Gene Symbol | Chromosome | Start | End | rs ID | Strand | NCBI ref | Observed | Class | Function | Submitter Count | Submitter | Frequency Count | Allele Frequency |
---|
SUGCT | chr7 | 40600058 | 40600059 | rs75924875 | + | A | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.988686 |
SUGCT | chr7 | 40600068 | 40600069 | rs7801001 | + | A | A/C | single | intron | 7 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA,KRIBB_YJKIM,PERLEGEN,TISHKOFF,WI_SSAHASNP, | 2 | 0.943790 |
SUGCT | chr7 | 40600695 | 40600696 | rs73689818 | + | A | A/G | single | intron | 4 | 1000GENOMES,ILLUMINA,ILLUMINA-UK,TISHKOFF, | 2 | 0.962844 |
SUGCT | chr7 | 40601248 | 40601249 | rs113484552 | + | C | C/T | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.987168 |
SUGCT | chr7 | 40601351 | 40601352 | rs113681732 | + | A | A/G | single | intron | 7 | 1000GENOMES,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF, | 2 | 0.746905 |
SUGCT | chr7 | 40601482 | 40601483 | rs147963204 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.026171 |
SUGCT | chr7 | 40601671 | 40601672 | rs113785315 | + | C | C/G | single | intron | 8 | 1000GENOMES,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF, | 2 | 0.762036 |
SUGCT | chr7 | 40601854 | 40601855 | rs112300090 | + | G | A/G | single | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.036239 |
SUGCT | chr7 | 40601997 | 40601998 | rs113266661 | + | G | A/G | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.010536 |
SUGCT | chr7 | 40602104 | 40602105 | rs17435152 | + | T | G/T | single | intron | 9 | 1000GENOMES,BCMHGSC_JDW,BGI,ENSEMBL,GMI,ILLUMINA,PERLEGEN,SSMP,TISHKOFF, | 3 | 0.068561 |
SUGCT | chr7 | 40602422 | 40602423 | rs75135876 | + | C | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.969512 |
SUGCT | chr7 | 40602836 | 40602837 | rs67340458 | + | G | G/T | single | intron | 8 | 1000GENOMES,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.753092 |
SUGCT | chr7 | 40602965 | 40602966 | rs73308281 | + | C | C/T | single | intron | 7 | 1000GENOMES,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,SSMP,TISHKOFF, | 2 | 0.913382 |
SUGCT | chr7 | 40602986 | 40602987 | rs113025969 | + | G | C/G | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.013749 |
SUGCT | chr7 | 40603119 | 40603120 | rs142099981 | + | C | -/C | deletion | intron | 3 | 1000GENOMES,LUNTER,TISHKOFF, | 2 | 0.035813 |
SUGCT | chr7 | 40603622 | 40603623 | rs116698681 | + | C | A/C | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.031794 |
SUGCT | chr7 | 40603969 | 40603970 | rs12533968 | + | C | C/T | single | intron | 15 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.556725 |
SUGCT | chr7 | 40604076 | 40604077 | rs79153294 | + | G | A/G | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.012844 |
SUGCT | chr7 | 40604124 | 40604125 | rs77868527 | + | T | G/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.014808 |
SUGCT | chr7 | 40604336 | 40604337 | rs77219489 | + | G | G/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.969077 |
SUGCT | chr7 | 40604659 | 40604660 | rs35908558 | + | A | A/T | single | intron | 4 | 1000GENOMES,ABI,BUSHMAN,TISHKOFF, | 2 | 0.986703 |
SUGCT | chr7 | 40605089 | 40605090 | rs151236200 | + | A | -/A | deletion | intron | 2 | 1000GENOMES,LUNTER, | 2 | 0.012397 |
SUGCT | chr7 | 40605609 | 40605610 | rs184816480 | + | A | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.989440 |
SUGCT | chr7 | 40605678 | 40605679 | rs73689819 | + | A | A/G | single | intron | 3 | 1000GENOMES,ILLUMINA-UK,TISHKOFF, | 2 | 0.965596 |
SUGCT | chr7 | 40605857 | 40605858 | rs77412034 | + | T | G/T | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.012838 |
SUGCT | chr7 | 40605862 | 40605863 | rs111397767 | + | G | A/G | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.012838 |
SUGCT | chr7 | 40606840 | 40606841 | rs73689820 | + | G | A/G | single | intron | 3 | 1000GENOMES,ILLUMINA-UK,TISHKOFF, | 2 | 0.034404 |
SUGCT | chr7 | 40607029 | 40607030 | rs55881214 | + | G | A/G | single | intron | 4 | 1000GENOMES,HGSV,ILLUMINA-UK,TISHKOFF, | 2 | 0.034404 |
SUGCT | chr7 | 40607079 | 40607080 | rs78098107 | + | T | A/T | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.010082 |
SUGCT | chr7 | 40607389 | 40607390 | rs17171734 | + | G | A/G | single | intron | 11 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.079214 |
SUGCT | chr7 | 40607611 | 40607612 | rs56145015 | + | C | A/C | single | intron | 4 | 1000GENOMES,HGSV,ILLUMINA-UK,TISHKOFF, | 2 | 0.034404 |
SUGCT | chr7 | 40608558 | 40608559 | rs117508051 | + | G | C/G | single | intron | 1 | 1000GENOMES, | 2 | 0.012185 |
SUGCT | chr7 | 40608789 | 40608790 | rs10277710 | + | G | A/G | single | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.039291 |
SUGCT | chr7 | 40608829 | 40608830 | rs60011074 | + | G | A/G | single | intron | 8 | 1000GENOMES,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,HGSV,SSMP,TISHKOFF, | 2 | 0.085701 |
SUGCT | chr7 | 40608895 | 40608896 | rs149313883 | + | A | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.987144 |
SUGCT | chr7 | 40608991 | 40608992 | rs78651120 | + | A | A/C | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.989918 |
SUGCT | chr7 | 40609177 | 40609178 | rs73689821 | + | G | A/G | single | intron | 3 | 1000GENOMES,ILLUMINA-UK,TISHKOFF, | 2 | 0.034404 |
SUGCT | chr7 | 40609404 | 40609405 | rs59600362 | + | T | C/T | single | intron | 4 | 1000GENOMES,GMI,HGSV,SSMP, | 2 | 0.040035 |
SUGCT | chr7 | 40609744 | 40609745 | rs73308284 | + | C | C/T | single | intron | 6 | 1000GENOMES,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,SSMP,TISHKOFF, | 2 | 0.910714 |
SUGCT | chr7 | 40609971 | 40609972 | rs76116030 | + | G | G/T | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.989918 |
SUGCT | chr7 | 40610083 | 40610084 | rs78582276 | + | A | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.970819 |
SUGCT | chr7 | 40610539 | 40610540 | rs111965453 | + | C | C/T | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.989913 |
SUGCT | chr7 | 40610603 | 40610604 | rs10429076 | + | A | A/G | single | intron | 9 | 1000GENOMES,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.750802 |
SUGCT | chr7 | 40610718 | 40610719 | rs17171735 | + | G | A/G | single | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,PERLEGEN,TISHKOFF, | 2 | 0.039752 |
SUGCT | chr7 | 40611667 | 40611668 | rs17150948 | + | A | A/G | single | intron | 2 | 1000GENOMES,PERLEGEN, | 2 | 0.983942 |
SUGCT | chr7 | 40611676 | 40611677 | rs75225869 | + | C | A/C | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.013937 |
SUGCT | chr7 | 40612022 | 40612023 | rs740214 | + | T | C/T | single | intron | 14 | 1000GENOMES,ABI,AFFY,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SEQUENOM,SSMP,TSC-CSHL, | 2 | 0.104134 |
SUGCT | chr7 | 40612025 | 40612026 | rs140090496 | + | T | G/T | single | intron | 1 | 1000GENOMES, | 2 | 0.020202 |
SUGCT | chr7 | 40612101 | 40612102 | rs74882424 | + | C | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.984334 |
SUGCT | chr7 | 40612203 | 40612204 | rs76660961 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.030923 |
SUGCT | chr7 | 40612226 | 40612227 | rs6978599 | + | G | A/G | single | intron | 16 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.467689 |
SUGCT | chr7 | 40612249 | 40612250 | rs10263677 | + | A | A/G | single | intron | 15 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.760507 |
SUGCT | chr7 | 40612460 | 40612461 | rs17171737 | + | T | C/T | single | intron | 4 | 1000GENOMES,BUSHMAN,PERLEGEN,TISHKOFF, | 2 | 0.024408 |
SUGCT | chr7 | 40612573 | 40612574 | rs78992567 | + | C | C/T | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.978002 |
SUGCT | chr7 | 40613201 | 40613202 | rs111309201 | + | C | C/T | single | intron | 2 | 1000GENOMES,BCM-HGSC-SUB, | 2 | 0.986226 |
SUGCT | chr7 | 40613748 | 40613749 | rs74713248 | + | T | C/T | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.022008 |
SUGCT | chr7 | 40613870 | 40613871 | rs78613167 | + | C | C/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.970383 |
SUGCT | chr7 | 40613970 | 40613971 | rs17171739 | + | T | C/T | single | intron | 5 | 1000GENOMES,BUSHMAN,ILLUMINA,PERLEGEN,TISHKOFF, | 2 | 0.024408 |
SUGCT | chr7 | 40614252 | 40614253 | rs9632613 | + | C | A/C | single | intron | 10 | 1000GENOMES,ABI,BL,BUSHMAN,CSHL-HAPMAP,GMI,HGSV,SC_SNP,SSMP,TISHKOFF, | 2 | 0.258818 |
SUGCT | chr7 | 40614494 | 40614495 | rs73689822 | + | A | A/G | single | intron | 3 | 1000GENOMES,ILLUMINA-UK,TISHKOFF, | 2 | 0.965596 |
SUGCT | chr7 | 40614723 | 40614724 | rs113752396 | + | T | -/T | deletion | intron | 2 | 1000GENOMES,BUSHMAN, | 2 | 0.235321 |
SUGCT | chr7 | 40614725 | 40614725 | rs146860345 | + | - | -/GC | insertion | intron | 1 | 1000GENOMES, | 2 | 0.887971 |
SUGCT | chr7 | 40614726 | 40614726 | rs202056398 | + | - | -/C | insertion | intron | 1 | 1000GENOMES, | 2 | 0.890725 |
SUGCT | chr7 | 40614951 | 40614952 | rs79966273 | + | C | A/C | single | intron | 1 | 1000GENOMES, | 2 | 0.060487 |
SUGCT | chr7 | 40615040 | 40615041 | rs17171740 | + | A | A/G | single | intron | 6 | 1000GENOMES,BUSHMAN,ILLUMINA,KRIBB_YJKIM,PERLEGEN,TISHKOFF, | 2 | 0.972145 |
SUGCT | chr7 | 40615139 | 40615140 | rs73689824 | + | C | A/C | single | intron | 3 | 1000GENOMES,ILLUMINA-UK,TISHKOFF, | 2 | 0.034404 |
SUGCT | chr7 | 40615347 | 40615348 | rs187498197 | + | C | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.984389 |
SUGCT | chr7 | 40615399 | 40615400 | rs111624005 | + | C | A/C | single | intron | 2 | 1000GENOMES,COMPLETE_GENOMICS, | 2 | 0.018332 |
SUGCT | chr7 | 40615577 | 40615578 | rs62451207 | + | A | A/T | single | intron | 8 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,ENSEMBL,GMI,SSMP,TISHKOFF, | 2 | 0.923395 |
SUGCT | chr7 | 40615593 | 40615594 | rs76848702 | + | T | C/T | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.021560 |
SUGCT | chr7 | 40615670 | 40615670 | rs145629454 | + | - | -/T | insertion | intron | 3 | 1000GENOMES,LUNTER,TISHKOFF, | 2 | 0.978880 |
SUGCT | chr7 | 40615811 | 40615812 | rs11486857 | + | A | A/G | single | intron | 8 | 1000GENOMES,AFFY,HGSV,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SC_SNP,TISHKOFF, | 2 | 0.957552 |
SUGCT | chr7 | 40617976 | 40617977 | rs73308289 | + | G | A/G | single | intron | 7 | 1000GENOMES,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,SSMP,TISHKOFF, | 2 | 0.102106 |
SUGCT | chr7 | 40618050 | 40618051 | rs73689825 | + | G | A/G | single | intron | 2 | 1000GENOMES,ILLUMINA-UK, | 2 | 0.012385 |
SUGCT | chr7 | 40618676 | 40618677 | rs66582232 | + | T | C/T | single | intron | 7 | 1000GENOMES,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF, | 2 | 0.128205 |
SUGCT | chr7 | 40618791 | 40618792 | rs77642268 | + | A | A/G | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.978440 |
SUGCT | chr7 | 40618994 | 40618995 | rs6948900 | + | A | A/G | single | intron | 17 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.722398 |
SUGCT | chr7 | 40619253 | 40619254 | rs73689826 | + | T | C/T | single | intron | 3 | 1000GENOMES,ILLUMINA-UK,TISHKOFF, | 2 | 0.033945 |
SUGCT | chr7 | 40620057 | 40620058 | rs73689827 | + | T | G/T | single | intron | 3 | 1000GENOMES,ILLUMINA-UK,TISHKOFF, | 2 | 0.034404 |
SUGCT | chr7 | 40621414 | 40621415 | rs73308291 | + | C | C/T | single | intron | 8 | 1000GENOMES,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.912924 |
SUGCT | chr7 | 40621776 | 40621777 | rs28644197 | + | T | C/T | single | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,SSAHASNP,TISHKOFF, | 2 | 0.036697 |
SUGCT | chr7 | 40622381 | 40622382 | rs60999211 | + | G | A/G | single | intron | 8 | 1000GENOMES,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,HGSV,SSMP,TISHKOFF, | 2 | 0.089286 |
SUGCT | chr7 | 40622887 | 40622888 | rs76920942 | + | T | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.029181 |
SUGCT | chr7 | 40623313 | 40623314 | rs77568207 | + | C | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.971254 |
SUGCT | chr7 | 40624737 | 40624738 | rs3919491 | + | G | C/G | single | intron | 8 | 1000GENOMES,BL,COMPLETE_GENOMICS,PERLEGEN,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.082781 |
SUGCT | chr7 | 40625340 | 40625341 | rs28657711 | + | T | C/T | single | intron | 9 | 1000GENOMES,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,ILLUMINA-UK,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.229396 |
SUGCT | chr7 | 40625619 | 40625620 | rs73308300 | + | C | C/T | single | intron | 7 | 1000GENOMES,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,SSMP,TISHKOFF, | 2 | 0.910714 |
SUGCT | chr7 | 40626203 | 40626204 | rs149567684 | + | A | -/A | deletion | intron | 3 | 1000GENOMES,LUNTER,TISHKOFF, | 2 | 0.025712 |
SUGCT | chr7 | 40627516 | 40627517 | rs6975071 | + | T | G/T | single | intron | 3 | 1000GENOMES,BCM_SSAHASNP,GMI, | 2 | 0.151904 |
SUGCT | chr7 | 40627791 | 40627792 | rs115427159 | + | C | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.970383 |
SUGCT | chr7 | 40627929 | 40627930 | rs2329818 | + | G | A/G | single | intron | 8 | 1000GENOMES,ABI,BCM-HGSC-SUB,BL,ILLUMINA,KRIBB_YJKIM,PERLEGEN,TSC-CSHL, | 2 | 0.055984 |
SUGCT | chr7 | 40628143 | 40628144 | rs17171741 | + | G | C/G | single | intron | 6 | 1000GENOMES,AFFY,BUSHMAN,KRIBB_YJKIM,PERLEGEN,TISHKOFF, | 2 | 0.025903 |
SUGCT | chr7 | 40629453 | 40629454 | rs4720369 | + | G | G/T | single | intron | 19 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.000000 |
SUGCT | chr7 | 40629508 | 40629509 | rs78269747 | + | C | C/G | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.957354 |
SUGCT | chr7 | 40629610 | 40629611 | rs145909965 | + | C | -/C | deletion | intron | 3 | 1000GENOMES,LUNTER,SSMP, | 2 | 0.019743 |
SUGCT | chr7 | 40629805 | 40629806 | rs10262003 | + | G | C/G | single | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.039908 |
SUGCT | chr7 | 40630334 | 40630335 | rs73122176 | + | G | G/T | single | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA, | 2 | 0.982126 |
SUGCT | chr7 | 40630625 | 40630626 | rs115624843 | + | T | A/T | single | intron | 4 | 1000GENOMES,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.015244 |
SUGCT | chr7 | 40630755 | 40630756 | rs113188487 | + | T | C/T | single | intron | 5 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,SSMP,TISHKOFF, | 2 | 0.090201 |
SUGCT | chr7 | 40631016 | 40631017 | rs59757791 | + | A | A/C | single | intron | 4 | 1000GENOMES,HGSV,ILLUMINA-UK,TISHKOFF, | 2 | 0.967431 |
SUGCT | chr7 | 40631140 | 40631141 | rs4723972 | + | T | C/T | single | intron | 7 | 1000GENOMES,BL,BUSHMAN,COMPLETE_GENOMICS,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.145540 |
SUGCT | chr7 | 40631384 | 40631385 | rs4720370 | + | T | A/T | single | intron | 12 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,KRIBB_YJKIM,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.088334 |
