW,ENSEMBL,GMI,ILLUMINA,PERLEGEN, | 3 | 0.026258 |
SUGCT | chr7 | 40868140 | 40868141 | rs4723979 | + | C | C/T | single | intron | 18 | 1000GENOMES,ABI,AFFY,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.723138 |
SUGCT | chr7 | 40868430 | 40868431 | rs1013574 | + | C | C/G | single | intron | 18 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 2 | 0.722020 |
SUGCT | chr7 | 40868486 | 40868487 | rs79252614 | + | G | A/G | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.058312 |
SUGCT | chr7 | 40868864 | 40868865 | rs1013575 | + | C | A/C | single | intron | 7 | 1000GENOMES,ABI,BGI,BUSHMAN,GMI,SC_JCM,TSC-CSHL, | 2 | 0.041538 |
SUGCT | chr7 | 40869155 | 40869156 | rs1013576 | + | A | A/T | single | intron | 6 | 1000GENOMES,ABI,BGI,GMI,SSMP,TSC-CSHL, | 2 | 0.962348 |
SUGCT | chr7 | 40869468 | 40869469 | rs80171869 | + | G | C/G | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.011314 |
SUGCT | chr7 | 40869490 | 40869491 | rs1203579 | + | G | A/G | single | intron | 5 | 1000GENOMES,KWOK,SC_JCM,TISHKOFF,TSC-CSHL, | 2 | 0.064950 |
SUGCT | chr7 | 40869753 | 40869754 | rs6462989 | + | A | A/C | single | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.631113 |
SUGCT | chr7 | 40869917 | 40869918 | rs76731615 | + | G | A/G | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.035248 |
SUGCT | chr7 | 40869965 | 40869966 | rs34565813 | + | C | C/T | single | intron | 11 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,PJP,SSMP,TISHKOFF, | 2 | 0.723870 |
SUGCT | chr7 | 40870197 | 40870198 | rs79182998 | + | C | C/T | single | intron | 3 | 1000GENOMES,BGI,GMI, | 2 | 0.962576 |
SUGCT | chr7 | 40870616 | 40870617 | rs10247138 | + | C | C/T | single | intron | 5 | 1000GENOMES,HGSV,PJP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.935434 |
SUGCT | chr7 | 40870770 | 40870771 | rs10247275 | + | C | C/T | single | intron | 14 | 1000GENOMES,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,PERLEGEN,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.758306 |
SUGCT | chr7 | 40870934 | 40870935 | rs10279715 | + | A | A/G | single | intron | 20 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CORNELL,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.570412 |
SUGCT | chr7 | 40871155 | 40871156 | rs12537964 | + | T | A/T | single | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.297345 |
SUGCT | chr7 | 40871385 | 40871386 | rs73689859 | + | A | A/G | single | intron | 4 | 1000GENOMES,ILLUMINA,ILLUMINA-UK,TISHKOFF, | 2 | 0.987615 |
SUGCT | chr7 | 40871684 | 40871685 | rs17714394 | + | A | A/T | single | intron | 5 | 1000GENOMES,GMI,ILLUMINA,PERLEGEN,SSMP, | 2 | 0.940146 |
SUGCT | chr7 | 40871857 | 40871858 | rs13246232 | + | A | A/G | single | intron | 16 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.628854 |
SUGCT | chr7 | 40872173 | 40872174 | rs35107273 | + | C | C/T | single | intron | 8 | 1000GENOMES,ABI,BGI,BUSHMAN,COMPLETE_GENOMICS,GMI,HUMANGENOME_JCVI,ILLUMINA, | 2 | 0.667430 |
SUGCT | chr7 | 40872173 | 40872174 | rs201151778 | + | C | -/C | deletion | intron | 1 | 1000GENOMES, | 2 | 0.332874 |
SUGCT | chr7 | 40872278 | 40872279 | rs76388533 | + | T | C/T | single | intron | 3 | 1000GENOMES,GMI,ILLUMINA-UK, | 2 | 0.068807 |
SUGCT | chr7 | 40872278 | 40872278 | rs199669253 | + | - | -/C | insertion | intron | 1 | 1000GENOMES, | 2 | 0.931589 |
SUGCT | chr7 | 40872427 | 40872428 | rs6949092 | + | T | C/T | single | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.287215 |
SUGCT | chr7 | 40873220 | 40873221 | rs1733483 | - | A | C/T | single | intron | 22 | 1000GENOMES,AFFY,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.627907 |
SUGCT | chr7 | 40873386 | 40873388 | rs35074235 | + | AG | -/AG | deletion | intron | 11 | 1000GENOMES,ABI,BUSHMAN,DEVINE_LAB,GMI,HGSV,HUMANGENOME_JCVI,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 0.227314 |
SUGCT | chr7 | 40873915 | 40873916 | rs9639838 | + | C | C/T | single | intron | 16 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.638564 |
SUGCT | chr7 | 40874130 | 40874131 | rs76254322 | + | G | G/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.979983 |
SUGCT | chr7 | 40874144 | 40874145 | rs7809237 | + | A | A/C | single | intron | 14 | 1000GENOMES,ABI,BGI,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.536775 |
SUGCT | chr7 | 40874375 | 40874376 | rs7809981 | + | G | G/T | single | intron | 17 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PERLEGEN,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.603946 |
SUGCT | chr7 | 40875191 | 40875192 | rs17621345 | + | A | A/C | single | intron | 11 | 1000GENOMES,AFFY,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.855509 |
SUGCT | chr7 | 40875457 | 40875458 | rs17714442 | + | A | A/T | single | intron | 10 | 1000GENOMES,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.685727 |
SUGCT | chr7 | 40875646 | 40875647 | rs74742717 | + | A | A/C | single | intron | 2 | 1000GENOMES,BL, | 2 | 0.976501 |
SUGCT | chr7 | 40876059 | 40876060 | rs12538907 | + | C | C/T | single | intron | 13 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.599387 |
SUGCT | chr7 | 40876079 | 40876080 | rs12538949 | + | G | A/G | single | intron | 12 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,SSMP,TISHKOFF, | 2 | 0.399153 |
SUGCT | chr7 | 40876113 | 40876114 | rs12538933 | + | C | C/T | single | intron | 13 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.588830 |
SUGCT | chr7 | 40876136 | 40876137 | rs12538963 | + | G | A/G | single | intron | 7 | 1000GENOMES,BGI,CSHL-HAPMAP,GMI,ILLUMINA,KRIBB_YJKIM,SSMP, | 2 | 0.042126 |
SUGCT | chr7 | 40876154 | 40876155 | rs12538965 | + | G | A/G | single | intron | 11 | 1000GENOMES,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.401533 |
SUGCT | chr7 | 40876785 | 40876786 | rs1921757 | - | A | C/T | single | intron | 15 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,KRIBB_YJKIM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.391669 |
SUGCT | chr7 | 40877283 | 40877284 | rs117462113 | + | G | A/G | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.026545 |
SUGCT | chr7 | 40877396 | 40877397 | rs10246441 | + | A | A/G | single | intron | 12 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,SC_SNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.603109 |
SUGCT | chr7 | 40877472 | 40877473 | rs12701838 | + | A | A/G | single | intron | 9 | 1000GENOMES,ABI,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.843263 |
SUGCT | chr7 | 40877715 | 40877716 | rs12019351 | + | A | A/C | single | intron | 11 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,SC_SNP,SSMP,TISHKOFF, | 2 | 0.596235 |
SUGCT | chr7 | 40877718 | 40877719 | rs73689862 | + | G | A/G | single | intron | 3 | 1000GENOMES,ILLUMINA-UK,TISHKOFF, | 2 | 0.012385 |
SUGCT | chr7 | 40878017 | 40878018 | rs73689863 | + | G | G/T | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.927523 |
SUGCT | chr7 | 40878205 | 40878206 | rs78490985 | + | C | C/T | single | intron | 4 | 1000GENOMES,BGI,GMI,SSMP, | 2 | 0.959095 |
SUGCT | chr7 | 40878714 | 40878715 | rs76844348 | + | C | C/T | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.925688 |
SUGCT | chr7 | 40878814 | 40878815 | rs55996031 | + | T | G/T | single | intron | 5 | 1000GENOMES,HGSV,ILLUMINA-UK,PJP,TISHKOFF, | 2 | 0.012385 |
SUGCT | chr7 | 40878895 | 40878896 | rs2108377 | + | T | C/T | single | intron | 14 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.465478 |
SUGCT | chr7 | 40879567 | 40879567 | rs139342457 | + | - | -/A | insertion | intron | 1 | 1000GENOMES, | 2 | 0.982094 |
SUGCT | chr7 | 40880199 | 40880200 | rs7777500 | + | G | A/G | single | intron | 9 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,SSMP,WI_SSAHASNP, | 2 | 0.320769 |
SUGCT | chr7 | 40880498 | 40880498 | rs74810691 | + | - | -/T | insertion | intron | 4 | 1000GENOMES,GMI,LUNTER,SSMP, | 2 | 0.695592 |
SUGCT | chr7 | 40880590 | 40880591 | rs1921756 | - | T | A/G | single | intron | 11 | 1000GENOMES,ABI,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,PERLEGEN,SSMP,TSC-CSHL, | 4 | 0.519970 |
SUGCT | chr7 | 40880734 | 40880735 | rs17688697 | + | G | G/T | single | intron | 12 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PERLEGEN,PJP,SSMP, | 2 | 0.524680 |
SUGCT | chr7 | 40881613 | 40881614 | rs1921755 | - | T | A/C | single | intron | 12 | 1000GENOMES,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP,SSMP,TSC-CSHL, | 2 | 0.526803 |
SUGCT | chr7 | 40881937 | 40881938 | rs67369140 | + | G | A/G | single | intron | 6 | 1000GENOMES,BGI,BUSHMAN,COMPLETE_GENOMICS,GMI,SSMP, | 2 | 0.386061 |
SUGCT | chr7 | 40882642 | 40882643 | rs732890 | + | T | C/T | single | intron | 17 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PJP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.357694 |
SUGCT | chr7 | 40882772 | 40882773 | rs758010 | + | A | A/T | single | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.631675 |
SUGCT | chr7 | 40882839 | 40882840 | rs4723981 | + | G | A/G | single | intron | 10 | 1000GENOMES,BGI,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.060329 |
SUGCT | chr7 | 40882875 | 40882876 | rs2005766 | + | C | C/T | single | intron | 11 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.630306 |
SUGCT | chr7 | 40883101 | 40883103 | rs10533463 | + | TG | -/TG | deletion | intron | 4 | 1000GENOMES,BL,DEVINE_LAB,LUNTER, | 2 | 0.356290 |
SUGCT | chr7 | 40883235 | 40883236 | rs4425648 | + | T | G/T | single | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,PJP,SC_JCM,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.365253 |
SUGCT | chr7 | 40883282 | 40883283 | rs4265100 | + | G | C/G | single | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,PJP,SC_JCM,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.363885 |
SUGCT | chr7 | 40883309 | 40883310 | rs4720378 | + | G | C/G | single | intron | 14 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.364797 |
SUGCT | chr7 | 40883433 | 40883434 | rs4723982 | + | G | A/G | single | intron | 14 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.365709 |
SUGCT | chr7 | 40883551 | 40883552 | rs4720379 | + | G | A/G | single | intron | 12 | 1000GENOMES,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.364840 |
SUGCT | chr7 | 40884241 | 40884242 | rs1921754 | - | C | A/G | single | intron | 16 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.364920 |
SUGCT | chr7 | 40884419 | 40884420 | rs1921753 | - | C | A/G | single | intron | 13 | 1000GENOMES,ABI,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,SC_JCM,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.364507 |
SUGCT | chr7 | 40884533 | 40884534 | rs4720380 | + | A | A/G | single | intron | 11 | 1000GENOMES,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.635160 |
SUGCT | chr7 | 40884618 | 40884619 | rs73689864 | + | A | A/T | single | intron | 2 | 1000GENOMES,ILLUMINA-UK, | 2 | 0.988991 |
SUGCT | chr7 | 40884656 | 40884657 | rs55748232 | + | A | A/T | single | intron | 6 | 1000GENOMES,BGI,GMI,HGSV,ILLUMINA-UK,TISHKOFF, | 2 | 0.538991 |
SUGCT | chr7 | 40885093 | 40885094 | rs74471237 | + | G | A/G | single | intron | 3 | 1000GENOMES,ILLUMINA,TISHKOFF, | 2 | 0.021109 |
SUGCT | chr7 | 40885227 | 40885228 | rs4720381 | + | G | G/T | single | intron | 13 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.638686 |
SUGCT | chr7 | 40885357 | 40885358 | rs73689865 | + | T | A/T | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.073394 |
SUGCT | chr7 | 40885512 | 40885513 | rs6952818 | + | T | C/T | single | intron | 14 | 1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.367701 |
SUGCT | chr7 | 40885524 | 40885525 | rs4720382 | + | A | A/G | single | intron | 5 | 1000GENOMES,BGI,GMI,SSMP,WI_SSAHASNP, | 2 | 0.959530 |
SUGCT | chr7 | 40885657 | 40885658 | rs6952995 | + | T | C/T | single | intron | 13 | 1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.365174 |
SUGCT | chr7 | 40885662 | 40885663 | rs6970936 | + | G | A/G | single | intron | 12 | 1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.386654 |
SUGCT | chr7 | 40885830 | 40885831 | rs12531482 | + | G | A/G | single | intron | 6 | 1000GENOMES,BGI,CSHL-HAPMAP,GMI,SSAHASNP,SSMP, | 2 | 0.040470 |
SUGCT | chr7 | 40885933 | 40885934 | rs2876979 | + | G | A/G | single | intron | 16 | 1000GENOMES,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,ILLUMINA,KRIBB_YJKIM,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 2 | 0.357897 |
SUGCT | chr7 | 40886575 | 40886576 | rs7808121 | + | C | C/T | single | intron | 14 | 1000GENOMES,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PJP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.640816 |
SUGCT | chr7 | 40886679 | 40886680 | rs77686906 | + | A | A/C | single | intron | 4 | 1000GENOMES,BGI,GMI,SSMP, | 2 | 0.959530 |
SUGCT | chr7 | 40886715 | 40886716 | rs7808678 | + | G | A/G | single | intron | 12 | 1000GENOMES,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,PJP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.364840 |
SUGCT | chr7 | 40886757 | 40886758 | rs7808304 | + | A | A/G | single | intron | 14 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.635036 |
SUGCT | chr7 | 40886853 | 40886853 | rs10676694 | + | - | -/ACTC | insertion | intron | 5 | 1000GENOMES,BL,BUSHMAN,DEVINE_LAB,LUNTER, | 2 | 0.542661 |
SUGCT | chr7 | 40886854 | 40886854 | rs35114282 | + | - | -/ACTC/CT | insertion | intron | 3 | 1000GENOMES,DEVINE_LAB,SSMP, | 2 | 0.560606 |
SUGCT | chr7 | 40886998 | 40887002 | rs201875749 | + | TTTC | -/TTTC | deletion | intron | 1 | 1000GENOMES, | 2 | 0.340680 |
SUGCT | chr7 | 40887007 | 40887008 | rs148228342 | + | T | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.016070 |
SUGCT | chr7 | 40887410 | 40887411 | rs28621645 | + | A | A/G | single | intron | 13 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.635036 |
SUGCT | chr7 | 40887694 | 40887695 | rs12532916 | + | G | A/G | single | intron | 6 | 1000GENOMES,ABI,BGI,CSHL-HAPMAP,GMI,SSMP, | 2 | 0.039486 |
SUGCT | chr7 | 40887705 | 40887706 | rs10237052 | + | C | C/T | single | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.634747 |
SUGCT | chr7 | 40887744 | 40887745 | rs10266350 | + | A | A/G | single | intron | 12 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.692132 |
SUGCT | chr7 | 40887862 | 40887869 | rs112291991 | + | ACCTGGC | -/ACCTGGC | deletion | intron | 5 | 1000GENOMES,BUSHMAN,GMI,LUNTER,PJP, | 2 | 0.361009 |
SUGCT | chr7 | 40888048 | 40888049 | rs4050966 | + | G | A/G | single | intron | 18 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 2 | 0.460520 |
SUGCT | chr7 | 40888597 | 40888598 | rs3801239 | + | G | A/G | single | intron | 11 | 1000GENOMES,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.322171 |
SUGCT | chr7 | 40888933 | 40888934 | rs73689870 | + | T | C/T | single | intron | 7 | 1000GENOMES,BUSHMAN,GMI,ILLUMINA,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.095784 |
SUGCT | chr7 | 40889039 | 40889040 | rs6963162 | + | G | A/G | single | intron | 14 | 1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,PJP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.365253 |
SUGCT | chr7 | 40889555 | 40889556 | rs55836921 | + | C | C/T | single | intron | 5 | 1000GENOMES,GMI,HGSV,ILLUMINA-UK,SSMP, | 2 | 0.926147 |
SUGCT | chr7 | 40889984 | 40889985 | rs10226883 | + | G | A/G | single | intron | 13 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA,ILLUMINA-UK,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.461855 |
SUGCT | chr7 | 40890669 | 40890670 | rs10227436 | + | C | C/T | single | intron | 14 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.536252 |
SUGCT | chr7 | 40891125 | 40891126 | rs4085300 | - | G | C/T | single | intron | 14 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,PERLEGEN,SC_JCM,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 3 | 0.653313 |
SUGCT | chr7 | 40891259 | 40891260 | rs7806152 | + | C | C/T | single | intron | 7 | 1000GENOMES,AFFY,BUSHMAN,ILLUMINA,KRIBB_YJKIM,TISHKOFF,WI_SSAHASNP, | 2 | 0.987901 |
SUGCT | chr7 | 40891683 | 40891684 | rs10231596 | + | C | C/T | single | intron | 17 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,KRIBB_YJKIM,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.636502 |
SUGCT | chr7 | 40891811 | 40891812 | rs6957123 | + | T | G/T | single | intron | 16 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,KRIBB_YJKIM,PJP,SSMP,TISHKOFF, | 2 | 0.363359 |
SUGCT | chr7 | 40892227 | 40892228 | rs17714523 | + | G | G/T | single | intron | 6 | 1000GENOMES,BGI,BUSHMAN,GMI,ILLUMINA,PERLEGEN, | 2 | 0.951131 |
SUGCT | chr7 | 40892323 | 40892324 | rs17171784 | + | G | G/T | single | intron | 4 | 1000GENOMES,BUSHMAN,PERLEGEN,TISHKOFF, | 2 | 0.978036 |
SUGCT | chr7 | 40892727 | 40892728 | rs4723983 | + | A | A/G | single | intron | 18 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.533042 |
SUGCT | chr7 | 40892999 | 40893000 | rs4720383 | + | G | A/G | single | intron | 8 | 1000GENOMES,ABI,BGI,CSHL-HAPMAP,GMI,SSAHASNP,SSMP,WI_SSAHASNP, | 2 | 0.039450 |
SUGCT | chr7 | 40893274 | 40893275 | rs112783894 | + | C | C/T | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.977982 |
SUGCT | chr7 | 40893529 | 40893530 | rs56190843 | + | T | -/T | deletion | intron | 5 | 1000GENOMES,GMI,HGSV,LUNTER,SSMP, | 2 | 0.051883 |
SUGCT | chr7 | 40893994 | 40893998 | rs145101175 | + | TTTC | -/TTTC | deletion | intron | 1 | 1000GENOMES, | 2 | 0.113866 |
SUGCT | chr7 | 40894009 | 40894018 | rs200574362 | + | CTTTCTTTC | -/CTTTCTTTC | deletion | intron | 1 | 1000GENOMES, | 2 | 0.468779 |
SUGCT | chr7 | 40894013 | 40894018 | rs200124150 | + | CTTTC | -/CTTTC | deletion | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.480257 |
SUGCT | chr7 | 40894017 | 40894018 | rs72153686 | + | C | -/C | deletion | intron | 6 | 1000GENOMES,BILGI_BIOE,BUSHMAN,DEVINE_LAB,LUNTER,PJP, | 2 | 0.501835 |
SUGCT | chr7 | 40894082 | 40894083 | rs62449429 | + | C | C/T | single | intron | 3 | 1000GENOMES,BCMHGSC_JDW,ENSEMBL, | 2 | 0.960092 |
SUGCT | chr7 | 40894083 | 40894087 | rs150153135 | + | TCTT | -/TCTT | deletion | intron | 2 | 1000GENOMES,LUNTER, | 2 | 0.038108 |
SUGCT | chr7 | 40894100 | 40894104 | rs199847011 | + | CTTG | -/CTTG | deletion | intron | 1 | 1000GENOMES, | 2 | 0.031221 |
SUGCT | chr7 | 40894467 | 40894468 | rs6952729 | + | G | C/G | single | intron | 12 | 1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,SC_SNP,SSMP,TISHKOFF, | 2 | 0.311070 |
SUGCT | chr7 | 40894701 | 40894702 | rs1921751 | - | C | A/G | single | intron | 8 | 1000GENOMES,ABI,BGI,GMI,PERLEGEN,SC_JCM,SSMP,TSC-CSHL, | 2 | 0.037757 |
SUGCT | chr7 | 40895185 | 40895186 | rs17621508 | + | T | A/T | single | intron | 6 | 1000GENOMES,GMI,HGSV,ILLUMINA-UK,PERLEGEN,SSMP, | 2 | 0.075073 |
SUGCT | chr7 | 40896713 | 40896714 | rs10268023 | + | T | A/T | single | intron | 11 | 1000GENOMES,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,PERLEGEN,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.310997 |
SUGCT | chr7 | 40897003 | 40897004 | rs1203577 | + | T | C/T | single | intron | 8 | 1000GENOMES,AFFY,BCM_SSAHASNP,ILLUMINA,KRIBB_YJKIM,KWOK,SC_JCM,TISHKOFF, | 2 | 0.085264 |
SUGCT | chr7 | 40897266 | 40897267 | rs10255986 | + | C | C/T | single | intron | 15 | 1000GENOMES,AFFY,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.682119 |
SUGCT | chr7 | 40897975 | 40897976 | rs28583134 | + | T | C/T | single | intron | 9 | 1000GENOMES,BL,COMPLETE_GENOMICS,GMI,HGSV,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.311070 |
SUGCT | chr7 | 40898069 | 40898070 | rs17171785 | + | C | C/T | single | intron | 7 | 1000GENOMES,AFFY,BUSHMAN,ILLUMINA,KRIBB_YJKIM,PERLEGEN,TISHKOFF, | 2 | 0.971154 |
SUGCT | chr7 | 40898137 | 40898138 | rs1203578 | + | T | C/T | single | intron | 21 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.548742 |
SUGCT | chr7 | 40898681 | 40898681 | rs201150719 | + | - | -/A | insertion | intron | 2 | 1000GENOMES,LUNTER, | 2 | 0.981635 |
SUGCT | chr7 | 40899142 | 40899143 | rs73312299 | + | G | C/G | single | intron | 4 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.015110 |
SUGCT | chr7 | 40899645 | 40899646 | rs6971120 | + | T | C/T | single | intron | 17 | 1000GENOMES,ABI,AFFY,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.448091 |
SUGCT | chr7 | 40899651 | 40899652 | rs73689875 | + | C | C/T | single | intron | 6 | 1000GENOMES,BUSHMAN,GMI,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.904675 |
SUGCT | chr7 | 40899966 | 40899967 | rs2010706 | + | G | C/G | single | coding-synon | 22 | 1000GENOMES,ABI,APPLERA_GI,BCM_SSAHASNP,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,ILLUMINA-UK,NHLBI-ESP,PJP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP,WUGSC_SSAHASNP,YUSUKE, | 2 | 0.444095 |
SUGCT | chr7 | 40899987 | 40899988 | rs35870589 | + | G | A/G | single | coding-synon | 1 | APPLERA_GI, | 2 | 0.012820 |