SUGCT | chr7 | 40631414 | 40631415 | rs28479858 | + | T | A/T | single | intron | 4 | 1000GENOMES,ABI,COMPLETE_GENOMICS,SSAHASNP, | 2 | 0.036697 |
SUGCT | chr7 | 40631696 | 40631697 | rs11974721 | + | A | A/C | single | intron | 4 | 1000GENOMES,ABI,CSHL-HAPMAP,TISHKOFF, | 2 | 0.974923 |
SUGCT | chr7 | 40631825 | 40631826 | rs1019018 | + | C | C/T | single | intron | 15 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.847595 |
SUGCT | chr7 | 40632119 | 40632120 | rs73689828 | + | C | C/T | single | intron | 3 | 1000GENOMES,ILLUMINA-UK,TISHKOFF, | 2 | 0.965596 |
SUGCT | chr7 | 40632721 | 40632722 | rs7786908 | + | A | A/G | single | intron | 23 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.029024 |
SUGCT | chr7 | 40633460 | 40633461 | rs116595120 | + | C | A/C/G | single | intron | 3 | 1000GENOMES,ILLUMINA,TISHKOFF, | 3 | 0.027732 |
SUGCT | chr7 | 40633847 | 40633848 | rs144012787 | + | G | A/G | single | intron | 3 | 1000GENOMES,SSMP,TISHKOFF, | 2 | 0.028926 |
SUGCT | chr7 | 40634019 | 40634020 | rs79135099 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.029181 |
SUGCT | chr7 | 40634314 | 40634315 | rs11974322 | + | T | C/T | single | intron | 14 | 1000GENOMES,ABI,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,HGSV,ILLUMINA,ILLUMINA-UK,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.225912 |
SUGCT | chr7 | 40634381 | 40634382 | rs74907746 | + | A | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.969948 |
SUGCT | chr7 | 40634967 | 40634968 | rs62451209 | + | T | C/T | single | intron | 4 | 1000GENOMES,BCMHGSC_JDW,COMPLETE_GENOMICS,ENSEMBL, | 2 | 0.014207 |
SUGCT | chr7 | 40635673 | 40635673 | rs201450519 | + | - | -/T | insertion | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.986685 |
SUGCT | chr7 | 40636076 | 40636077 | rs73689829 | + | T | A/T | single | intron | 3 | 1000GENOMES,ILLUMINA-UK,TISHKOFF, | 2 | 0.034404 |
SUGCT | chr7 | 40636434 | 40636435 | rs6974959 | + | G | G/T | single | intron | 4 | 1000GENOMES,BCM_SSAHASNP,GMI,ILLUMINA, | 2 | 0.981467 |
SUGCT | chr7 | 40637453 | 40637454 | rs73689830 | + | A | A/T | single | intron | 3 | 1000GENOMES,ILLUMINA-UK,TISHKOFF, | 2 | 0.966055 |
SUGCT | chr7 | 40638100 | 40638101 | rs917204 | + | C | C/T | single | intron | 11 | 1000GENOMES,ABI,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,ILLUMINA-UK,PERLEGEN,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.784356 |
SUGCT | chr7 | 40638314 | 40638315 | rs2329819 | + | G | C/G | single | intron | 14 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.225602 |
SUGCT | chr7 | 40638364 | 40638365 | rs11973006 | + | T | G/T | single | intron | 14 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.259941 |
SUGCT | chr7 | 40638461 | 40638462 | rs17171745 | + | G | G/T | single | intron | 4 | 1000GENOMES,HGSV,PERLEGEN,SSMP, | 3 | 0.917921 |
SUGCT | chr7 | 40638542 | 40638543 | rs76463179 | + | C | A/C | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.028310 |
SUGCT | chr7 | 40638870 | 40638871 | rs73310208 | + | G | A/G | single | intron | 6 | 1000GENOMES,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,SSMP,TISHKOFF, | 2 | 0.078827 |
SUGCT | chr7 | 40639355 | 40639363 | rs141495759 | + | TCAAGCAG | -/TCAAGCAG | deletion | intron | 2 | 1000GENOMES,LUNTER, | 2 | 0.016070 |
SUGCT | chr7 | 40639529 | 40639530 | rs77436121 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.029181 |
SUGCT | chr7 | 40639572 | 40639573 | rs76489706 | + | C | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.972125 |
SUGCT | chr7 | 40641868 | 40641869 | rs77239919 | + | C | C/T | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.983899 |
SUGCT | chr7 | 40641968 | 40641969 | rs1859660 | + | G | A/G | single | intron | 12 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ILLUMINA-UK,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.193325 |
SUGCT | chr7 | 40642046 | 40642047 | rs140559803 | + | C | C/T | single | intron | 4 | 1000GENOMES,GMI,SSMP,TISHKOFF, | 2 | 0.947658 |
SUGCT | chr7 | 40642154 | 40642155 | rs9886164 | + | T | A/T | single | intron | 3 | 1000GENOMES,BCM_SSAHASNP,TISHKOFF, | 2 | 0.033023 |
SUGCT | chr7 | 40644087 | 40644088 | rs7784455 | + | G | A/G | single | intron | 5 | 1000GENOMES,ILLUMINA,KRIBB_YJKIM,TISHKOFF,WI_SSAHASNP, | 2 | 0.036673 |
SUGCT | chr7 | 40644660 | 40644661 | rs75598244 | + | G | A/G | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.011463 |
SUGCT | chr7 | 40645260 | 40645261 | rs6956277 | + | A | A/G | single | intron | 11 | 1000GENOMES,BCM-HGSC-SUB,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.751063 |
SUGCT | chr7 | 40645644 | 40645645 | rs80083059 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.027875 |
SUGCT | chr7 | 40645807 | 40645808 | rs57955744 | + | C | C/T | single | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,HGSV,TISHKOFF, | 2 | 0.962844 |
SUGCT | chr7 | 40646300 | 40646301 | rs10486810 | + | T | C/T | single | intron | 15 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.229271 |
SUGCT | chr7 | 40647104 | 40647105 | rs17171746 | + | T | G/T | single | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,PERLEGEN,TISHKOFF, | 2 | 0.040481 |
SUGCT | chr7 | 40647148 | 40647149 | rs11978016 | + | C | A/C | single | intron | 5 | 1000GENOMES,ABI,CSHL-HAPMAP,ILLUMINA,TISHKOFF, | 2 | 0.023498 |
SUGCT | chr7 | 40648209 | 40648210 | rs17171747 | + | T | A/T | single | intron | 10 | 1000GENOMES,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.167092 |
SUGCT | chr7 | 40648387 | 40648388 | rs73689831 | + | T | C/T | single | intron | 3 | 1000GENOMES,ILLUMINA-UK,TISHKOFF, | 2 | 0.033945 |
SUGCT | chr7 | 40648513 | 40648514 | rs17171748 | + | C | C/T | single | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,PERLEGEN,TISHKOFF, | 2 | 0.956966 |
SUGCT | chr7 | 40648940 | 40648941 | rs7782754 | + | G | A/G | single | intron | 3 | 1000GENOMES,TISHKOFF,WI_SSAHASNP, | 2 | 0.036272 |
SUGCT | chr7 | 40648946 | 40648947 | rs149547000 | + | C | C/T | single | intron | 3 | 1000GENOMES,SSMP,TISHKOFF, | 2 | 0.952709 |
SUGCT | chr7 | 40648981 | 40648982 | rs181533537 | + | G | G/T | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.987603 |
SUGCT | chr7 | 40649044 | 40649045 | rs112837257 | + | C | C/T | single | intron | 8 | 1000GENOMES,BCM-HGSC-SUB,BL,COMPLETE_GENOMICS,GMI,MPI_MOLGEN,SSMP,TISHKOFF, | 2 | 0.877064 |
SUGCT | chr7 | 40649082 | 40649083 | rs113276434 | + | A | A/G | single | intron | 9 | 1000GENOMES,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,MPI_MOLGEN,SSMP,TISHKOFF, | 2 | 0.873052 |
SUGCT | chr7 | 40649583 | 40649584 | rs1034804 | + | G | G/T | single | intron | 10 | 1000GENOMES,ABI,AFFY,COMPLETE_GENOMICS,ILLUMINA,KRIBB_YJKIM,PERLEGEN,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 2 | 0.944589 |
SUGCT | chr7 | 40650154 | 40650155 | rs73689832 | + | T | G/T | single | intron | 3 | 1000GENOMES,ILLUMINA-UK,TISHKOFF, | 2 | 0.033945 |
SUGCT | chr7 | 40650726 | 40650727 | rs201642440 | + | T | -/T | deletion | intron | 3 | 1000GENOMES,LUNTER,TISHKOFF, | 2 | 0.012397 |
SUGCT | chr7 | 40650854 | 40650855 | rs10486811 | + | G | A/G | single | intron | 13 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.261624 |
SUGCT | chr7 | 40651120 | 40651121 | rs75935112 | + | A | A/G | single | intron | 4 | 1000GENOMES,BCM-HGSC-SUB,BL,MPI_MOLGEN, | 2 | 0.939077 |
SUGCT | chr7 | 40651187 | 40651188 | rs57544160 | + | T | C/T | single | intron | 4 | 1000GENOMES,HGSV,ILLUMINA-UK,TISHKOFF, | 2 | 0.033945 |
SUGCT | chr7 | 40651611 | 40651612 | rs181323922 | + | T | C/T | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.062902 |
SUGCT | chr7 | 40652473 | 40652474 | rs112197731 | + | G | A/G | single | intron | 7 | 1000GENOMES,BCM-HGSC-SUB,BL,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF, | 2 | 0.123853 |
SUGCT | chr7 | 40652730 | 40652730 | rs199932735 | + | - | -/A | insertion | intron | 1 | 1000GENOMES, | 2 | 0.989440 |
SUGCT | chr7 | 40652740 | 40652741 | rs111437807 | + | T | A/T | single | intron | 2 | 1000GENOMES,BCM-HGSC-SUB, | 2 | 0.013774 |
SUGCT | chr7 | 40653410 | 40653411 | rs143805491 | + | G | C/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.033517 |
SUGCT | chr7 | 40653473 | 40653474 | rs57792814 | + | G | A/G | single | intron | 2 | 1000GENOMES,HGSV, | 2 | 0.011938 |
SUGCT | chr7 | 40653683 | 40653684 | rs6462986 | + | A | A/G | single | intron | 20 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SC_SNP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.103732 |
SUGCT | chr7 | 40653761 | 40653762 | rs76729377 | + | G | G/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.972125 |
SUGCT | chr7 | 40654900 | 40654900 | rs113636385 | + | - | -/T | insertion | intron | 5 | 1000GENOMES,BILGI_BIOE,BUSHMAN,LUNTER,SSMP, | 2 | 0.747706 |
SUGCT | chr7 | 40655279 | 40655280 | rs68082095 | + | G | A/G | single | intron | 8 | 1000GENOMES,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF, | 2 | 0.124084 |
SUGCT | chr7 | 40656038 | 40656039 | rs150439154 | + | C | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.976584 |
SUGCT | chr7 | 40656274 | 40656275 | rs6948724 | + | A | A/G | single | intron | 14 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA-UK,KRIBB_YJKIM,PJP,SSMP,TISHKOFF, | 2 | 0.740741 |
SUGCT | chr7 | 40656396 | 40656397 | rs73122188 | + | A | A/G | single | intron | 8 | 1000GENOMES,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF, | 2 | 0.824553 |
SUGCT | chr7 | 40656562 | 40656563 | rs10241399 | + | A | A/G | single | intron | 7 | 1000GENOMES,COMPLETE_GENOMICS,HGSV,ILLUMINA,KRIBB_YJKIM,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.941176 |
SUGCT | chr7 | 40656611 | 40656612 | rs77760892 | + | A | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.971690 |
SUGCT | chr7 | 40656757 | 40656758 | rs80323311 | + | A | A/G | single | intron | 3 | 1000GENOMES,ILLUMINA,TISHKOFF, | 2 | 0.983449 |
SUGCT | chr7 | 40657492 | 40657493 | rs34523428 | + | G | A/G | single | intron | 9 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.078248 |
SUGCT | chr7 | 40658214 | 40658215 | rs75648964 | + | T | C/T | single | intron | 3 | 1000GENOMES,GMI,ILLUMINA, | 2 | 0.015231 |
SUGCT | chr7 | 40658279 | 40658280 | rs4720371 | + | C | A/C | single | intron | 10 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,ILLUMINA-UK,PERLEGEN,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.131966 |
SUGCT | chr7 | 40658928 | 40658929 | rs139491311 | + | A | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.984848 |
SUGCT | chr7 | 40659090 | 40659091 | rs149669423 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.011478 |
SUGCT | chr7 | 40659720 | 40659721 | rs6975269 | + | A | A/G | single | intron | 4 | 1000GENOMES,AFFY,BCM_SSAHASNP,KRIBB_YJKIM, | 2 | 0.983216 |
SUGCT | chr7 | 40660062 | 40660063 | rs74892192 | + | C | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.983029 |
SUGCT | chr7 | 40660639 | 40660640 | rs11980464 | + | C | C/T | single | intron | 10 | 1000GENOMES,ABI,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.766493 |
SUGCT | chr7 | 40660732 | 40660733 | rs11973745 | + | A | A/C | single | intron | 4 | 1000GENOMES,ABI,CSHL-HAPMAP,TISHKOFF, | 2 | 0.972561 |
SUGCT | chr7 | 40662353 | 40662354 | rs115356472 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.028310 |
SUGCT | chr7 | 40662421 | 40662422 | rs78225452 | + | T | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.028746 |
SUGCT | chr7 | 40663622 | 40663623 | rs115156761 | + | A | A/G | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.976916 |
SUGCT | chr7 | 40663655 | 40663656 | rs76245141 | + | T | C/T | single | intron | 2 | 1000GENOMES,BL, | 2 | 0.059140 |
SUGCT | chr7 | 40663733 | 40663734 | rs76616295 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.029181 |
SUGCT | chr7 | 40663812 | 40663813 | rs79190412 | + | C | C/T | single | intron | 4 | 1000GENOMES,BUSHMAN,ILLUMINA,TISHKOFF, | 2 | 0.986697 |
SUGCT | chr7 | 40663908 | 40663909 | rs6962853 | + | A | A/T | single | intron | 9 | 1000GENOMES,BCM-HGSC-SUB,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF, | 2 | 0.876719 |
SUGCT | chr7 | 40664411 | 40664412 | rs6964059 | + | G | A/G | single | intron | 9 | BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM, | 2 | 0.288732 |
SUGCT | chr7 | 40665202 | 40665203 | rs76589113 | + | T | C/T | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.038294 |
SUGCT | chr7 | 40665410 | 40665411 | rs61107746 | + | T | C/T | single | intron | 10 | 1000GENOMES,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA-UK,PJP,SSMP,TISHKOFF, | 2 | 0.256176 |
SUGCT | chr7 | 40665618 | 40665619 | rs79038577 | + | A | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.987603 |
SUGCT | chr7 | 40665636 | 40665637 | rs75288761 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.016115 |
SUGCT | chr7 | 40665809 | 40665810 | rs73122194 | + | G | A/G | single | intron | 5 | 1000GENOMES,BGI,COMPLETE_GENOMICS,GMI,SSMP, | 2 | 0.097159 |
SUGCT | chr7 | 40665967 | 40665973 | rs146495152 | + | GCTTCA | -/GCTTCA | deletion | intron | 1 | 1000GENOMES, | 2 | 0.021579 |
SUGCT | chr7 | 40666480 | 40666481 | rs77982234 | + | A | A/C | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.977982 |
SUGCT | chr7 | 40667105 | 40667106 | rs10264524 | + | A | A/G | single | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.961468 |
SUGCT | chr7 | 40667848 | 40667849 | rs80355292 | + | G | A/G | single | intron | 5 | 1000GENOMES,GMI,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.120662 |
SUGCT | chr7 | 40667857 | 40667858 | rs73310219 | + | C | C/T | single | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.961468 |
SUGCT | chr7 | 40668078 | 40668079 | rs117887369 | + | T | C/T | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.016971 |
SUGCT | chr7 | 40668591 | 40668592 | rs78834953 | + | C | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.987805 |
SUGCT | chr7 | 40669297 | 40669298 | rs76011612 | + | C | C/T | single | intron | 4 | 1000GENOMES,BUSHMAN,ILLUMINA,TISHKOFF, | 2 | 0.977982 |
SUGCT | chr7 | 40670821 | 40670821 | rs200000243 | + | - | -/T | insertion | intron | 1 | 1000GENOMES, | 2 | 0.981175 |
SUGCT | chr7 | 40671048 | 40671049 | rs11975859 | + | T | G/T | single | intron | 4 | 1000GENOMES,ABI,CSHL-HAPMAP,TISHKOFF, | 2 | 0.012825 |
SUGCT | chr7 | 40671233 | 40671234 | rs1859705 | + | G | G/T | single | intron | 13 | 1000GENOMES,ABI,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA-UK,PERLEGEN,SC_SNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.756443 |
SUGCT | chr7 | 40672688 | 40672689 | rs11977013 | + | T | C/T | single | intron | 12 | 1000GENOMES,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,SSMP,TISHKOFF, | 2 | 0.267643 |
SUGCT | chr7 | 40674912 | 40674912 | rs201178821 | + | - | -/A | insertion | intron | 1 | 1000GENOMES, | 2 | 0.988522 |
SUGCT | chr7 | 40675126 | 40675127 | rs79765825 | + | T | C/T | single | intron | 3 | 1000GENOMES,ILLUMINA,TISHKOFF, | 2 | 0.013502 |