SUGCT | chr7 | 40900174 | 40900175 | rs699484 | + | A | A/G | single | untranslated-3 | 21 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,LEE,PERLEGEN,PJP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP,YUSUKE, | 3 | 0.543920 |
SUGCT | chr7 | 40900229 | 40900230 | rs2302027 | + | G | A/G | single | untranslated-3 | 11 | 1000GENOMES,ABI,BGI,CSHL-HAPMAP,GMI,ILLUMINA,PERLEGEN,PJP,SSMP,WI_SSAHASNP,YUSUKE, | 2 | 0.035575 |
SUGCT | chr7 | 40900339 | 40900340 | rs1053953 | + | T | A/T | single | untranslated-3 | 18 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,ILLUMINA-UK,LEE,PJP,SSMP,TSC-CSHL,WI_SSAHASNP,WUGSC_SSAHASNP,YUSUKE, | 2 | 0.449474 |
TXNRD2 | chr22 | 19863141 | 19863142 | rs1044732 | - | T | A/G | single | untranslated-3 | 14 | 1000GENOMES,ABI,COMPLETE_GENOMICS,ENSEMBL,ILLUMINA,KRIBB_YJKIM,LEE,PERLEGEN,PJP,SEQUENOM,SI_EXO,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.910889 |
TXNRD2 | chr22 | 19863592 | 19863593 | rs16984299 | + | T | C/T | single | intron | 16 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.281693 |
TXNRD2 | chr22 | 19863613 | 19863614 | rs34207608 | + | G | A/G | single | intron | 8 | 1000GENOMES,ABI,BCM-HGSC-SUB,GMI,HUMANGENOME_JCVI,ILLUMINA,PJP,TISHKOFF, | 2 | 0.039450 |
TXNRD2 | chr22 | 19863637 | 19863638 | rs58210408 | + | C | C/T | single | intron | 7 | 1000GENOMES,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.796059 |
TXNRD2 | chr22 | 19863727 | 19863728 | rs113206516 | + | G | G/T | single | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA, | 2 | 0.954128 |
TXNRD2 | chr22 | 19863926 | 19863927 | rs80053274 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.035714 |
TXNRD2 | chr22 | 19864017 | 19864018 | rs116012329 | + | A | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.982578 |
TXNRD2 | chr22 | 19864071 | 19864072 | rs73877383 | + | G | A/G | single | intron | 3 | 1000GENOMES,ILLUMINA-UK,SSMP, | 2 | 0.024771 |
TXNRD2 | chr22 | 19864088 | 19864089 | rs67937222 | + | C | C/T | single | intron | 5 | 1000GENOMES,BCM-HGSC-SUB,COMPLETE_GENOMICS,HUMANGENOME_JCVI,TISHKOFF, | 2 | 0.962420 |
TXNRD2 | chr22 | 19864238 | 19864239 | rs7288061 | + | C | C/T | single | intron | 9 | 1000GENOMES,BCM-HGSC-SUB,BCM_SSAHASNP,COMPLETE_GENOMICS,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.915803 |
TXNRD2 | chr22 | 19864251 | 19864252 | rs7288170 | + | C | C/G | single | intron | 11 | 1000GENOMES,BCM-HGSC-SUB,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.735248 |
TXNRD2 | chr22 | 19864334 | 19864335 | rs7287073 | + | G | A/G | single | intron | 9 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,COMPLETE_GENOMICS,GMI,HUMANGENOME_JCVI,SSMP,TISHKOFF, | 2 | 0.086159 |
TXNRD2 | chr22 | 19864393 | 19864394 | rs73877384 | + | C | C/T | single | intron | 5 | 1000GENOMES,GMI,ILLUMINA,ILLUMINA-UK,SSMP, | 2 | 0.970642 |
TXNRD2 | chr22 | 19864959 | 19864960 | rs73381892 | + | C | C/T | single | intron | 3 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS, | 2 | 0.953297 |
TXNRD2 | chr22 | 19865128 | 19865129 | rs73877385 | + | A | A/G | single | intron | 4 | 1000GENOMES,ILLUMINA,ILLUMINA-UK,SSMP, | 2 | 0.969725 |
TXNRD2 | chr22 | 19865358 | 19865359 | rs16984300 | + | C | C/T | single | intron | 4 | 1000GENOMES,ILLUMINA,PERLEGEN,TISHKOFF, | 2 | 0.986207 |
TXNRD2 | chr22 | 19865868 | 19865869 | rs113605285 | + | T | C/T | single | intron | 6 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,ILLUMINA,NHLBI-ESP,TISHKOFF, | 2 | 0.082418 |
TXNRD2 | chr22 | 19866193 | 19866194 | rs5993849 | + | G | C/G | single | intron | 15 | 1000GENOMES,ABI,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_SNP,SI_EXO,SSMP,TISHKOFF, | 2 | 0.256843 |
TXNRD2 | chr22 | 19866461 | 19866462 | rs3827288 | + | C | C/T | single | intron | 11 | 1000GENOMES,ABI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,ILLUMINA,PERLEGEN,SC_SNP,SSMP,YUSUKE, | 2 | 0.743453 |
TXNRD2 | chr22 | 19866944 | 19866945 | rs79682614 | + | C | C/T | single | intron | 4 | 1000GENOMES,GMI,SSMP,TISHKOFF, | 2 | 0.907230 |
TXNRD2 | chr22 | 19867087 | 19867088 | rs150129323 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.021579 |
TXNRD2 | chr22 | 19867144 | 19867145 | rs138805648 | + | G | C/G | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.031221 |
TXNRD2 | chr22 | 19867188 | 19867189 | rs13054371 | + | T | C/T | single | intron | 13 | 1000GENOMES,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.545349 |
TXNRD2 | chr22 | 19867268 | 19867269 | rs35687671 | + | G | A/G | single | intron | 6 | 1000GENOMES,ABI,BCM-HGSC-SUB,COMPLETE_GENOMICS,ENSEMBL,HUMANGENOME_JCVI, | 2 | 0.031565 |
TXNRD2 | chr22 | 19867275 | 19867276 | rs34175429 | + | T | C/T | single | intron | 9 | 1000GENOMES,ABI,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,SSMP, | 2 | 0.251142 |
TXNRD2 | chr22 | 19867401 | 19867402 | rs117304417 | + | G | A/G | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.014360 |
TXNRD2 | chr22 | 19867468 | 19867469 | rs11913382 | + | A | A/G | single | intron | 4 | 1000GENOMES,ABI,CSHL-HAPMAP,ILLUMINA, | 2 | 0.988068 |
TXNRD2 | chr22 | 19867503 | 19867504 | rs76576226 | + | A | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.968206 |
TXNRD2 | chr22 | 19867538 | 19867539 | rs11913319 | + | C | C/G | single | intron | 9 | 1000GENOMES,ABI,BCM-HGSC-SUB,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HUMANGENOME_JCVI,SSMP,TISHKOFF, | 2 | 0.735588 |
TXNRD2 | chr22 | 19867770 | 19867771 | rs1139795 | - | C | A/G | single | coding-synon | 20 | 1000GENOMES,ABI,APPLERA_GI,BCM-HGSC-SUB,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,LEE,NHLBI-ESP,PJP,SEATTLESEQ,SEQUENOM,SI_EXO,SSMP,TISHKOFF, | 2 | 0.217342 |
TXNRD2 | chr22 | 19867913 | 19867914 | rs13054713 | + | C | A/C | single | intron | 12 | 1000GENOMES,ABI,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,HUMANGENOME_JCVI,PJP,SI_EXO,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.122129 |
TXNRD2 | chr22 | 19868217 | 19868218 | rs1139793 | + | A | A/G | single | missense | 31 | 1000GENOMES,AFFY,AFFY_GWHS,APPLERA_GI,BCMHGSC_JDW,BGI,BL,BUSHMAN,CGAP-GAI,CGM_KYOTO,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,EXOME_CHIP,GMI,HGBASE,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,LEE,NHLBI-ESP,PERLEGEN,PJP,SC_SNP,SEATTLESEQ,SSAHASNP,SSMP,TISHKOFF,YUSUKE, | 5 | 0.247231 |
TXNRD2 | chr22 | 19868227 | 19868228 | rs35544159 | - | G | C/T | single | coding-synon | 6 | 1000GENOMES,APPLERA_GI,CLINSEQ_SNP,ILLUMINA-UK,NHLBI-ESP,SEATTLESEQ, | 2 | 0.986312 |
TXNRD2 | chr22 | 19868255 | 19868256 | rs34827823 | + | G | -/G | deletion | intron | 9 | 1000GENOMES,ABI,BUSHMAN,CGM_KYOTO,DEVINE_LAB,GMI,LUNTER,SSMP,TISHKOFF, | 2 | 0.157798 |
TXNRD2 | chr22 | 19868552 | 19868553 | rs34489078 | + | G | A/G | single | intron | 7 | 1000GENOMES,ABI,BCM-HGSC-SUB,COMPLETE_GENOMICS,GMI,SI_EXO,TISHKOFF, | 2 | 0.036697 |
TXNRD2 | chr22 | 19868677 | 19868678 | rs45465601 | + | T | C/T | single | intron | 13 | 1000GENOMES,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,PJP,SI_EXO,SSMP,TISHKOFF, | 2 | 0.249429 |
TXNRD2 | chr22 | 19868684 | 19868685 | rs115189901 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.010017 |
TXNRD2 | chr22 | 19868925 | 19868926 | rs34318203 | + | G | -/G | deletion | intron | 10 | 1000GENOMES,ABI,BILGI_BIOE,BUSHMAN,DEVINE_LAB,HGSV,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 0.249771 |
TXNRD2 | chr22 | 19868950 | 19868951 | rs33997573 | + | C | C/T | single | intron | 11 | 1000GENOMES,ABI,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,HGSV,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.872263 |
TXNRD2 | chr22 | 19869024 | 19869025 | rs75598332 | + | C | A/C | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.010017 |
TXNRD2 | chr22 | 19869209 | 19869210 | rs34820460 | + | G | A/G | single | intron | 13 | 1000GENOMES,ABI,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSMP,TISHKOFF, | 2 | 0.197812 |
TXNRD2 | chr22 | 19869262 | 19869263 | rs16984307 | + | T | G/T | single | intron | 5 | 1000GENOMES,AFFY,KRIBB_YJKIM,PERLEGEN,TISHKOFF, | 2 | 0.074401 |
TXNRD2 | chr22 | 19869303 | 19869304 | rs60832012 | + | C | C/T | single | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,HGSV,TISHKOFF, | 2 | 0.989450 |
TXNRD2 | chr22 | 19869450 | 19869451 | rs114311075 | + | C | C/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.975174 |
TXNRD2 | chr22 | 19869604 | 19869605 | rs76038805 | + | G | G/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.989983 |
TXNRD2 | chr22 | 19869702 | 19869703 | rs5993850 | + | C | C/T | single | intron | 12 | 1000GENOMES,ABI,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA-UK,KRIBB_YJKIM,SC_SNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.764135 |
TXNRD2 | chr22 | 19869845 | 19869846 | rs112313554 | + | C | C/T | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.987156 |
TXNRD2 | chr22 | 19869941 | 19869942 | rs138288542 | + | G | G/T | single | intron | 1 | 1000GENOMES, | 2 | 0.979339 |
TXNRD2 | chr22 | 19870035 | 19870036 | rs8141451 | + | C | C/G | single | intron | 13 | 1000GENOMES,ABI,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.749315 |
TXNRD2 | chr22 | 19870059 | 19870060 | rs75996154 | + | C | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.986934 |
TXNRD2 | chr22 | 19870060 | 19870061 | rs35951399 | + | G | A/G | single | intron | 7 | 1000GENOMES,ABI,BCM-HGSC-SUB,COMPLETE_GENOMICS,GMI,HUMANGENOME_JCVI,TISHKOFF, | 2 | 0.037122 |
TXNRD2 | chr22 | 19870071 | 19870072 | rs73383820 | + | C | C/T | single | intron | 4 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.982593 |
TXNRD2 | chr22 | 19870146 | 19870147 | rs8141610 | + | C | C/T | single | intron | 13 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.872098 |
TXNRD2 | chr22 | 19870330 | 19870331 | rs73383823 | + | A | A/G | single | intron | 2 | 1000GENOMES,COMPLETE_GENOMICS, | 2 | 0.989450 |
TXNRD2 | chr22 | 19870830 | 19870831 | rs2239893 | - | C | A/G | single | intron | 19 | 1000GENOMES,ABI,BCM-HGSC-SUB,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PJP,SC_SNP,SI_EXO,SSAHASNP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.237776 |
TXNRD2 | chr22 | 19870897 | 19870898 | rs61736941 | + | G | A/G | single | missense | 2 | CORNELL,NHLBI-ESP, | 2 | 0.013513 |
TXNRD2 | chr22 | 19871096 | 19871097 | rs13057374 | + | C | C/G | single | intron | 12 | ABI,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.428571 |
TXNRD2 | chr22 | 19871197 | 19871198 | rs114054391 | + | C | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.971690 |
TXNRD2 | chr22 | 19871203 | 19871204 | rs5992492 | + | T | C/T | single | intron | 14 | 1000GENOMES,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.508204 |
TXNRD2 | chr22 | 19871473 | 19871473 | rs200781717 | + | - | -/AG | insertion | intron | 1 | 1000GENOMES, | 2 | 0.952709 |
TXNRD2 | chr22 | 19871552 | 19871553 | rs5993851 | + | C | C/T | single | intron | 11 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.751601 |
TXNRD2 | chr22 | 19871553 | 19871554 | rs139656382 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.016529 |
TXNRD2 | chr22 | 19871601 | 19871602 | rs149740582 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.014233 |
TXNRD2 | chr22 | 19871690 | 19871691 | rs12158214 | + | C | C/T | single | intron | 16 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,HUMANGENOME_JCVI,KRIBB_YJKIM,PERLEGEN,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.804560 |
TXNRD2 | chr22 | 19871777 | 19871778 | rs3788305 | + | A | A/G | single | intron | 21 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,YUSUKE, | 3 | 0.460524 |
TXNRD2 | chr22 | 19872008 | 19872009 | rs3788306 | + | T | C/T | single | intron | 18 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SC_SNP,SSMP,TISHKOFF,WI_SSAHASNP,YUSUKE, | 3 | 0.238701 |
TXNRD2 | chr22 | 19872166 | 19872167 | rs75188079 | + | C | A/C | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.053525 |
TXNRD2 | chr22 | 19872169 | 19872170 | rs34249993 | + | G | G/T | single | intron | 10 | 1000GENOMES,ABI,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,HUMANGENOME_JCVI,SSMP,TISHKOFF, | 2 | 0.875799 |
TXNRD2 | chr22 | 19872644 | 19872645 | rs35934224 | + | C | C/T | single | intron | 11 | 1000GENOMES,ABI,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.827397 |
TXNRD2 | chr22 | 19872934 | 19872935 | rs73148965 | + | G | A/G | single | intron | 7 | 1000GENOMES,BCM-HGSC-SUB,COMPLETE_GENOMICS,ENSEMBL,GMI,SSMP,TISHKOFF, | 2 | 0.085243 |
TXNRD2 | chr22 | 19872997 | 19872998 | rs35942596 | + | T | -/T | deletion | intron | 7 | 1000GENOMES,ABI,DEVINE_LAB,HUMANGENOME_JCVI,LUNTER,SSMP,TISHKOFF, | 2 | 0.183486 |
TXNRD2 | chr22 | 19873356 | 19873357 | rs2073750 | - | C | A/G | single | intron | 18 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGBASE,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SC_SNP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.406294 |
TXNRD2 | chr22 | 19873605 | 19873606 | rs117016540 | + | C | C/T | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.988686 |
TXNRD2 | chr22 | 19873796 | 19873797 | rs56046137 | + | G | A/G | single | intron | 9 | 1000GENOMES,BCMHGSC_JDW,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF, | 2 | 0.166209 |
TXNRD2 | chr22 | 19874181 | 19874182 | rs73877387 | + | C | C/T | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.969725 |
TXNRD2 | chr22 | 19874208 | 19874209 | rs9606171 | + | T | C/T | single | intron | 7 | 1000GENOMES,AFFY,GMI,KRIBB_YJKIM,SC_SNP,SSMP,TISHKOFF, | 2 | 0.108535 |
TXNRD2 | chr22 | 19874484 | 19874485 | rs9606172 | + | G | A/G | single | intron | 2 | 1000GENOMES,SC_SNP, | 2 | 0.026980 |
TXNRD2 | chr22 | 19874545 | 19874546 | rs73383845 | + | C | C/T | single | intron | 4 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.984876 |
TXNRD2 | chr22 | 19874717 | 19874718 | rs73877388 | + | G | A/G | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.031651 |
TXNRD2 | chr22 | 19874755 | 19874756 | rs34468574 | + | C | C/T | single | intron | 10 | 1000GENOMES,ABI,BCM-HGSC-SUB,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,PJP,TISHKOFF, | 2 | 0.956084 |
TXNRD2 | chr22 | 19874954 | 19874955 | rs117446426 | + | C | C/T | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.988686 |
TXNRD2 | chr22 | 19875094 | 19875095 | rs79954504 | + | C | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.979530 |
TXNRD2 | chr22 | 19875421 | 19875422 | rs9618712 | + | C | C/T | single | intron | 7 | 1000GENOMES,AFFY,BUSHMAN,KRIBB_YJKIM,PERLEGEN,SC_SNP,TISHKOFF, | 2 | 0.958171 |
TXNRD2 | chr22 | 19876332 | 19876333 | rs73877389 | + | G | A/G | single | intron | 5 | 1000GENOMES,GMI,ILLUMINA,ILLUMINA-UK,SSMP, | 2 | 0.030734 |
TXNRD2 | chr22 | 19876766 | 19876767 | rs113109341 | + | C | C/T | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.982110 |
TXNRD2 | chr22 | 19876860 | 19876861 | rs11089317 | + | T | C/T | single | intron | 15 | 1000GENOMES,ABI,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,PJP,SC_SNP,SSAHASNP,SSMP, | 2 | 0.300913 |
TXNRD2 | chr22 | 19876996 | 19876997 | rs12106645 | + | G | A/G | single | intron | 3 | 1000GENOMES,BUSHMAN,SC_SNP, | 2 | 0.084862 |
TXNRD2 | chr22 | 19877048 | 19877049 | rs34970138 | + | G | A/G | single | intron | 10 | 1000GENOMES,ABI,BCM-HGSC-SUB,BL,BUSHMAN,ENSEMBL,GMI,HUMANGENOME_JCVI,SSMP,TISHKOFF, | 2 | 0.167429 |
TXNRD2 | chr22 | 19877175 | 19877175 | rs59971562 | + | - | -/TT/TTATTA | insertion | intron,cds-indel | 2 | 1000GENOMES,HGSV, | 2 | 0.925620 |
TXNRD2 | chr22 | 19877510 | 19877511 | rs9606173 | + | A | A/T | single | intron | 13 | 1000GENOMES,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,PJP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.822290 |
TXNRD2 | chr22 | 19877752 | 19877753 | rs116474580 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.051829 |
TXNRD2 | chr22 | 19877760 | 19877761 | rs56114807 | + | C | C/T | single | intron | 5 | 1000GENOMES,GMI,HGSV,ILLUMINA-UK,SSMP, | 2 | 0.970183 |
TXNRD2 | chr22 | 19877856 | 19877857 | rs34606353 | + | T | C/T | single | intron | 7 | 1000GENOMES,ABI,BCM-HGSC-SUB,BUSHMAN,GMI,HUMANGENOME_JCVI,TISHKOFF, | 2 | 0.040788 |
TXNRD2 | chr22 | 19878008 | 19878009 | rs9617844 | + | G | A/G | single | intron | 4 | 1000GENOMES,HGSV,SC_SNP,TISHKOFF, | 2 | 0.033972 |
TXNRD2 | chr22 | 19878361 | 19878362 | rs1548357 | + | T | C/T | single | intron | 17 | 1000GENOMES,ABI,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PJP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP,YUSUKE, | 2 | 0.316529 |
TXNRD2 | chr22 | 19878513 | 19878514 | rs1015471 | - | G | C/T | single | intron | 13 | 1000GENOMES,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA,KRIBB_YJKIM,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP,YUSUKE, | 2 | 0.668192 |
TXNRD2 | chr22 | 19878542 | 19878543 | rs73877390 | + | G | C/G | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.031193 |
TXNRD2 | chr22 | 19878751 | 19878752 | rs3827289 | + | A | A/T | single | intron | 13 | 1000GENOMES,ABI,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,ILLUMINA,PJP,SSMP,TISHKOFF,WI_SSAHASNP,YUSUKE, | 2 | 0.658087 |
TXNRD2 | chr22 | 19879019 | 19879020 | rs3788309 | + | G | A/G | single | intron | 8 | 1000GENOMES,AFFY,GMI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,SSMP,YUSUKE, | 2 | 0.040010 |
TXNRD2 | chr22 | 19879597 | 19879598 | rs79062175 | + | C | C/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.960801 |
TXNRD2 | chr22 | 19879636 | 19879637 | rs3804047 | - | A | C/T | single | intron | 12 | 1000GENOMES,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,SC_SNP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.342472 |
TXNRD2 | chr22 | 19879937 | 19879938 | rs5993853 | + | T | C/T | single | intron | 20 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.857486 |
TXNRD2 | chr22 | 19880056 | 19880057 | rs56132768 | + | G | C/G | single | intron | 8 | 1000GENOMES,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.206960 |
TXNRD2 | chr22 | 19880254 | 19880255 | rs74746057 | + | G | C/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.037892 |
TXNRD2 | chr22 | 19880339 | 19880340 | rs3788310 | + | G | A/G | single | intron | 9 | 1000GENOMES,BL,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SC_SNP,SSMP,YUSUKE, | 2 | 0.095144 |
TXNRD2 | chr22 | 19880820 | 19880821 | rs34553125 | + | G | G/T | single | intron | 9 | 1000GENOMES,ABI,BCMHGSC_JDW,ENSEMBL,HUMANGENOME_JCVI,ILLUMINA,PJP,SSMP,TISHKOFF, | 2 | 0.928571 |
TXNRD2 | chr22 | 19880917 | 19880918 | rs115629693 | + | A | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.989111 |
TXNRD2 | chr22 | 19881026 | 19881027 | rs4819845 | + | C | C/T | single | intron | 22 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.123955 |
TXNRD2 | chr22 | 19881277 | 19881278 | rs112871419 | + | G | A/G | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.013761 |
TXNRD2 | chr22 | 19881320 | 19881321 | rs56312415 | + | G | A/G | single | intron | 6 | 1000GENOMES,GMI,HGSV,ILLUMINA,ILLUMINA-UK,SSMP, | 2 | 0.028899 |
TXNRD2 | chr22 | 19881555 | 19881556 | rs5992493 | + | A | A/G | single | intron | 18 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.728906 |
TXNRD2 | chr22 | 19881825 | 19881826 | rs5993854 | + | A | A/G | single | intron | 9 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,ILLUMINA,PJP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.804218 |
TXNRD2 | chr22 | 19881887 | 19881888 | rs117638280 | + | C | C/T | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.983029 |
TXNRD2 | chr22 | 19882114 | 19882115 | rs5993855 | + | A | A/G | single | intron | 12 | 1000GENOMES,BCMHGSC_JDW,BUSHMAN,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.780979 |
TXNRD2 | chr22 | 19882201 | 19882202 | rs79388039 | + | T | C/T | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.027982 |
TXNRD2 | chr22 | 19882629 | 19882630 | rs5993856 | + | G | A/G | single | intron | 16 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,NHLBI-ESP,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.225423 |
TXNRD2 | chr22 | 19882887 | 19882888 | rs5992494 | + | G | A/G | single | intron | 8 | 1000GENOMES,BUSHMAN,CLINSEQ_SNP,HGSV,ILLUMINA,NHLBI-ESP,SC_SNP,TISHKOFF, | 2 | 0.078548 |
TXNRD2 | chr22 | 19882983 | 19882984 | rs5992495 | + | T | G/T | single | missense | 20 | 1000GENOMES,ABI,AFFY,BUSHMAN,CLINSEQ_SNP,CORNELL,ENSEMBL,EXOME_CHIP,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,NHLBI-ESP,PJP,SC_SNP,SEATTLESEQ,SSMP,TISHKOFF, | 2 | 0.232925 |
TXNRD2 | chr22 | 19883188 | 19883189 | rs78239309 | + | A | A/G | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.942202 |
TXNRD2 | chr22 | 19883853 | 19883857 | rs113617906 | + | CAAC | -/CAAC | deletion | intron | 5 | 1000GENOMES,BILGI_BIOE,BUSHMAN,SSMP,TSC-CSHL, | 2 | 0.198624 |
TXNRD2 | chr22 | 19883856 | 19883857 | rs60113833 | + | C | A/C | single | intron | 11 | 1000GENOMES,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP,TISHKOFF, | 2 | 0.985845 |
TXNRD2 | chr22 | 19884038 | 19884039 | rs879033 | - | C | G/T | single | intron | 11 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,ENSEMBL,GMI,ILLUMINA-UK,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.776201 |
TXNRD2 | chr22 | 19884210 | 19884211 | rs879032 | - | C | A/G | single | intron | 5 | 1000GENOMES,ABI,ILLUMINA,TISHKOFF,TSC-CSHL, | 2 | 0.014337 |
TXNRD2 | chr22 | 19884382 | 19884383 | rs62222121 | + | G | A/G | single | intron | 7 | 1000GENOMES,BCMHGSC_JDW,ENSEMBL,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.096700 |
TXNRD2 | chr22 | 19884656 | 19884657 | rs732262 | - | C | A/G | single | intron | 11 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA,KRIBB_YJKIM,SSMP,TISHKOFF,TSC-CSHL,YUSUKE, | 4 | 0.129340 |
TXNRD2 | chr22 | 19884868 | 19884869 | rs34433782 | + | A | A/G | single | intron | 8 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.880843 |
TXNRD2 | chr22 | 19885027 | 19885028 | rs12168841 | + | G | A/G | single | intron | 12 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.225674 |
TXNRD2 | chr22 | 19885547 | 19885548 | rs12169091 | + | G | G/T | single | intron | 14 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,NHLBI-ESP,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.774828 |
TXNRD2 | chr22 | 19885975 | 19885976 | rs62222122 | + | C | C/T | single | intron | 10 | 1000GENOMES,BCMHGSC_JDW,BUSHMAN,ENSEMBL,GMI,ILLUMINA,ILLUMINA-UK,PJP,SSMP,TISHKOFF, | 2 | 0.808608 |
TXNRD2 | chr22 | 19886026 | 19886027 | rs150780171 | + | T | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.035813 |
TXNRD2 | chr22 | 19886442 | 19886443 | rs76692419 | + | G | A/G | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.041770 |
TXNRD2 | chr22 | 19886796 | 19886797 | rs8142006 | + | G | A/G | single | intron | 11 | 1000GENOMES,BCMHGSC_JDW,BUSHMAN,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.193504 |
TXNRD2 | chr22 | 19887349 | 19887350 | rs3788312 | + | A | A/T | single | intron | 8 | 1000GENOMES,AFFY,BUSHMAN,GMI,PERLEGEN,SSMP,TISHKOFF,YUSUKE, | 2 | 0.872308 |
TXNRD2 | chr22 | 19887375 | 19887376 | rs3788313 | + | A | A/G | single | intron | 6 | 1000GENOMES,ILLUMINA,KRIBB_YJKIM,SSMP,WI_SSAHASNP,YUSUKE, | 2 | 0.955471 |
TXNRD2 | chr22 | 19887768 | 19887769 | rs58882338 | + | C | A/C | single | intron | 4 | 1000GENOMES,HGSV,ILLUMINA-UK,SSMP, | 2 | 0.027982 |
TXNRD2 | chr22 | 19887781 | 19887782 | rs80354202 | + | C | A/C | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.044425 |
TXNRD2 | chr22 | 19887812 | 19887813 | rs56751524 | + | G | G/T | single | intron | 5 | 1000GENOMES,GMI,HGSV,ILLUMINA,SSMP, | 2 | 0.968454 |
TXNRD2 | chr22 | 19887843 | 19887844 | rs35646899 | + | G | A/G | single | intron | 5 | 1000GENOMES,ABI,BUSHMAN,ENSEMBL,TISHKOFF, | 2 | 0.162546 |
TXNRD2 | chr22 | 19887846 | 19887847 | rs35061565 | + | C | A/C | single | intron | 8 | 1000GENOMES,ABI,BUSHMAN,ENSEMBL,GMI,HGSV,SSMP,TISHKOFF, | 2 | 0.190018 |
TXNRD2 | chr22 | 19887899 | 19887900 | rs140902769 | + | G | C/G | single | intron | 1 | 1000GENOMES, | 2 | 0.015611 |
TXNRD2 | chr22 | 19888097 | 19888098 | rs58923483 | + | C | C/T | single | intron | 3 | 1000GENOMES,HGSV,SSMP, | 2 | 0.972452 |
TXNRD2 | chr22 | 19888100 | 19888101 | rs34270376 | + | A | A/G | single | intron | 9 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,ENSEMBL,HGSV,PJP,SSMP,TISHKOFF, | 2 | 0.799725 |
TXNRD2 | chr22 | 19888145 | 19888146 | rs34639306 | + | G | A/G | single | intron | 10 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,ENSEMBL,GMI,HGSV,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.190476 |
TXNRD2 | chr22 | 19888554 | 19888555 | rs56028119 | + | G | A/G | single | intron | 4 | 1000GENOMES,HGSV,ILLUMINA-UK,SSMP, | 2 | 0.023853 |
TXNRD2 | chr22 | 19888727 | 19888728 | rs112011114 | + | G | A/G | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.014227 |
TXNRD2 | chr22 | 19888859 | 19888860 | rs113083848 | + | C | A/C | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.018807 |
TXNRD2 | chr22 | 19889174 | 19889175 | rs7289412 | + | C | C/T | single | intron | 3 | 1000GENOMES,BCM_SSAHASNP,TISHKOFF, | 2 | 0.985691 |
TXNRD2 | chr22 | 19889366 | 19889367 | rs56892289 | + | G | C/G | single | intron | 5 | 1000GENOMES,GMI,HGSV,ILLUMINA-UK,SSMP, | 2 | 0.028899 |
TXNRD2 | chr22 | 19889422 | 19889423 | rs3788314 | + | G | A/G | single | intron | 18 | 1000GENOMES,ABI,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SC_SNP,SSMP,TISHKOFF,YUSUKE, | 3 | 0.560289 |
TXNRD2 | chr22 | 19889490 | 19889491 | rs3788315 | + | G | A/G | single | intron | 6 | 1000GENOMES,BCM-HGSC-SUB,GMI,SC_SNP,SSMP,YUSUKE, | 2 | 0.186120 |
TXNRD2 | chr22 | 19889634 | 19889635 | rs3788316 | + | A | A/G | single | intron | 9 | 1000GENOMES,BUSHMAN,GMI,HGSV,PJP,SC_SNP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.768103 |
TXNRD2 | chr22 | 19889824 | 19889825 | rs3788317 | + | G | G/T | single | intron | 17 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SC_SNP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.693182 |
TXNRD2 | chr22 | 19890405 | 19890406 | rs74953411 | + | T | G/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.034408 |
TXNRD2 | chr22 | 19890471 | 19890472 | rs115303693 | + | C | C/T | single | intron | 4 | 1000GENOMES,ILLUMINA,NHLBI-ESP,TISHKOFF, | 2 | 0.989111 |
TXNRD2 | chr22 | 19891394 | 19891395 | rs9605027 | + | C | C/T | single | intron | 10 | 1000GENOMES,BGI,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,PJP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.628440 |
TXNRD2 | chr22 | 19891457 | 19891458 | rs73877392 | + | A | A/G | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.966972 |
TXNRD2 | chr22 | 19891654 | 19891655 | rs115839620 | + | G | G/T | single | intron | 1 | 1000GENOMES, | 2 | 0.989111 |
TXNRD2 | chr22 | 19891697 | 19891698 | rs74478331 | + | C | C/T | single | intron | 7 | 1000GENOMES,BL,BUSHMAN,GMI,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.862907 |
TXNRD2 | chr22 | 19891716 | 19891717 | rs58952190 | + | T | C/T | single | intron | 5 | 1000GENOMES,GMI,HGSV,ILLUMINA-UK,SSMP, | 2 | 0.033028 |
TXNRD2 | chr22 | 19891755 | 19891756 | rs35681796 | + | T | -/T | deletion | intron | 6 | 1000GENOMES,ABI,GMI,HUMANGENOME_JCVI,LUNTER,TISHKOFF, | 2 | 0.044037 |
TXNRD2 | chr22 | 19891934 | 19891935 | rs10427571 | + | G | A/G | single | intron | 3 | 1000GENOMES,BCM_SSAHASNP,TISHKOFF, | 2 | 0.023955 |
TXNRD2 | chr22 | 19892049 | 19892050 | rs55655113 | + | T | C/T | single | intron | 5 | 1000GENOMES,GMI,HGSV,ILLUMINA-UK,SSMP, | 2 | 0.033028 |
TXNRD2 | chr22 | 19892106 | 19892107 | rs4819846 | + | T | G/T | single | intron | 10 | 1000GENOMES,BGI,COMPLETE_GENOMICS,GMI,HGSV,PJP,SC_SNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.373511 |
TXNRD2 | chr22 | 19892131 | 19892132 | rs58170165 | + | A | A/G | single | intron | 4 | 1000GENOMES,HGSV,ILLUMINA-UK,SSMP, | 2 | 0.965596 |
TXNRD2 | chr22 | 19892233 | 19892234 | rs73877395 | + | G | A/G | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.027982 |
TXNRD2 | chr22 | 19892321 | 19892322 | rs737863 | - | G | C/G | single | intron | 11 | 1000GENOMES,ABI,BCM_SSAHASNP,BL,GMI,ILLUMINA,ILLUMINA-UK,SC_SNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.738532 |
TXNRD2 | chr22 | 19892330 | 19892331 | rs737862 | - | G | C/G | single | intron | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,KRIBB_YJKIM,PJP,SC_SNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.330283 |
TXNRD2 | chr22 | 19892769 | 19892770 | rs78431207 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.037892 |
TXNRD2 | chr22 | 19892916 | 19892917 | rs7290255 | + | G | A/G | single | intron | 9 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,ENSEMBL,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.078297 |
TXNRD2 | chr22 | 19893035 | 19893036 | rs116182994 | + | C | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.968641 |
TXNRD2 | chr22 | 19893079 | 19893080 | rs9606174 | + | A | A/G | single | intron | 7 | 1000GENOMES,BL,BUSHMAN,ILLUMINA-UK,SC_SNP,SSMP,TISHKOFF, | 2 | 0.763158 |
TXNRD2 | chr22 | 19893259 | 19893260 | rs57323478 | + | C | C/T | single | intron | 2 | 1000GENOMES,HGSV, | 2 | 0.986498 |
TXNRD2 | chr22 | 19893413 | 19893414 | rs34140079 | + | G | A/G | single | intron | 4 | 1000GENOMES,ABI,HUMANGENOME_JCVI,ILLUMINA, | 2 | 0.010082 |
TXNRD2 | chr22 | 19893492 | 19893493 | rs73877396 | + | A | A/C | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.966972 |
TXNRD2 | chr22 | 19893723 | 19893724 | rs73877397 | + | T | C/T | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.033028 |
TXNRD2 | chr22 | 19893754 | 19893755 | rs73877398 | + | T | C/T | single | intron | 5 | 1000GENOMES,GMI,ILLUMINA,ILLUMINA-UK,SSMP, | 2 | 0.033028 |
TXNRD2 | chr22 | 19893779 | 19893780 | rs1858772 | + | G | C/G/T | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PERLEGEN,PJP,SC_SNP,TISHKOFF,TSC-CSHL, | 2 | 0.742182 |
TXNRD2 | chr22 | 19894017 | 19894018 | rs76320614 | + | G | A/G | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.032599 |
TXNRD2 | chr22 | 19894022 | 19894023 | rs1858773 | + | T | G/T | single | intron | 10 | 1000GENOMES,ABI,BL,BUSHMAN,GMI,KRIBB_YJKIM,SC_SNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.143888 |
TXNRD2 | chr22 | 19894083 | 19894084 | rs115585146 | + | G | G/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.955575 |
TXNRD2 | chr22 | 19894130 | 19894131 | rs79956748 | + | C | A/C | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.032110 |
TXNRD2 | chr22 | 19894150 | 19894150 | rs144233043 | + | - | -/AAA | insertion | cds-indel | 4 | 1000GENOMES,GMI,LUNTER,SSMP, | 2 | 0.967401 |
TXNRD2 | chr22 | 19894312 | 19894313 | rs73877400 | + | A | A/G | single | intron | 5 | 1000GENOMES,GMI,ILLUMINA,ILLUMINA-UK,SSMP, | 2 | 0.966972 |
TXNRD2 | chr22 | 19894347 | 19894348 | rs78301360 | + | C | C/T | single | intron | 2 | 1000GENOMES,GMI, | 2 | 0.979094 |
TXNRD2 | chr22 | 19894383 | 19894384 | rs5993858 | + | C | C/T | single | intron | 3 | 1000GENOMES,BCM_SSAHASNP,SC_SNP, | 2 | 0.971534 |
TXNRD2 | chr22 | 19894422 | 19894423 | rs79995555 | + | C | C/T | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.962810 |
TXNRD2 | chr22 | 19894448 | 19894449 | rs150337947 | + | A | A/C | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.973370 |
TXNRD2 | chr22 | 19894581 | 19894582 | rs149586631 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.032140 |
TXNRD2 | chr22 | 19894975 | 19894976 | rs62222126 | + | G | A/G | single | intron | 4 | 1000GENOMES,BCMHGSC_JDW,GMI,SSMP, | 2 | 0.031680 |
TXNRD2 | chr22 | 19894981 | 19894982 | rs62222128 | + | A | A/G/T | single | intron | 6 | 1000GENOMES,BCMHGSC_JDW,COMPLETE_GENOMICS,ENSEMBL,GMI,SSMP, | 2 | 0.821723 |
TXNRD2 | chr22 | 19895130 | 19895131 | rs73148970 | + | C | C/T | single | intron | 6 | 1000GENOMES,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI, | 2 | 0.519011 |
TXNRD2 | chr22 | 19895330 | 19895331 | rs10222209 | + | A | A/G | single | intron | 6 | 1000GENOMES,BCMHGSC_JDW,ENSEMBL,HUMANGENOME_JCVI,PJP,WUGSC_SSAHASNP, | 2 | 0.672319 |
TXNRD2 | chr22 | 19895356 | 19895357 | rs112206580 | + | G | A/G | single | intron | 3 | 1000GENOMES,BUSHMAN,SSMP, | 2 | 0.146789 |
TXNRD2 | chr22 | 19895372 | 19895373 | rs112587800 | + | A | A/G | single | intron | 2 | 1000GENOMES,COMPLETE_GENOMICS, | 2 | 0.885780 |
TXNRD2 | chr22 | 19895447 | 19895448 | rs10222210 | + | A | A/G | single | intron | 9 | 1000GENOMES,ABI,BGI,BL,ENSEMBL,GMI,HUMANGENOME_JCVI,SSMP,WUGSC_SSAHASNP, | 2 | 0.306141 |
TXNRD2 | chr22 | 19895574 | 19895575 | rs9606175 | + | T | G/T | single | intron | 3 | 1000GENOMES,SC_SNP,SSMP, | 2 | 0.149219 |
TXNRD2 | chr22 | 19895727 | 19895728 | rs35221258 | + | A | A/C | single | intron | 8 | 1000GENOMES,ABI,BCMHGSC_JDW,COMPLETE_GENOMICS,ENSEMBL,HUMANGENOME_JCVI,PJP,SSMP, | 2 | 0.909341 |
TXNRD2 | chr22 | 19895883 | 19895884 | rs60860719 | + | G | G/T | single | intron | 5 | 1000GENOMES,GMI,HGSV,ILLUMINA-UK,SSMP, | 2 | 0.972936 |
TXNRD2 | chr22 | 19896128 | 19896129 | rs61358034 | + | A | A/T | single | intron | 5 | 1000GENOMES,GMI,HGSV,ILLUMINA-UK,SSMP, | 2 | 0.971101 |
TXNRD2 | chr22 | 19896134 | 19896135 | rs9618714 | + | A | A/C | single | intron | 5 | 1000GENOMES,HGSV,PJP,SC_SNP,TISHKOFF, | 2 | 0.958716 |
TXNRD2 | chr22 | 19896448 | 19896449 | rs60421292 | + | T | C/T | single | intron | 5 | 1000GENOMES,GMI,HGSV,ILLUMINA-UK,SSMP, | 2 | 0.033028 |
TXNRD2 | chr22 | 19896508 | 19896509 | rs5993863 | + | C | A/C | single | intron | 5 | 1000GENOMES,GMI,SC_SNP,SSMP,TISHKOFF, | 2 | 0.163912 |
TXNRD2 | chr22 | 19896528 | 19896529 | rs60394271 | + | A | A/G | single | intron | 3 | 1000GENOMES,HGSV,SSMP, | 2 | 0.968779 |
TXNRD2 | chr22 | 19896556 | 19896557 | rs58879524 | + | A | A/G | single | intron | 3 | 1000GENOMES,HGSV,SSMP, | 2 | 0.966483 |
TXNRD2 | chr22 | 19896570 | 19896571 | rs5993864 | + | C | C/T | single | intron | 16 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.255825 |
TXNRD2 | chr22 | 19896613 | 19896614 | rs9617848 | + | G | A/G | single | intron | 3 | 1000GENOMES,SC_SNP,TISHKOFF, | 2 | 0.040826 |
TXNRD2 | chr22 | 19896614 | 19896615 | rs5748465 | + | G | A/G | single | intron | 9 | 1000GENOMES,ABI,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,PJP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.365138 |
TXNRD2 | chr22 | 19896652 | 19896653 | rs185377077 | + | C | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.988062 |
TXNRD2 | chr22 | 19896653 | 19896654 | rs189774969 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.010101 |
TXNRD2 | chr22 | 19896660 | 19896661 | rs58299207 | + | A | A/G | single | intron | 3 | 1000GENOMES,HGSV,SSMP, | 2 | 0.969238 |
TXNRD2 | chr22 | 19896732 | 19896733 | rs141503692 | + | A | A/C | single | intron | 1 | 1000GENOMES, | 2 | 0.970615 |
TXNRD2 | chr22 | 19896771 | 19896772 | rs73877401 | + | T | C/T | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.033028 |
TXNRD2 | chr22 | 19896967 | 19896969 | rs139624194 | + | AA | -/AA | deletion | intron | 4 | 1000GENOMES,GMI,LUNTER,SSMP, | 2 | 0.021579 |
TXNRD2 | chr22 | 19897442 | 19897444 | rs140145073 | + | CA | -/CA | deletion | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.357208 |
TXNRD2 | chr22 | 19897565 | 19897566 | rs73877402 | + | A | A/G | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.966972 |
TXNRD2 | chr22 | 19897607 | 19897608 | rs73880003 | + | C | A/C | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.033028 |
TXNRD2 | chr22 | 19897656 | 19897657 | rs12170324 | + | T | C/T | single | intron | 4 | 1000GENOMES,HGSV,SC_SNP,TISHKOFF, | 2 | 0.032110 |
TXNRD2 | chr22 | 19897895 | 19897896 | rs16982751 | + | A | A/C | single | intron | 6 | 1000GENOMES,GMI,HGSV,ILLUMINA-UK,PERLEGEN,SSMP, | 2 | 0.966810 |
TXNRD2 | chr22 | 19897967 | 19897968 | rs55793425 | + | G | G/T | single | intron | 6 | 1000GENOMES,GMI,HGSV,ILLUMINA,ILLUMINA-UK,SSMP, | 2 | 0.972936 |
TXNRD2 | chr22 | 19898184 | 19898185 | rs56154039 | + | A | A/G | single | intron | 5 | 1000GENOMES,GMI,HGSV,ILLUMINA-UK,SSMP, | 2 | 0.966972 |
TXNRD2 | chr22 | 19898214 | 19898215 | rs12167533 | + | A | A/G | single | intron | 3 | 1000GENOMES,SC_SNP,TISHKOFF, | 2 | 0.967860 |
TXNRD2 | chr22 | 19898372 | 19898373 | rs9617849 | + | G | A/G | single | intron | 3 | 1000GENOMES,SC_SNP,TISHKOFF, | 2 | 0.032110 |
TXNRD2 | chr22 | 19898456 | 19898457 | rs55887811 | + | A | A/G | single | intron | 4 | 1000GENOMES,GMI,HGSV,SSMP, | 2 | 0.967401 |
TXNRD2 | chr22 | 19898565 | 19898566 | rs55920879 | + | T | C/T | single | intron | 6 | 1000GENOMES,BL,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI, | 2 | 0.983501 |
TXNRD2 | chr22 | 19898570 | 19898571 | rs71313930 | + | T | C/T | single | intron | 6 | 1000GENOMES,BL,COMPLETE_GENOMICS,ENSEMBL,HUMANGENOME_JCVI,TISHKOFF, | 2 | 0.984918 |
TXNRD2 | chr22 | 19898575 | 19898576 | rs4819848 | + | G | C/G | single | intron | 10 | 1000GENOMES,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,SC_SNP,TISHKOFF,WI_SSAHASNP, | 2 | 0.969406 |
TXNRD2 | chr22 | 19898588 | 19898589 | rs2871044 | + | A | A/C | single | intron | 13 | 1000GENOMES,BGI,BL,BUSHMAN,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,SC_SNP,SSAHASNP,SSMP,TSC-CSHL,WI_SSAHASNP, | 2 | 0.013730 |
TXNRD2 | chr22 | 19898590 | 19898591 | rs2871045 | + | T | C/T | single | intron | 14 | 1000GENOMES,BGI,BL,BUSHMAN,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,KRIBB_YJKIM,SC_SNP,SSAHASNP,SSMP,TSC-CSHL,WI_SSAHASNP, | 2 | 0.978858 |
TXNRD2 | chr22 | 19898659 | 19898660 | rs149796774 | + | C | -/C | deletion | intron | 6 | 1000GENOMES,BILGI_BIOE,LUNTER,SSMP,TISHKOFF,WARNICH_LAB, | 2 | 0.089073 |
TXNRD2 | chr22 | 19898817 | 19898818 | rs55715863 | + | C | A/C | single | intron | 6 | 1000GENOMES,CLINSEQ_SNP,GMI,HGSV,ILLUMINA-UK,SSMP, | 2 | 0.033978 |
TXNRD2 | chr22 | 19898836 | 19898837 | rs885987 | + | A | A/G | single | intron | 22 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,NHLBI-ESP,PJP,SC_JCM,SC_SNP,SI_EXO,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.308985 |
TXNRD2 | chr22 | 19898885 | 19898886 | rs9606176 | + | C | C/T | single | intron | 12 | 1000GENOMES,BUSHMAN,CLINSEQ_SNP,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,SC_SNP,SSMP,TISHKOFF, | 2 | 0.852651 |
TXNRD2 | chr22 | 19898886 | 19898887 | rs45550336 | + | G | A/G | single | intron | 7 | 1000GENOMES,CLINSEQ_SNP,GMI,ILLUMINA-UK,NHLBI-ESP,SI_EXO,SSMP, | 2 | 0.031318 |
TXNRD2 | chr22 | 19898996 | 19898997 | rs77585626 | + | A | A/G | single | intron | 3 | 1000GENOMES,NHLBI-ESP,TISHKOFF, | 2 | 0.982143 |
TXNRD2 | chr22 | 19899060 | 19899061 | rs16982754 | + | G | C/G | single | intron | 6 | 1000GENOMES,GMI,HGSV,ILLUMINA-UK,PERLEGEN,SSMP, | 2 | 0.034022 |
TXNRD2 | chr22 | 19899215 | 19899216 | rs79099740 | + | C | C/G | single | intron | 1 | 1000GENOMES, | 2 | 0.985192 |
TXNRD2 | chr22 | 19899470 | 19899471 | rs116287859 | + | C | C/T | single | intron | 3 | 1000GENOMES,SSMP,TISHKOFF, | 2 | 0.956010 |
TXNRD2 | chr22 | 19899765 | 19899766 | rs73880004 | + | C | C/T | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.966972 |
TXNRD2 | chr22 | 19899783 | 19899784 | rs114318103 | + | G | C/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.019164 |
TXNRD2 | chr22 | 19899817 | 19899818 | rs1878 | + | G | A/G | single | intron | 11 | 1000GENOMES,BCM-HGSC-SUB,BGI,COMPLETE_GENOMICS,GMI,HGSV,PERLEGEN,SC_SNP,SSMP,TISHKOFF,WIAF, | 2 | 0.376987 |
TXNRD2 | chr22 | 19899838 | 19899839 | rs7410379 | + | G | A/G | single | intron | 15 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BGI,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.366992 |
TXNRD2 | chr22 | 19899885 | 19899886 | rs2904563 | + | A | A/G | single | intron | 9 | 1000GENOMES,BCM_SSAHASNP,BL,BUSHMAN,GMI,PJP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.736939 |
TXNRD2 | chr22 | 19899890 | 19899891 | rs75784186 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.033537 |
TXNRD2 | chr22 | 19899895 | 19899896 | rs115340055 | + | A | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.965157 |
TXNRD2 | chr22 | 19899933 | 19899934 | rs34350581 | + | C | C/T | single | intron | 8 | 1000GENOMES,ABI,BCMHGSC_JDW,ENSEMBL,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.922090 |
TXNRD2 | chr22 | 19899976 | 19899977 | rs35155059 | + | G | G/T | single | intron | 4 | 1000GENOMES,ABI,BCMHGSC_JDW,ENSEMBL, | 2 | 0.922477 |
TXNRD2 | chr22 | 19899979 | 19899980 | rs34713791 | + | C | C/T | single | intron | 5 | 1000GENOMES,ABI,BCMHGSC_JDW,ENSEMBL,TISHKOFF, | 2 | 0.916055 |
TXNRD2 | chr22 | 19900074 | 19900075 | rs1005873 | + | A | A/G | single | intron | 16 | 1000GENOMES,ABI,BCM_SSAHASNP,BL,BUSHMAN,GMI,HGBASE,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SC_SNP,SSMP,TISHKOFF,TSC-CSHL,YUSUKE, | 2 | 0.722322 |
TXNRD2 | chr22 | 19900654 | 19900655 | rs61675186 | + | G | A/G | single | intron | 4 | 1000GENOMES,HGSV,ILLUMINA-UK,SSMP, | 2 | 0.029358 |
TXNRD2 | chr22 | 19900730 | 19900731 | rs34403630 | + | C | C/T | single | intron | 5 | 1000GENOMES,ABI,HUMANGENOME_JCVI,ILLUMINA,PJP, | 2 | 0.980275 |
TXNRD2 | chr22 | 19900731 | 19900732 | rs77542965 | + | G | A/G | single | intron | 3 | 1000GENOMES,SSMP,TISHKOFF, | 2 | 0.019164 |
TXNRD2 | chr22 | 19900766 | 19900767 | rs60787976 | + | T | C/T | single | intron | 5 | 1000GENOMES,GMI,HGSV,ILLUMINA-UK,SSMP, | 2 | 0.033028 |
TXNRD2 | chr22 | 19900949 | 19900950 | rs200524386 | + | C | -/C | deletion | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.032140 |
TXNRD2 | chr22 | 19900956 | 19900957 | rs201166272 | + | A | -/A | deletion | intron | 1 | 1000GENOMES, | 2 | 0.031680 |
TXNRD2 | chr22 | 19900981 | 19900982 | rs73880005 | + | T | C/T | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.033028 |
TXNRD2 | chr22 | 19901008 | 19901009 | rs73880006 | + | C | C/T | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.966972 |
TXNRD2 | chr22 | 19901097 | 19901098 | rs73880007 | + | A | A/G | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.966972 |