SUGCT | chr7 | 40675171 | 40675172 | rs58275184 | + | C | A/C | single | intron | 7 | 1000GENOMES,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,HGSV,SSMP,TISHKOFF, | 2 | 0.067369 |
SUGCT | chr7 | 40675698 | 40675699 | rs74970878 | + | A | A/G | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.976605 |
SUGCT | chr7 | 40675941 | 40675942 | rs79099594 | + | A | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.983885 |
SUGCT | chr7 | 40676065 | 40676066 | rs73310222 | + | T | C/T | single | intron | 7 | 1000GENOMES,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,SSMP,TISHKOFF, | 2 | 0.067828 |
SUGCT | chr7 | 40676103 | 40676104 | rs73310225 | + | T | G/T | single | intron | 7 | 1000GENOMES,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,SSMP,TISHKOFF, | 2 | 0.068286 |
SUGCT | chr7 | 40676555 | 40676556 | rs78199740 | + | T | C/T | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.024312 |
SUGCT | chr7 | 40676991 | 40676992 | rs73310227 | + | C | C/T | single | intron | 7 | 1000GENOMES,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,SSMP,TISHKOFF, | 2 | 0.932631 |
SUGCT | chr7 | 40677798 | 40677799 | rs17171749 | + | A | A/T | single | intron | 9 | 1000GENOMES,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,ILLUMINA-UK,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.830538 |
SUGCT | chr7 | 40678067 | 40678068 | rs73689834 | + | T | C/T | single | intron | 5 | 1000GENOMES,BUSHMAN,ILLUMINA,ILLUMINA-UK,TISHKOFF, | 2 | 0.052246 |
SUGCT | chr7 | 40678134 | 40678135 | rs17171750 | + | T | A/T | single | intron | 10 | 1000GENOMES,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,HGSV,ILLUMINA-UK,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.205326 |
SUGCT | chr7 | 40678590 | 40678591 | rs77336303 | + | A | A/G | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.967798 |
SUGCT | chr7 | 40679472 | 40679473 | rs17171751 | + | T | C/T | single | intron | 3 | 1000GENOMES,PERLEGEN,SSMP, | 2 | 0.012783 |
SUGCT | chr7 | 40679841 | 40679842 | rs73310231 | + | A | A/G | single | intron | 7 | 1000GENOMES,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,SSMP,TISHKOFF, | 2 | 0.931777 |
SUGCT | chr7 | 40679947 | 40679948 | rs73689835 | + | T | C/T | single | intron | 3 | 1000GENOMES,ILLUMINA-UK,TISHKOFF, | 2 | 0.043578 |
SUGCT | chr7 | 40680434 | 40680435 | rs76332325 | + | A | A/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.989547 |
SUGCT | chr7 | 40680580 | 40680581 | rs114854785 | + | T | C/T | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.012631 |
SUGCT | chr7 | 40680975 | 40680976 | rs7459324 | + | T | C/T | single | intron | 14 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,SC_JCM,SSMP,TISHKOFF, | 2 | 0.187760 |
SUGCT | chr7 | 40681795 | 40681796 | rs75281466 | + | C | C/T | single | intron | 3 | 1000GENOMES,BCM-HGSC-SUB,BL, | 2 | 0.956989 |
SUGCT | chr7 | 40682538 | 40682539 | rs79688422 | + | C | C/T | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.984769 |
SUGCT | chr7 | 40682602 | 40682603 | rs145334473 | + | C | C/T | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.984389 |
SUGCT | chr7 | 40683344 | 40683345 | rs76486956 | + | C | A/C | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.023394 |
SUGCT | chr7 | 40683650 | 40683651 | rs112749324 | + | A | A/G | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.976605 |
SUGCT | chr7 | 40683851 | 40683852 | rs886765 | + | C | C/T | single | intron | 15 | 1000GENOMES,ABI,AFFY,BGI,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SC_JCM,SSMP,TSC-CSHL, | 2 | 0.918571 |
SUGCT | chr7 | 40684409 | 40684410 | rs117170105 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.014360 |
SUGCT | chr7 | 40684450 | 40684451 | rs114329433 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.012195 |
SUGCT | chr7 | 40684844 | 40684845 | rs114664551 | + | T | C/T | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.016115 |
SUGCT | chr7 | 40684905 | 40684906 | rs78429092 | + | A | A/G | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.966493 |
SUGCT | chr7 | 40685106 | 40685107 | rs75466335 | + | G | A/G | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.015728 |
SUGCT | chr7 | 40685181 | 40685182 | rs73689836 | + | C | C/G | single | intron | 3 | 1000GENOMES,ILLUMINA-UK,TISHKOFF, | 2 | 0.976147 |
SUGCT | chr7 | 40685201 | 40685202 | rs17527624 | + | C | C/T | single | intron | 7 | 1000GENOMES,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SNP500CANCER,SSMP,TISHKOFF, | 2 | 0.950284 |
SUGCT | chr7 | 40685555 | 40685556 | rs10282307 | + | T | C/T | single | intron | 5 | 1000GENOMES,COMPLETE_GENOMICS,CSHL-HAPMAP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.040509 |
SUGCT | chr7 | 40685810 | 40685811 | rs10282661 | + | T | C/T | single | intron | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.496624 |
SUGCT | chr7 | 40685887 | 40685888 | rs71536695 | + | C | C/T | single | intron | 4 | 1000GENOMES,ENSEMBL,HUMANGENOME_JCVI,ILLUMINA, | 2 | 0.988084 |
SUGCT | chr7 | 40686212 | 40686213 | rs7782395 | + | C | C/T | single | intron | 5 | 1000GENOMES,COMPLETE_GENOMICS,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.959677 |
SUGCT | chr7 | 40686242 | 40686243 | rs7782411 | + | C | C/T | single | intron | 5 | 1000GENOMES,COMPLETE_GENOMICS,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.959677 |
SUGCT | chr7 | 40686345 | 40686349 | rs10589237 | + | TCTG | -/TCTG | deletion | intron | 3 | 1000GENOMES,DEVINE_LAB,LUNTER, | 2 | 0.037649 |
SUGCT | chr7 | 40686454 | 40686455 | rs35785820 | + | T | C/T | single | intron | 4 | 1000GENOMES,ABI,BUSHMAN,TISHKOFF, | 2 | 0.025665 |
SUGCT | chr7 | 40687149 | 40687150 | rs6954401 | + | G | A/G | single | intron | 13 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.233615 |
SUGCT | chr7 | 40687364 | 40687365 | rs144374837 | + | G | G/T | single | intron | 1 | 1000GENOMES, | 2 | 0.980716 |
SUGCT | chr7 | 40687374 | 40687375 | rs78607510 | + | A | A/C | single | intron | 4 | 1000GENOMES,BUSHMAN,ILLUMINA-UK,TISHKOFF, | 2 | 0.947296 |
SUGCT | chr7 | 40687436 | 40687437 | rs112303635 | + | T | G/T | single | intron | 3 | 1000GENOMES,BCM-HGSC-SUB,ILLUMINA, | 2 | 0.012397 |
SUGCT | chr7 | 40687753 | 40687754 | rs140074107 | + | G | A/G | single | intron | 3 | 1000GENOMES,ILLUMINA,SSMP, | 2 | 0.011019 |
SUGCT | chr7 | 40687954 | 40687955 | rs10226881 | + | A | A/G | single | intron | 5 | 1000GENOMES,COMPLETE_GENOMICS,HGSV,PERLEGEN,WUGSC_SSAHASNP, | 2 | 0.958789 |
SUGCT | chr7 | 40687983 | 40687984 | rs10256576 | + | G | G/T | single | intron | 12 | 1000GENOMES,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,HGSV,ILLUMINA,ILLUMINA-UK,PERLEGEN,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.789818 |
SUGCT | chr7 | 40688296 | 40688297 | rs73122200 | + | T | C/T | single | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA, | 2 | 0.016514 |
SUGCT | chr7 | 40688776 | 40688777 | rs61597279 | + | T | -/T | deletion | intron | 4 | 1000GENOMES,BILGI_BIOE,HGSV,LUNTER, | 2 | 0.118916 |
SUGCT | chr7 | 40689000 | 40689000 | rs200049759 | + | - | -/G | insertion | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.985767 |
SUGCT | chr7 | 40689007 | 40689008 | rs10260770 | + | G | C/G | single | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.038073 |
SUGCT | chr7 | 40689864 | 40689865 | rs79443486 | + | G | C/G | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.026147 |
SUGCT | chr7 | 40689926 | 40689927 | rs77761113 | + | G | A/G | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.026147 |
SUGCT | chr7 | 40690046 | 40690047 | rs79785350 | + | G | G/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.961237 |
SUGCT | chr7 | 40690275 | 40690276 | rs73310238 | + | A | A/G | single | intron | 6 | 1000GENOMES,BCM-HGSC-SUB,BL,COMPLETE_GENOMICS,SSMP,TISHKOFF, | 2 | 0.931651 |
SUGCT | chr7 | 40690867 | 40690868 | rs112459903 | + | C | C/T | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.973853 |
SUGCT | chr7 | 40690925 | 40690926 | rs113542205 | + | A | A/G | single | intron | 7 | 1000GENOMES,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,SSMP,TISHKOFF, | 2 | 0.905089 |
SUGCT | chr7 | 40690976 | 40690977 | rs10239229 | + | A | A/G | single | intron | 6 | 1000GENOMES,COMPLETE_GENOMICS,HGSV,PJP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.961996 |
SUGCT | chr7 | 40691228 | 40691229 | rs73310243 | + | T | C/T | single | intron | 6 | 1000GENOMES,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,SSMP,TISHKOFF, | 2 | 0.095325 |
SUGCT | chr7 | 40691330 | 40691331 | rs9648488 | + | G | A/G | single | intron | 5 | 1000GENOMES,CSHL-HAPMAP,ILLUMINA,SC_SNP,TISHKOFF, | 2 | 0.011556 |
SUGCT | chr7 | 40692380 | 40692381 | rs73310244 | + | A | A/G | single | intron | 8 | 1000GENOMES,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.940422 |
SUGCT | chr7 | 40692448 | 40692449 | rs17171753 | + | A | A/T | single | intron | 10 | 1000GENOMES,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,HGSV,ILLUMINA-UK,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.791828 |
SUGCT | chr7 | 40693150 | 40693151 | rs4492257 | + | G | A/G | single | intron | 9 | 1000GENOMES,COMPLETE_GENOMICS,DEVINE_LAB,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SC_JCM,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.058514 |
SUGCT | chr7 | 40693420 | 40693421 | rs56850009 | + | T | C/T | single | intron | 6 | 1000GENOMES,BUSHMAN,HGSV,ILLUMINA,ILLUMINA-UK,TISHKOFF, | 2 | 0.051787 |
SUGCT | chr7 | 40694147 | 40694148 | rs59580052 | + | C | C/T | single | intron | 12 | 1000GENOMES,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PJP,SSMP, | 2 | 0.884264 |
SUGCT | chr7 | 40694892 | 40694892 | rs148915118 | + | - | -/A | insertion | intron | 4 | 1000GENOMES,BILGI_BIOE,LUNTER,SSMP, | 2 | 0.801194 |
SUGCT | chr7 | 40694945 | 40694946 | rs60699942 | + | C | C/T | single | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,HGSV,TISHKOFF, | 2 | 0.961927 |
SUGCT | chr7 | 40696042 | 40696043 | rs116409671 | + | C | C/T | single | intron | 3 | 1000GENOMES,ILLUMINA,SSMP, | 2 | 0.986934 |
SUGCT | chr7 | 40696059 | 40696059 | rs199579225 | + | - | -/TAGCTGGCACCTG | insertion | intron | 1 | 1000GENOMES, | 2 | 0.987144 |
SUGCT | chr7 | 40696985 | 40696986 | rs17171754 | + | G | A/G | single | intron | 6 | 1000GENOMES,AFFY,COMPLETE_GENOMICS,KRIBB_YJKIM,PERLEGEN,TISHKOFF, | 2 | 0.055180 |
SUGCT | chr7 | 40697108 | 40697108 | rs35835363 | + | - | -/T | insertion | intron | 8 | 1000GENOMES,ABI,BL,DEVINE_LAB,GMI,HUMANGENOME_JCVI,LUNTER,SSMP, | 2 | 0.636697 |
SUGCT | chr7 | 40697183 | 40697184 | rs113276867 | + | G | A/G | single | intron | 4 | 1000GENOMES,BUSHMAN,SSMP,TISHKOFF, | 2 | 0.014679 |
SUGCT | chr7 | 40697282 | 40697283 | rs141957787 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.013774 |
SUGCT | chr7 | 40697402 | 40697403 | rs35336896 | + | A | A/G | single | intron | 11 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.859232 |
SUGCT | chr7 | 40697455 | 40697456 | rs79279048 | + | A | A/G | single | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA, | 2 | 0.983486 |
SUGCT | chr7 | 40697881 | 40697882 | rs10251707 | + | T | C/T | single | intron | 13 | 1000GENOMES,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.224537 |
SUGCT | chr7 | 40697936 | 40697937 | rs77750218 | + | T | C/T | single | intron | 5 | 1000GENOMES,BL,GMI,SSMP,TISHKOFF, | 2 | 0.116188 |
SUGCT | chr7 | 40698888 | 40698889 | rs79325702 | + | T | G/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.037456 |
SUGCT | chr7 | 40698906 | 40698907 | rs73122202 | + | A | A/G | single | intron | 4 | 1000GENOMES,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.945364 |
SUGCT | chr7 | 40699188 | 40699189 | rs10280713 | + | G | A/G | single | intron | 17 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.340451 |
SUGCT | chr7 | 40700101 | 40700102 | rs6966833 | + | C | C/T | single | intron | 7 | 1000GENOMES,BCM_SSAHASNP,COMPLETE_GENOMICS,HGSV,PJP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.950549 |
SUGCT | chr7 | 40700499 | 40700500 | rs6967359 | + | A | A/G | single | intron | 10 | 1000GENOMES,BCM_SSAHASNP,COMPLETE_GENOMICS,CSHL-HAPMAP,HGSV,ILLUMINA,KRIBB_YJKIM,PERLEGEN,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.928694 |
SUGCT | chr7 | 40700616 | 40700617 | rs12701825 | + | A | A/T | single | intron | 15 | 1000GENOMES,ABI,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.659738 |
SUGCT | chr7 | 40700632 | 40700633 | rs73124004 | + | A | A/G | single | intron | 6 | 1000GENOMES,BL,BUSHMAN,GMI,SSMP,TISHKOFF, | 2 | 0.833945 |
SUGCT | chr7 | 40700901 | 40700902 | rs73124005 | + | C | C/T | single | intron | 4 | 1000GENOMES,GMI,SSMP,TISHKOFF, | 2 | 0.896523 |
SUGCT | chr7 | 40701010 | 40701011 | rs13226179 | + | C | C/T | single | intron | 8 | 1000GENOMES,ABI,ENSEMBL,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PJP,SSAHASNP, | 2 | 0.979898 |
SUGCT | chr7 | 40701224 | 40701225 | rs144151283 | + | T | C/T | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.016988 |
SUGCT | chr7 | 40701352 | 40701353 | rs34185581 | + | T | C/T | single | intron | 14 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSMP,TISHKOFF, | 2 | 0.337591 |
SUGCT | chr7 | 40701658 | 40701659 | rs73124006 | + | G | A/G | single | intron | 6 | 1000GENOMES,BL,BUSHMAN,GMI,SSMP,TISHKOFF, | 2 | 0.156422 |
SUGCT | chr7 | 40701707 | 40701708 | rs73124009 | + | G | A/G | single | intron | 5 | 1000GENOMES,BL,GMI,SSMP,TISHKOFF, | 2 | 0.103891 |
SUGCT | chr7 | 40701722 | 40701723 | rs12701826 | + | C | C/G | single | intron | 16 | 1000GENOMES,AFFY,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,KRIBB_YJKIM,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.617174 |
SUGCT | chr7 | 40702324 | 40702325 | rs76115333 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.038328 |
SUGCT | chr7 | 40702502 | 40702503 | rs58811666 | + | C | C/T | single | intron | 6 | 1000GENOMES,BGI,GMI,HGSV,ILLUMINA,SSMP, | 2 | 0.957789 |
SUGCT | chr7 | 40703117 | 40703118 | rs191485647 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.017906 |
SUGCT | chr7 | 40703288 | 40703289 | rs17171756 | + | G | C/G | single | intron | 7 | 1000GENOMES,BL,BUSHMAN,GMI,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.137833 |
SUGCT | chr7 | 40703539 | 40703540 | rs73310253 | + | A | A/G | single | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.948165 |
SUGCT | chr7 | 40704691 | 40704692 | rs6971379 | + | T | C/T | single | intron | 7 | 1000GENOMES,BCM_SSAHASNP,COMPLETE_GENOMICS,PERLEGEN,SC_SNP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.052593 |
SUGCT | chr7 | 40704733 | 40704734 | rs75857771 | + | G | A/G | single | intron | 4 | 1000GENOMES,BUSHMAN,ILLUMINA-UK,TISHKOFF, | 2 | 0.025641 |
SUGCT | chr7 | 40704865 | 40704866 | rs2329820 | + | T | C/T | single | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,PJP,SC_SNP,SSMP,TSC-CSHL,WUGSC_SSAHASNP, | 2 | 0.822344 |