TXNRD2 | chr22 | 19901205 | 19901206 | rs73880008 | + | G | A/G | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.033028 |
TXNRD2 | chr22 | 19901208 | 19901209 | rs73880009 | + | T | C/T | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.034862 |
TXNRD2 | chr22 | 19901422 | 19901423 | rs35515070 | + | C | C/T | single | intron | 8 | 1000GENOMES,ABI,BCMHGSC_JDW,ENSEMBL,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.921245 |
TXNRD2 | chr22 | 19901467 | 19901468 | rs73880010 | + | T | A/T | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.033028 |
TXNRD2 | chr22 | 19902165 | 19902166 | rs12167777 | + | G | A/G | single | intron | 3 | 1000GENOMES,SC_SNP,TISHKOFF, | 2 | 0.038328 |
TXNRD2 | chr22 | 19902172 | 19902173 | rs10427792 | + | C | C/T | single | intron | 3 | 1000GENOMES,BCM_SSAHASNP,TISHKOFF, | 2 | 0.975610 |
TXNRD2 | chr22 | 19902323 | 19902324 | rs73880011 | + | G | A/G | single | intron | 5 | 1000GENOMES,GMI,ILLUMINA,ILLUMINA-UK,SSMP, | 2 | 0.036239 |
TXNRD2 | chr22 | 19902525 | 19902526 | rs4597638 | + | T | C/T | single | intron | 10 | 1000GENOMES,ABI,BL,BUSHMAN,DEVINE_LAB,ILLUMINA,PERLEGEN,SC_JCM,SSMP,TISHKOFF, | 2 | 0.155957 |
TXNRD2 | chr22 | 19902670 | 19902671 | rs16982755 | + | C | C/T | single | intron | 8 | 1000GENOMES,GMI,ILLUMINA,ILLUMINA-UK,NHLBI-ESP,PERLEGEN,SI_EXO,SSMP, | 2 | 0.951790 |
TXNRD2 | chr22 | 19902895 | 19902896 | rs2073771 | - | C | A/G | single | intron | 16 | 1000GENOMES,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGBASE,ILLUMINA,KRIBB_YJKIM,PJP,SC_SNP,SI_EXO,SSMP,YUSUKE, | 2 | 0.540220 |
TXNRD2 | chr22 | 19902896 | 19902897 | rs116165976 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.017857 |
TXNRD2 | chr22 | 19902916 | 19902917 | rs114905700 | + | G | C/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.021777 |
TXNRD2 | chr22 | 19903289 | 19903290 | rs61736929 | + | C | C/G | single | missense | 9 | 1000GENOMES,CLINSEQ_SNP,CORNELL,EXOME_CHIP,GOLDSTEINLAB,ILLUMINA,NHLBI-ESP,SEATTLESEQ,TISHKOFF, | 2 | 0.963597 |
TXNRD2 | chr22 | 19903440 | 19903441 | rs79661740 | + | C | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.988676 |
TXNRD2 | chr22 | 19903657 | 19903658 | rs115268335 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.029181 |
TXNRD2 | chr22 | 19903706 | 19903707 | rs35792038 | + | T | C/T | single | intron | 9 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,ILLUMINA,PJP,SSMP,TISHKOFF, | 2 | 0.108417 |
TXNRD2 | chr22 | 19903732 | 19903733 | rs4819850 | + | A | A/G | single | intron | 18 | 1000GENOMES,ABI,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SC_SNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.267198 |
TXNRD2 | chr22 | 19903840 | 19903841 | rs78090538 | + | C | C/T | single | intron | 3 | 1000GENOMES,ILLUMINA,TISHKOFF, | 2 | 0.959930 |
TXNRD2 | chr22 | 19904316 | 19904317 | rs7289375 | + | T | G/T | single | intron | 3 | 1000GENOMES,BCM_SSAHASNP,TISHKOFF, | 2 | 0.024730 |
TXNRD2 | chr22 | 19904897 | 19904898 | rs117014524 | + | G | A/G | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.012620 |
TXNRD2 | chr22 | 19905116 | 19905117 | rs145701783 | + | C | C/T | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.987144 |
TXNRD2 | chr22 | 19905554 | 19905555 | rs77573782 | + | C | C/T | single | intron | 3 | 1000GENOMES,BL,SSMP, | 2 | 0.976501 |
TXNRD2 | chr22 | 19905801 | 19905802 | rs756661 | - | G | C/T | single | intron | 26 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,PJP,SC_SNP,SI_EXO,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.254886 |
TXNRD2 | chr22 | 19905867 | 19905868 | rs34776119 | + | G | G/T | single | intron | 10 | 1000GENOMES,ABI,BCM-HGSC-SUB,COMPLETE_GENOMICS,GMI,HUMANGENOME_JCVI,ILLUMINA,PJP,SI_EXO,TISHKOFF, | 2 | 0.956462 |
TXNRD2 | chr22 | 19905943 | 19905944 | rs10427871 | + | A | A/G | single | intron | 6 | 1000GENOMES,AFFY,BCM_SSAHASNP,ILLUMINA,KRIBB_YJKIM,TISHKOFF, | 2 | 0.970807 |
TXNRD2 | chr22 | 19906051 | 19906052 | rs9618715 | + | G | A/G | single | intron | 3 | 1000GENOMES,SC_SNP,TISHKOFF, | 2 | 0.040070 |
TXNRD2 | chr22 | 19906095 | 19906096 | rs5993865 | + | C | C/T | single | intron | 17 | 1000GENOMES,ABI,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,ILLUMINA,PJP,SC_SNP,SI_EXO,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.489469 |
TXNRD2 | chr22 | 19906255 | 19906256 | rs34751052 | + | G | A/G | single | intron | 12 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,HGSV,HUMANGENOME_JCVI,PJP,SI_EXO,SSMP,TISHKOFF, | 2 | 0.105672 |
TXNRD2 | chr22 | 19906304 | 19906305 | rs182088477 | + | T | A/T | single | intron | 1 | 1000GENOMES, | 2 | 0.031221 |
TXNRD2 | chr22 | 19906305 | 19906306 | rs3747067 | + | C | C/G | single | intron | 24 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PJP,SC_SNP,SI_EXO,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,YUSUKE, | 2 | 0.328930 |
TXNRD2 | chr22 | 19906369 | 19906370 | rs9606178 | + | G | A/G | single | intron | 6 | 1000GENOMES,CLINSEQ_SNP,ILLUMINA,NHLBI-ESP,SC_SNP,SSMP, | 2 | 0.020808 |
TXNRD2 | chr22 | 19906510 | 19906511 | rs11541479 | - | G | C/T | single | coding-synon | 17 | 1000GENOMES,ABI,BCMHGSC_JDW,CGAP-GAI,CLINSEQ_SNP,CORNELL,ENSEMBL,EXOME_CHIP,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PJP,SC_SNP,SEATTLESEQ,SSMP, | 2 | 0.828670 |
TXNRD2 | chr22 | 19906693 | 19906695 | rs146802029 | + | AC | -/AC | deletion | intron | 4 | 1000GENOMES,LUNTER,SSMP,WARNICH_LAB, | 2 | 0.171717 |
TXNRD2 | chr22 | 19906795 | 19906796 | rs13057265 | + | A | A/G | single | intron | 6 | 1000GENOMES,BCMHGSC_JDW,BUSHMAN,ENSEMBL,SSAHASNP,SSMP, | 2 | 0.884051 |
TXNRD2 | chr22 | 19907098 | 19907099 | rs5748469 | + | C | A/C | single | missense | 20 | 1000GENOMES,BCM-HGSC-SUB,BGI,BL,BUSHMAN,CGAP-GAI,CLINSEQ_SNP,COMPLETE_GENOMICS,CORNELL,EXOME_CHIP,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,SC_SNP,SEATTLESEQ,SSMP,TISHKOFF, | 2 | 0.463202 |
TXNRD2 | chr22 | 19907117 | 19907118 | rs5748470 | + | G | A/G | single | coding-synon | 21 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CORNELL,ENSEMBL,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,PJP,SC_SNP,SEATTLESEQ,SSMP,TISHKOFF, | 2 | 0.581461 |
TXNRD2 | chr22 | 19907191 | 19907192 | rs5748471 | + | A | A/G | single | intron | 18 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,NHLBI-ESP,PERLEGEN,PJP,SC_SNP,SSMP,TISHKOFF, | 3 | 0.260707 |
TXNRD2 | chr22 | 19907302 | 19907303 | rs7286612 | + | T | C/T | single | intron | 6 | BCM_SSAHASNP,COMPLETE_GENOMICS,ENSEMBL,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.108247 |
TXNRD2 | chr22 | 19907345 | 19907346 | rs17745433 | + | T | C/T | single | intron | 8 | 1000GENOMES,BCMHGSC_JDW,COMPLETE_GENOMICS,ENSEMBL,HUMANGENOME_JCVI,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.112200 |
TXNRD2 | chr22 | 19907471 | 19907472 | rs71312725 | + | T | C/T | single | intron | 6 | 1000GENOMES,COMPLETE_GENOMICS,ENSEMBL,HUMANGENOME_JCVI,SSMP,TISHKOFF, | 2 | 0.102106 |
TXNRD2 | chr22 | 19907482 | 19907483 | rs62222136 | + | A | A/G | single | intron | 7 | 1000GENOMES,BCMHGSC_JDW,BUSHMAN,ENSEMBL,HUMANGENOME_JCVI,SSMP,TISHKOFF, | 2 | 0.893364 |
TXNRD2 | chr22 | 19907523 | 19907524 | rs114526033 | + | C | A/C | single | intron | 1 | 1000GENOMES, | 2 | 0.010453 |
TXNRD2 | chr22 | 19907545 | 19907546 | rs115193076 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.014808 |
TXNRD2 | chr22 | 19907670 | 19907671 | rs145329713 | + | C | A/C | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.014692 |
TXNRD2 | chr22 | 19907692 | 19907693 | rs35723448 | + | A | A/G | single | intron | 10 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,HUMANGENOME_JCVI,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.893822 |
TXNRD2 | chr22 | 19907756 | 19907757 | rs115659066 | + | A | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.986498 |
TXNRD2 | chr22 | 19907793 | 19907794 | rs17745445 | + | G | A/G | single | intron | 8 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,HUMANGENOME_JCVI,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.099089 |
TXNRD2 | chr22 | 19907827 | 19907828 | rs35393877 | + | T | C/T | single | intron | 5 | 1000GENOMES,ABI,HUMANGENOME_JCVI,SSMP,TISHKOFF, | 2 | 0.082110 |
TXNRD2 | chr22 | 19907919 | 19907920 | rs11089318 | + | G | G/T | single | intron | 5 | 1000GENOMES,COMPLETE_GENOMICS,GMI,SC_SNP,SSMP, | 2 | 0.883486 |
TXNRD2 | chr22 | 19907926 | 19907927 | rs11089319 | + | G | A/G | single | intron | 13 | 1000GENOMES,ABI,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.119854 |
TXNRD2 | chr22 | 19907976 | 19907977 | rs76011333 | + | A | A/G | single | intron | 4 | 1000GENOMES,BL,GMI,SSMP, | 2 | 0.883375 |
TXNRD2 | chr22 | 19907998 | 19907999 | rs118052695 | + | G | A/G | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.040905 |
TXNRD2 | chr22 | 19908022 | 19908023 | rs1978055 | + | T | C/T | single | intron | 17 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TSC-CSHL, | 2 | 0.347925 |
TXNRD2 | chr22 | 19908063 | 19908064 | rs13056751 | + | C | C/T | single | intron | 7 | 1000GENOMES,ABI,BCMHGSC_JDW,ENSEMBL,HUMANGENOME_JCVI,SSAHASNP,SSMP, | 2 | 0.928964 |
TXNRD2 | chr22 | 19908142 | 19908143 | rs1978057 | + | T | C/T | single | intron | 17 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,SSAHASNP,TISHKOFF,TSC-CSHL, | 2 | 0.346119 |
TXNRD2 | chr22 | 19908218 | 19908219 | rs1978058 | + | C | C/T | single | intron | 21 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.728226 |
TXNRD2 | chr22 | 19908353 | 19908354 | rs112258831 | + | A | A/G | single | intron | 5 | 1000GENOMES,BUSHMAN,GMI,ILLUMINA,SSMP, | 2 | 0.890367 |
TXNRD2 | chr22 | 19908355 | 19908356 | rs11089320 | + | C | C/T | single | intron | 6 | 1000GENOMES,BUSHMAN,GMI,SC_SNP,SSMP,TISHKOFF, | 2 | 0.825229 |
TXNRD2 | chr22 | 19908362 | 19908363 | rs149066518 | + | T | C/T | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.013774 |
TXNRD2 | chr22 | 19908425 | 19908426 | rs138564052 | + | A | A/C | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.970156 |
TXNRD2 | chr22 | 19908455 | 19908456 | rs145240933 | + | T | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.013774 |
TXNRD2 | chr22 | 19908461 | 19908462 | rs200118529 | + | A | -/A | deletion | intron | 3 | 1000GENOMES,LUNTER,SSMP, | 2 | 0.019743 |
TXNRD2 | chr22 | 19908542 | 19908543 | rs12484807 | + | C | C/T | single | intron | 9 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,CSHL-HAPMAP,ENSEMBL,PJP,SSMP,TISHKOFF, | 2 | 0.808257 |
TXNRD2 | chr22 | 19908578 | 19908579 | rs12484727 | + | G | A/G | single | intron | 6 | 1000GENOMES,ABI,BL,CSHL-HAPMAP,GMI,SSMP, | 2 | 0.108815 |
TXNRD2 | chr22 | 19908843 | 19908844 | rs111857251 | + | G | G/T | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.986239 |
TXNRD2 | chr22 | 19908864 | 19908865 | rs114985812 | + | C | C/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.974303 |
TXNRD2 | chr22 | 19908874 | 19908875 | rs5746844 | + | A | A/T | single | intron | 17 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.183934 |
TXNRD2 | chr22 | 19908888 | 19908889 | rs149289292 | + | G | C/G | single | intron | 1 | 1000GENOMES, | 2 | 0.016988 |
TXNRD2 | chr22 | 19909256 | 19909257 | rs74965969 | + | G | C/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.027003 |
TXNRD2 | chr22 | 19909279 | 19909280 | rs75996974 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.027003 |
TXNRD2 | chr22 | 19909284 | 19909285 | rs8141516 | + | G | C/G | single | intron | 14 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PERLEGEN,PJP,SC_SNP,SSAHASNP,SSMP,WI_SSAHASNP, | 2 | 0.354167 |
TXNRD2 | chr22 | 19909383 | 19909384 | rs74956910 | + | T | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.027003 |
TXNRD2 | chr22 | 19909425 | 19909426 | rs8141691 | + | G | A/G | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.389476 |
TXNRD2 | chr22 | 19909511 | 19909512 | rs75840266 | + | C | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.972125 |
TXNRD2 | chr22 | 19909682 | 19909683 | rs73383885 | + | A | A/C | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.984321 |
TXNRD2 | chr22 | 19909976 | 19909977 | rs1012157 | - | A | C/T | single | intron | 23 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SC_JCM,SC_SNP,SNP500CANCER,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.804955 |
TXNRD2 | chr22 | 19910071 | 19910072 | rs73383887 | + | C | C/T | single | intron | 4 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.987626 |
TXNRD2 | chr22 | 19910160 | 19910161 | rs111394916 | + | T | C/T | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.017431 |
TXNRD2 | chr22 | 19910176 | 19910177 | rs16982759 | + | T | C/T | single | intron | 5 | 1000GENOMES,AFFY,KRIBB_YJKIM,PERLEGEN,TISHKOFF, | 2 | 0.037118 |
TXNRD2 | chr22 | 19910715 | 19910716 | rs7289747 | + | A | A/C | single | intron | 8 | 1000GENOMES,AFFY,BCM_SSAHASNP,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP, | 2 | 0.970444 |
TXNRD2 | chr22 | 19910761 | 19910762 | rs34004093 | + | A | A/G | single | intron | 6 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,SSMP,TISHKOFF, | 2 | 0.859762 |
TXNRD2 | chr22 | 19910762 | 19910762 | rs147306338 | + | - | -/T | insertion | intron | 3 | 1000GENOMES,LUNTER,TISHKOFF, | 2 | 0.987603 |
TXNRD2 | chr22 | 19911154 | 19911155 | rs112506735 | + | G | A/G | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.044037 |
TXNRD2 | chr22 | 19911585 | 19911586 | rs10212039 | + | C | C/T | single | intron | 19 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.245446 |
TXNRD2 | chr22 | 19911618 | 19911619 | rs10212033 | + | G | A/G | single | intron | 17 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.753531 |
TXNRD2 | chr22 | 19911830 | 19911831 | rs12484658 | + | A | A/G | single | intron | 7 | 1000GENOMES,BL,BUSHMAN,CSHL-HAPMAP,GMI,ILLUMINA,SSMP, | 2 | 0.882515 |
TXNRD2 | chr22 | 19912014 | 19912015 | rs9306229 | + | T | C/T | single | intron | 20 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.816233 |
TXNRD2 | chr22 | 19912357 | 19912358 | rs73880015 | + | G | A/G | single | intron | 4 | 1000GENOMES,ILLUMINA,ILLUMINA-UK,SSMP, | 2 | 0.033028 |
TXNRD2 | chr22 | 19912533 | 19912534 | rs185370338 | + | A | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.984389 |
TXNRD2 | chr22 | 19912534 | 19912535 | rs9606180 | + | T | C/T | single | intron | 5 | 1000GENOMES,HGSV,SC_SNP,SSMP,TISHKOFF, | 2 | 0.073462 |
TXNRD2 | chr22 | 19912573 | 19912574 | rs13055728 | + | A | A/G | single | intron | 2 | 1000GENOMES,SSAHASNP, | 2 | 0.989440 |
TXNRD2 | chr22 | 19912582 | 19912583 | rs12484923 | + | G | A/G | single | intron | 3 | 1000GENOMES,CSHL-HAPMAP,SSMP, | 2 | 0.069330 |
TXNRD2 | chr22 | 19912623 | 19912624 | rs5748474 | + | G | A/G | single | intron | 13 | 1000GENOMES,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.466423 |
TXNRD2 | chr22 | 19912626 | 19912627 | rs144844607 | + | G | A/G | single | intron | 2 | 1000GENOMES,GMI, | 2 | 0.016529 |
TXNRD2 | chr22 | 19912629 | 19912630 | rs148585035 | + | G | A/G | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.020661 |
TXNRD2 | chr22 | 19912661 | 19912662 | rs142944462 | + | A | A/C | single | intron | 3 | 1000GENOMES,SSMP,TISHKOFF, | 2 | 0.972911 |
TXNRD2 | chr22 | 19912667 | 19912668 | rs111619820 | + | A | A/G | single | intron | 4 | 1000GENOMES,BUSHMAN,SSMP,TISHKOFF, | 2 | 0.967416 |
TXNRD2 | chr22 | 19912670 | 19912671 | rs139231006 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.014692 |
TXNRD2 | chr22 | 19912675 | 19912676 | rs79684681 | + | A | A/G | single | intron | 4 | 1000GENOMES,ENSEMBL,PJP,SSMP, | 2 | 0.904587 |
TXNRD2 | chr22 | 19912676 | 19912677 | rs9606181 | + | T | G/T | single | intron | 6 | 1000GENOMES,ENSEMBL,PJP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.158570 |
TXNRD2 | chr22 | 19912686 | 19912687 | rs190801791 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.022039 |
TXNRD2 | chr22 | 19912774 | 19912775 | rs150076234 | + | C | C/T | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.988522 |
TXNRD2 | chr22 | 19912785 | 19912786 | rs113948634 | + | G | A/G | single | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,SSMP,TISHKOFF, | 2 | 0.030275 |
TXNRD2 | chr22 | 19913092 | 19913093 | rs5993871 | + | A | A/G | single | intron | 10 | 1000GENOMES,BCMHGSC_JDW,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,SC_SNP,SSMP,TISHKOFF, | 2 | 0.778643 |
TXNRD2 | chr22 | 19913097 | 19913098 | rs5993872 | + | A | A/C | single | intron | 12 | 1000GENOMES,BCMHGSC_JDW,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,SC_SNP,SSMP,TISHKOFF, | 2 | 0.765678 |
TXNRD2 | chr22 | 19913194 | 19913195 | rs200683723 | + | C | -/C | deletion | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.012397 |
TXNRD2 | chr22 | 19913460 | 19913461 | rs141416386 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.016070 |
TXNRD2 | chr22 | 19913487 | 19913488 | rs5993873 | + | A | A/G | single | intron | 12 | 1000GENOMES,BCM_SSAHASNP,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.395338 |
TXNRD2 | chr22 | 19913725 | 19913726 | rs5993874 | + | G | A/G | single | intron | 12 | 1000GENOMES,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PJP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.682047 |
TXNRD2 | chr22 | 19913740 | 19913741 | rs7285277 | + | G | A/G | single | intron | 9 | 1000GENOMES,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,PJP,SSMP,TISHKOFF, | 2 | 0.215265 |
TXNRD2 | chr22 | 19913904 | 19913905 | rs5748475 | + | T | C/T | single | intron | 10 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI,HUMANGENOME_JCVI,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.602652 |
TXNRD2 | chr22 | 19914029 | 19914030 | rs5748476 | + | C | C/T | single | intron | 4 | 1000GENOMES,GMI,SC_SNP,SSMP, | 2 | 0.973532 |
TXNRD2 | chr22 | 19914235 | 19914236 | rs5748477 | + | C | C/G | single | intron | 13 | 1000GENOMES,ABI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_SNP,SSAHASNP, | 2 | 0.397166 |
TXNRD2 | chr22 | 19914310 | 19914311 | rs9606182 | + | A | A/C | single | intron | 11 | 1000GENOMES,BCMHGSC_JDW,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PJP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.622823 |
TXNRD2 | chr22 | 19914354 | 19914355 | rs116586974 | + | C | A/C/T | single | intron | 3 | 1000GENOMES,SSMP,TISHKOFF, | 2 | 0.988676 |
TXNRD2 | chr22 | 19914853 | 19914854 | rs17210001 | + | T | C/T | single | intron | 8 | 1000GENOMES,AFFY,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.139252 |
TXNRD2 | chr22 | 19915189 | 19915190 | rs34983191 | - | A | C/T | single | intron | 1 | SNP500CANCER, | 2 | 0.042000 |
TXNRD2 | chr22 | 19915325 | 19915326 | rs5993875 | + | A | A/G | single | intron | 21 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SC_SNP,SNP500CANCER,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.317068 |
TXNRD2 | chr22 | 19915432 | 19915433 | rs16982760 | + | A | A/G | single | intron | 7 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,HGSV,PERLEGEN,SNP500CANCER,TISHKOFF, | 2 | 0.963445 |
TXNRD2 | chr22 | 19915679 | 19915680 | rs7287604 | + | C | C/T | single | intron | 14 | 1000GENOMES,ABI,AFFY,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,HGSV,ILLUMINA-UK,KRIBB_YJKIM,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.778979 |
TXNRD2 | chr22 | 19915917 | 19915918 | rs77959191 | + | C | A/C | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.016040 |
TXNRD2 | chr22 | 19915938 | 19915939 | rs7290448 | + | G | A/G | single | intron | 15 | 1000GENOMES,ABI,AFFY,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KRIBB_YJKIM,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.225272 |
TXNRD2 | chr22 | 19916303 | 19916304 | rs113291654 | + | C | C/T | single | intron | 4 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.962878 |
TXNRD2 | chr22 | 19916706 | 19916707 | rs35678306 | + | G | A/G | single | intron | 7 | 1000GENOMES,ABI,COMPLETE_GENOMICS,ENSEMBL,HUMANGENOME_JCVI,SSMP,TISHKOFF, | 2 | 0.214090 |
TXNRD2 | chr22 | 19916817 | 19916818 | rs5993876 | + | C | C/G | single | intron | 8 | 1000GENOMES,BCMHGSC_JDW,BL,COMPLETE_GENOMICS,GMI,SC_SNP,SSMP,TISHKOFF, | 2 | 0.625573 |
TXNRD2 | chr22 | 19917012 | 19917013 | rs5748478 | + | C | C/T | single | intron | 17 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KRIBB_YJKIM,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.320388 |
TXNRD2 | chr22 | 19917266 | 19917267 | rs74759023 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.010889 |
TXNRD2 | chr22 | 19917340 | 19917340 | rs3842462 | + | - | -/C | insertion | intron | 11 | 1000GENOMES,ABI,BILGI_BIOE,BL,BUSHMAN,GMI,HGSV,HUMANGENOME_JCVI,LUNTER,TISHKOFF,YUSUKE, | 2 | 0.399267 |
TXNRD2 | chr22 | 19917855 | 19917856 | rs4333017 | + | C | C/T | single | intron | 8 | 1000GENOMES,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,PERLEGEN,SC_JCM,SSMP, | 2 | 0.926527 |
TXNRD2 | chr22 | 19918157 | 19918158 | rs112707785 | + | C | C/T | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.987609 |
TXNRD2 | chr22 | 19918230 | 19918231 | rs9617850 | + | G | A/G | single | intron | 15 | 1000GENOMES,ABI,AFFY,BUSHMAN,COMPLETE_GENOMICS,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.241079 |
TXNRD2 | chr22 | 19918370 | 19918371 | rs114490696 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.011324 |
TXNRD2 | chr22 | 19918722 | 19918723 | rs79960807 | + | G | A/G | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.014795 |
TXNRD2 | chr22 | 19919232 | 19919233 | rs2871046 | + | C | C/G | single | intron | 7 | 1000GENOMES,ABI,GMI,SC_JCM,SNP500CANCER,SSMP,TSC-CSHL, | 2 | 0.867749 |
TXNRD2 | chr22 | 19919288 | 19919289 | rs12158192 | + | G | A/G | single | intron | 4 | 1000GENOMES,SC_SNP,SNP500CANCER,TISHKOFF, | 2 | 0.018948 |
TXNRD2 | chr22 | 19919390 | 19919391 | rs72556513 | - | A | C/T | single | intron | 4 | 1000GENOMES,BUSHMAN,SNP500CANCER,TISHKOFF, | 2 | 0.011592 |
TXNRD2 | chr22 | 19919404 | 19919405 | rs4485648 | + | T | C/T | single | intron | 15 | 1000GENOMES,ABI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,HGSV,HUMANGENOME_JCVI,PJP,SC_JCM,SNP500CANCER,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.227007 |
TXNRD2 | chr22 | 19919465 | 19919466 | rs72554693 | - | A | C/T | single | intron | 3 | 1000GENOMES,SNP500CANCER,TISHKOFF, | 2 | 0.012781 |
TXNRD2 | chr22 | 19919467 | 19919468 | rs72550765 | - | G | C/T | single | intron | 5 | 1000GENOMES,COMPLETE_GENOMICS,GMI,SNP500CANCER,SSMP, | 2 | 0.922601 |
TXNRD2 | chr22 | 19919600 | 19919601 | rs9605029 | + | G | A/G | single | intron | 7 | 1000GENOMES,BL,COMPLETE_GENOMICS,GMI,SC_SNP,SSMP,TISHKOFF, | 2 | 0.357798 |
TXNRD2 | chr22 | 19919608 | 19919609 | rs4497958 | + | G | A/G | single | intron | 11 | 1000GENOMES,ABI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,HGSV,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.231016 |
TXNRD2 | chr22 | 19919639 | 19919640 | rs5993877 | + | C | C/T | single | intron | 3 | 1000GENOMES,SC_SNP,TISHKOFF, | 2 | 0.974747 |
TXNRD2 | chr22 | 19919661 | 19919662 | rs4626020 | + | A | A/C | single | intron | 12 | 1000GENOMES,ABI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,HGSV,HUMANGENOME_JCVI,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.780622 |
TXNRD2 | chr22 | 19920228 | 19920229 | rs73385608 | + | G | A/G | single | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA-UK,SSMP, | 2 | 0.042163 |
TXNRD2 | chr22 | 19920288 | 19920289 | rs79103769 | + | G | G/T | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.987156 |
TXNRD2 | chr22 | 19920331 | 19920332 | rs113919066 | + | C | -/C | deletion | intron | 4 | 1000GENOMES,BUSHMAN,LUNTER,TISHKOFF, | 2 | 0.015138 |
TXNRD2 | chr22 | 19920358 | 19920359 | rs9606186 | + | C | C/G | single | intron | 18 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PERLEGEN,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.362763 |
TXNRD2 | chr22 | 19920436 | 19920437 | rs113571049 | + | T | A/T | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.012844 |
TXNRD2 | chr22 | 19920645 | 19920646 | rs5746846 | + | C | C/G | single | intron | 14 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.417532 |
TXNRD2 | chr22 | 19920656 | 19920657 | rs73880017 | + | C | A/C | single | intron | 4 | 1000GENOMES,ILLUMINA,ILLUMINA-UK,SSMP, | 2 | 0.017890 |
TXNRD2 | chr22 | 19920939 | 19920940 | rs74397767 | + | G | A/G | single | intron | 4 | 1000GENOMES,BUSHMAN,RWHITE,TISHKOFF, | 2 | 0.012385 |
TXNRD2 | chr22 | 19920948 | 19920949 | rs10483103 | + | G | A/G | single | intron | 10 | 1000GENOMES,ABI,AFFY,CSHL-HAPMAP,GMI,ILLUMINA,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.241635 |
TXNRD2 | chr22 | 19921002 | 19921003 | rs5746847 | + | T | C/T | single | intron | 20 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.701913 |
TXNRD2 | chr22 | 19921102 | 19921103 | rs9618716 | + | T | C/T | single | intron | 7 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,ILLUMINA,KRIBB_YJKIM,SC_SNP,TISHKOFF, | 2 | 0.052395 |
TXNRD2 | chr22 | 19921113 | 19921114 | rs79987203 | + | C | C/T | single | intron | 3 | 1000GENOMES,RWHITE,TISHKOFF, | 2 | 0.988062 |
TXNRD2 | chr22 | 19921136 | 19921137 | rs9605030 | + | C | C/T | single | intron | 8 | 1000GENOMES,BL,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SC_SNP,SSMP, | 2 | 0.857559 |
TXNRD2 | chr22 | 19921194 | 19921195 | rs73880018 | + | A | A/G | single | intron | 4 | 1000GENOMES,ILLUMINA-UK,RWHITE,SSMP, | 2 | 0.982110 |
TXNRD2 | chr22 | 19921377 | 19921378 | rs9605031 | + | C | C/T | single | intron | 12 | 1000GENOMES,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,KRIBB_YJKIM,SC_SNP,SSMP,TISHKOFF, | 2 | 0.776869 |
TXNRD2 | chr22 | 19921516 | 19921518 | rs151191491 | + | AG | -/AG | deletion | intron | 2 | 1000GENOMES,LUNTER, | 2 | 0.014692 |
TXNRD2 | chr22 | 19921640 | 19921641 | rs8140265 | + | G | A/G | single | intron | 13 | 1000GENOMES,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.223023 |
TXNRD2 | chr22 | 19921824 | 19921825 | rs5748480 | + | A | A/G | single | intron | 17 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.538848 |
TXNRD2 | chr22 | 19921977 | 19921978 | rs9618717 | + | A | A/G | single | intron | 12 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.541209 |
TXNRD2 | chr22 | 19922342 | 19922343 | rs5748481 | + | T | A/T | single | intron | 10 | 1000GENOMES,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,PJP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.228126 |
TXNRD2 | chr22 | 19922373 | 19922374 | rs5748482 | + | C | C/T | single | intron | 11 | 1000GENOMES,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,PJP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.766835 |
TXNRD2 | chr22 | 19922445 | 19922446 | rs5748483 | + | A | A/G | single | intron | 16 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.333979 |
TXNRD2 | chr22 | 19922486 | 19922487 | rs139036179 | + | T | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.012397 |
TXNRD2 | chr22 | 19922542 | 19922543 | rs12483995 | + | C | C/T | single | intron | 6 | 1000GENOMES,ABI,CSHL-HAPMAP,GMI,SSMP,TISHKOFF, | 2 | 0.868687 |
TXNRD2 | chr22 | 19922584 | 19922585 | rs5748484 | + | C | C/T | single | intron | 7 | 1000GENOMES,BCMHGSC_JDW,BL,GMI,PJP,SC_SNP,SSMP, | 2 | 0.774827 |
TXNRD2 | chr22 | 19922595 | 19922596 | rs144802689 | + | A | A/G | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.988981 |
TXNRD2 | chr22 | 19922604 | 19922605 | rs5993878 | + | G | A/G | single | intron | 3 | 1000GENOMES,SC_SNP,TISHKOFF, | 2 | 0.017890 |
TXNRD2 | chr22 | 19923152 | 19923153 | rs6518589 | + | T | C/T | single | intron | 17 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.579863 |
TXNRD2 | chr22 | 19923405 | 19923406 | rs5746848 | + | T | C/T | single | intron | 19 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PERLEGEN,SC_SNP,SNP500CANCER,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 3 | 0.563941 |
TXNRD2 | chr22 | 19923414 | 19923415 | rs5748485 | + | A | A/G | single | intron | 19 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,SC_SNP,SNP500CANCER,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.319423 |
TXNRD2 | chr22 | 19923429 | 19923430 | rs55733201 | + | G | C/G | single | intron | 3 | 1000GENOMES,HGSV,SNP500CANCER, | 2 | 0.019335 |
TXNRD2 | chr22 | 19923440 | 19923441 | rs5748486 | + | C | C/G | single | intron | 16 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_SNP,SNP500CANCER,SSMP,TISHKOFF, | 2 | 0.337442 |
TXNRD2 | chr22 | 19923524 | 19923525 | rs139511379 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.012397 |
TXNRD2 | chr22 | 19923731 | 19923732 | rs76961663 | + | G | A/G | single | intron | 4 | 1000GENOMES,GMI,SSMP,TISHKOFF, | 2 | 0.138544 |
TXNRD2 | chr22 | 19924020 | 19924021 | rs6518591 | + | A | A/G | single | intron | 17 | 1000GENOMES,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SC_SNP,SNP500CANCER,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.773821 |
TXNRD2 | chr22 | 19924483 | 19924484 | rs9618719 | + | C | C/T | single | intron | 6 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,ILLUMINA,SC_SNP,TISHKOFF, | 2 | 0.963349 |
TXNRD2 | chr22 | 19924537 | 19924538 | rs5748487 | + | T | G/T | single | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.577889 |
TXNRD2 | chr22 | 19924578 | 19924579 | rs11705619 | + | T | C/T | single | intron | 11 | 1000GENOMES,ABI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,ILLUMINA,KRIBB_YJKIM,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.119471 |
TXNRD2 | chr22 | 19924611 | 19924612 | rs9606189 | + | G | C/G | single | intron | 10 | 1000GENOMES,AFFY,BCMHGSC_JDW,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PJP,SC_SNP, | 2 | 0.222905 |
TXNRD2 | chr22 | 19924664 | 19924665 | rs73385635 | + | C | C/T | single | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA-UK,SSMP, | 2 | 0.960587 |
TXNRD2 | chr22 | 19924888 | 19924889 | rs112964171 | + | G | G/T | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.987156 |
TXNRD2 | chr22 | 19924896 | 19924897 | rs73385636 | + | G | G/T | single | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA-UK,SSMP, | 2 | 0.968378 |
TXNRD2 | chr22 | 19925165 | 19925166 | rs73880021 | + | G | A/G | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.038073 |
TXNRD2 | chr22 | 19925271 | 19925272 | rs117018827 | + | C | C/T | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.981723 |
TXNRD2 | chr22 | 19925301 | 19925302 | rs80137494 | + | C | C/T | single | intron | 3 | 1000GENOMES,SSMP,TISHKOFF, | 2 | 0.987369 |
TXNRD2 | chr22 | 19925413 | 19925414 | rs2078748 | + | A | A/G | single | intron | 11 | 1000GENOMES,ABI,BCMHGSC_JDW,COMPLETE_GENOMICS,ENSEMBL,GMI,PJP,SC_JCM,SC_SNP,SSMP,TSC-CSHL, | 2 | 0.780018 |
TXNRD2 | chr22 | 19925570 | 19925571 | rs73385638 | + | A | A/C | single | intron | 5 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA,ILLUMINA-UK,SSMP, | 2 | 0.961045 |
TXNRD2 | chr22 | 19925966 | 19925980 | rs148950828 | + | ACCATACACATTCA | -/ACCATACACATTC | deletion | intron | 2 | 1000GENOMES,LUNTER, | 2 | 0.124885 |
TXNRD2 | chr22 | 19925998 | 19925999 | rs55704968 | + | C | C/T | single | intron | 5 | 1000GENOMES,COMPLETE_GENOMICS,HGSV,ILLUMINA-UK,SSMP, | 2 | 0.960587 |
TXNRD2 | chr22 | 19926003 | 19926004 | rs9606190 | + | T | C/T | single | intron | 11 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,PJP,SC_SNP,SSMP, | 2 | 0.219982 |
TXNRD2 | chr22 | 19926330 | 19926331 | rs2871047 | + | G | A/G | single | intron | 7 | 1000GENOMES,GMI,PERLEGEN,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.133186 |
TXNRD2 | chr22 | 19926718 | 19926718 | rs34433567 | + | - | -/A | insertion | intron | 9 | 1000GENOMES,ABI,BUSHMAN,HGSV,HUMANGENOME_JCVI,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 0.783226 |
TXNRD2 | chr22 | 19927124 | 19927125 | rs72550816 | - | G | -/C | deletion | intron | 4 | 1000GENOMES,LUNTER,SNP500CANCER,TISHKOFF, | 2 | 0.034082 |
TXNRD2 | chr22 | 19927145 | 19927146 | rs5748489 | + | A | A/C | single | intron | 19 | 1000GENOMES,ABI,AFFY,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SC_SNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.308264 |
TXNRD2 | chr22 | 19927187 | 19927188 | rs143721127 | + | G | C/G | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.034435 |
TXNRD2 | chr22 | 19927286 | 19927287 | rs114214004 | + | G | G/T | single | intron,near-gene-5 | 1 | 1000GENOMES, | 2 | 0.986498 |
TXNRD2 | chr22 | 19927692 | 19927693 | rs9332311 | + | G | A/G | single | intron,near-gene-5 | 9 | 1000GENOMES,BCMHGSC_JDW,BL,COMPLETE_GENOMICS,EGP_SNPS,GMI,PJP,SC_SNP,SSMP, | 2 | 0.217373 |
TXNRD2 | chr22 | 19927999 | 19928000 | rs9332314 | + | C | C/T | single | intron,near-gene-5 | 5 | 1000GENOMES,EGP_SNPS,ILLUMINA,KRIBB_YJKIM,SNP500CANCER, | 2 | 0.974972 |
TXNRD2 | chr22 | 19928021 | 19928022 | rs1800706 | + | G | A/G | single | intron,near-gene-5 | 15 | 1000GENOMES,BCMHGSC_JDW,BL,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HGBASE,ILLUMINA,RIKENSNPRC,SC_SNP,SNP500CANCER,SSMP,TISHKOFF,YUSUKE, | 2 | 0.217680 |
TXNRD2 | chr22 | 19928091 | 19928092 | rs2075507 | + | G | A/G | single | intron,near-gene-5 | 26 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGBASE,HGSV,ILLUMINA-UK,KIDDLAB,PHARMGKB_PPII,PJP,RIKENSNPRC,SC_JCM,SC_SNP,SNP500CANCER,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP,YUSUKE, | 2 | 0.642659 |
TXNRD2 | chr22 | 19928198 | 19928199 | rs9332315 | + | T | C/T | single | intron,near-gene-5 | 6 | 1000GENOMES,EGP_SNPS,ILLUMINA,KRIBB_YJKIM,SNP500CANCER,SSMP, | 2 | 0.011201 |
TXNRD2 | chr22 | 19928324 | 19928325 | rs45478499 | + | G | A/G | single | intron,near-gene-5 | 3 | 1000GENOMES,PHARMGKB_PPII,TISHKOFF, | 2 | 0.011527 |
TXNRD2 | chr22 | 19928353 | 19928354 | rs45521239 | + | G | A/G | single | intron,near-gene-5 | 3 | 1000GENOMES,PHARMGKB_PPII,TISHKOFF, | 2 | 0.010807 |
TXNRD2 | chr22 | 19928581 | 19928582 | rs45551837 | + | G | A/G | single | intron,near-gene-5 | 6 | 1000GENOMES,COMPLETE_GENOMICS,HGSV,ILLUMINA-UK,PHARMGKB_PPII,SSMP, | 2 | 0.038497 |
TXNRD2 | chr22 | 19928631 | 19928632 | rs138696259 | + | C | C/G | single | intron,near-gene-5 | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.987144 |
TXNRD2 | chr22 | 19928805 | 19928806 | rs4646310 | + | G | A/G | single | intron,near-gene-5 | 16 | 1000GENOMES,ABI,COMPLETE_GENOMICS,CSHL-HAPMAP,HUMANGENOME_JCVI,ILLUMINA,IMCJ-GDT,KRIBB_YJKIM,KYUGEN,PHARMGKB_PPII,PJP,RIKENSNPRC,SNP500CANCER,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.110362 |
TXNRD2 | chr22 | 19928883 | 19928884 | rs2020917 | + | C | C/T | single | intron,near-gene-5 | 16 | 1000GENOMES,BRINCOR,COMPLETE_GENOMICS,GMI,ILLUMINA,IMCJ-GDT,KRIBB_YJKIM,KYUGEN,PHARMGKB_PPII,RIKENSNPRC,SC_SNP,SI_EXO,SNP500CANCER,SSMP,TISHKOFF,YUSUKE, | 2 | 0.776523 |
TXNRD2 | chr22 | 19928945 | 19928946 | rs45559342 | + | G | A/G | single | intron,near-gene-5 | 5 | 1000GENOMES,BUSHMAN,ILLUMINA,PHARMGKB_PPII,SNP500CANCER, | 2 | 0.011646 |
TXNRD2 | chr22 | 19929026 | 19929027 | rs13306278 | + | C | C/T | single | intron,near-gene-5 | 11 | 1000GENOMES,BCMHGSC_JDW,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,IMCJ-GDT,PHARMGKB_PPII,PJP,SI_EXO,SSMP, | 2 | 0.917507 |
TXNRD2 | chr22 | 19929141 | 19929141 | rs45511293 | + | - | -/G | insertion | intron,near-gene-5 | 4 | 1000GENOMES,LUNTER,PHARMGKB_PPII,TISHKOFF, | 2 | 0.953761 |
XDH | chr2 | 31557268 | 31557269 | rs6752058 | + | C | A/C/G | single | untranslated-3 | 12 | 1000GENOMES,BCM-HGSC-SUB,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PERLEGEN,SSMP,TISHKOFF, | 3 | 0.247817 |
XDH | chr2 | 31557307 | 31557308 | rs1054889 | + | G | A/G | single | untranslated-3 | 18 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,LEE,PERLEGEN,PJP,SSMP,TSC-CSHL,YUSUKE, | 2 | 0.429583 |
XDH | chr2 | 31557346 | 31557347 | rs6710015 | + | T | C/T | single | untranslated-3 | 17 | 1000GENOMES,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF, | 3 | 0.436189 |
XDH | chr2 | 31557742 | 31557743 | rs45488100 | - | T | A/G | single | untranslated-3 | 7 | 1000GENOMES,BUSHMAN,EGP_SNPS,GMI,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.968354 |
XDH | chr2 | 31557945 | 31557946 | rs45532535 | - | A | C/T | single | untranslated-3 | 2 | 1000GENOMES,EGP_SNPS, | 2 | 0.016652 |
XDH | chr2 | 31558115 | 31558117 | rs10590467 | + | AG | -/AG | deletion | untranslated-3 | 11 | 1000GENOMES,ABI,BCMHGSC_JDW,DEVINE_LAB,EGP_SNPS,GMI,HGSV,HUMANGENOME_JCVI,LUNTER,PJP,SSMP, | 2 | 0.116456 |
XDH | chr2 | 31558305 | 31558306 | rs1042039 | + | T | C/T | single | untranslated-3 | 20 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,LEE,PERLEGEN,PJP,SSMP,TSC-CSHL, | 3 | 0.466131 |
XDH | chr2 | 31558782 | 31558783 | rs45593434 | - | C | C/G | single | untranslated-3 | 8 | 1000GENOMES,BUSHMAN,EGP_SNPS,GMI,ILLUMINA,NHLBI-ESP,SSMP,TISHKOFF, | 2 | 0.033249 |
XDH | chr2 | 31559094 | 31559095 | rs2268800 | + | G | C/G | single | intron | 16 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,EGP_SNPS,ENSEMBL,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PJP,SSMP,YUSUKE, | 2 | 0.445286 |
XDH | chr2 | 31559676 | 31559677 | rs202047649 | + | T | -/T | deletion | intron | 1 | 1000GENOMES, | 2 | 0.020661 |
XDH | chr2 | 31559688 | 31559689 | rs207436 | - | A | C/T | single | intron | 13 | 1000GENOMES,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,ILLUMINA-UK,KWOK,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.976691 |
XDH | chr2 | 31559950 | 31559951 | rs2268801 | + | C | C/T | single | intron | 8 | 1000GENOMES,EGP_SNPS,ENSEMBL,GMI,ILLUMINA,SSMP,TISHKOFF,YUSUKE, | 2 | 0.922716 |
XDH | chr2 | 31560148 | 31560149 | rs115102142 | + | A | A/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.979530 |
XDH | chr2 | 31560381 | 31560382 | rs10188919 | + | T | C/T | single | intron | 7 | 1000GENOMES,EGP_SNPS,HGSV,ILLUMINA-UK,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.011844 |
XDH | chr2 | 31560571 | 31560572 | rs45564939 | - | G | C/T | single | missense | 6 | 1000GENOMES,CLINSEQ_SNP,EGP_SNPS,EXOME_CHIP,ILLUMINA,NHLBI-ESP, | 2 | 0.989163 |
XDH | chr2 | 31560616 | 31560617 | rs181743036 | + | C | C/T | single | missense | 1 | 1000GENOMES, | 2 | 0.975666 |
XDH | chr2 | 31560950 | 31560951 | rs45505391 | - | A | C/T | single | intron | 5 | 1000GENOMES,COMPLETE_GENOMICS,EGP_SNPS,HGSV,TISHKOFF, | 2 | 0.018628 |
XDH | chr2 | 31561528 | 31561529 | rs80327583 | + | T | C/T | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.017431 |
XDH | chr2 | 31561620 | 31561621 | rs112521097 | + | G | A/G | single | intron | 5 | 1000GENOMES,BL,COMPLETE_GENOMICS,GMI,SSMP, | 2 | 0.428048 |
XDH | chr2 | 31561734 | 31561735 | rs207439 | - | A | C/T | single | intron | 14 | 1000GENOMES,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HUMANGENOME_JCVI,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.979433 |
XDH | chr2 | 31561795 | 31561796 | rs138572729 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.016988 |
XDH | chr2 | 31561865 | 31561866 | rs141674738 | + | C | C/T | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.928834 |
XDH | chr2 | 31561926 | 31561927 | rs113295448 | + | G | G/T | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.982569 |
XDH | chr2 | 31562411 | 31562412 | rs207440 | - | C | A/G | single | coding-synon | 16 | 1000GENOMES,APPLERA_GI,BUSHMAN,CLINSEQ_SNP,EGP_SNPS,ILLUMINA,KRIBB_YJKIM,KWOK,NHLBI-ESP,PHARMGKB_AB_DME,SC_JCM,SEATTLESEQ,SI_EXO,SNP500CANCER,SSMP,TISHKOFF, | 2 | 0.052303 |
XDH | chr2 | 31563013 | 31563014 | rs207441 | - | A | G/T | single | intron | 22 | 1000GENOMES,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.981235 |
XDH | chr2 | 31563106 | 31563107 | rs45539633 | - | C | G/T | single | intron | 3 | 1000GENOMES,EGP_SNPS,HGSV, | 2 | 0.984362 |
XDH | chr2 | 31563116 | 31563117 | rs45463093 | - | T | A/G | single | intron | 5 | 1000GENOMES,COMPLETE_GENOMICS,EGP_SNPS,HGSV,TISHKOFF, | 2 | 0.977618 |
XDH | chr2 | 31563397 | 31563398 | rs207442 | - | G | C/G | single | intron | 17 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.019169 |
XDH | chr2 | 31563475 | 31563476 | rs11893429 | + | C | C/T | single | intron | 4 | 1000GENOMES,CSHL-HAPMAP,EGP_SNPS,TISHKOFF, | 2 | 0.979846 |
XDH | chr2 | 31563796 | 31563797 | rs207444 | - | A | C/T | single | intron | 27 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SNP500CANCER,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.981973 |
XDH | chr2 | 31563884 | 31563885 | rs207445 | + | C | C/T | single | intron | 10 | 1000GENOMES,AFFY,BUSHMAN,EGP_SNPS,KRIBB_YJKIM,KWOK,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.962530 |
XDH | chr2 | 31564304 | 31564305 | rs35059671 | + | T | C/T | single | intron | 8 | 1000GENOMES,ABI,BUSHMAN,EGP_SNPS,ENSEMBL,ILLUMINA,NHLBI-ESP,TISHKOFF, | 2 | 0.019377 |
XDH | chr2 | 31564897 | 31564898 | rs10084228 | + | C | C/T | single | intron | 5 | 1000GENOMES,EGP_SNPS,ILLUMINA-UK,TISHKOFF,WI_SSAHASNP, | 2 | 0.988186 |
XDH | chr2 | 31565315 | 31565316 | rs35235275 | + | C | C/T | single | intron | 13 | 1000GENOMES,BCM-HGSC-SUB,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.778390 |
XDH | chr2 | 31565359 | 31565360 | rs12614330 | + | C | C/T | single | intron | 12 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,ILLUMINA,SSMP, | 2 | 0.546650 |
XDH | chr2 | 31565364 | 31565365 | rs45598233 | - | C | A/G | single | intron | 2 | 1000GENOMES,EGP_SNPS, | 2 | 0.011064 |
XDH | chr2 | 31565438 | 31565439 | rs45471493 | - | A | A/T | single | intron | 3 | 1000GENOMES,EGP_SNPS,TISHKOFF, | 2 | 0.015345 |
XDH | chr2 | 31565576 | 31565576 | rs11465197 | + | - | -/A | insertion | intron | 12 | 1000GENOMES,BILGI_BIOE,BL,BUSHMAN,DEVINE_LAB,GMI,HGSV,HUMANGENOME_JCVI,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 0.019707 |