SUGCT | chr7 | 40705145 | 40705146 | rs10246676 | + | G | A/G | single | intron | 6 | 1000GENOMES,CSHL-HAPMAP,HGSV,ILLUMINA,KRIBB_YJKIM,WUGSC_SSAHASNP, | 2 | 0.068362 |
SUGCT | chr7 | 40705878 | 40705879 | rs138295007 | + | G | G/T | single | intron | 1 | 1000GENOMES, | 2 | 0.989440 |
SUGCT | chr7 | 40705904 | 40705905 | rs116060460 | + | C | C/T | single | intron | 5 | 1000GENOMES,BL,GMI,SSMP,TISHKOFF, | 2 | 0.861987 |
SUGCT | chr7 | 40705946 | 40705946 | rs202090281 | + | - | -/AAAA | insertion | intron | 1 | 1000GENOMES, | 2 | 0.858586 |
SUGCT | chr7 | 40705948 | 40705949 | rs111478784 | + | G | A/G | single | intron | 6 | 1000GENOMES,BL,BUSHMAN,GMI,MPI_MOLGEN,TISHKOFF, | 2 | 0.111468 |
SUGCT | chr7 | 40705957 | 40705958 | rs113891904 | + | G | A/G | single | intron | 4 | 1000GENOMES,BL,BUSHMAN,MPI_MOLGEN, | 2 | 0.108716 |
SUGCT | chr7 | 40706617 | 40706618 | rs67320459 | + | G | C/G | single | intron | 9 | 1000GENOMES,BGI,COMPLETE_GENOMICS,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSMP,TISHKOFF, | 2 | 0.117566 |
SUGCT | chr7 | 40706624 | 40706625 | rs73124015 | + | G | G/T | single | intron | 6 | 1000GENOMES,BL,BUSHMAN,GMI,SSMP,TISHKOFF, | 2 | 0.850000 |
SUGCT | chr7 | 40706850 | 40706852 | rs112421332 | + | TA | -/TA | deletion | intron | 6 | 1000GENOMES,BILGI_BIOE,BUSHMAN,GMI,LUNTER,SSMP, | 2 | 0.150459 |
SUGCT | chr7 | 40707332 | 40707333 | rs75592257 | + | C | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.961237 |
SUGCT | chr7 | 40708232 | 40708233 | rs6947078 | + | A | A/G | single | intron | 16 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,ILLUMINA-UK,PERLEGEN,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.666303 |
SUGCT | chr7 | 40708893 | 40708894 | rs28814329 | + | T | C/T | single | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,SSAHASNP,TISHKOFF, | 2 | 0.049541 |
SUGCT | chr7 | 40710096 | 40710097 | rs73124018 | + | G | A/G | single | intron | 4 | 1000GENOMES,GMI,SSMP,TISHKOFF, | 2 | 0.107920 |
SUGCT | chr7 | 40710267 | 40710268 | rs33997358 | + | A | A/G | single | intron | 12 | 1000GENOMES,ABI,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSMP,TISHKOFF, | 2 | 0.880713 |
SUGCT | chr7 | 40710319 | 40710320 | rs6958129 | + | A | A/G | single | intron | 18 | 1000GENOMES,ABI,AFFY,BCM_SSAHASNP,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.726902 |
SUGCT | chr7 | 40710742 | 40710743 | rs79334052 | + | C | C/T | single | intron | 6 | 1000GENOMES,BL,BUSHMAN,GMI,SSMP,TISHKOFF, | 2 | 0.850000 |
SUGCT | chr7 | 40710942 | 40710943 | rs73124020 | + | G | A/G | single | intron | 6 | 1000GENOMES,BL,BUSHMAN,GMI,SSMP,TISHKOFF, | 2 | 0.150000 |
SUGCT | chr7 | 40710965 | 40710966 | rs73124021 | + | C | C/G | single | intron | 5 | 1000GENOMES,BL,GMI,SSMP,TISHKOFF, | 2 | 0.858044 |
SUGCT | chr7 | 40711833 | 40711834 | rs116537945 | + | T | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.010453 |
SUGCT | chr7 | 40712378 | 40712379 | rs73124023 | + | C | C/T | single | intron | 7 | 1000GENOMES,BL,BUSHMAN,GMI,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.839450 |
SUGCT | chr7 | 40712782 | 40712783 | rs12701827 | + | A | A/T | single | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.876548 |
SUGCT | chr7 | 40714866 | 40714867 | rs79590460 | + | A | A/C | single | intron | 3 | 1000GENOMES,ILLUMINA-UK,TISHKOFF, | 2 | 0.983028 |
SUGCT | chr7 | 40715611 | 40715612 | rs4723973 | + | A | A/G | single | intron | 6 | 1000GENOMES,GMI,PERLEGEN,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.915086 |
SUGCT | chr7 | 40715735 | 40715736 | rs17437228 | + | G | C/G | single | intron | 6 | 1000GENOMES,BUSHMAN,GMI,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.148796 |
SUGCT | chr7 | 40715980 | 40715981 | rs13239043 | + | G | A/G | single | intron | 17 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.374448 |
SUGCT | chr7 | 40716494 | 40716495 | rs3221667 | - | T | (CA)17/18/19/20 | microsatellite | unknown | 1 | GENETHON, | 7 | 0.019000 |
SUGCT | chr7 | 40716700 | 40716701 | rs6952969 | + | A | A/G | single | intron | 20 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF, | 3 | 0.648087 |
SUGCT | chr7 | 40717225 | 40717226 | rs6957725 | + | C | C/T | single | intron | 19 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KRIBB_YJKIM,PJP,SSMP,TISHKOFF, | 2 | 0.457926 |
SUGCT | chr7 | 40717635 | 40717636 | rs74577037 | + | C | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.965592 |
SUGCT | chr7 | 40718010 | 40718011 | rs12155334 | + | T | A/T | single | intron | 7 | 1000GENOMES,BUSHMAN,GMI,PERLEGEN,SC_SNP,SSMP,TISHKOFF, | 2 | 0.155774 |
SUGCT | chr7 | 40718759 | 40718760 | rs56862916 | + | G | A/G | single | intron | 5 | 1000GENOMES,GMI,HGSV,ILLUMINA,SSMP, | 2 | 0.081625 |
SUGCT | chr7 | 40718869 | 40718870 | rs62451217 | + | T | C/T | single | intron | 10 | 1000GENOMES,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.136780 |
SUGCT | chr7 | 40718969 | 40718977 | rs141227226 | + | CAGATGAC | -/CAGATGAC | deletion | intron | 3 | 1000GENOMES,GMI,LUNTER, | 2 | 0.133609 |
SUGCT | chr7 | 40720406 | 40720407 | rs11763592 | + | A | A/G | single | intron | 9 | 1000GENOMES,ABI,BL,BUSHMAN,CSHL-HAPMAP,GMI,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.882761 |
SUGCT | chr7 | 40722440 | 40722441 | rs7808606 | + | T | C/T | single | intron | 15 | 1000GENOMES,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.323934 |
SUGCT | chr7 | 40722919 | 40722920 | rs17528214 | + | G | A/G | single | intron | 11 | 1000GENOMES,ABI,BL,BUSHMAN,ENSEMBL,GMI,HUMANGENOME_JCVI,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.160571 |
SUGCT | chr7 | 40723256 | 40723257 | rs17437429 | + | T | C/T | single | intron | 12 | 1000GENOMES,ABI,BL,BUSHMAN,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.159822 |
SUGCT | chr7 | 40723365 | 40723366 | rs76552345 | + | C | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.962979 |
SUGCT | chr7 | 40723432 | 40723433 | rs116302744 | + | A | A/C | single | intron | 1 | 1000GENOMES, | 2 | 0.989547 |
SUGCT | chr7 | 40724131 | 40724132 | rs67777497 | + | C | C/T | single | intron | 7 | 1000GENOMES,BL,ENSEMBL,GMI,HUMANGENOME_JCVI,SSMP,TISHKOFF, | 2 | 0.829514 |
SUGCT | chr7 | 40724354 | 40724355 | rs73124030 | + | G | A/G | single | intron | 5 | 1000GENOMES,BL,BUSHMAN,GMI,SSMP, | 2 | 0.165596 |
SUGCT | chr7 | 40724438 | 40724439 | rs75236379 | + | T | G/T | single | intron | 6 | 1000GENOMES,BL,BUSHMAN,GMI,SSMP,TISHKOFF, | 2 | 0.169725 |
SUGCT | chr7 | 40724997 | 40724998 | rs76287699 | + | C | C/T | single | intron | 3 | 1000GENOMES,ILLUMINA,TISHKOFF, | 2 | 0.963415 |
SUGCT | chr7 | 40725500 | 40725501 | rs75673779 | + | T | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.039634 |
SUGCT | chr7 | 40725987 | 40725988 | rs185241999 | + | A | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.983471 |
SUGCT | chr7 | 40725989 | 40725990 | rs6977432 | + | G | A/G | single | intron | 9 | 1000GENOMES,ABI,BCM_SSAHASNP,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.166667 |
SUGCT | chr7 | 40726100 | 40726101 | rs17150954 | + | T | C/T | single | intron | 6 | 1000GENOMES,AFFY,GMI,KRIBB_YJKIM,PERLEGEN,SSMP, | 2 | 0.023909 |
SUGCT | chr7 | 40726207 | 40726207 | rs11386954 | + | - | -/T | insertion | intron | 11 | 1000GENOMES,ABI,BILGI_BIOE,BL,BUSHMAN,DEVINE_LAB,GMI,HUMANGENOME_JCVI,LUNTER,PJP,SSMP, | 2 | 0.827681 |
SUGCT | chr7 | 40726212 | 40726212 | rs70990640 | + | - | -/A/T | insertion | intron | 4 | 1000GENOMES,HUMANGENOME_JCVI,PJP,TISHKOFF, | 3 | 0.859174 |
SUGCT | chr7 | 40726303 | 40726304 | rs6977963 | + | G | A/G | single | intron | 12 | 1000GENOMES,ABI,BCM_SSAHASNP,BUSHMAN,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.121996 |
SUGCT | chr7 | 40726863 | 40726864 | rs77154142 | + | C | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.983464 |
SUGCT | chr7 | 40727032 | 40727034 | rs68078005 | + | AG | -/AG | deletion | intron | 4 | 1000GENOMES,DEVINE_LAB,LUNTER,TISHKOFF, | 2 | 0.049587 |
SUGCT | chr7 | 40727222 | 40727223 | rs6965055 | + | T | G/T | single | intron | 16 | 1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SSMP,TISHKOFF, | 2 | 0.327334 |
SUGCT | chr7 | 40727242 | 40727243 | rs151102831 | + | C | C/T | single | intron | 2 | 1000GENOMES,WARNICH_LAB, | 2 | 0.986685 |
SUGCT | chr7 | 40727329 | 40727330 | rs79169001 | + | T | A/T | single | intron | 1 | 1000GENOMES, | 2 | 0.019147 |
SUGCT | chr7 | 40727428 | 40727430 | rs200897154 | + | GC | -/GC | deletion | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.013315 |
SUGCT | chr7 | 40727715 | 40727716 | rs4050983 | + | A | A/G | single | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,PERLEGEN,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.862909 |
SUGCT | chr7 | 40728562 | 40728563 | rs17171762 | + | G | G/T | single | intron | 14 | 1000GENOMES,AFFY,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.864098 |
SUGCT | chr7 | 40728609 | 40728610 | rs10486813 | + | G | G/T | single | intron | 19 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.684168 |
SUGCT | chr7 | 40728867 | 40728868 | rs10250246 | + | A | A/G | single | intron | 19 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.607234 |
SUGCT | chr7 | 40728931 | 40728932 | rs17171763 | + | A | A/G | single | intron | 16 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.682383 |
SUGCT | chr7 | 40729504 | 40729505 | rs112485573 | + | A | A/G | single | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA, | 2 | 0.983945 |
SUGCT | chr7 | 40729925 | 40729926 | rs11761250 | + | G | A/G | single | intron | 10 | 1000GENOMES,ABI,BL,BUSHMAN,CSHL-HAPMAP,GMI,PERLEGEN,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.154945 |
SUGCT | chr7 | 40730338 | 40730339 | rs11761336 | + | C | C/T | single | intron | 8 | 1000GENOMES,ABI,BUSHMAN,CSHL-HAPMAP,GMI,HUMANGENOME_JCVI,SSMP,TISHKOFF, | 2 | 0.840507 |
SUGCT | chr7 | 40730596 | 40730597 | rs4050984 | + | G | C/G | single | intron | 22 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.955460 |
SUGCT | chr7 | 40730602 | 40730603 | rs77723727 | + | T | C/T | single | intron | 3 | 1000GENOMES,ILLUMINA,TISHKOFF, | 2 | 0.037021 |
SUGCT | chr7 | 40731131 | 40731132 | rs75371340 | + | C | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.989547 |
SUGCT | chr7 | 40731260 | 40731261 | rs17171764 | + | T | C/T | single | intron | 14 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.316760 |
SUGCT | chr7 | 40731403 | 40731404 | rs35456888 | + | T | C/T | single | intron | 9 | 1000GENOMES,ABI,BL,BUSHMAN,ENSEMBL,GMI,HUMANGENOME_JCVI,SSMP,TISHKOFF, | 2 | 0.129579 |
SUGCT | chr7 | 40731577 | 40731578 | rs74721923 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.037456 |
SUGCT | chr7 | 40731693 | 40731694 | rs4119078 | - | C | A/G | single | intron | 9 | 1000GENOMES,BL,BUSHMAN,ENSEMBL,GMI,PERLEGEN,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.120451 |
SUGCT | chr7 | 40731718 | 40731719 | rs116882469 | + | A | A/G | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.984769 |
SUGCT | chr7 | 40731886 | 40731887 | rs4119077 | - | A | C/T | single | intron | 10 | 1000GENOMES,BL,BUSHMAN,ENSEMBL,GMI,HUMANGENOME_JCVI,PERLEGEN,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.120903 |
SUGCT | chr7 | 40732348 | 40732349 | rs79093570 | + | A | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.962979 |
SUGCT | chr7 | 40732357 | 40732358 | rs62451219 | + | C | A/C | single | intron | 9 | 1000GENOMES,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.131290 |
SUGCT | chr7 | 40732432 | 40732433 | rs71560199 | + | A | -/A | deletion | intron | 8 | 1000GENOMES,BILGI_BIOE,BUSHMAN,GMI,HUMANGENOME_JCVI,LUNTER,SSMP,TISHKOFF, | 2 | 0.164070 |
SUGCT | chr7 | 40732740 | 40732741 | rs17528582 | + | C | C/T | single | intron | 10 | 1000GENOMES,BL,BUSHMAN,ENSEMBL,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.879935 |
SUGCT | chr7 | 40732751 | 40732752 | rs75030838 | + | C | C/T | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.983858 |
SUGCT | chr7 | 40732841 | 40732842 | rs146699832 | + | T | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.014692 |
SUGCT | chr7 | 40732983 | 40732984 | rs74846490 | + | G | C/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.037456 |
SUGCT | chr7 | 40733200 | 40733201 | rs73310278 | + | C | C/T | single | intron | 8 | 1000GENOMES,BGI,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.853614 |
SUGCT | chr7 | 40733319 | 40733320 | rs115785171 | + | C | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.989547 |
SUGCT | chr7 | 40733755 | 40733756 | rs6462987 | + | C | C/T | single | intron | 19 | 1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.688398 |
SUGCT | chr7 | 40735393 | 40735394 | rs75820032 | + | C | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.984756 |
SUGCT | chr7 | 40736313 | 40736314 | rs17171765 | + | G | A/G | single | intron | 7 | 1000GENOMES,AFFY,BGI,GMI,KRIBB_YJKIM,PERLEGEN,SSMP, | 2 | 0.050807 |
SUGCT | chr7 | 40736951 | 40736952 | rs73310281 | + | G | A/G | single | intron | 8 | 1000GENOMES,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.140897 |
SUGCT | chr7 | 40737815 | 40737816 | rs77405430 | + | A | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.965157 |
SUGCT | chr7 | 40738575 | 40738576 | rs7800409 | + | T | A/T | single | intron | 15 | 1000GENOMES,ABI,AFFY,BL,BUSHMAN,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.159842 |
SUGCT | chr7 | 40738670 | 40738671 | rs117925837 | + | A | A/G | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.988251 |
SUGCT | chr7 | 40739282 | 40739283 | rs1811209 | + | T | C/T | single | intron | 12 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,ENSEMBL,GMI,HGSV,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.321013 |
SUGCT | chr7 | 40739284 | 40739285 | rs2011636 | + | C | C/T | single | intron | 11 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,GMI,HGSV,SC_JCM,SSMP,TSC-CSHL,WI_SSAHASNP, | 2 | 0.698347 |
SUGCT | chr7 | 40739599 | 40739599 | rs59032833 | + | - | -/T | insertion | intron | 10 | 1000GENOMES,BILGI_BIOE,BUSHMAN,DEVINE_LAB,GMI,HGSV,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 0.678899 |
SUGCT | chr7 | 40740299 | 40740300 | rs77811863 | + | T | A/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.034843 |
SUGCT | chr7 | 40740473 | 40740474 | rs80185901 | + | A | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.989547 |
SUGCT | chr7 | 40741411 | 40741412 | rs10951638 | + | A | A/G | single | intron | 18 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,PERLEGEN,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.691549 |
SUGCT | chr7 | 40742297 | 40742298 | rs74368964 | + | G | A/G | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.015302 |
SUGCT | chr7 | 40742685 | 40742686 | rs35428147 | + | A | A/G | single | intron | 8 | 1000GENOMES,ABI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HUMANGENOME_JCVI,TISHKOFF, | 2 | 0.683440 |
SUGCT | chr7 | 40742901 | 40742902 | rs117548309 | + | A | A/G | single | intron | 5 | 1000GENOMES,BL,GMI,ILLUMINA,SSMP, | 2 | 0.962576 |
SUGCT | chr7 | 40743542 | 40743543 | rs11768774 | + | C | C/T | single | intron | 13 | 1000GENOMES,ABI,AFFY,BL,BUSHMAN,CSHL-HAPMAP,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.887321 |
SUGCT | chr7 | 40743659 | 40743660 | rs142192585 | + | G | C/G | single | intron | 1 | 1000GENOMES, | 2 | 0.013315 |
SUGCT | chr7 | 40743713 | 40743714 | rs75961150 | + | T | A/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.041812 |
SUGCT | chr7 | 40743810 | 40743811 | rs11772576 | + | T | C/T | single | intron | 9 | 1000GENOMES,ABI,BUSHMAN,CSHL-HAPMAP,GMI,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.155265 |
SUGCT | chr7 | 40744673 | 40744674 | rs7812176 | + | G | A/G | single | intron | 11 | 1000GENOMES,ABI,BUSHMAN,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.171665 |
SUGCT | chr7 | 40745121 | 40745121 | rs11464136 | + | - | -/T | insertion | intron | 11 | 1000GENOMES,ABI,BILGI_BIOE,BUSHMAN,DEVINE_LAB,GMI,HGSV,HUMANGENOME_JCVI,LUNTER,PJP,TISHKOFF, | 2 | 0.672319 |
SUGCT | chr7 | 40745655 | 40745656 | rs76759290 | + | G | C/G | single | intron | 4 | 1000GENOMES,BUSHMAN,SSMP,TISHKOFF, | 2 | 0.027523 |
SUGCT | chr7 | 40745716 | 40745721 | rs111253075 | + | TATTC | -/TATTC | deletion | intron | 4 | 1000GENOMES,BUSHMAN,LUNTER,SSMP, | 2 | 0.025688 |
SUGCT | chr7 | 40745749 | 40745750 | rs13235741 | + | A | A/G | single | intron | 12 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,PJP,SSAHASNP,SSMP, | 2 | 0.670938 |
SUGCT | chr7 | 40745870 | 40745871 | rs138461504 | + | C | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.968779 |
SUGCT | chr7 | 40748297 | 40748298 | rs79307225 | + | C | C/T | single | intron | 3 | 1000GENOMES,ILLUMINA,TISHKOFF, | 2 | 0.973432 |
SUGCT | chr7 | 40748649 | 40748650 | rs1203739 | + | A | A/G | single | intron | 24 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 2 | 0.447700 |
SUGCT | chr7 | 40748725 | 40748726 | rs76148287 | + | G | A/G | single | intron | 4 | 1000GENOMES,BGI,GMI,SSMP, | 2 | 0.015666 |
SUGCT | chr7 | 40749193 | 40749194 | rs6959899 | + | T | A/T | single | intron | 12 | 1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.160714 |
SUGCT | chr7 | 40749508 | 40749509 | rs75248801 | + | G | G/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.962979 |
SUGCT | chr7 | 40749752 | 40749753 | rs6978898 | + | G | C/G | single | intron | 16 | 1000GENOMES,AFFY,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.318203 |
SUGCT | chr7 | 40750918 | 40750919 | rs57655172 | + | G | A/G | single | intron | 7 | 1000GENOMES,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,SSMP,TISHKOFF, | 2 | 0.130495 |
SUGCT | chr7 | 40751165 | 40751166 | rs115975670 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.013937 |
SUGCT | chr7 | 40751242 | 40751243 | rs79755844 | + | T | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.020017 |
SUGCT | chr7 | 40751396 | 40751397 | rs17438052 | + | T | C/T | single | intron | 11 | 1000GENOMES,ABI,AFFY,BUSHMAN,ENSEMBL,GMI,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.159664 |
SUGCT | chr7 | 40751909 | 40751910 | rs78714799 | + | C | C/T | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.981723 |
SUGCT | chr7 | 40752058 | 40752059 | rs79179470 | + | G | A/G | single | intron | 3 | 1000GENOMES,SSMP,TISHKOFF, | 2 | 0.040505 |
SUGCT | chr7 | 40752365 | 40752366 | rs6956181 | + | C | C/G | single | intron | 12 | 1000GENOMES,ABI,BCM_SSAHASNP,BL,BUSHMAN,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.884467 |
SUGCT | chr7 | 40753430 | 40753431 | rs1203725 | - | T | A/G | single | intron | 18 | 1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.756484 |
SUGCT | chr7 | 40753625 | 40753626 | rs1203726 | + | T | C/T | single | intron | 16 | 1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,KWOK,PERLEGEN,SC_JCM,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.222174 |
SUGCT | chr7 | 40753820 | 40753821 | rs79946515 | + | T | C/T | single | intron | 2 | ENSEMBL,GMI, | 2 | 0.600000 |
SUGCT | chr7 | 40754014 | 40754015 | rs11760535 | + | C | C/T | single | intron | 9 | 1000GENOMES,ABI,BL,BUSHMAN,CSHL-HAPMAP,GMI,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.887956 |
SUGCT | chr7 | 40754075 | 40754075 | rs143764089 | + | - | -/T | insertion | intron | 3 | 1000GENOMES,LUNTER,TISHKOFF, | 2 | 0.967401 |
SUGCT | chr7 | 40754947 | 40754948 | rs1203727 | + | C | C/T | single | intron | 20 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.627853 |
SUGCT | chr7 | 40755145 | 40755146 | rs1203728 | + | C | C/T | single | intron | 18 | 1000GENOMES,ABI,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.612062 |
SUGCT | chr7 | 40755528 | 40755529 | rs78852679 | + | C | C/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.962979 |
SUGCT | chr7 | 40755725 | 40755726 | rs1203729 | + | A | A/G | single | intron | 8 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,HGSV,ILLUMINA,KWOK,SC_JCM,TISHKOFF, | 2 | 0.943197 |
SUGCT | chr7 | 40755977 | 40755978 | rs1203730 | + | C | C/G | single | intron | 18 | 1000GENOMES,AFFY,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.793296 |
SUGCT | chr7 | 40756494 | 40756495 | rs1146039 | + | A | A/G | single | intron | 8 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,HGSV,KWOK,SC_JCM,TISHKOFF,TSC-CSHL, | 2 | 0.940430 |
SUGCT | chr7 | 40756898 | 40756899 | rs1921750 | - | T | A/G/T | single | intron | 13 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA-UK,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.869167 |
SUGCT | chr7 | 40756922 | 40756923 | rs1203731 | + | C | C/T | single | intron | 21 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KWOK,PJP,SC_JCM,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.478911 |
SUGCT | chr7 | 40757017 | 40757018 | rs6462988 | + | G | C/G | single | intron | 10 | 1000GENOMES,BCM_SSAHASNP,BL,BUSHMAN,GMI,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.113544 |
SUGCT | chr7 | 40757492 | 40757493 | rs34381290 | + | A | A/G | single | intron | 6 | 1000GENOMES,ABI,ENSEMBL,HUMANGENOME_JCVI,PJP,SSMP, | 2 | 0.954629 |
SUGCT | chr7 | 40757521 | 40757523 | rs10585325 | + | CC | -/CC | deletion | intron | 3 | 1000GENOMES,BILGI_BIOE,DEVINE_LAB, | 2 | 0.128099 |
SUGCT | chr7 | 40757522 | 40757523 | rs181346454 | + | C | C/T | single | intron | 2 | 1000GENOMES,GMI, | 2 | 0.917815 |
SUGCT | chr7 | 40757666 | 40757667 | rs1146040 | + | G | A/G | single | intron | 19 | 1000GENOMES,ABI,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KWOK,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.352234 |
SUGCT | chr7 | 40757692 | 40757693 | rs7779570 | + | G | A/G | single | intron | 11 | 1000GENOMES,ABI,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.127527 |
SUGCT | chr7 | 40757890 | 40757891 | rs1203732 | + | C | C/T | single | intron | 5 | 1000GENOMES,HGSV,KWOK,SC_JCM,TISHKOFF, | 2 | 0.953712 |
SUGCT | chr7 | 40758140 | 40758141 | rs1203733 | - | T | A/C | single | intron | 22 | 1000GENOMES,AFFY,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.669063 |
SUGCT | chr7 | 40758199 | 40758200 | rs1203734 | - | T | A/C | single | intron | 23 | 1000GENOMES,AFFY,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.630402 |
SUGCT | chr7 | 40759349 | 40759350 | rs115091780 | + | C | C/T | single | intron | 3 | 1000GENOMES,ILLUMINA,TISHKOFF, | 2 | 0.961237 |
SUGCT | chr7 | 40759669 | 40759670 | rs11760481 | + | G | C/G | single | intron | 8 | 1000GENOMES,ABI,BL,CSHL-HAPMAP,GMI,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.081954 |
SUGCT | chr7 | 40759729 | 40759730 | rs1203735 | + | T | A/T | single | intron | 13 | 1000GENOMES,AFFY,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,SC_JCM,SSMP,TISHKOFF, | 2 | 0.185762 |
SUGCT | chr7 | 40760386 | 40760387 | rs2009693 | + | C | C/T | single | intron | 14 | 1000GENOMES,ABI,AFFY,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.864462 |
SUGCT | chr7 | 40760497 | 40760498 | rs735303 | + | A | A/G | single | intron | 20 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.585861 |
SUGCT | chr7 | 40760505 | 40760506 | rs35421759 | + | A | A/T | single | intron | 8 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,ENSEMBL,GMI,HUMANGENOME_JCVI,SSMP, | 2 | 0.845238 |
SUGCT | chr7 | 40760814 | 40760814 | rs200146932 | + | - | -/T | insertion | intron | 1 | 1000GENOMES, | 2 | 0.989899 |
SUGCT | chr7 | 40760873 | 40760874 | rs1921744 | - | G | C/T | single | intron | 14 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TSC-CSHL, | 2 | 0.859886 |
SUGCT | chr7 | 40761142 | 40761143 | rs17171768 | + | C | C/G | single | intron | 9 | 1000GENOMES,BGI,COMPLETE_GENOMICS,GMI,ILLUMINA,ILLUMINA-UK,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.862874 |
SUGCT | chr7 | 40761664 | 40761665 | rs79667895 | + | A | A/C | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.972997 |
SUGCT | chr7 | 40762715 | 40762716 | rs78632363 | + | G | A/G | single | intron | 3 | 1000GENOMES,ILLUMINA,TISHKOFF, | 2 | 0.027439 |
SUGCT | chr7 | 40762923 | 40762924 | rs73310294 | + | A | A/T | single | intron | 7 | 1000GENOMES,BGI,COMPLETE_GENOMICS,GMI,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.861595 |
SUGCT | chr7 | 40763887 | 40763888 | rs116126059 | + | C | A/C | single | intron | 1 | 1000GENOMES, | 2 | 0.011938 |
SUGCT | chr7 | 40764029 | 40764030 | rs183876875 | + | C | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.988062 |
SUGCT | chr7 | 40764078 | 40764079 | rs1203714 | + | A | A/G | single | intron | 16 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,HUMANGENOME_JCVI,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.640897 |
SUGCT | chr7 | 40764172 | 40764173 | rs1203715 | + | C | C/G | single | intron | 13 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,KWOK,PJP,SC_JCM,SSMP, | 2 | 0.611366 |
SUGCT | chr7 | 40764741 | 40764742 | rs201989334 | + | T | -/T | deletion | intron | 1 | 1000GENOMES, | 2 | 0.011938 |
SUGCT | chr7 | 40764744 | 40764744 | rs202086084 | + | - | -/T | insertion | intron | 1 | 1000GENOMES, | 2 | 0.988062 |
SUGCT | chr7 | 40764994 | 40764995 | rs1146041 | + | C | C/T | single | intron | 19 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA-UK,KWOK,PERLEGEN,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 3 | 0.525923 |
SUGCT | chr7 | 40765093 | 40765093 | rs113833078 | + | - | -/G | insertion | intron | 4 | 1000GENOMES,BUSHMAN,LUNTER,TISHKOFF, | 2 | 0.937615 |
SUGCT | chr7 | 40765210 | 40765211 | rs142322545 | + | T | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.010560 |
SUGCT | chr7 | 40765763 | 40765764 | rs1203716 | + | G | A/G | single | intron | 21 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.402738 |
SUGCT | chr7 | 40765912 | 40765913 | rs201569813 | + | A | -/A | deletion | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.011938 |
SUGCT | chr7 | 40765987 | 40765988 | rs116009541 | + | A | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.986498 |
SUGCT | chr7 | 40766140 | 40766141 | rs1203717 | + | T | G/T | single | intron | 17 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA-UK,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.398924 |
SUGCT | chr7 | 40766448 | 40766449 | rs11767100 | + | G | A/G | single | intron | 16 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BL,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.135972 |
SUGCT | chr7 | 40766523 | 40766524 | rs75497253 | + | G | A/G | single | intron | 3 | 1000GENOMES,ILLUMINA,TISHKOFF, | 2 | 0.013502 |
SUGCT | chr7 | 40766614 | 40766615 | rs1203718 | + | T | C/T | single | intron | 22 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.411072 |
SUGCT | chr7 | 40766921 | 40766922 | rs79183465 | + | T | A/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.013937 |
SUGCT | chr7 | 40766966 | 40766967 | rs76482225 | + | C | A/C | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.024390 |
SUGCT | chr7 | 40767138 | 40767139 | rs113998530 | + | A | A/G | single | intron | 3 | 1000GENOMES,ILLUMINA,TISHKOFF, | 2 | 0.986063 |
SUGCT | chr7 | 40767335 | 40767336 | rs114747385 | + | G | G/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.986063 |
SUGCT | chr7 | 40767350 | 40767351 | rs114142655 | + | A | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.986063 |
SUGCT | chr7 | 40767364 | 40767365 | rs76150672 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.014808 |
SUGCT | chr7 | 40767757 | 40767758 | rs77731511 | + | C | A/C | single | intron | 1 | 1000GENOMES, | 2 | 0.018728 |
SUGCT | chr7 | 40767980 | 40767981 | rs143495460 | + | A | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.985767 |
SUGCT | chr7 | 40768738 | 40768739 | rs76213952 | + | A | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.975610 |
SUGCT | chr7 | 40768798 | 40768799 | rs115552040 | + | T | A/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.010889 |
SUGCT | chr7 | 40769348 | 40769349 | rs117077747 | + | C | C/T | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.985205 |
SUGCT | chr7 | 40769643 | 40769644 | rs75644320 | + | G | G/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.986063 |
SUGCT | chr7 | 40769679 | 40769680 | rs1203719 | + | T | C/T | single | intron | 8 | 1000GENOMES,AFFY,BUSHMAN,COMPLETE_GENOMICS,HGSV,KRIBB_YJKIM,KWOK,TISHKOFF, | 2 | 0.088901 |
SUGCT | chr7 | 40769870 | 40769871 | rs144902279 | + | A | A/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.987603 |
SUGCT | chr7 | 40769907 | 40769908 | rs151311852 | + | G | C/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.012397 |
SUGCT | chr7 | 40770023 | 40770024 | rs7790459 | + | A | A/T | single | intron | 10 | 1000GENOMES,ABI,BGI,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,ILLUMINA-UK,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.868011 |
SUGCT | chr7 | 40770207 | 40770208 | rs80143259 | + | A | A/G | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.979983 |
SUGCT | chr7 | 40770220 | 40770221 | rs115522550 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.013937 |
SUGCT | chr7 | 40770477 | 40770478 | rs74575621 | + | A | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.975610 |
SUGCT | chr7 | 40771064 | 40771065 | rs75745165 | + | C | C/T | single | intron | 3 | 1000GENOMES,ILLUMINA,TISHKOFF, | 2 | 0.975610 |
SUGCT | chr7 | 40771594 | 40771595 | rs1203720 | + | A | A/G | single | intron | 20 | 1000GENOMES,ABI,AFFY,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.749188 |
SUGCT | chr7 | 40772028 | 40772029 | rs144624897 | + | G | G/T | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.981175 |
SUGCT | chr7 | 40772047 | 40772048 | rs62449364 | + | T | G/T | single | intron | 5 | 1000GENOMES,BCMHGSC_JDW,BL,ILLUMINA,SSMP, | 2 | 0.123344 |
SUGCT | chr7 | 40772142 | 40772143 | rs78797812 | + | A | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.986063 |