XDH | chr2 | 31565602 | 31565604 | rs45564545 | - | GA | -/TC | deletion | intron | 11 | 1000GENOMES,BILGI_BIOE,BL,DEVINE_LAB,EGP_SNPS,GMI,HUMANGENOME_JCVI,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 0.980786 |
XDH | chr2 | 31566002 | 31566003 | rs207447 | - | C | A/G | single | intron | 4 | 1000GENOMES,BUSHMAN,KWOK,SC_JCM, | 2 | 0.012844 |
XDH | chr2 | 31566021 | 31566022 | rs207448 | - | C | C/G | single | intron | 20 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KWOK,PJP,SC_JCM,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.980383 |
XDH | chr2 | 31566075 | 31566076 | rs111830531 | + | T | C/T | single | intron | 2 | 1000GENOMES,BUSHMAN, | 2 | 0.017431 |
XDH | chr2 | 31566123 | 31566124 | rs169596 | - | G | C/T | single | intron | 13 | 1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,ILLUMINA,KRIBB_YJKIM,KWOK,SC_JCM,SSMP,TISHKOFF, | 2 | 0.555876 |
XDH | chr2 | 31566296 | 31566299 | rs199694787 | + | TTG | -/TTG | deletion | intron | 1 | 1000GENOMES, | 2 | 0.013774 |
XDH | chr2 | 31566535 | 31566536 | rs207449 | - | T | A/G | single | intron | 9 | 1000GENOMES,BGI,BL,GMI,KWOK,PJP,SC_JCM,SSMP,WI_SSAHASNP, | 2 | 0.020505 |
XDH | chr2 | 31566635 | 31566636 | rs45449406 | - | G | A/C | single | intron | 2 | 1000GENOMES,EGP_SNPS, | 2 | 0.013102 |
XDH | chr2 | 31567046 | 31567047 | rs207450 | - | T | A/C | single | intron | 20 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.018868 |
XDH | chr2 | 31567242 | 31567243 | rs207451 | - | C | G/T | single | intron | 20 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.018464 |
XDH | chr2 | 31567288 | 31567289 | rs45613632 | - | T | A/G | single | intron | 3 | 1000GENOMES,BUSHMAN,EGP_SNPS, | 2 | 0.985605 |
XDH | chr2 | 31567297 | 31567298 | rs207452 | - | T | A/C | single | intron | 20 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.018916 |
XDH | chr2 | 31567631 | 31567632 | rs207454 | - | T | A/C | single | intron | 15 | 1000GENOMES,BCM_SSAHASNP,BGI,CLINSEQ_SNP,COMPLETE_GENOMICS,EGP_SNPS,GMI,ILLUMINA,KWOK,NHLBI-ESP,SC_JCM,SI_EXO,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.855561 |
XDH | chr2 | 31567926 | 31567927 | rs45549632 | - | C | A/G | single | intron | 6 | 1000GENOMES,EGP_SNPS,GMI,HGSV,ILLUMINA,SSMP, | 2 | 0.030136 |
XDH | chr2 | 31567928 | 31567929 | rs207455 | + | G | A/G | single | intron | 27 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.925726 |
XDH | chr2 | 31568245 | 31568246 | rs45555737 | - | C | C/G | single | intron | 3 | 1000GENOMES,EGP_SNPS,GMI, | 2 | 0.021151 |
XDH | chr2 | 31568347 | 31568348 | rs7595188 | + | A | A/G | single | intron | 10 | 1000GENOMES,AFFY,EGP_SNPS,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.938858 |
XDH | chr2 | 31568360 | 31568361 | rs4951978 | + | T | C/T | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,ILLUMINA,PJP,SC_SNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.606073 |
XDH | chr2 | 31568564 | 31568565 | rs45472702 | - | G | C/T | single | intron | 2 | BUSHMAN,EGP_SNPS, | 2 | 0.989474 |
XDH | chr2 | 31568607 | 31568608 | rs7583231 | + | T | C/T | single | intron | 6 | 1000GENOMES,EGP_SNPS,GMI,ILLUMINA,SSMP,WI_SSAHASNP, | 2 | 0.020270 |
XDH | chr2 | 31568725 | 31568726 | rs9308919 | + | T | C/T | single | intron | 24 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SC_SNP,SNP500CANCER,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.790751 |
XDH | chr2 | 31568913 | 31568914 | rs45444396 | - | T | A/C | single | intron | 3 | 1000GENOMES,EGP_SNPS,TISHKOFF, | 2 | 0.984362 |
XDH | chr2 | 31569207 | 31569208 | rs45481596 | - | C | A/G | single | intron | 4 | 1000GENOMES,BUSHMAN,EGP_SNPS,ILLUMINA, | 2 | 0.016568 |
XDH | chr2 | 31569304 | 31569305 | rs7598968 | + | A | A/G | single | intron | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.205734 |
XDH | chr2 | 31569309 | 31569310 | rs10188839 | + | G | A/G | single | intron | 10 | 1000GENOMES,BCMHGSC_JDW,EGP_SNPS,ENSEMBL,HGSV,ILLUMINA,ILLUMINA-UK,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.074215 |
XDH | chr2 | 31569373 | 31569374 | rs7572658 | + | C | C/G | single | intron | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.206998 |
XDH | chr2 | 31569470 | 31569471 | rs7599175 | + | A | A/G | single | intron | 22 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KRIBB_YJKIM,PJP,SI_EXO,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.202575 |
XDH | chr2 | 31569592 | 31569593 | rs114439502 | + | C | A/C | single | intron | 4 | 1000GENOMES,ILLUMINA,NHLBI-ESP,TISHKOFF, | 2 | 0.011324 |
XDH | chr2 | 31569659 | 31569660 | rs45547640 | - | T | A/C | single | missense | 5 | 1000GENOMES,EGP_SNPS,EXOME_CHIP,GMI,ILLUMINA, | 2 | 0.989380 |
XDH | chr2 | 31569746 | 31569747 | rs45511600 | - | C | A/G | single | intron | 5 | 1000GENOMES,BUSHMAN,EGP_SNPS,NHLBI-ESP,TISHKOFF, | 2 | 0.015293 |
XDH | chr2 | 31569922 | 31569923 | rs13409029 | + | G | A/G | single | intron | 8 | 1000GENOMES,BCMHGSC_JDW,EGP_SNPS,ENSEMBL,ILLUMINA-UK,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.066723 |
XDH | chr2 | 31570068 | 31570069 | rs1366811 | + | A | A/G | single | intron | 25 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KRIBB_YJKIM,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 2 | 0.217308 |
XDH | chr2 | 31570086 | 31570087 | rs45603333 | - | T | A/G | single | intron | 3 | 1000GENOMES,BUSHMAN,EGP_SNPS, | 2 | 0.983065 |
XDH | chr2 | 31570114 | 31570115 | rs1366812 | + | G | C/G | single | intron | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_JCM,SC_SNP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.653035 |
XDH | chr2 | 31570375 | 31570376 | rs1366813 | + | T | C/T | single | intron | 29 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,NHLBI-ESP,PJP,SC_JCM,SC_SNP,SI_EXO,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 2 | 0.778132 |
XDH | chr2 | 31570392 | 31570393 | rs45619033 | - | C | C/G | single | missense | 8 | 1000GENOMES,CORNELL,EGP_SNPS,EXOME_CHIP,ILLUMINA,NHLBI-ESP,PHARMGKB_AB_DME,SNP500CANCER, | 2 | 0.012859 |
XDH | chr2 | 31570589 | 31570590 | rs77716518 | + | G | C/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.011760 |
XDH | chr2 | 31570625 | 31570626 | rs4952083 | + | C | C/T | single | intron | 21 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,SI_EXO,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.194211 |
XDH | chr2 | 31570630 | 31570631 | rs4952084 | + | A | A/G | single | intron | 21 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,SI_EXO,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.193711 |
XDH | chr2 | 31570688 | 31570689 | rs4952085 | + | G | A/G | single | intron | 24 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.802216 |
XDH | chr2 | 31571026 | 31571027 | rs45452492 | - | C | A/G | single | intron | 4 | 1000GENOMES,BUSHMAN,EGP_SNPS,TISHKOFF, | 2 | 0.016129 |
XDH | chr2 | 31571196 | 31571197 | rs45604135 | - | G | C/T | single | coding-synon | 10 | 1000GENOMES,BUSHMAN,CLINSEQ_SNP,CORNELL,EGP_SNPS,ILLUMINA,NHLBI-ESP,PHARMGKB_AB_DME,SNP500CANCER,TISHKOFF, | 2 | 0.982947 |
XDH | chr2 | 31571240 | 31571241 | rs13415401 | + | G | C/G | single | intron | 20 | 1000GENOMES,BCM-HGSC-SUB,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,EGP_SNPS,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,NHLBI-ESP,PERLEGEN,PJP,SI_EXO,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.783663 |
XDH | chr2 | 31571430 | 31571431 | rs45521940 | - | C | A/G | single | intron | 5 | 1000GENOMES,BUSHMAN,EGP_SNPS,SSMP,TISHKOFF, | 2 | 0.018589 |
XDH | chr2 | 31571785 | 31571786 | rs1884725 | + | A | A/G | single | coding-synon | 30 | 1000GENOMES,ABI,APPLERA_GI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,NHLBI-ESP,PHARMGKB_AB_DME,PJP,SC_JCM,SEATTLESEQ,SI_EXO,SNP500CANCER,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 2 | 0.214128 |
XDH | chr2 | 31571869 | 31571870 | rs45517831 | - | T | A/G | single | intron | 1 | EGP_SNPS, | 2 | 0.989362 |
XDH | chr2 | 31571883 | 31571884 | rs45465405 | - | T | A/G | single | intron | 5 | 1000GENOMES,EGP_SNPS,NHLBI-ESP,SSMP,TISHKOFF, | 2 | 0.981826 |
XDH | chr2 | 31572075 | 31572076 | rs7557095 | + | A | A/C | single | intron | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.214195 |
XDH | chr2 | 31572184 | 31572185 | rs7583694 | + | C | C/G | single | intron | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.177834 |
XDH | chr2 | 31572397 | 31572398 | rs1429374 | + | A | A/G | single | intron | 18 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,PJP,SC_SNP,SSMP,TISHKOFF,TSC-CSHL,YUSUKE, | 2 | 0.357930 |
XDH | chr2 | 31572482 | 31572482 | rs11408029 | + | - | -/G/T | insertion | intron | 14 | 1000GENOMES,ABI,BILGI_BIOE,BL,BUSHMAN,DEVINE_LAB,EGP_SNPS,GMI,HGSV,HUMANGENOME_JCVI,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 0.193299 |
XDH | chr2 | 31572484 | 31572484 | rs199797389 | + | - | -/T | insertion | intron | 1 | 1000GENOMES, | 2 | 0.256657 |
XDH | chr2 | 31572731 | 31572732 | rs13419410 | + | C | C/T | single | intron | 13 | 1000GENOMES,BCMHGSC_JDW,BUSHMAN,CLINSEQ_SNP,EGP_SNPS,ENSEMBL,ILLUMINA,ILLUMINA-UK,NHLBI-ESP,SI_EXO,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.944674 |
XDH | chr2 | 31573345 | 31573346 | rs11680208 | + | A | A/G | single | intron | 17 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.280946 |
XDH | chr2 | 31573454 | 31573455 | rs11889858 | + | A | A/T | single | intron | 10 | 1000GENOMES,ABI,BCMHGSC_JDW,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,HGSV,PJP,SSMP,TISHKOFF, | 2 | 0.938240 |
XDH | chr2 | 31573519 | 31573520 | rs45583538 | - | A | C/T | single | intron | 6 | 1000GENOMES,EGP_SNPS,GMI,HGSV,ILLUMINA-UK,TISHKOFF, | 2 | 0.025869 |
XDH | chr2 | 31573736 | 31573737 | rs45561543 | - | C | A/G | single | intron | 10 | 1000GENOMES,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.054339 |
XDH | chr2 | 31573768 | 31573769 | rs45554434 | - | G | C/T | single | intron | 11 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.945286 |
XDH | chr2 | 31573809 | 31573812 | rs45491299 | - | ACT | -/AGT | deletion | intron | 11 | 1000GENOMES,BCMHGSC_JDW,BILGI_BIOE,DEVINE_LAB,EGP_SNPS,GMI,HGSV,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 0.705659 |
XDH | chr2 | 31573852 | 31573853 | rs45612243 | - | A | C/T | single | intron | 3 | 1000GENOMES,BUSHMAN,EGP_SNPS, | 2 | 0.016484 |
XDH | chr2 | 31574188 | 31574189 | rs45488396 | - | T | A/G | single | intron | 4 | 1000GENOMES,EGP_SNPS,ILLUMINA-UK,TISHKOFF, | 2 | 0.988166 |
XDH | chr2 | 31574190 | 31574191 | rs7571290 | + | C | C/T | single | intron | 14 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.945593 |
XDH | chr2 | 31574213 | 31574214 | rs11124258 | + | C | C/T | single | intron | 15 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF, | 2 | 0.360994 |
XDH | chr2 | 31574333 | 31574334 | rs7571426 | + | C | C/G | single | intron | 19 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.205537 |
XDH | chr2 | 31574453 | 31574454 | rs7571721 | + | G | A/G | single | intron | 5 | 1000GENOMES,EGP_SNPS,ILLUMINA,SSMP,WI_SSAHASNP, | 2 | 0.024112 |
XDH | chr2 | 31574888 | 31574889 | rs61578078 | + | A | A/G | single | intron | 5 | 1000GENOMES,HGSV,ILLUMINA,ILLUMINA-UK,TISHKOFF, | 2 | 0.971560 |
XDH | chr2 | 31574909 | 31574910 | rs114323079 | + | T | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.011760 |
XDH | chr2 | 31574930 | 31574931 | rs35408744 | + | G | A/G | single | intron | 8 | 1000GENOMES,ABI,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.026123 |
XDH | chr2 | 31574980 | 31574981 | rs66801306 | + | T | C/T | single | intron | 9 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.056293 |
XDH | chr2 | 31575314 | 31575315 | rs11124259 | + | A | A/C | single | intron | 15 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,PJP,SSMP,TISHKOFF, | 2 | 0.359945 |
XDH | chr2 | 31575665 | 31575666 | rs56385520 | + | C | C/T | single | intron | 7 | 1000GENOMES,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.813761 |
XDH | chr2 | 31575670 | 31575671 | rs12618694 | + | C | C/T | single | intron | 13 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,PERLEGEN,SSMP, | 2 | 0.617876 |
XDH | chr2 | 31575920 | 31575921 | rs2195502 | + | T | C/T | single | intron | 14 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,PERLEGEN,SSMP,TISHKOFF,TSC-CSHL, | 3 | 0.639235 |
XDH | chr2 | 31576073 | 31576074 | rs1896846 | + | C | C/G | single | intron | 19 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.195695 |
XDH | chr2 | 31576187 | 31576188 | rs66479838 | + | G | A/G | single | intron | 8 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,SSMP,TISHKOFF, | 2 | 0.053065 |
XDH | chr2 | 31576497 | 31576498 | rs2284831 | + | T | C/T | single | intron | 15 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA-UK,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP,YUSUKE, | 2 | 0.704888 |
XDH | chr2 | 31576633 | 31576634 | rs13414618 | + | C | C/T | single | intron | 14 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,KRIBB_YJKIM,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.367262 |
XDH | chr2 | 31576720 | 31576721 | rs73922348 | + | T | C/T | single | intron | 4 | 1000GENOMES,ILLUMINA,ILLUMINA-UK,TISHKOFF, | 2 | 0.025229 |
XDH | chr2 | 31576911 | 31576912 | rs115903524 | + | G | C/G | single | intron | 2 | 1000GENOMES,GMI, | 2 | 0.016536 |
XDH | chr2 | 31577234 | 31577235 | rs145214967 | + | T | C/T | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.017447 |
XDH | chr2 | 31577247 | 31577248 | rs75526523 | + | C | A/C | single | intron | 2 | 1000GENOMES,BUSHMAN, | 2 | 0.014220 |
XDH | chr2 | 31577437 | 31577438 | rs1072012 | + | C | C/G | single | intron | 22 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KRIBB_YJKIM,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.214450 |
XDH | chr2 | 31577549 | 31577550 | rs73922349 | + | T | C/T | single | intron | 3 | 1000GENOMES,ILLUMINA-UK,TISHKOFF, | 2 | 0.029358 |
XDH | chr2 | 31577872 | 31577873 | rs56166245 | + | A | A/G | single | intron | 3 | 1000GENOMES,HGSV,ILLUMINA, | 2 | 0.978242 |
XDH | chr2 | 31577879 | 31577880 | rs10174527 | + | A | A/C | single | intron | 17 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,ILLUMINA,ILLUMINA-UK,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.267032 |
XDH | chr2 | 31578248 | 31578249 | rs13384006 | + | T | C/T | single | intron | 14 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.730594 |
XDH | chr2 | 31578522 | 31578523 | rs1594158 | + | T | C/T | single | intron | 12 | 1000GENOMES,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA-UK,PERLEGEN,SSMP,TSC-CSHL, | 2 | 0.736706 |
XDH | chr2 | 31578668 | 31578669 | rs1594159 | + | G | C/G | single | intron | 11 | 1000GENOMES,ABI,BUSHMAN,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SC_JCM,SSAHASNP,SSMP,TSC-CSHL, | 2 | 0.054029 |
XDH | chr2 | 31578849 | 31578850 | rs73922350 | + | G | A/G | single | intron | 3 | 1000GENOMES,ILLUMINA-UK,TISHKOFF, | 2 | 0.024312 |
XDH | chr2 | 31578934 | 31578935 | rs75994329 | + | A | A/C | single | intron | 2 | 1000GENOMES,BUSHMAN, | 2 | 0.983945 |
XDH | chr2 | 31578968 | 31578969 | rs1594160 | + | A | A/C | single | intron | 21 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KRIBB_YJKIM,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.224401 |
XDH | chr2 | 31579333 | 31579334 | rs12712315 | + | G | C/G | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.779197 |
XDH | chr2 | 31579352 | 31579353 | rs73922351 | + | A | A/G | single | intron | 4 | 1000GENOMES,ILLUMINA,ILLUMINA-UK,TISHKOFF, | 2 | 0.975229 |
XDH | chr2 | 31579668 | 31579669 | rs62142912 | + | G | A/G | single | intron | 4 | 1000GENOMES,BCMHGSC_JDW,ENSEMBL,SSMP, | 2 | 0.018807 |
XDH | chr2 | 31579841 | 31579842 | rs73922352 | + | A | A/G | single | intron | 3 | 1000GENOMES,ILLUMINA-UK,TISHKOFF, | 2 | 0.976605 |
XDH | chr2 | 31580124 | 31580125 | rs113165174 | + | A | A/G | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.976147 |
XDH | chr2 | 31580249 | 31580250 | rs4951980 | + | A | A/T | single | intron | 16 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.357078 |
XDH | chr2 | 31580345 | 31580346 | rs75264945 | + | T | C/T | single | intron | 2 | 1000GENOMES,BUSHMAN, | 2 | 0.016062 |
XDH | chr2 | 31580483 | 31580484 | rs12478123 | + | C | C/T | single | intron | 16 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.263686 |
XDH | chr2 | 31580515 | 31580518 | rs71928269 | + | ATA | -/ATA | deletion | intron | 7 | 1000GENOMES,BILGI_BIOE,DEVINE_LAB,GMI,LUNTER,PJP,SSMP, | 2 | 0.441690 |
XDH | chr2 | 31580545 | 31580546 | rs12478183 | + | G | A/G | single | intron | 11 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA,PJP,SSMP, | 2 | 0.480752 |
XDH | chr2 | 31580772 | 31580773 | rs116531452 | + | C | C/G | single | intron | 1 | 1000GENOMES, | 2 | 0.987805 |
XDH | chr2 | 31580793 | 31580794 | rs10184437 | + | A | A/C | single | intron | 16 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PERLEGEN,PJP,SSMP,WUGSC_SSAHASNP, | 2 | 0.274207 |
XDH | chr2 | 31581175 | 31581176 | rs7597682 | + | G | A/G | single | intron | 3 | 1000GENOMES,TISHKOFF,WI_SSAHASNP, | 2 | 0.011760 |
XDH | chr2 | 31581202 | 31581203 | rs114248970 | + | T | C/T | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.016536 |
XDH | chr2 | 31581438 | 31581439 | rs7597755 | + | C | C/T | single | intron | 12 | 1000GENOMES,BCM-HGSC-SUB,BGI,BUSHMAN,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.864955 |
XDH | chr2 | 31581705 | 31581706 | rs1579464 | + | T | C/T | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.393967 |
XDH | chr2 | 31582284 | 31582285 | rs72864237 | + | C | C/T | single | intron | 5 | 1000GENOMES,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF, | 2 | 0.811468 |
XDH | chr2 | 31582311 | 31582312 | rs77097273 | + | C | C/T | single | intron | 5 | 1000GENOMES,BUSHMAN,GMI,SSMP,TISHKOFF, | 2 | 0.957798 |
XDH | chr2 | 31582441 | 31582442 | rs151220534 | + | C | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.985767 |
XDH | chr2 | 31582646 | 31582647 | rs111687415 | + | G | A/G | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.015124 |
XDH | chr2 | 31583011 | 31583012 | rs112495433 | + | G | A/G | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.015596 |
XDH | chr2 | 31583256 | 31583257 | rs10170372 | + | C | C/T | single | intron | 12 | 1000GENOMES,ABI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.628781 |
XDH | chr2 | 31583374 | 31583378 | rs146614493 | + | AAAT | -/AAAT | deletion | intron | 2 | 1000GENOMES,LUNTER, | 2 | 0.014692 |
XDH | chr2 | 31583417 | 31583418 | rs58549655 | + | T | C/T | single | intron | 10 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,PJP,SSMP,TISHKOFF, | 2 | 0.267490 |
XDH | chr2 | 31583443 | 31583444 | rs55676250 | + | G | A/G | single | intron | 6 | 1000GENOMES,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,SSMP, | 2 | 0.054587 |
XDH | chr2 | 31583455 | 31583456 | rs57418374 | + | T | A/T | single | intron | 11 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSMP,TISHKOFF, | 2 | 0.392873 |
XDH | chr2 | 31583730 | 31583731 | rs145667959 | + | A | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.985308 |
XDH | chr2 | 31583747 | 31583748 | rs1835170 | + | T | G/T | single | intron | 10 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA-UK,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.282450 |
XDH | chr2 | 31583912 | 31583913 | rs138226138 | + | T | C/T | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.017906 |
XDH | chr2 | 31583963 | 31583964 | rs1835171 | + | A | A/G | single | intron | 15 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.608040 |
XDH | chr2 | 31584034 | 31584035 | rs992137 | + | C | C/T | single | intron | 9 | 1000GENOMES,ABI,BUSHMAN,GMI,ILLUMINA,KRIBB_YJKIM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.963519 |
XDH | chr2 | 31584052 | 31584053 | rs73922354 | + | G | A/G | single | intron | 3 | 1000GENOMES,ILLUMINA-UK,TISHKOFF, | 2 | 0.027982 |
XDH | chr2 | 31584320 | 31584321 | rs992138 | + | G | A/G | single | intron | 10 | 1000GENOMES,ABI,BUSHMAN,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.034693 |
XDH | chr2 | 31584529 | 31584530 | rs3820922 | - | T | A/G | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PERLEGEN,PJP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.603423 |
XDH | chr2 | 31584685 | 31584686 | rs113394172 | + | A | A/C | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.984411 |
XDH | chr2 | 31584838 | 31584839 | rs6543628 | + | G | A/G | single | intron | 19 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SSMP,WI_SSAHASNP, | 2 | 0.777271 |
XDH | chr2 | 31584873 | 31584874 | rs34525014 | + | A | A/T | single | intron | 8 | 1000GENOMES,ABI,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.960587 |
XDH | chr2 | 31585074 | 31585075 | rs10190201 | + | G | A/G | single | intron | 12 | 1000GENOMES,BCM-HGSC-SUB,BGI,BL,COMPLETE_GENOMICS,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.360142 |
XDH | chr2 | 31585214 | 31585215 | rs17038412 | + | T | A/T | single | intron | 13 | 1000GENOMES,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SNP500CANCER,SSMP,TISHKOFF, | 2 | 0.283384 |
XDH | chr2 | 31585434 | 31585435 | rs7574484 | + | C | C/T | single | intron | 6 | 1000GENOMES,BUSHMAN,ILLUMINA,KRIBB_YJKIM,TISHKOFF,WI_SSAHASNP, | 2 | 0.984695 |
XDH | chr2 | 31585648 | 31585649 | rs7574920 | + | G | C/G | single | intron | 17 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA-UK,PERLEGEN,PJP,SNP500CANCER,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.384211 |
XDH | chr2 | 31585970 | 31585971 | rs45501295 | - | A | C/T | single | intron | 8 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,GMI,HGSV,SSMP,TISHKOFF, | 2 | 0.201354 |
XDH | chr2 | 31586082 | 31586083 | rs143425896 | + | C | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.989899 |
XDH | chr2 | 31586101 | 31586102 | rs13426715 | + | T | C/T | single | intron | 5 | 1000GENOMES,EGP_SNPS,HGSV,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.038136 |
XDH | chr2 | 31586153 | 31586154 | rs149713373 | + | C | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.989440 |
XDH | chr2 | 31586285 | 31586286 | rs76772830 | + | C | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.987805 |
XDH | chr2 | 31586361 | 31586362 | rs45582633 | - | C | C/G | single | intron | 3 | 1000GENOMES,EGP_SNPS,TISHKOFF, | 2 | 0.016061 |
XDH | chr2 | 31586375 | 31586376 | rs148459197 | + | G | A/G | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.011938 |
XDH | chr2 | 31586414 | 31586415 | rs45437499 | - | A | G/T | single | intron | 6 | 1000GENOMES,EGP_SNPS,HGSV,ILLUMINA,ILLUMINA-UK,TISHKOFF, | 2 | 0.039763 |
XDH | chr2 | 31586578 | 31586579 | rs45539133 | - | G | C/G | single | intron | 6 | 1000GENOMES,BUSHMAN,EGP_SNPS,HGSV,ILLUMINA-UK,TISHKOFF, | 2 | 0.961424 |
XDH | chr2 | 31586607 | 31586608 | rs45495991 | - | A | G/T | single | intron | 4 | 1000GENOMES,EGP_SNPS,ILLUMINA-UK,TISHKOFF, | 2 | 0.029139 |
XDH | chr2 | 31586860 | 31586861 | rs45506497 | - | G | C/T | single | intron | 4 | 1000GENOMES,BUSHMAN,EGP_SNPS,TISHKOFF, | 2 | 0.984401 |
XDH | chr2 | 31587141 | 31587142 | rs6760292 | + | A | A/C/G | single | intron | 12 | 1000GENOMES,BCM_SSAHASNP,BUSHMAN,EGP_SNPS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,NHLBI-ESP,SSMP,TISHKOFF, | 3 | 0.922033 |
XDH | chr2 | 31587234 | 31587235 | rs1018505 | + | G | A/G | single | intron | 23 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,PERLEGEN,PJP,SI_EXO,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.790933 |
XDH | chr2 | 31587448 | 31587449 | rs45554736 | - | G | C/T | single | intron | 3 | 1000GENOMES,BUSHMAN,EGP_SNPS, | 2 | 0.989856 |
XDH | chr2 | 31587510 | 31587511 | rs994727 | + | C | A/C | single | intron | 19 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.758773 |
XDH | chr2 | 31588219 | 31588220 | rs45467192 | - | T | A/G | single | intron | 5 | 1000GENOMES,EGP_SNPS,HGSV,ILLUMINA-UK,TISHKOFF, | 2 | 0.970042 |
XDH | chr2 | 31588287 | 31588288 | rs2365842 | + | T | A/T | single | intron | 25 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,PJP,SI_EXO,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 2 | 0.713115 |
XDH | chr2 | 31588436 | 31588437 | rs17011353 | + | C | C/T | single | intron | 10 | 1000GENOMES,AFFY,BGI,EGP_SNPS,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.933615 |
XDH | chr2 | 31588560 | 31588561 | rs1429376 | + | A | A/C | single | intron | 26 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SC_JCM,SNP500CANCER,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.213776 |
XDH | chr2 | 31588576 | 31588577 | rs17011356 | + | A | A/G | single | intron | 13 | 1000GENOMES,AFFY,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.715185 |
XDH | chr2 | 31588663 | 31588664 | rs12621192 | + | C | C/T | single | intron | 21 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SNP500CANCER,SSMP,TISHKOFF, | 2 | 0.728893 |
XDH | chr2 | 31589200 | 31589201 | rs45472693 | - | T | A/G | single | intron | 8 | 1000GENOMES,EGP_SNPS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.968697 |
XDH | chr2 | 31589413 | 31589414 | rs743163 | + | T | C/T | single | intron | 10 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,GMI,ILLUMINA,KRIBB_YJKIM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.287354 |
XDH | chr2 | 31589653 | 31589654 | rs13387204 | + | T | C/T | single | intron | 14 | 1000GENOMES,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,EGP_SNPS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.324298 |
XDH | chr2 | 31589846 | 31589847 | rs2295475 | + | G | A/G | single | coding-synon | 25 | 1000GENOMES,AFFY,APPLERA_GI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,PHARMGKB_AB_DME,PJP,SEATTLESEQ,SI_EXO,SNP500CANCER,SSMP,YUSUKE, | 2 | 0.234547 |
XDH | chr2 | 31590097 | 31590098 | rs17011359 | + | A | A/G | single | intron | 9 | 1000GENOMES,BCM-HGSC-SUB,BGI,EGP_SNPS,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.928288 |
XDH | chr2 | 31590155 | 31590156 | rs732436 | + | A | A/G | single | intron | 22 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,TSC-CSHL,YUSUKE, | 2 | 0.268066 |
XDH | chr2 | 31590205 | 31590206 | rs45565237 | - | G | C/T | single | intron | 4 | 1000GENOMES,EGP_SNPS,GMI,SSMP, | 2 | 0.982642 |
XDH | chr2 | 31590328 | 31590329 | rs732437 | + | G | A/G | single | intron | 7 | 1000GENOMES,AFFY,EGP_SNPS,ILLUMINA,KRIBB_YJKIM,TISHKOFF,TSC-CSHL, | 2 | 0.025354 |
XDH | chr2 | 31590377 | 31590378 | rs45517637 | - | G | C/T | single | intron | 5 | 1000GENOMES,BCMHGSC_JDW,EGP_SNPS,ENSEMBL,SSMP, | 2 | 0.978003 |
XDH | chr2 | 31590489 | 31590490 | rs45440994 | - | G | C/G | single | intron | 5 | 1000GENOMES,EGP_SNPS,GMI,HGSV,SSMP, | 2 | 0.979695 |
XDH | chr2 | 31590544 | 31590545 | rs2281548 | + | A | A/G | single | intron | 14 | 1000GENOMES,AFFY,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF,YUSUKE, | 2 | 0.695971 |
XDH | chr2 | 31590615 | 31590616 | rs45462299 | - | G | C/T | single | intron | 5 | 1000GENOMES,EGP_SNPS,HGSV,ILLUMINA-UK,TISHKOFF, | 2 | 0.969992 |
XDH | chr2 | 31590625 | 31590626 | rs2281549 | + | G | C/G | single | intron | 12 | 1000GENOMES,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,GMI,HGSV,ILLUMINA-UK,PERLEGEN,SSMP,TISHKOFF,YUSUKE, | 2 | 0.342114 |
XDH | chr2 | 31590696 | 31590697 | rs17011365 | + | G | A/G | single | intron | 7 | 1000GENOMES,AFFY,EGP_SNPS,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SNP500CANCER, | 2 | 0.029053 |
XDH | chr2 | 31590758 | 31590759 | rs2281550 | + | C | C/T | single | intron | 15 | 1000GENOMES,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SI_EXO,SNP500CANCER,SSMP,TISHKOFF,YUSUKE, | 3 | 0.713768 |
XDH | chr2 | 31590784 | 31590785 | rs761926 | + | C | C/G | single | intron | 24 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,PJP,SC_JCM,SI_EXO,SNP500CANCER,SSMP,TSC-CSHL,WI_SSAHASNP,YUSUKE, | 2 | 0.738686 |
XDH | chr2 | 31590916 | 31590917 | rs17011368 | + | T | C/T | single | missense | 18 | 1000GENOMES,AFFY,APPLERA_GI,CLINSEQ_SNP,EGP_SNPS,EXOME_CHIP,GMI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,PHARMGKB_AB_DME,SEATTLESEQ,SI_EXO,SNP500CANCER,SSMP,TISHKOFF, | 2 | 0.058112 |
XDH | chr2 | 31591384 | 31591388 | rs45446491 | - | CAGG | -/CCTG | deletion | intron | 3 | 1000GENOMES,EGP_SNPS,GMI, | 2 | 0.017050 |
XDH | chr2 | 31591760 | 31591761 | rs17395161 | + | T | C/T | single | intron | 6 | 1000GENOMES,EGP_SNPS,GMI,ILLUMINA,PERLEGEN,SSMP, | 2 | 0.016038 |
XDH | chr2 | 31592199 | 31592200 | rs45538232 | - | A | C/T | single | intron | 5 | 1000GENOMES,BUSHMAN,EGP_SNPS,ILLUMINA,TISHKOFF, | 2 | 0.010178 |
XDH | chr2 | 31592322 | 31592323 | rs2043013 | + | A | A/C | single | intron | 22 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.469124 |
XDH | chr2 | 31592402 | 31592403 | rs1366817 | + | A | A/G | single | intron | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.551130 |
XDH | chr2 | 31592411 | 31592412 | rs45550931 | - | A | C/T | single | intron | 4 | 1000GENOMES,EGP_SNPS,ILLUMINA-UK,TISHKOFF, | 2 | 0.026338 |
XDH | chr2 | 31592894 | 31592895 | rs2070293 | + | C | C/T | single | intron | 19 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HGBASE,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.500419 |
XDH | chr2 | 31592954 | 31592955 | rs45445692 | - | T | A/G | single | intron | 10 | 1000GENOMES,BCM-HGSC-SUB,BGI,BUSHMAN,EGP_SNPS,GMI,ILLUMINA,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.874155 |
XDH | chr2 | 31592975 | 31592976 | rs45620735 | - | C | A/G | single | intron | 4 | 1000GENOMES,BUSHMAN,EGP_SNPS,TISHKOFF, | 2 | 0.026560 |
XDH | chr2 | 31593081 | 31593082 | rs45505593 | - | T | A/G | single | intron | 4 | 1000GENOMES,BUSHMAN,EGP_SNPS,TISHKOFF, | 2 | 0.973019 |
XDH | chr2 | 31593124 | 31593125 | rs10181969 | + | T | C/T | single | intron | 10 | 1000GENOMES,BCM-HGSC-SUB,BGI,EGP_SNPS,HGSV,ILLUMINA-UK,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.102110 |
XDH | chr2 | 31593264 | 31593265 | rs17323225 | + | T | C/T | single | missense | 13 | 1000GENOMES,AFFY,APPLERA_GI,CLINSEQ_SNP,EGP_SNPS,EXOME_CHIP,GMI,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,PHARMGKB_AB_DME,SSMP, | 2 | 0.022365 |
XDH | chr2 | 31593432 | 31593433 | rs45594331 | - | T | A/G | single | intron | 4 | 1000GENOMES,BUSHMAN,EGP_SNPS,TISHKOFF, | 2 | 0.989020 |
XDH | chr2 | 31593451 | 31593452 | rs45522739 | - | A | G/T | single | intron | 4 | 1000GENOMES,BUSHMAN,EGP_SNPS,TISHKOFF, | 2 | 0.010980 |
XDH | chr2 | 31593503 | 31593504 | rs45473792 | - | A | C/T | single | intron | 5 | 1000GENOMES,BUSHMAN,EGP_SNPS,ILLUMINA,TISHKOFF, | 2 | 0.026627 |
XDH | chr2 | 31594012 | 31594013 | rs72790632 | + | G | A/G | single | intron | 4 | 1000GENOMES,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.019284 |
XDH | chr2 | 31594074 | 31594074 | rs150588223 | + | - | -/G | insertion | intron | 5 | 1000GENOMES,BILGI_BIOE,LUNTER,SSMP,TISHKOFF, | 2 | 0.938476 |
XDH | chr2 | 31594172 | 31594173 | rs2018410 | + | T | C/T | single | intron | 9 | 1000GENOMES,BL,COMPLETE_GENOMICS,GMI,HGSV,SSMP,TISHKOFF,TSC-CSHL,YUSUKE, | 2 | 0.281852 |
XDH | chr2 | 31594523 | 31594524 | rs11900892 | + | G | A/G | single | intron | 14 | 1000GENOMES,ABI,AFFY,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.190892 |
XDH | chr2 | 31594788 | 31594789 | rs13398137 | + | A | A/C | single | intron | 14 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BGI,COMPLETE_GENOMICS,EGP_SNPS,GMI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.820455 |
XDH | chr2 | 31595148 | 31595149 | rs61731081 | + | C | C/T | single | missense | 2 | AFFY_DM3_1,CORNELL, | 2 | 0.985714 |
XDH | chr2 | 31595394 | 31595395 | rs45443498 | - | G | C/T | single | intron | 4 | 1000GENOMES,EGP_SNPS,GMI,SSMP, | 2 | 0.983802 |
XDH | chr2 | 31595423 | 31595424 | rs10171290 | + | T | C/T | single | intron | 18 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.350148 |
XDH | chr2 | 31595573 | 31595574 | rs45532634 | - | A | C/T | single | intron | 8 | 1000GENOMES,BCM-HGSC-SUB,BGI,EGP_SNPS,HGSV,PJP,SSMP,TISHKOFF, | 2 | 0.061597 |
XDH | chr2 | 31595762 | 31595763 | rs45604535 | - | C | A/G | single | intron | 3 | 1000GENOMES,EGP_SNPS,TISHKOFF, | 2 | 0.029762 |
XDH | chr2 | 31595894 | 31595895 | rs45596941 | - | T | A/G | single | intron | 11 | 1000GENOMES,BCM-HGSC-SUB,BGI,COMPLETE_GENOMICS,EGP_SNPS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.885106 |
XDH | chr2 | 31596095 | 31596096 | rs35519594 | + | C | C/T | single | intron | 12 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BUSHMAN,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.852377 |
XDH | chr2 | 31596137 | 31596138 | rs115074795 | + | G | A/G | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.017406 |
XDH | chr2 | 31596518 | 31596519 | rs4549138 | + | G | A/G | single | intron | 10 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,GMI,PERLEGEN,SC_JCM,SSMP,TISHKOFF, | 2 | 0.300159 |
XDH | chr2 | 31596730 | 31596731 | rs17395224 | + | G | A/G | single | intron | 6 | 1000GENOMES,CLINSEQ_SNP,EGP_SNPS,GMI,NHLBI-ESP,PERLEGEN, | 2 | 0.021817 |
XDH | chr2 | 31596954 | 31596955 | rs4952086 | + | G | A/G | single | intron | 15 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.472973 |
XDH | chr2 | 31596962 | 31596963 | rs4952087 | + | T | C/T | single | intron | 15 | 1000GENOMES,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.472973 |
XDH | chr2 | 31597031 | 31597032 | rs12712316 | + | C | A/C | single | intron | 14 | 1000GENOMES,ABI,BUSHMAN,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.073791 |
XDH | chr2 | 31597129 | 31597130 | rs4952088 | + | G | A/G | single | intron | 17 | 1000GENOMES,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.487324 |
XDH | chr2 | 31597164 | 31597165 | rs45466195 | - | T | A/G | single | intron | 5 | 1000GENOMES,BCM-HGSC-SUB,EGP_SNPS,SSMP,TISHKOFF, | 2 | 0.956559 |
XDH | chr2 | 31597388 | 31597389 | rs111244539 | + | A | A/G | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.985321 |
XDH | chr2 | 31597409 | 31597410 | rs11894627 | + | A | A/G | single | intron | 16 | 1000GENOMES,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PJP,SSMP,TISHKOFF, | 2 | 0.476060 |
XDH | chr2 | 31597727 | 31597727 | rs45531939 | - | - | -/G | insertion | intron | 7 | 1000GENOMES,BILGI_BIOE,DEVINE_LAB,EGP_SNPS,LUNTER,SSMP,TISHKOFF, | 2 | 0.949239 |
XDH | chr2 | 31597768 | 31597769 | rs74428360 | + | G | C/G | single | intron | 4 | 1000GENOMES,BCM-HGSC-SUB,SSMP,TISHKOFF, | 2 | 0.050911 |
XDH | chr2 | 31597775 | 31597776 | rs116107660 | + | C | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.989547 |
XDH | chr2 | 31597921 | 31597922 | rs45576138 | - | G | C/T | single | intron | 5 | 1000GENOMES,BCM-HGSC-SUB,EGP_SNPS,SSMP,TISHKOFF, | 2 | 0.949102 |
XDH | chr2 | 31597929 | 31597930 | rs28412138 | + | A | A/G | single | intron | 8 | 1000GENOMES,COMPLETE_GENOMICS,EGP_SNPS,GMI,HGSV,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.665670 |
XDH | chr2 | 31597939 | 31597940 | rs28469567 | + | A | A/G | single | intron | 17 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.221465 |
XDH | chr2 | 31597993 | 31597994 | rs207401 | + | T | C/T | single | intron | 13 | 1000GENOMES,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,GMI,HGSV,KWOK,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.496378 |
XDH | chr2 | 31598121 | 31598122 | rs78634201 | + | A | A/G | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.987369 |
XDH | chr2 | 31598338 | 31598339 | rs45612839 | - | G | C/G | single | coding-synon | 8 | 1000GENOMES,BUSHMAN,CLINSEQ_SNP,CORNELL,EGP_SNPS,ILLUMINA,NHLBI-ESP,TISHKOFF, | 2 | 0.935848 |
XDH | chr2 | 31598484 | 31598485 | rs2070294 | + | T | C/T | single | intron | 15 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,ILLUMINA,SI_EXO,SSMP,YUSUKE, | 2 | 0.303196 |
XDH | chr2 | 31598809 | 31598810 | rs45449798 | - | T | A/G | single | intron | 4 | 1000GENOMES,EGP_SNPS,GMI,SSMP, | 2 | 0.986909 |
XDH | chr2 | 31598822 | 31598823 | rs2281547 | + | T | C/T | single | intron | 16 | 1000GENOMES,ABI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.324771 |
XDH | chr2 | 31598916 | 31598917 | rs1991541 | + | T | C/T | single | intron | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,PERLEGEN,PJP,SSMP,TISHKOFF,TSC-CSHL, | 3 | 0.773723 |
XDH | chr2 | 31598929 | 31598930 | rs45473506 | - | C | A/G | single | intron | 4 | 1000GENOMES,BUSHMAN,EGP_SNPS,TISHKOFF, | 2 | 0.032068 |
XDH | chr2 | 31599105 | 31599109 | rs45444891 | - | AGAT | -/ATCT | deletion | intron | 3 | 1000GENOMES,EGP_SNPS,LUNTER, | 2 | 0.010638 |
XDH | chr2 | 31599266 | 31599267 | rs45600934 | - | T | A/G | single | intron | 3 | 1000GENOMES,BUSHMAN,EGP_SNPS, | 2 | 0.978481 |
XDH | chr2 | 31599321 | 31599324 | rs45582035 | - | AGT | -/ACT | deletion | intron | 5 | 1000GENOMES,EGP_SNPS,GMI,LUNTER,SSMP, | 2 | 0.016470 |
XDH | chr2 | 31599389 | 31599390 | rs45489195 | - | A | A/T | single | intron | 3 | 1000GENOMES,EGP_SNPS,SSMP, | 2 | 0.013091 |
XDH | chr2 | 31599565 | 31599566 | rs1366816 | + | A | A/G | single | intron | 9 | 1000GENOMES,ABI,BUSHMAN,EGP_SNPS,HGSV,ILLUMINA-UK,SC_JCM,SSMP,TSC-CSHL, | 2 | 0.905947 |
XDH | chr2 | 31599644 | 31599644 | rs45600638 | - | - | -/GTTACTATT | insertion | cds-indel | 4 | 1000GENOMES,BILGI_BIOE,EGP_SNPS,LUNTER, | 2 | 0.473118 |
XDH | chr2 | 31599698 | 31599699 | rs4952089 | + | C | C/T | single | intron | 11 | 1000GENOMES,BCM-HGSC-SUB,BL,BUSHMAN,EGP_SNPS,GMI,HGSV,ILLUMINA-UK,SI_EXO,SSMP,WI_SSAHASNP, | 2 | 0.525308 |
XDH | chr2 | 31599848 | 31599849 | rs10172747 | + | G | C/G | single | intron | 5 | 1000GENOMES,EGP_SNPS,ILLUMINA-UK,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.027280 |
XDH | chr2 | 31600016 | 31600017 | rs45471294 | - | C | A/G | single | coding-synon | 10 | 1000GENOMES,CLINSEQ_SNP,CORNELL,EGP_SNPS,EXOME_CHIP,ILLUMINA,NHLBI-ESP,PHARMGKB_AB_DME,SNP500CANCER,SSMP, | 2 | 0.014113 |
XDH | chr2 | 31600145 | 31600146 | rs10187719 | + | T | C/T | single | intron | 15 | 1000GENOMES,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,NHLBI-ESP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.768390 |
XDH | chr2 | 31600234 | 31600235 | rs113335263 | + | C | C/T | single | intron | 6 | 1000GENOMES,BCM-HGSC-SUB,BUSHMAN,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.960550 |
XDH | chr2 | 31600359 | 31600360 | rs116271969 | + | C | A/C | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.015679 |
XDH | chr2 | 31600432 | 31600433 | rs72790636 | + | G | C/G | single | intron | 2 | 1000GENOMES,COMPLETE_GENOMICS, | 2 | 0.037156 |
XDH | chr2 | 31600557 | 31600558 | rs78655018 | + | C | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.972997 |
XDH | chr2 | 31600903 | 31600904 | rs202146590 | + | A | -/A | deletion | intron | 1 | 1000GENOMES, | 2 | 0.014692 |
XDH | chr2 | 31600968 | 31600969 | rs192492071 | + | A | A/G | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.938017 |
XDH | chr2 | 31600972 | 31600973 | rs9973789 | + | A | A/G | single | intron | 4 | 1000GENOMES,GMI,SSMP,WUGSC_SSAHASNP, | 2 | 0.895776 |
XDH | chr2 | 31600980 | 31600981 | rs186620844 | + | G | A/G | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.104224 |
XDH | chr2 | 31601073 | 31601074 | rs6709675 | + | C | A/C | single | intron | 3 | 1000GENOMES,BCM_SSAHASNP,ILLUMINA-UK, | 2 | 0.026147 |
XDH | chr2 | 31601283 | 31601284 | rs114281245 | + | T | A/T | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.013490 |
XDH | chr2 | 31601541 | 31601542 | rs147249797 | + | G | -/G | deletion | intron | 6 | 1000GENOMES,BILGI_BIOE,BL,LUNTER,SSMP,TISHKOFF, | 2 | 0.141873 |
XDH | chr2 | 31601899 | 31601900 | rs13423453 | + | A | A/T | single | intron | 5 | 1000GENOMES,EGP_SNPS,ILLUMINA-UK,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.972973 |
XDH | chr2 | 31601934 | 31601935 | rs45491696 | - | C | C/G | single | intron | 5 | 1000GENOMES,BCM-HGSC-SUB,EGP_SNPS,SSMP,TISHKOFF, | 2 | 0.039307 |
XDH | chr2 | 31602146 | 31602147 | rs45520334 | - | G | C/T | single | intron | 4 | 1000GENOMES,EGP_SNPS,ILLUMINA,SSMP, | 2 | 0.989020 |
XDH | chr2 | 31602222 | 31602223 | rs45493094 | - | G | A/C | single | intron | 5 | 1000GENOMES,BCM-HGSC-SUB,EGP_SNPS,SSMP,TISHKOFF, | 2 | 0.039274 |
XDH | chr2 | 31602790 | 31602791 | rs34929837 | - | T | A/T | single | missense | 10 | 1000GENOMES,APPLERA_GI,CLINSEQ_SNP,EGP_SNPS,EXOME_CHIP,ILLUMINA,NHLBI-ESP,PERLEGEN,PHARMGKB_AB_DME,SNP500CANCER, | 2 | 0.981743 |
XDH | chr2 | 31602840 | 31602841 | rs45612738 | - | G | C/T | single | coding-synon | 9 | 1000GENOMES,CLINSEQ_SNP,CORNELL,EGP_SNPS,EXOME_CHIP,ILLUMINA,NHLBI-ESP,PHARMGKB_AB_DME,SNP500CANCER, | 2 | 0.981882 |
XDH | chr2 | 31602896 | 31602897 | rs45591938 | - | C | A/G | single | intron | 4 | 1000GENOMES,EGP_SNPS,GMI,SSMP, | 2 | 0.016061 |
XDH | chr2 | 31603063 | 31603064 | rs45488000 | - | G | C/T | single | intron | 5 | 1000GENOMES,EGP_SNPS,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.978003 |
XDH | chr2 | 31603094 | 31603095 | rs45601433 | - | A | C/T | single | intron | 5 | 1000GENOMES,EGP_SNPS,GMI,ILLUMINA,SSMP, | 2 | 0.014370 |
XDH | chr2 | 31603133 | 31603134 | rs2163059 | + | A | A/G | single | intron | 19 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,GMI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SNP500CANCER,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 2 | 0.559970 |
XDH | chr2 | 31603303 | 31603304 | rs6733391 | + | T | A/T | single | intron | 14 | 1000GENOMES,BCM-HGSC-SUB,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,GMI,ILLUMINA,ILLUMINA-UK,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.448924 |
XDH | chr2 | 31603474 | 31603475 | rs45444799 | - | G | C/T | single | intron | 4 | 1000GENOMES,BUSHMAN,EGP_SNPS,TISHKOFF, | 2 | 0.986475 |
XDH | chr2 | 31603502 | 31603503 | rs45603041 | - | C | A/G | single | intron | 4 | 1000GENOMES,EGP_SNPS,ILLUMINA,ILLUMINA-UK, | 2 | 0.022184 |