SUGCT | chr7 | 40772245 | 40772246 | rs79724241 | + | C | C/T | single | intron | 3 | 1000GENOMES,BCM-HGSC-SUB,ILLUMINA, | 2 | 0.971279 |
SUGCT | chr7 | 40772440 | 40772441 | rs138517129 | + | C | C/T | single | intron | 3 | 1000GENOMES,SSMP,TISHKOFF, | 2 | 0.973829 |
SUGCT | chr7 | 40772452 | 40772453 | rs11767740 | + | C | C/T | single | intron | 6 | 1000GENOMES,ABI,CSHL-HAPMAP,GMI,SSMP,TISHKOFF, | 2 | 0.974747 |
SUGCT | chr7 | 40772524 | 40772525 | rs59353296 | + | C | C/T | single | intron | 8 | 1000GENOMES,BGI,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.874885 |
SUGCT | chr7 | 40772553 | 40772554 | rs148036302 | + | A | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.979339 |
SUGCT | chr7 | 40772822 | 40772823 | rs116502420 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.013937 |
SUGCT | chr7 | 40772827 | 40772828 | rs116375053 | + | A | A/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.986063 |
SUGCT | chr7 | 40772840 | 40772842 | rs144083060 | + | TA | -/TA | deletion | intron | 3 | 1000GENOMES,LUNTER,TISHKOFF, | 2 | 0.020661 |
SUGCT | chr7 | 40773478 | 40773479 | rs75120722 | + | T | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.013502 |
SUGCT | chr7 | 40773590 | 40773591 | rs1203721 | - | A | A/T | single | intron | 22 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KWOK,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 3 | 0.395131 |
SUGCT | chr7 | 40773603 | 40773604 | rs1203722 | + | T | C/T | single | intron | 11 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ILLUMINA,KRIBB_YJKIM,KWOK,SC_JCM,SSMP,TISHKOFF, | 2 | 0.123699 |
SUGCT | chr7 | 40773792 | 40773793 | rs74575814 | + | G | G/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.986498 |
SUGCT | chr7 | 40774304 | 40774305 | rs1203723 | - | T | A/T | single | intron | 8 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,KWOK,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.909685 |
SUGCT | chr7 | 40774308 | 40774309 | rs76504940 | + | T | C/T | single | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA, | 2 | 0.015138 |
SUGCT | chr7 | 40774593 | 40774594 | rs77716228 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.024390 |
SUGCT | chr7 | 40774898 | 40774899 | rs78489901 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.013502 |
SUGCT | chr7 | 40774936 | 40774937 | rs74455554 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.024390 |
SUGCT | chr7 | 40775274 | 40775275 | rs115878864 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.013502 |
SUGCT | chr7 | 40775688 | 40775690 | rs201985179 | + | AC | -/AC | deletion | intron | 1 | 1000GENOMES, | 2 | 0.039027 |
SUGCT | chr7 | 40775715 | 40775716 | rs79020774 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.024390 |
SUGCT | chr7 | 40775859 | 40775860 | rs7800337 | + | T | A/T | single | intron | 3 | 1000GENOMES,GMI,WI_SSAHASNP, | 2 | 0.195822 |
SUGCT | chr7 | 40775860 | 40775864 | rs200257847 | + | TCAA | -/TCAA | deletion | intron | 2 | 1000GENOMES,BILGI_BIOE, | 2 | 0.085859 |
SUGCT | chr7 | 40775990 | 40775991 | rs35805691 | + | G | A/G | single | intron | 5 | 1000GENOMES,ABI,ENSEMBL,GMI,SSMP, | 2 | 0.137156 |
SUGCT | chr7 | 40776427 | 40776428 | rs1203724 | + | G | G/T | single | intron | 20 | 1000GENOMES,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KWOK,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 3 | 0.610478 |
SUGCT | chr7 | 40777545 | 40777546 | rs116375641 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.021341 |
SUGCT | chr7 | 40777551 | 40777552 | rs115615211 | + | A | A/G | single | intron | 3 | 1000GENOMES,SSMP,TISHKOFF, | 2 | 0.962979 |
SUGCT | chr7 | 40777626 | 40777627 | rs142971254 | + | C | A/C | single | intron | 1 | 1000GENOMES, | 2 | 0.010560 |
SUGCT | chr7 | 40777904 | 40777905 | rs77811342 | + | A | A/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.986498 |
SUGCT | chr7 | 40778230 | 40778231 | rs115127090 | + | C | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.987369 |
SUGCT | chr7 | 40778831 | 40778832 | rs12701828 | + | C | A/C | single | intron | 10 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP, | 2 | 0.129715 |
SUGCT | chr7 | 40779225 | 40779226 | rs73312207 | + | C | C/T | single | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA-UK, | 2 | 0.988543 |
SUGCT | chr7 | 40780139 | 40780140 | rs12701829 | + | T | C/T | single | intron | 8 | 1000GENOMES,ABI,BL,GMI,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP, | 2 | 0.150459 |
SUGCT | chr7 | 40781133 | 40781134 | rs78292445 | + | G | A/G | single | intron | 6 | 1000GENOMES,BL,GMI,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.030026 |
SUGCT | chr7 | 40781393 | 40781394 | rs76287267 | + | A | A/G | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.976066 |
SUGCT | chr7 | 40781495 | 40781496 | rs116282987 | + | A | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.987603 |
SUGCT | chr7 | 40782023 | 40782024 | rs3857748 | + | A | A/G | single | intron | 14 | 1000GENOMES,ABI,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,ILLUMINA-UK,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.478082 |
SUGCT | chr7 | 40782421 | 40782422 | rs17171773 | + | C | C/T | single | intron | 6 | 1000GENOMES,AFFY,GMI,KRIBB_YJKIM,PERLEGEN,SSMP, | 2 | 0.979280 |
SUGCT | chr7 | 40782571 | 40782572 | rs10499617 | + | T | C/T | single | intron | 10 | 1000GENOMES,ABI,AFFY,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.066047 |
SUGCT | chr7 | 40783023 | 40783024 | rs114385327 | + | C | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.975174 |
SUGCT | chr7 | 40783072 | 40783073 | rs80271582 | + | G | C/G | single | intron | 3 | 1000GENOMES,BL,SSMP, | 2 | 0.037859 |
SUGCT | chr7 | 40783175 | 40783176 | rs4720372 | + | T | G/T | single | intron | 7 | 1000GENOMES,ABI,BGI,CSHL-HAPMAP,GMI,SSMP,WI_SSAHASNP, | 2 | 0.035027 |
SUGCT | chr7 | 40783532 | 40783533 | rs4723975 | + | A | A/T | single | intron | 9 | 1000GENOMES,ABI,BGI,CSHL-HAPMAP,GMI,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.951737 |
SUGCT | chr7 | 40783623 | 40783624 | rs7794957 | + | G | A/G | single | intron | 8 | 1000GENOMES,ABI,CSHL-HAPMAP,GMI,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.050964 |
SUGCT | chr7 | 40783806 | 40783807 | rs7795257 | + | G | A/G | single | intron | 6 | 1000GENOMES,ABI,BUSHMAN,CSHL-HAPMAP,PJP,WI_SSAHASNP, | 2 | 0.011927 |
SUGCT | chr7 | 40783905 | 40783906 | rs7781779 | + | T | C/T | single | intron | 11 | 1000GENOMES,ABI,BGI,BUSHMAN,CSHL-HAPMAP,GMI,ILLUMINA,PERLEGEN,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.046512 |
SUGCT | chr7 | 40785316 | 40785317 | rs10229743 | + | G | A/G | single | intron | 4 | 1000GENOMES,ILLUMINA,PERLEGEN,WUGSC_SSAHASNP, | 2 | 0.013781 |
SUGCT | chr7 | 40786249 | 40786249 | rs147436292 | + | - | -/A | insertion | intron | 2 | 1000GENOMES,LUNTER, | 2 | 0.980257 |
SUGCT | chr7 | 40786931 | 40786932 | rs7778021 | + | C | C/T | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.637900 |
SUGCT | chr7 | 40787103 | 40787104 | rs17438725 | + | T | C/T | single | intron | 7 | 1000GENOMES,AFFY,GMI,HGSV,ILLUMINA,PERLEGEN,SSMP, | 2 | 0.067320 |
SUGCT | chr7 | 40787383 | 40787383 | rs200244015 | + | - | -/T | insertion | intron | 1 | 1000GENOMES, | 2 | 0.989899 |
SUGCT | chr7 | 40787864 | 40787865 | rs77788648 | + | G | A/G | single | intron | 4 | 1000GENOMES,BGI,GMI,SSMP, | 2 | 0.028285 |
SUGCT | chr7 | 40788080 | 40788081 | rs56243010 | + | A | A/G | single | intron | 4 | 1000GENOMES,GMI,HGSV,SSMP, | 2 | 0.932571 |
SUGCT | chr7 | 40788313 | 40788314 | rs144916205 | + | T | C/T | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.015151 |
SUGCT | chr7 | 40788746 | 40788747 | rs12532716 | + | T | C/T | single | intron | 7 | 1000GENOMES,ABI,BGI,CSHL-HAPMAP,GMI,PERLEGEN,SSMP, | 2 | 0.036670 |
SUGCT | chr7 | 40788804 | 40788805 | rs12667729 | + | T | C/T | single | intron | 9 | 1000GENOMES,AFFY,CSHL-HAPMAP,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.041547 |
SUGCT | chr7 | 40789893 | 40789894 | rs10228025 | + | G | A/G | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.380554 |
SUGCT | chr7 | 40790256 | 40790257 | rs6970061 | + | A | A/G | single | intron | 15 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCM_SSAHASNP,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.628292 |
SUGCT | chr7 | 40790381 | 40790382 | rs6970230 | + | A | A/G | single | intron | 11 | 1000GENOMES,BCM_SSAHASNP,BL,BUSHMAN,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.878230 |
SUGCT | chr7 | 40791539 | 40791540 | rs17171774 | + | C | C/G | single | intron | 14 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PERLEGEN,PJP,SSMP,TISHKOFF, | 3 | 0.449293 |
SUGCT | chr7 | 40791859 | 40791860 | rs78580930 | + | T | G/T | single | intron | 4 | 1000GENOMES,BGI,GMI,SSMP, | 2 | 0.037190 |
SUGCT | chr7 | 40791883 | 40791884 | rs59480061 | + | T | A/T | single | intron | 4 | 1000GENOMES,HGSV,ILLUMINA-UK,TISHKOFF, | 2 | 0.011468 |
SUGCT | chr7 | 40792003 | 40792004 | rs10265533 | + | A | A/G | single | intron | 16 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,PJP,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.451097 |
SUGCT | chr7 | 40793090 | 40793091 | rs10240804 | + | G | A/G | single | intron | 10 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.311070 |
SUGCT | chr7 | 40793557 | 40793558 | rs3857749 | + | G | A/G | single | intron | 19 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.544440 |
SUGCT | chr7 | 40793695 | 40793696 | rs3857750 | + | G | A/G | single | intron | 19 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PERLEGEN,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.536109 |
SUGCT | chr7 | 40793719 | 40793720 | rs6948947 | + | A | A/G | single | intron | 6 | 1000GENOMES,BCM_SSAHASNP,GMI,HGSV,ILLUMINA,SSMP, | 2 | 0.934565 |
SUGCT | chr7 | 40794524 | 40794525 | rs4723977 | + | A | A/T | single | intron | 17 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PERLEGEN,PJP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.468750 |
SUGCT | chr7 | 40795111 | 40795112 | rs17529882 | + | A | A/G | single | intron | 6 | 1000GENOMES,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP, | 2 | 0.933814 |
SUGCT | chr7 | 40795199 | 40795200 | rs17439106 | + | A | A/G | single | intron | 4 | 1000GENOMES,GMI,PERLEGEN,SSMP, | 2 | 0.933528 |
SUGCT | chr7 | 40796469 | 40796470 | rs12701830 | + | A | A/T | single | intron | 16 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.466545 |
SUGCT | chr7 | 40796617 | 40796618 | rs1921752 | + | G | A/G | single | intron | 19 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,EXOME_CHIP,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.528100 |
SUGCT | chr7 | 40796625 | 40796626 | rs76104208 | + | A | A/G | single | intron | 4 | 1000GENOMES,BGI,GMI,SSMP, | 2 | 0.962810 |
SUGCT | chr7 | 40796735 | 40796736 | rs766317 | + | G | A/G | single | intron | 17 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.551020 |
SUGCT | chr7 | 40796888 | 40796889 | rs73125725 | + | G | A/G | single | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA,SSMP, | 2 | 0.021540 |
SUGCT | chr7 | 40797218 | 40797219 | rs7802357 | + | C | C/T | single | intron | 14 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,PERLEGEN,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.462597 |
SUGCT | chr7 | 40797447 | 40797448 | rs7802894 | + | G | A/G | single | intron | 11 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.307516 |
SUGCT | chr7 | 40798034 | 40798035 | rs77041507 | + | A | A/T | single | intron | 4 | 1000GENOMES,BGI,GMI,SSMP, | 2 | 0.961706 |
SUGCT | chr7 | 40798097 | 40798098 | rs17171779 | + | T | C/T | single | intron | 5 | 1000GENOMES,BGI,GMI,PERLEGEN,SSMP, | 2 | 0.037565 |
SUGCT | chr7 | 40798148 | 40798149 | rs11981180 | + | A | A/G | single | intron | 9 | 1000GENOMES,AFFY,BGI,CSHL-HAPMAP,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP, | 2 | 0.959249 |
SUGCT | chr7 | 40798266 | 40798267 | rs976829 | + | C | C/T | single | intron | 21 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KWOK,PJP,SC_JCM,SC_SNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.010483 |
SUGCT | chr7 | 40798625 | 40798626 | rs79207887 | + | G | G/T | single | intron | 4 | 1000GENOMES,BL,ILLUMINA,SSMP, | 2 | 0.963990 |
SUGCT | chr7 | 40799171 | 40799172 | rs28521430 | + | G | A/G | single | intron | 13 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,PJP,SSAHASNP,SSMP, | 2 | 0.540219 |
SUGCT | chr7 | 40799176 | 40799177 | rs77874948 | + | C | C/T | single | intron | 4 | 1000GENOMES,BGI,GMI,SSMP, | 2 | 0.962576 |
SUGCT | chr7 | 40799889 | 40799890 | rs75081397 | + | T | C/T | single | intron | 3 | 1000GENOMES,BL,SSMP, | 2 | 0.038907 |
SUGCT | chr7 | 40800051 | 40800052 | rs1203736 | + | C | A/C/G | single | intron | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 3 | 0.000912 |
SUGCT | chr7 | 40800495 | 40800496 | rs78944381 | + | C | C/T | single | intron | 4 | 1000GENOMES,BL,ILLUMINA,SSMP, | 2 | 0.959023 |
SUGCT | chr7 | 40801002 | 40801003 | rs12540647 | + | A | A/G | single | intron | 6 | 1000GENOMES,ABI,BGI,CSHL-HAPMAP,GMI,SSMP, | 2 | 0.963269 |
SUGCT | chr7 | 40801430 | 40801431 | rs12540736 | + | A | A/G | single | intron | 6 | 1000GENOMES,ABI,BGI,CSHL-HAPMAP,GMI,SSMP, | 2 | 0.962576 |
SUGCT | chr7 | 40801476 | 40801477 | rs12538260 | + | T | C/T | single | intron | 7 | 1000GENOMES,ABI,BGI,CSHL-HAPMAP,GMI,ILLUMINA,SSMP, | 2 | 0.033074 |
SUGCT | chr7 | 40801626 | 40801627 | rs77229410 | + | G | A/G | single | intron | 4 | 1000GENOMES,BGI,GMI,SSMP, | 2 | 0.039600 |
SUGCT | chr7 | 40801871 | 40801872 | rs7796990 | + | G | A/G | single | intron | 16 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.490246 |
SUGCT | chr7 | 40801951 | 40801952 | rs143689207 | + | G | A/G | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.012856 |
SUGCT | chr7 | 40802191 | 40802192 | rs17171781 | + | T | C/T | single | intron | 5 | 1000GENOMES,BGI,GMI,PERLEGEN,SSMP, | 2 | 0.035993 |
SUGCT | chr7 | 40802467 | 40802468 | rs140468682 | + | C | C/G | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.962351 |
SUGCT | chr7 | 40802736 | 40802737 | rs73125727 | + | T | G/T | single | intron | 3 | 1000GENOMES,GMI,ILLUMINA, | 2 | 0.032637 |
SUGCT | chr7 | 40802859 | 40802860 | rs74338147 | + | A | A/G | single | intron | 6 | 1000GENOMES,BUSHMAN,GMI,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.883027 |
SUGCT | chr7 | 40802869 | 40802870 | rs12531154 | + | A | A/G | single | intron | 5 | 1000GENOMES,BGI,CSHL-HAPMAP,GMI,SSMP, | 2 | 0.965611 |
SUGCT | chr7 | 40803498 | 40803499 | rs76696531 | + | A | A/G | single | intron | 4 | 1000GENOMES,BGI,GMI,SSMP, | 2 | 0.962141 |
SUGCT | chr7 | 40803535 | 40803536 | rs10486815 | + | T | C/T | single | intron | 6 | 1000GENOMES,AFFY,BGI,GMI,PERLEGEN,SSMP, | 2 | 0.034908 |
SUGCT | chr7 | 40804062 | 40804063 | rs76236638 | + | A | A/T | single | intron | 4 | 1000GENOMES,BGI,GMI,SSMP, | 2 | 0.962576 |
SUGCT | chr7 | 40804234 | 40804235 | rs79730736 | + | G | A/G | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.068709 |
SUGCT | chr7 | 40804311 | 40804312 | rs77597943 | + | T | C/T | single | intron | 4 | 1000GENOMES,BGI,GMI,SSMP, | 2 | 0.037424 |
SUGCT | chr7 | 40804394 | 40804395 | rs1203737 | + | C | C/G | single | intron | 20 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,KWOK,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.375912 |
SUGCT | chr7 | 40804487 | 40804488 | rs4050962 | + | G | G/T | single | intron | 16 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 2 | 0.602740 |
SUGCT | chr7 | 40804588 | 40804589 | rs111363565 | + | A | A/G | single | intron | 4 | 1000GENOMES,BUSHMAN,ILLUMINA,TISHKOFF, | 2 | 0.985321 |
SUGCT | chr7 | 40805202 | 40805203 | rs4720373 | + | A | A/T | single | intron | 16 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.449407 |
SUGCT | chr7 | 40805314 | 40805315 | rs62449365 | + | C | C/T | single | intron | 8 | 1000GENOMES,BCMHGSC_JDW,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,SSMP, | 2 | 0.729853 |
SUGCT | chr7 | 40805696 | 40805697 | rs12538533 | + | C | C/T | single | intron | 17 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PJP,SSMP,TISHKOFF, | 2 | 0.463977 |
SUGCT | chr7 | 40805787 | 40805788 | rs137913499 | + | A | A/T | single | intron | 1 | 1000GENOMES, | 2 | 0.989899 |
SUGCT | chr7 | 40806018 | 40806019 | rs12539159 | + | G | C/G | single | intron | 5 | 1000GENOMES,ABI,CSHL-HAPMAP,GMI,SSMP, | 2 | 0.036731 |
SUGCT | chr7 | 40806036 | 40806037 | rs148699381 | + | G | C/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.017447 |
SUGCT | chr7 | 40806508 | 40806509 | rs17171782 | + | A | A/G | single | intron | 5 | 1000GENOMES,BGI,GMI,PERLEGEN,SSMP, | 2 | 0.964193 |
SUGCT | chr7 | 40806593 | 40806594 | rs80302463 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.029181 |
SUGCT | chr7 | 40807457 | 40807458 | rs13242768 | + | A | A/G | single | intron | 12 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,COMPLETE_GENOMICS,ENSEMBL,GMI,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF, | 3 | 0.614932 |
SUGCT | chr7 | 40807462 | 40807463 | rs12534713 | + | A | A/G | single | intron | 6 | 1000GENOMES,ABI,BGI,CSHL-HAPMAP,GMI,SSMP, | 2 | 0.963011 |
SUGCT | chr7 | 40807508 | 40807508 | rs34639624 | + | - | -/T | insertion | intron | 3 | 1000GENOMES,ABI,LUNTER, | 2 | 0.958219 |
SUGCT | chr7 | 40807539 | 40807540 | rs12534734 | + | A | A/G | single | intron | 6 | 1000GENOMES,ABI,BGI,CSHL-HAPMAP,GMI,SSMP, | 2 | 0.966511 |
SUGCT | chr7 | 40808517 | 40808518 | rs74642859 | + | G | A/G | single | intron | 3 | 1000GENOMES,BCM-HGSC-SUB,ILLUMINA, | 2 | 0.044386 |
SUGCT | chr7 | 40809142 | 40809143 | rs2876978 | + | G | A/G | single | intron | 19 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.537721 |
SUGCT | chr7 | 40809286 | 40809287 | rs78100575 | + | A | A/G | single | intron | 3 | 1000GENOMES,BL,SSMP, | 2 | 0.963162 |
SUGCT | chr7 | 40809687 | 40809688 | rs77137181 | + | A | A/C | single | intron | 4 | 1000GENOMES,BGI,GMI,SSMP, | 2 | 0.962576 |
SUGCT | chr7 | 40810400 | 40810401 | rs6956585 | + | A | A/G | single | intron | 15 | 1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.452511 |
SUGCT | chr7 | 40811234 | 40811235 | rs76020617 | + | G | A/G | single | intron | 4 | 1000GENOMES,BGI,GMI,SSMP, | 2 | 0.037424 |
SUGCT | chr7 | 40812078 | 40812079 | rs12701832 | + | T | C/T | single | intron | 14 | 1000GENOMES,BGI,BL,BUSHMAN,CSHL-HAPMAP,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.269424 |
SUGCT | chr7 | 40812158 | 40812159 | rs117512853 | + | A | A/C | single | intron | 1 | 1000GENOMES, | 2 | 0.989991 |
SUGCT | chr7 | 40812487 | 40812488 | rs4720374 | + | T | G/T | single | intron | 7 | 1000GENOMES,ABI,BGI,CSHL-HAPMAP,GMI,PJP,WI_SSAHASNP, | 2 | 0.038729 |
SUGCT | chr7 | 40812711 | 40812712 | rs80275678 | + | T | C/T | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.072161 |
SUGCT | chr7 | 40815024 | 40815025 | rs17530165 | + | A | A/G | single | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.664190 |
SUGCT | chr7 | 40815894 | 40815895 | rs17530213 | + | G | A/G | single | intron | 12 | 1000GENOMES,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,HUMANGENOME_JCVI,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.329787 |
SUGCT | chr7 | 40815969 | 40815970 | rs116582634 | + | T | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.012631 |
SUGCT | chr7 | 40816392 | 40816393 | rs1921742 | + | C | C/G | single | intron | 3 | 1000GENOMES,SSMP,TSC-CSHL, | 2 | 0.984604 |
SUGCT | chr7 | 40816438 | 40816439 | rs4460274 | + | T | C/T | single | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,DEVINE_LAB,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.333845 |
SUGCT | chr7 | 40816464 | 40816465 | rs2329877 | + | C | C/T | single | intron | 21 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 2 | 0.551538 |
SUGCT | chr7 | 40816515 | 40816516 | rs67368543 | + | T | -/T | deletion | intron | 4 | 1000GENOMES,DEVINE_LAB,LUNTER,SSMP, | 2 | 0.046373 |
SUGCT | chr7 | 40816579 | 40816580 | rs17530234 | + | T | G/T | single | intron | 9 | 1000GENOMES,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.080735 |
SUGCT | chr7 | 40816652 | 40816653 | rs17439448 | + | C | C/T | single | intron | 8 | 1000GENOMES,BUSHMAN,GMI,ILLUMINA,ILLUMINA-UK,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.919825 |
SUGCT | chr7 | 40817061 | 40817062 | rs73125733 | + | T | A/T | single | intron | 7 | 1000GENOMES,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,SSMP, | 2 | 0.338060 |
SUGCT | chr7 | 40817571 | 40817572 | rs17439476 | + | C | C/T | single | intron | 3 | 1000GENOMES,PERLEGEN,SSMP, | 2 | 0.987786 |
SUGCT | chr7 | 40817836 | 40817836 | rs10667994 | + | - | -/TT | insertion | intron | 13 | 1000GENOMES,ABI,BGI,BILGI_BIOE,BL,BUSHMAN,DEVINE_LAB,GMI,HUMANGENOME_JCVI,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 0.523352 |
SUGCT | chr7 | 40818201 | 40818202 | rs4720375 | + | G | C/G | single | intron | 8 | 1000GENOMES,ABI,BGI,CSHL-HAPMAP,GMI,PERLEGEN,SSMP,WI_SSAHASNP, | 2 | 0.035838 |
SUGCT | chr7 | 40818563 | 40818564 | rs79465884 | + | T | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.012195 |
SUGCT | chr7 | 40818698 | 40818699 | rs145497311 | + | C | C/T | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.989899 |
SUGCT | chr7 | 40818712 | 40818712 | rs78600658 | + | - | -/C | insertion | intron | 5 | 1000GENOMES,GMI,LUNTER,SSMP,TISHKOFF, | 2 | 0.745638 |
SUGCT | chr7 | 40818757 | 40818758 | rs73125734 | + | A | A/G | single | intron | 3 | 1000GENOMES,ILLUMINA,SSMP, | 2 | 0.988522 |
SUGCT | chr7 | 40819222 | 40819223 | rs17439553 | + | A | A/G | single | intron | 8 | 1000GENOMES,BUSHMAN,GMI,HGSV,ILLUMINA-UK,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.919825 |
SUGCT | chr7 | 40819310 | 40819311 | rs17439595 | + | C | C/T | single | intron | 6 | 1000GENOMES,BUSHMAN,GMI,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.930029 |
SUGCT | chr7 | 40819900 | 40819901 | rs76773377 | + | G | A/G | single | intron | 5 | 1000GENOMES,BUSHMAN,GMI,SSMP,TISHKOFF, | 2 | 0.067369 |
SUGCT | chr7 | 40820406 | 40820407 | rs55744420 | + | C | A/C | single | intron | 5 | 1000GENOMES,GMI,HGSV,SSMP,TISHKOFF, | 2 | 0.086921 |
SUGCT | chr7 | 40820640 | 40820641 | rs10499618 | + | T | C/T | single | intron | 9 | 1000GENOMES,AFFY,BUSHMAN,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.060897 |
SUGCT | chr7 | 40820782 | 40820783 | rs12155167 | + | G | A/G | single | intron | 7 | 1000GENOMES,BUSHMAN,GMI,ILLUMINA,SC_SNP,SSMP,TISHKOFF, | 2 | 0.066538 |
SUGCT | chr7 | 40820919 | 40820920 | rs12154576 | + | A | A/G | single | intron | 7 | 1000GENOMES,BUSHMAN,GMI,PERLEGEN,SC_SNP,SSMP,TISHKOFF, | 2 | 0.929983 |
SUGCT | chr7 | 40821106 | 40821107 | rs34146903 | + | C | C/T | single | intron | 5 | 1000GENOMES,ABI,ENSEMBL,HUMANGENOME_JCVI,SSMP, | 2 | 0.980752 |
SUGCT | chr7 | 40821224 | 40821225 | rs75181352 | + | T | C/T | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.013761 |
SUGCT | chr7 | 40821857 | 40821858 | rs76243194 | + | T | C/T | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.073853 |
SUGCT | chr7 | 40821870 | 40821871 | rs78868512 | + | T | A/T | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.074771 |
SUGCT | chr7 | 40822035 | 40822036 | rs17770820 | + | A | A/C | single | intron | 5 | 1000GENOMES,BGI,GMI,PERLEGEN,SSMP, | 2 | 0.963793 |
SUGCT | chr7 | 40822120 | 40822121 | rs10231324 | + | T | C/T | single | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.340197 |
SUGCT | chr7 | 40822283 | 40822286 | rs140108836 | + | ATC | -/ATC | deletion | intron | 2 | 1000GENOMES,LUNTER, | 2 | 0.020202 |
SUGCT | chr7 | 40822313 | 40822314 | rs13240894 | + | G | A/G | single | intron | 13 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.331839 |
SUGCT | chr7 | 40822486 | 40822487 | rs17714085 | + | G | G/T | single | intron | 3 | 1000GENOMES,GMI,PERLEGEN, | 2 | 0.987091 |
SUGCT | chr7 | 40822698 | 40822699 | rs78318304 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.016551 |
SUGCT | chr7 | 40822833 | 40822834 | rs4050963 | + | T | C/T | single | intron | 14 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PERLEGEN,PJP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.339768 |
SUGCT | chr7 | 40823943 | 40823944 | rs17688144 | + | G | A/G | single | intron | 3 | 1000GENOMES,ILLUMINA,PERLEGEN, | 2 | 0.019828 |
SUGCT | chr7 | 40824132 | 40824133 | rs1921743 | + | C | C/T | single | intron | 16 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,PERLEGEN,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.759494 |
SUGCT | chr7 | 40824905 | 40824906 | rs17770843 | + | G | A/G | single | intron | 12 | 1000GENOMES,AFFY,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.225709 |
SUGCT | chr7 | 40825555 | 40825556 | rs13225269 | + | A | A/C | single | intron | 8 | 1000GENOMES,ABI,ENSEMBL,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.902473 |
SUGCT | chr7 | 40825624 | 40825625 | rs79387281 | + | G | A/G | single | intron | 3 | 1000GENOMES,ILLUMINA-UK,TISHKOFF, | 2 | 0.011468 |
SUGCT | chr7 | 40825807 | 40825808 | rs7804009 | + | G | A/G | single | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.338772 |
SUGCT | chr7 | 40825818 | 40825819 | rs78155765 | + | C | C/T | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.986510 |
SUGCT | chr7 | 40826040 | 40826041 | rs7807596 | + | C | C/T | single | intron | 18 | 1000GENOMES,ABI,AFFY,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.630874 |
SUGCT | chr7 | 40826270 | 40826271 | rs7808211 | + | G | A/G | single | intron | 16 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PERLEGEN,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.359677 |
SUGCT | chr7 | 40826273 | 40826274 | rs77426612 | + | A | A/C | single | intron | 2 | 1000GENOMES,COMPLETE_GENOMICS, | 2 | 0.972477 |
SUGCT | chr7 | 40826320 | 40826320 | rs11453803 | + | - | -/C | insertion | intron | 11 | 1000GENOMES,ABI,BL,BUSHMAN,DEVINE_LAB,GMI,HGSV,HUMANGENOME_JCVI,LUNTER,PJP,SSMP, | 2 | 0.632326 |
SUGCT | chr7 | 40826334 | 40826335 | rs113719362 | + | A | A/G | single | intron | 2 | 1000GENOMES,COMPLETE_GENOMICS, | 2 | 0.972477 |
SUGCT | chr7 | 40826387 | 40826388 | rs34213068 | + | A | A/T | single | intron | 8 | 1000GENOMES,ABI,ENSEMBL,HGSV,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.897436 |
SUGCT | chr7 | 40826761 | 40826762 | rs1006376 | + | G | G/T | single | intron | 18 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,TSC-CSHL, | 3 | 0.534884 |
SUGCT | chr7 | 40827057 | 40827075 | rs147097338 | + | AAGATCTCAGAGAAA | -/AAGATCTCAGAGA | deletion | intron | 3 | 1000GENOMES,GMI,LUNTER, | 2 | 0.456382 |
SUGCT | chr7 | 40827510 | 40827511 | rs35105954 | + | G | A/G | single | intron | 5 | 1000GENOMES,ABI,BGI,GMI,SSMP, | 2 | 0.037859 |
SUGCT | chr7 | 40827650 | 40827651 | rs34994199 | + | C | A/C | single | intron | 7 | 1000GENOMES,ABI,ENSEMBL,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.084249 |
SUGCT | chr7 | 40827754 | 40827755 | rs1115714 | + | T | C/T | single | intron | 17 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.360920 |
SUGCT | chr7 | 40827961 | 40827962 | rs1115715 | + | A | A/C | single | intron | 17 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,KRIBB_YJKIM,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.634979 |
SUGCT | chr7 | 40828525 | 40828526 | rs115712936 | + | T | G/T | single | intron | 3 | 1000GENOMES,ILLUMINA,SSMP, | 2 | 0.010889 |
SUGCT | chr7 | 40829119 | 40829120 | rs76787453 | + | T | G/T | single | intron | 4 | 1000GENOMES,BGI,GMI,SSMP, | 2 | 0.038294 |
SUGCT | chr7 | 40829421 | 40829422 | rs723837 | + | C | C/T | single | intron | 8 | 1000GENOMES,ABI,BGI,GMI,PERLEGEN,SSMP,TSC-CSHL,WI_SSAHASNP, | 2 | 0.964193 |
SUGCT | chr7 | 40829443 | 40829444 | rs763714 | + | G | A/G | single | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PERLEGEN,PJP,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 2 | 0.398266 |
SUGCT | chr7 | 40829485 | 40829486 | rs723838 | + | G | A/G | single | intron | 16 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.430776 |
SUGCT | chr7 | 40829947 | 40829948 | rs7784052 | + | T | A/T | single | intron | 10 | 1000GENOMES,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,PJP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.235832 |
SUGCT | chr7 | 40830112 | 40830113 | rs7801192 | + | A | A/T | single | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PERLEGEN,PJP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.659666 |
SUGCT | chr7 | 40830304 | 40830305 | rs55641974 | + | G | C/G | single | intron | 5 | 1000GENOMES,GMI,HGSV,SSMP,TISHKOFF, | 2 | 0.064156 |
SUGCT | chr7 | 40830422 | 40830423 | rs75667357 | + | A | A/G | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.948718 |
SUGCT | chr7 | 40830631 | 40830632 | rs17714132 | + | G | A/G | single | intron | 5 | 1000GENOMES,BGI,GMI,PERLEGEN,SSMP, | 2 | 0.033966 |
SUGCT | chr7 | 40830756 | 40830757 | rs7785245 | + | T | C/T | single | intron | 5 | 1000GENOMES,BCM-HGSC-SUB,ILLUMINA,PERLEGEN,WI_SSAHASNP, | 2 | 0.044436 |
SUGCT | chr7 | 40830836 | 40830837 | rs12701835 | + | T | C/T | single | intron | 12 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.341096 |
SUGCT | chr7 | 40831034 | 40831034 | rs202084171 | + | - | -/C | insertion | intron | 1 | 1000GENOMES, | 2 | 0.663912 |
SUGCT | chr7 | 40831035 | 40831035 | rs35014593 | + | - | -/CATT | insertion | intron | 8 | 1000GENOMES,ABI,BL,BUSHMAN,GMI,HUMANGENOME_JCVI,LUNTER,TISHKOFF, | 2 | 0.664070 |
SUGCT | chr7 | 40831134 | 40831135 | rs17439694 | + | G | A/G | single | intron | 4 | 1000GENOMES,ILLUMINA,PERLEGEN,SSMP, | 2 | 0.013158 |
SUGCT | chr7 | 40831295 | 40831296 | rs10231545 | + | G | A/G | single | intron | 14 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,PERLEGEN,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.336000 |