XDH | chr2 | 31603606 | 31603607 | rs6718606 | + | C | C/G | single | intron | 16 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SNP500CANCER,SSMP,TISHKOFF, | 2 | 0.862944 |
XDH | chr2 | 31604445 | 31604446 | rs45552841 | - | A | C/T | single | intron | 6 | 1000GENOMES,EGP_SNPS,HGSV,ILLUMINA-UK,NHLBI-ESP,TISHKOFF, | 2 | 0.028390 |
XDH | chr2 | 31604771 | 31604772 | rs45550432 | - | A | C/T | single | intron | 4 | 1000GENOMES,EGP_SNPS,GMI,SSMP, | 2 | 0.012257 |
XDH | chr2 | 31604843 | 31604844 | rs45454494 | - | T | A/G | single | intron | 4 | 1000GENOMES,BUSHMAN,EGP_SNPS,ILLUMINA, | 2 | 0.988176 |
XDH | chr2 | 31604867 | 31604868 | rs138620193 | + | C | C/T | single | intron | 3 | 1000GENOMES,ILLUMINA,SSMP, | 2 | 0.988522 |
XDH | chr2 | 31605189 | 31605190 | rs45457594 | - | A | C/T | single | intron | 4 | 1000GENOMES,EGP_SNPS,GMI,SSMP, | 2 | 0.017827 |
XDH | chr2 | 31605281 | 31605282 | rs116648715 | + | G | G/T | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA,SSMP, | 2 | 0.986510 |
XDH | chr2 | 31605410 | 31605411 | rs6720163 | + | T | G/T | single | intron | 16 | 1000GENOMES,BCM-HGSC-SUB,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF, | 3 | 0.480112 |
XDH | chr2 | 31605446 | 31605447 | rs3769618 | - | C | A/G | single | intron | 17 | 1000GENOMES,ABI,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SNP500CANCER,SSMP,TISHKOFF,YUSUKE, | 3 | 0.341056 |
XDH | chr2 | 31605519 | 31605520 | rs45622534 | - | C | C/G | single | intron | 3 | 1000GENOMES,EGP_SNPS,GMI, | 2 | 0.014818 |
XDH | chr2 | 31605525 | 31605526 | rs45539541 | - | G | C/G/T | single | intron | 2 | EGP_SNPS,GMI, | 2 | 0.983696 |
XDH | chr2 | 31605525 | 31605525 | rs45483497 | - | - | -/T | insertion | intron | 4 | 1000GENOMES,EGP_SNPS,GMI,LUNTER, | 2 | 0.985182 |
XDH | chr2 | 31605614 | 31605615 | rs1864280 | + | A | A/G | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.507007 |
XDH | chr2 | 31606360 | 31606361 | rs45568731 | - | G | C/T | single | intron | 3 | 1000GENOMES,EGP_SNPS,SSMP, | 2 | 0.988992 |
XDH | chr2 | 31606381 | 31606382 | rs45509900 | - | A | A/T | single | intron | 2 | 1000GENOMES,EGP_SNPS, | 2 | 0.016074 |
XDH | chr2 | 31606382 | 31606383 | rs45597733 | - | G | C/T | single | intron | 2 | 1000GENOMES,EGP_SNPS, | 2 | 0.983926 |
XDH | chr2 | 31606383 | 31606384 | rs45464398 | - | C | A/G | single | intron | 2 | 1000GENOMES,EGP_SNPS, | 2 | 0.016074 |
XDH | chr2 | 31606424 | 31606425 | rs45462793 | - | C | A/G | single | intron | 4 | 1000GENOMES,EGP_SNPS,ILLUMINA-UK,TISHKOFF, | 2 | 0.021978 |
XDH | chr2 | 31606669 | 31606670 | rs4407290 | + | G | A/G | single | coding-synon | 16 | 1000GENOMES,AFFY,BCM-HGSC-SUB,CLINSEQ_SNP,DEVINE_LAB,EGP_SNPS,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,PHARMGKB_AB_DME,SC_JCM,SEATTLESEQ,SNP500CANCER,SSMP,TISHKOFF, | 2 | 0.034553 |
XDH | chr2 | 31606905 | 31606906 | rs45470100 | - | T | A/C/G | single | intron | 4 | 1000GENOMES,EGP_SNPS,ILLUMINA-UK,TISHKOFF, | 3 | 0.982523 |
XDH | chr2 | 31606985 | 31606986 | rs368094943 | - | G | (CA)23/24/25/26 | microsatellite | unknown | 1 | GENETHON, | 7 | 0.019000 |
XDH | chr2 | 31607064 | 31607065 | rs71444496 | + | C | C/T | single | intron | 5 | 1000GENOMES,ENSEMBL,GMI,HUMANGENOME_JCVI,SSMP, | 2 | 0.971586 |
XDH | chr2 | 31607127 | 31607128 | rs2236168 | + | T | C/T | single | intron | 21 | 1000GENOMES,ABI,AFFY,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,DEVINE_LAB,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.439741 |
XDH | chr2 | 31607544 | 31607545 | rs528551 | + | C | C/G | single | intron | 12 | 1000GENOMES,ABI,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,KWOK,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.938958 |
XDH | chr2 | 31607917 | 31607918 | rs45498201 | - | G | C/T | single | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,EGP_SNPS,ILLUMINA, | 2 | 0.988115 |
XDH | chr2 | 31607930 | 31607931 | rs45530139 | - | A | C/T | single | intron | 2 | 1000GENOMES,EGP_SNPS, | 2 | 0.011045 |
XDH | chr2 | 31607934 | 31607935 | rs45482594 | - | T | A/G | single | intron | 2 | 1000GENOMES,EGP_SNPS, | 2 | 0.985556 |
XDH | chr2 | 31608065 | 31608065 | rs45548143 | - | - | -/T | insertion | intron | 3 | 1000GENOMES,EGP_SNPS,LUNTER, | 2 | 0.976655 |
XDH | chr2 | 31608434 | 31608435 | rs17011403 | + | C | C/T | single | intron | 5 | 1000GENOMES,EGP_SNPS,ILLUMINA,KRIBB_YJKIM,PERLEGEN, | 2 | 0.980530 |
XDH | chr2 | 31608664 | 31608665 | rs45585433 | - | C | A/G | single | intron | 4 | 1000GENOMES,BUSHMAN,EGP_SNPS,TISHKOFF, | 2 | 0.027848 |
XDH | chr2 | 31608854 | 31608855 | rs561525 | + | T | C/T | single | intron | 14 | 1000GENOMES,EGP_SNPS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.055269 |
XDH | chr2 | 31608942 | 31608943 | rs59740440 | + | T | C/T | single | intron | 2 | 1000GENOMES,HGSV, | 2 | 0.010017 |
XDH | chr2 | 31609044 | 31609045 | rs473935 | + | T | A/T | single | intron | 12 | 1000GENOMES,EGP_SNPS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SSMP,TISHKOFF, | 2 | 0.055805 |
XDH | chr2 | 31609447 | 31609448 | rs477626 | + | A | A/C | single | intron | 25 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,NHLBI-ESP,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.000000 |
XDH | chr2 | 31609748 | 31609749 | rs45527541 | - | C | G/T | single | intron | 2 | 1000GENOMES,EGP_SNPS, | 2 | 0.984991 |
XDH | chr2 | 31609836 | 31609837 | rs187096717 | + | G | G/T | single | intron | 1 | 1000GENOMES, | 2 | 0.982094 |
XDH | chr2 | 31609941 | 31609942 | rs77775907 | + | G | A/G | single | intron | 2 | 1000GENOMES,COMPLETE_GENOMICS, | 2 | 0.017431 |
XDH | chr2 | 31609960 | 31609961 | rs4952239 | + | A | A/T | single | intron | 15 | 1000GENOMES,AFFY,BCMHGSC_JDW,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,KRIBB_YJKIM,PJP,SSMP,WI_SSAHASNP, | 2 | 0.364946 |
XDH | chr2 | 31609992 | 31609993 | rs185925 | - | G | C/T | single | intron | 19 | 1000GENOMES,AFFY,BCMHGSC_JDW,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SSMP,WI_SSAHASNP, | 2 | 0.370040 |
XDH | chr2 | 31610290 | 31610291 | rs113923480 | + | G | G/T | single | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA, | 2 | 0.983486 |
XDH | chr2 | 31610310 | 31610311 | rs206846 | - | C | C/G | single | intron | 23 | 1000GENOMES,AFFY,BCMHGSC_JDW,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP,YUSUKE, | 2 | 0.611590 |
XDH | chr2 | 31610700 | 31610701 | rs45575032 | - | C | A/G | single | coding-synon | 9 | 1000GENOMES,BUSHMAN,CLINSEQ_SNP,EGP_SNPS,ILLUMINA,NHLBI-ESP,SEATTLESEQ,SSMP,TISHKOFF, | 2 | 0.028115 |
XDH | chr2 | 31611028 | 31611029 | rs2073316 | + | G | A/G | single | intron | 18 | 1000GENOMES,ABI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGBASE,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,NHLBI-ESP,PJP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.374655 |
XDH | chr2 | 31611142 | 31611143 | rs45523133 | - | C | A/G | single | missense | 10 | 1000GENOMES,BUSHMAN,CLINSEQ_SNP,EGP_SNPS,EXOME_CHIP,ILLUMINA,NHLBI-ESP,SEATTLESEQ,SSMP,TISHKOFF, | 2 | 0.028118 |
XDH | chr2 | 31611212 | 31611213 | rs45501994 | - | G | C/T | single | intron | 6 | 1000GENOMES,BUSHMAN,EGP_SNPS,ILLUMINA,NHLBI-ESP,TISHKOFF, | 2 | 0.969582 |
XDH | chr2 | 31611366 | 31611367 | rs206847 | + | T | C/T | single | intron | 28 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGBASE,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SNP500CANCER,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP,YUSUKE, | 5 | 0.008249 |
XDH | chr2 | 31611739 | 31611740 | rs45591032 | - | C | A/G | single | intron | 5 | 1000GENOMES,BUSHMAN,EGP_SNPS,ILLUMINA,TISHKOFF, | 2 | 0.030431 |
XDH | chr2 | 31612068 | 31612069 | rs75529829 | + | C | C/T | single | intron | 2 | 1000GENOMES,BUSHMAN, | 2 | 0.986232 |
XDH | chr2 | 31612718 | 31612719 | rs206848 | - | A | C/T | single | intron | 12 | 1000GENOMES,ABI,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,ILLUMINA-UK,KWOK,PJP,SC_JCM, | 2 | 0.512797 |
XDH | chr2 | 31612780 | 31612781 | rs13418515 | + | C | C/T | single | intron | 11 | 1000GENOMES,AFFY,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SNP500CANCER,SSMP,WUGSC_SSAHASNP, | 2 | 0.888066 |
XDH | chr2 | 31613248 | 31613249 | rs206849 | - | A | C/T | single | intron | 22 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SNP500CANCER,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.622574 |
XDH | chr2 | 31613355 | 31613356 | rs45551735 | - | T | A/G | single | intron | 4 | 1000GENOMES,EGP_SNPS,GMI,SSMP, | 2 | 0.963652 |
XDH | chr2 | 31613944 | 31613945 | rs206850 | + | A | A/G | single | intron | 8 | 1000GENOMES,EGP_SNPS,GMI,ILLUMINA-UK,KWOK,SC_JCM,SSMP,TISHKOFF, | 2 | 0.947615 |
XDH | chr2 | 31614081 | 31614082 | rs206851 | + | A | A/G | single | intron | 19 | 1000GENOMES,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.280992 |
XDH | chr2 | 31614111 | 31614112 | rs45564434 | - | C | A/G | single | intron | 4 | 1000GENOMES,BUSHMAN,EGP_SNPS,TISHKOFF, | 2 | 0.025085 |
XDH | chr2 | 31614224 | 31614225 | rs13431382 | + | A | A/G | single | intron | 11 | 1000GENOMES,BCMHGSC_JDW,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,ILLUMINA,KRIBB_YJKIM,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.922380 |
XDH | chr2 | 31614899 | 31614900 | rs11904439 | + | A | A/G | single | intron | 9 | 1000GENOMES,ABI,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,KRIBB_YJKIM,SNP500CANCER,SSMP, | 2 | 0.972577 |
XDH | chr2 | 31615060 | 31615061 | rs202146117 | + | C | -/C/T | in-del | intron | 2 | 1000GENOMES,ABI, | 2 | 0.031221 |
XDH | chr2 | 31615175 | 31615176 | rs11895133 | + | C | C/G | single | intron | 8 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,CSHL-HAPMAP,ENSEMBL,GMI,PJP, | 2 | 0.807604 |
XDH | chr2 | 31616199 | 31616200 | rs113227183 | + | G | C/G | single | intron | 3 | 1000GENOMES,BCM-HGSC-SUB,SSMP, | 2 | 0.030461 |
XDH | chr2 | 31616311 | 31616312 | rs75840614 | + | C | C/T | single | intron | 4 | 1000GENOMES,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.932965 |
XDH | chr2 | 31616465 | 31616466 | rs7578359 | + | G | C/G | single | intron | 3 | 1000GENOMES,BUSHMAN,WI_SSAHASNP, | 2 | 0.014615 |
XDH | chr2 | 31616748 | 31616749 | rs206854 | - | A | C/T | single | intron | 21 | 1000GENOMES,ABI,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SC_SNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.648498 |
XDH | chr2 | 31616797 | 31616798 | rs112326377 | + | T | C/T | single | intron | 4 | 1000GENOMES,BUSHMAN,SSMP,TISHKOFF, | 2 | 0.043598 |
XDH | chr2 | 31617142 | 31617143 | rs206855 | - | A | A/T | single | intron | 19 | 1000GENOMES,ABI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SNP500CANCER,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.462077 |
XDH | chr2 | 31617267 | 31617268 | rs78656026 | + | T | G/T | single | intron | 1 | 1000GENOMES, | 2 | 0.020035 |
XDH | chr2 | 31617419 | 31617420 | rs206856 | - | T | A/T | single | intron | 13 | 1000GENOMES,ABI,AFFY,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,KRIBB_YJKIM,KWOK,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.931323 |
XDH | chr2 | 31617771 | 31617772 | rs72790646 | + | C | C/T | single | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.982110 |
XDH | chr2 | 31618001 | 31618002 | rs7582523 | + | C | C/G | single | intron | 7 | 1000GENOMES,AFFY,BUSHMAN,KRIBB_YJKIM,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.930016 |
XDH | chr2 | 31618026 | 31618027 | rs116215782 | + | T | C/T | single | intron | 3 | 1000GENOMES,BL,ILLUMINA, | 2 | 0.018277 |
XDH | chr2 | 31618143 | 31618144 | rs10199855 | + | C | C/T | single | intron | 8 | 1000GENOMES,COMPLETE_GENOMICS,GMI,ILLUMINA,SC_SNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.913144 |
XDH | chr2 | 31618522 | 31618523 | rs78456981 | + | T | C/T | single | intron | 4 | 1000GENOMES,BUSHMAN,SSMP,TISHKOFF, | 2 | 0.067859 |
XDH | chr2 | 31618889 | 31618890 | rs72790647 | + | G | A/G | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.011749 |
XDH | chr2 | 31618964 | 31618965 | rs76137637 | + | C | C/T | single | intron | 2 | 1000GENOMES,BUSHMAN, | 2 | 0.986239 |
XDH | chr2 | 31619100 | 31619101 | rs206857 | - | G | C/T | single | intron | 21 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 2 | 0.833680 |
XDH | chr2 | 31619266 | 31619267 | rs206858 | - | G | C/G | single | intron | 21 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SNP500CANCER,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.421862 |
XDH | chr2 | 31619429 | 31619430 | rs11885410 | + | T | C/T | single | intron | 7 | 1000GENOMES,ABI,CSHL-HAPMAP,ENSEMBL,ILLUMINA,KRIBB_YJKIM,TISHKOFF, | 2 | 0.032622 |
XDH | chr2 | 31619462 | 31619463 | rs75715410 | + | G | A/G | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.012620 |
XDH | chr2 | 31619558 | 31619559 | rs206859 | - | A | C/T | single | intron | 20 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.561032 |
XDH | chr2 | 31620096 | 31620097 | rs117082837 | + | C | A/C | single | intron | 3 | 1000GENOMES,SSMP,TISHKOFF, | 2 | 0.041340 |
XDH | chr2 | 31620297 | 31620298 | rs112666152 | + | C | C/T | single | intron | 3 | 1000GENOMES,BUSHMAN,ILLUMINA, | 2 | 0.985780 |
XDH | chr2 | 31621597 | 31621598 | rs10175754 | + | T | C/T | single | intron | 14 | 1000GENOMES,BCMHGSC_JDW,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.121671 |
XDH | chr2 | 31622424 | 31622425 | rs45476593 | - | T | A/G | single | intron | 5 | 1000GENOMES,COMPLETE_GENOMICS,EGP_SNPS,ILLUMINA,TISHKOFF, | 2 | 0.971674 |
XDH | chr2 | 31622464 | 31622465 | rs2010704 | - | C | G/T | single | intron | 11 | 1000GENOMES,ABI,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,GMI,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.542612 |
XDH | chr2 | 31622803 | 31622804 | rs206860 | - | G | C/T | single | intron | 25 | 1000GENOMES,ABI,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SNP500CANCER,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 3 | 0.292299 |
XDH | chr2 | 31623236 | 31623237 | rs2749994 | + | T | C/T | single | intron | 17 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_JCM,SSMP,TISHKOFF,WUGSC_SSAHASNP,YUSUKE, | 2 | 0.702335 |
XDH | chr2 | 31623809 | 31623810 | rs6714794 | + | T | C/T | single | intron | 9 | 1000GENOMES,BCM_SSAHASNP,BUSHMAN,EGP_SNPS,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.075039 |
XDH | chr2 | 31624565 | 31624566 | rs112657838 | + | G | A/G | single | intron | 2 | 1000GENOMES,BUSHMAN, | 2 | 0.011927 |
XDH | chr2 | 31624835 | 31624836 | rs494852 | - | C | A/G | single | intron | 21 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SNP500CANCER,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.197805 |
XDH | chr2 | 31624986 | 31624988 | rs35575779 | + | AG | -/AG | deletion | intron | 10 | 1000GENOMES,ABI,DEVINE_LAB,EGP_SNPS,GMI,HUMANGENOME_JCVI,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 0.055415 |
XDH | chr2 | 31625609 | 31625610 | rs513311 | - | G | A/C | single | intron | 15 | 1000GENOMES,ABI,EGP_SNPS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.071771 |
XDH | chr2 | 31626044 | 31626045 | rs1346644 | - | G | C/G | single | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,SI_EXO,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.889847 |
XDH | chr2 | 31626093 | 31626094 | rs206797 | - | C | G/T | single | intron | 14 | 1000GENOMES,ABI,EGP_SNPS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,KWOK,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 2 | 0.943922 |
XDH | chr2 | 31626384 | 31626385 | rs1429372 | - | A | C/T | single | intron | 18 | 1000GENOMES,ABI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGBASE,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,SNP500CANCER,SSMP,TISHKOFF,TSC-CSHL,YUSUKE, | 2 | 0.433107 |
XDH | chr2 | 31626635 | 31626636 | rs206798 | - | C | A/G | single | intron | 19 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.210345 |
XDH | chr2 | 31626947 | 31626948 | rs11302270 | + | A | -/A | deletion | intron | 11 | 1000GENOMES,BILGI_BIOE,BUSHMAN,DEVINE_LAB,EGP_SNPS,GMI,HUMANGENOME_JCVI,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 0.151042 |
XDH | chr2 | 31627105 | 31627106 | rs206799 | - | G | C/G | single | intron | 13 | 1000GENOMES,ABI,EGP_SNPS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.940143 |
XDH | chr2 | 31627946 | 31627947 | rs206800 | - | A | C/T | single | intron | 20 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KWOK,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.210658 |
XDH | chr2 | 31628248 | 31628249 | rs11323608 | + | A | -/A | deletion | intron | 4 | 1000GENOMES,DEVINE_LAB,EGP_SNPS,LUNTER, | 2 | 0.014431 |
XDH | chr2 | 31628704 | 31628705 | rs1366814 | - | T | A/C | single | intron | 15 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.917917 |
XDH | chr2 | 31628745 | 31628746 | rs206801 | - | G | C/T | single | intron | 15 | 1000GENOMES,CLINSEQ_SNP,EGP_SNPS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KWOK,NHLBI-ESP,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 2 | 0.935686 |
XDH | chr2 | 31628954 | 31628955 | rs206802 | - | C | C/G | single | intron | 19 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.143054 |
XDH | chr2 | 31629029 | 31629030 | rs206803 | - | A | G/T | single | intron | 18 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SSMP,TISHKOFF, | 2 | 0.150255 |
XDH | chr2 | 31629511 | 31629512 | rs6759319 | + | C | C/T | single | intron | 11 | 1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,ILLUMINA,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.924210 |
XDH | chr2 | 31630381 | 31630382 | rs3769616 | - | C | A/G | single | intron | 7 | 1000GENOMES,AFFY,CSHL-HAPMAP,ILLUMINA,KRIBB_YJKIM,SSMP,YUSUKE, | 2 | 0.044337 |
XDH | chr2 | 31630845 | 31630846 | rs206804 | - | C | A/G | single | intron | 21 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SNP500CANCER,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.202232 |
XDH | chr2 | 31630866 | 31630867 | rs206805 | - | C | A/G | single | intron | 23 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SNP500CANCER,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.199901 |
XDH | chr2 | 31632702 | 31632703 | rs116760403 | + | C | A/C | single | intron | 1 | 1000GENOMES, | 2 | 0.014795 |
XDH | chr2 | 31632955 | 31632956 | rs1978639 | - | C | G/T | single | intron | 11 | 1000GENOMES,ABI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA-UK,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.541602 |
XDH | chr2 | 31633013 | 31633014 | rs1978638 | - | T | A/C | single | intron | 11 | 1000GENOMES,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA-UK,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.480488 |
XDH | chr2 | 31633437 | 31633438 | rs61706447 | + | C | C/T | single | intron | 8 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.540503 |
XDH | chr2 | 31633964 | 31633965 | rs206806 | - | T | A/G | single | intron | 16 | 1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.420237 |
XDH | chr2 | 31634011 | 31634012 | rs112810470 | + | G | A/G | single | intron | 6 | 1000GENOMES,BL,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF, | 2 | 0.270183 |
XDH | chr2 | 31634075 | 31634076 | rs206807 | - | C | G/T | single | intron | 9 | 1000GENOMES,ENSEMBL,GMI,HGSV,KWOK,PJP,SC_JCM,SSMP,TISHKOFF, | 2 | 0.939908 |
XDH | chr2 | 31634129 | 31634130 | rs206808 | - | C | C/G | single | intron | 10 | 1000GENOMES,ABI,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,KWOK,SC_JCM,SSMP,WI_SSAHASNP, | 2 | 0.504125 |
XDH | chr2 | 31634138 | 31634139 | rs206809 | - | C | A/G | single | intron | 6 | 1000GENOMES,ENSEMBL,HGSV,KWOK,SC_JCM,SSMP, | 2 | 0.050459 |
XDH | chr2 | 31634823 | 31634823 | rs45455193 | - | - | -/CACT | insertion | intron | 5 | 1000GENOMES,BILGI_BIOE,BUSHMAN,EGP_SNPS,LUNTER, | 2 | 0.521277 |
XDH | chr2 | 31634861 | 31634862 | rs45555736 | - | T | A/T | single | intron | 3 | 1000GENOMES,EGP_SNPS,GMI, | 2 | 0.962352 |
XDH | chr2 | 31635317 | 31635318 | rs200181293 | + | A | -/A | deletion | intron | 4 | 1000GENOMES,LUNTER,SSMP,TISHKOFF, | 2 | 0.063820 |
XDH | chr2 | 31636216 | 31636217 | rs206810 | - | T | A/G | single | intron | 16 | 1000GENOMES,ABI,EGP_SNPS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.934866 |
XDH | chr2 | 31636864 | 31636865 | rs45503200 | - | C | A/G | single | intron | 2 | 1000GENOMES,EGP_SNPS, | 2 | 0.014780 |
XDH | chr2 | 31636914 | 31636915 | rs206811 | - | A | C/T | single | intron | 20 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SNP500CANCER,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.600252 |
XDH | chr2 | 31637252 | 31637253 | rs45451795 | - | G | C/T | single | intron | 5 | 1000GENOMES,BCM-HGSC-SUB,EGP_SNPS,ILLUMINA,SSMP, | 2 | 0.970439 |
XDH | chr2 | 31637597 | 31637598 | rs36208390 | + | C | C/G | single | untranslated-5 | 7 | 1000GENOMES,EGP_SNPS,ILLUMINA,NHLBI-ESP,PHARMGKB_AB_DME,SNP500CANCER,STEJUSTINE-REGGEN, | 2 | 0.987727 |