SUGCT | chr7 | 40832143 | 40832144 | rs17688247 | + | C | C/T | single | intron | 10 | 1000GENOMES,ABI,ENSEMBL,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.920010 |
SUGCT | chr7 | 40832365 | 40832366 | rs113528033 | + | A | A/G | single | intron | 2 | 1000GENOMES,BUSHMAN, | 2 | 0.989918 |
SUGCT | chr7 | 40832581 | 40832582 | rs78155316 | + | A | A/G | single | intron | 4 | 1000GENOMES,GMI,SSMP,TISHKOFF, | 2 | 0.939669 |
SUGCT | chr7 | 40832596 | 40832597 | rs1203570 | + | A | A/C | single | intron | 23 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 3 | 0.332986 |
SUGCT | chr7 | 40833302 | 40833303 | rs114295515 | + | C | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.984321 |
SUGCT | chr7 | 40833480 | 40833481 | rs55832912 | + | A | A/G | single | intron | 4 | 1000GENOMES,GMI,HGSV,SSMP, | 2 | 0.939156 |
SUGCT | chr7 | 40833599 | 40833600 | rs35628600 | + | G | A/G | single | intron | 10 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSMP, | 2 | 0.398445 |
SUGCT | chr7 | 40833617 | 40833618 | rs34195626 | + | T | -/T | deletion | intron | 9 | 1000GENOMES,ABI,BILGI_BIOE,BUSHMAN,GMI,HGSV,HUMANGENOME_JCVI,LUNTER,SSMP, | 2 | 0.437672 |
SUGCT | chr7 | 40834715 | 40834716 | rs17688285 | + | T | G/T | single | intron | 12 | 1000GENOMES,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.340197 |
SUGCT | chr7 | 40834824 | 40834824 | rs34859258 | + | - | -/A | insertion | intron | 11 | 1000GENOMES,ABI,BL,BUSHMAN,DEVINE_LAB,GMI,HUMANGENOME_JCVI,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 0.657967 |
SUGCT | chr7 | 40835944 | 40835945 | rs1921746 | + | T | C/T | single | intron | 14 | 1000GENOMES,ABI,AFFY,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PERLEGEN,PJP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.424400 |
SUGCT | chr7 | 40836218 | 40836219 | rs1921747 | + | A | A/G | single | intron | 14 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.661791 |
SUGCT | chr7 | 40836243 | 40836244 | rs1921748 | + | A | A/G | single | intron | 14 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,PJP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.669656 |
SUGCT | chr7 | 40836290 | 40836291 | rs1203569 | + | T | C/T | single | intron | 23 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.583353 |
SUGCT | chr7 | 40836520 | 40836521 | rs17620991 | + | G | C/G | single | intron | 7 | 1000GENOMES,ABI,HUMANGENOME_JCVI,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.069260 |
SUGCT | chr7 | 40837141 | 40837142 | rs17621020 | + | G | C/G | single | intron | 4 | 1000GENOMES,GMI,PERLEGEN,SSMP, | 2 | 0.058759 |
SUGCT | chr7 | 40837313 | 40837314 | rs10226900 | + | A | A/G | single | intron | 11 | 1000GENOMES,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.666667 |
SUGCT | chr7 | 40837501 | 40837502 | rs78803386 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.023955 |
SUGCT | chr7 | 40837735 | 40837736 | rs10227384 | + | A | A/G | single | intron | 9 | 1000GENOMES,BL,ENSEMBL,GMI,HGSV,ILLUMINA,PJP,SSMP,WUGSC_SSAHASNP, | 2 | 0.615949 |
SUGCT | chr7 | 40837736 | 40837737 | rs10272516 | + | T | C/T | single | intron | 8 | 1000GENOMES,BL,ENSEMBL,GMI,HGSV,PJP,SSMP,WUGSC_SSAHASNP, | 2 | 0.380037 |
SUGCT | chr7 | 40837965 | 40837966 | rs71536699 | + | G | A/G | single | intron | 4 | 1000GENOMES,ENSEMBL,HUMANGENOME_JCVI,ILLUMINA, | 2 | 0.021082 |
SUGCT | chr7 | 40838345 | 40838347 | rs35927386 | + | AT | -/AT | deletion | intron | 9 | 1000GENOMES,ABI,BILGI_BIOE,GMI,HUMANGENOME_JCVI,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 0.394037 |
SUGCT | chr7 | 40838349 | 40838350 | rs71965598 | + | A | -/A/AT | in-del | intron | 6 | 1000GENOMES,BCMHGSC_JDW,BUSHMAN,DEVINE_LAB,GMI,PJP, | 2 | 0.338991 |
SUGCT | chr7 | 40838559 | 40838560 | rs17621030 | + | T | C/T | single | intron | 14 | 1000GENOMES,AFFY,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF, | 3 | 0.332849 |
SUGCT | chr7 | 40838613 | 40838614 | rs73689851 | + | C | C/T | single | intron | 4 | 1000GENOMES,ILLUMINA,ILLUMINA-UK,TISHKOFF, | 2 | 0.988532 |
SUGCT | chr7 | 40838956 | 40838957 | rs13237870 | + | C | C/G | single | intron | 13 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.671674 |
SUGCT | chr7 | 40839308 | 40839309 | rs1203572 | - | T | A/C | single | intron | 9 | 1000GENOMES,AFFY,COMPLETE_GENOMICS,KRIBB_YJKIM,KWOK,PERLEGEN,SC_JCM,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.904141 |
SUGCT | chr7 | 40839646 | 40839647 | rs10243080 | + | C | C/T | single | intron | 16 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.667019 |
SUGCT | chr7 | 40839928 | 40839929 | rs117406701 | + | C | C/T | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.986075 |
SUGCT | chr7 | 40840155 | 40840156 | rs10276001 | + | A | A/G | single | intron | 11 | 1000GENOMES,ABI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,PJP,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.664682 |
SUGCT | chr7 | 40840969 | 40840970 | rs17688414 | + | C | C/T | single | intron | 12 | 1000GENOMES,ABI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.660952 |
SUGCT | chr7 | 40841038 | 40841039 | rs35712272 | + | C | C/T | single | intron | 11 | 1000GENOMES,ABI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.661180 |
SUGCT | chr7 | 40841133 | 40841134 | rs73312233 | + | G | G/T | single | intron | 2 | 1000GENOMES,COMPLETE_GENOMICS, | 2 | 0.988532 |
SUGCT | chr7 | 40841571 | 40841572 | rs1203573 | - | A | C/T | single | intron | 21 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KWOK,PERLEGEN,PJP,SC_JCM,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.622940 |
SUGCT | chr7 | 40841618 | 40841619 | rs17714215 | + | C | C/G | single | intron | 5 | 1000GENOMES,BGI,GMI,PERLEGEN,SSMP, | 2 | 0.963362 |
SUGCT | chr7 | 40841727 | 40841728 | rs113038204 | + | T | C/T | single | intron | 2 | 1000GENOMES,BUSHMAN, | 2 | 0.010092 |
SUGCT | chr7 | 40841977 | 40841978 | rs10225209 | + | A | A/G | single | intron | 15 | 1000GENOMES,ABI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.665428 |
SUGCT | chr7 | 40842144 | 40842145 | rs10225445 | + | A | A/T | single | intron | 16 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.665821 |
SUGCT | chr7 | 40842291 | 40842292 | rs1203574 | + | C | C/G | single | intron | 22 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 2 | 0.015320 |
SUGCT | chr7 | 40842336 | 40842337 | rs1203575 | - | T | A/G | single | intron | 21 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KWOK,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 2 | 0.336731 |
SUGCT | chr7 | 40844274 | 40844275 | rs17621117 | + | G | C/G | single | intron | 5 | 1000GENOMES,GMI,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.058157 |
SUGCT | chr7 | 40844462 | 40844463 | rs1974547 | + | G | A/G | single | intron | 16 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PERLEGEN,PJP,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 2 | 0.391985 |
SUGCT | chr7 | 40845801 | 40845802 | rs10268219 | + | C | C/T | single | intron | 17 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.606803 |
SUGCT | chr7 | 40846090 | 40846091 | rs12666544 | + | T | C/T | single | intron | 14 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.334614 |
SUGCT | chr7 | 40846223 | 40846224 | rs117290020 | + | T | A/T | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.013490 |
SUGCT | chr7 | 40846481 | 40846482 | rs55764442 | + | A | A/G | single | intron | 7 | 1000GENOMES,BUSHMAN,GMI,HGSV,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.939422 |
SUGCT | chr7 | 40846594 | 40846595 | rs10272186 | + | C | A/C | single | intron | 12 | 1000GENOMES,AFFY,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,KRIBB_YJKIM,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.231731 |
SUGCT | chr7 | 40846862 | 40846863 | rs79585070 | + | A | A/G | single | intron | 4 | 1000GENOMES,GMI,SSMP,TISHKOFF, | 2 | 0.937086 |
SUGCT | chr7 | 40847220 | 40847221 | rs17770991 | + | C | C/T | single | intron | 12 | 1000GENOMES,AFFY,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.606032 |
SUGCT | chr7 | 40847267 | 40847268 | rs78818493 | + | C | C/T | single | intron | 5 | 1000GENOMES,BUSHMAN,GMI,SSMP,TISHKOFF, | 2 | 0.939450 |
SUGCT | chr7 | 40847482 | 40847483 | rs116907501 | + | G | A/G | single | intron | 2 | 1000GENOMES,GMI, | 2 | 0.041667 |
SUGCT | chr7 | 40847638 | 40847639 | rs55834632 | + | A | A/G | single | intron | 5 | 1000GENOMES,GMI,HGSV,SSMP,TISHKOFF, | 2 | 0.936672 |
SUGCT | chr7 | 40847647 | 40847648 | rs10276629 | + | G | A/G | single | intron | 10 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.334106 |
SUGCT | chr7 | 40847654 | 40847655 | rs76391180 | + | C | C/T | single | intron | 4 | 1000GENOMES,BGI,GMI,SSMP, | 2 | 0.961706 |
SUGCT | chr7 | 40847816 | 40847817 | rs145172435 | + | T | A/T | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.010101 |
SUGCT | chr7 | 40847831 | 40847832 | rs1203576 | + | A | A/T | single | intron | 20 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.227708 |
SUGCT | chr7 | 40847908 | 40847909 | rs2302025 | + | G | A/G | single | intron | 16 | 1000GENOMES,ABI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP,YUSUKE, | 2 | 0.392840 |
SUGCT | chr7 | 40847948 | 40847949 | rs2302026 | + | G | G/T | single | intron | 14 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,PERLEGEN,SSMP,TISHKOFF,WUGSC_SSAHASNP,YUSUKE, | 2 | 0.771368 |
SUGCT | chr7 | 40848205 | 40848206 | rs3815265 | + | T | C/T | single | intron | 17 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP,YUSUKE, | 2 | 0.323921 |
SUGCT | chr7 | 40848402 | 40848403 | rs886831 | + | G | C/G | single | intron | 18 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.332840 |
SUGCT | chr7 | 40848501 | 40848502 | rs78732158 | + | A | A/G | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.937086 |
SUGCT | chr7 | 40848535 | 40848536 | rs111632611 | + | C | C/G | single | intron | 2 | 1000GENOMES,BUSHMAN, | 2 | 0.989918 |
SUGCT | chr7 | 40848551 | 40848552 | rs13225441 | + | A | A/G | single | intron | 7 | 1000GENOMES,ABI,HUMANGENOME_JCVI,ILLUMINA,PJP,SSAHASNP,SSMP, | 2 | 0.983945 |
SUGCT | chr7 | 40848558 | 40848559 | rs4720376 | + | G | A/G | single | intron | 9 | 1000GENOMES,AFFY,BGI,GMI,ILLUMINA,KRIBB_YJKIM,SC_SNP,SSMP,WI_SSAHASNP, | 2 | 0.039515 |
SUGCT | chr7 | 40849152 | 40849153 | rs1921745 | - | G | C/T | single | intron | 12 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,PERLEGEN,PJP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.766934 |
SUGCT | chr7 | 40849939 | 40849940 | rs141786424 | + | A | A/G | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.942608 |
SUGCT | chr7 | 40850195 | 40850196 | rs12540807 | + | T | G/T | single | intron | 5 | 1000GENOMES,ABI,CSHL-HAPMAP,GMI,SSMP, | 2 | 0.038294 |
SUGCT | chr7 | 40850789 | 40850790 | rs62449401 | + | C | C/T | single | intron | 10 | 1000GENOMES,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.661180 |
SUGCT | chr7 | 40851052 | 40851053 | rs2108375 | + | T | C/T | single | intron | 15 | 1000GENOMES,ABI,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.368925 |
SUGCT | chr7 | 40851165 | 40851166 | rs2108376 | + | C | C/T | single | intron | 13 | 1000GENOMES,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.624829 |
SUGCT | chr7 | 40851241 | 40851242 | rs66651482 | + | G | G/T | single | intron | 5 | 1000GENOMES,ENSEMBL,HUMANGENOME_JCVI,SSMP,TISHKOFF, | 2 | 0.915674 |
SUGCT | chr7 | 40851302 | 40851303 | rs76081195 | + | C | C/T | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.936672 |
SUGCT | chr7 | 40851734 | 40851735 | rs67648979 | + | T | C/T | single | intron | 5 | 1000GENOMES,ENSEMBL,HUMANGENOME_JCVI,SSMP,TISHKOFF, | 2 | 0.085701 |
SUGCT | chr7 | 40851921 | 40851922 | rs35146091 | + | A | A/G | single | intron | 12 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.659516 |
SUGCT | chr7 | 40852632 | 40852633 | rs34689844 | + | G | A/G | single | intron | 11 | 1000GENOMES,ABI,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,PJP,SSMP,TISHKOFF, | 2 | 0.375686 |
SUGCT | chr7 | 40853502 | 40853503 | rs35995194 | + | A | A/G | single | intron | 14 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.563213 |
SUGCT | chr7 | 40853513 | 40853514 | rs75535261 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.018728 |
SUGCT | chr7 | 40853852 | 40853853 | rs78107670 | + | A | A/G | single | intron | 4 | 1000GENOMES,BGI,GMI,SSMP, | 2 | 0.962810 |
SUGCT | chr7 | 40854094 | 40854095 | rs113845832 | + | A | A/G | single | intron | 2 | 1000GENOMES,BUSHMAN, | 2 | 0.989918 |
SUGCT | chr7 | 40854156 | 40854156 | rs199748013 | + | - | -/T | insertion | intron | 2 | 1000GENOMES,GMI, | 2 | 0.941690 |
SUGCT | chr7 | 40854303 | 40854304 | rs12701836 | + | C | C/T | single | intron | 14 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.606828 |
SUGCT | chr7 | 40854445 | 40854446 | rs55992488 | + | G | A/G | single | intron | 5 | 1000GENOMES,GMI,HGSV,ILLUMINA,SSMP, | 2 | 0.084034 |
SUGCT | chr7 | 40854634 | 40854635 | rs74758827 | + | G | C/G | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.061258 |
SUGCT | chr7 | 40855328 | 40855329 | rs78487475 | + | G | G/T | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.937086 |
SUGCT | chr7 | 40855719 | 40855720 | rs12701837 | + | A | A/G | single | intron | 17 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.610304 |
SUGCT | chr7 | 40855758 | 40855759 | rs75620270 | + | A | A/G | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.937500 |
SUGCT | chr7 | 40856481 | 40856482 | rs35570092 | + | C | A/C | single | intron | 12 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.329982 |
SUGCT | chr7 | 40856847 | 40856848 | rs10233069 | + | C | A/C | single | intron | 16 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.368498 |
SUGCT | chr7 | 40857120 | 40857121 | rs10252053 | + | T | C/T | single | intron | 15 | 1000GENOMES,AFFY,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.324675 |
SUGCT | chr7 | 40857291 | 40857292 | rs17688549 | + | G | A/G | single | intron | 5 | 1000GENOMES,AFFY,GMI,PERLEGEN,SSMP, | 2 | 0.061679 |
SUGCT | chr7 | 40858003 | 40858004 | rs73125791 | + | C | C/G | single | intron | 7 | 1000GENOMES,COMPLETE_GENOMICS,ENSEMBL,GMI,PJP,SSMP,TISHKOFF, | 2 | 0.771062 |
SUGCT | chr7 | 40858478 | 40858479 | rs62449405 | + | G | G/T | single | intron | 8 | 1000GENOMES,BCMHGSC_JDW,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,SSMP,TISHKOFF, | 2 | 0.765811 |
SUGCT | chr7 | 40858577 | 40858578 | rs13243593 | + | C | A/C | single | intron | 6 | 1000GENOMES,BCMHGSC_JDW,GMI,PJP,SSAHASNP,SSMP, | 2 | 0.371442 |
SUGCT | chr7 | 40858841 | 40858842 | rs181339957 | + | C | A/C | single | intron | 1 | 1000GENOMES, | 2 | 0.011019 |
SUGCT | chr7 | 40859728 | 40859729 | rs148512235 | + | T | G/T | single | intron | 1 | 1000GENOMES, | 2 | 0.013315 |
SUGCT | chr7 | 40859879 | 40859880 | rs140376943 | + | T | -/T | deletion | intron | 5 | 1000GENOMES,BILGI_BIOE,GMI,PJP,SSMP, | 2 | 0.108356 |
SUGCT | chr7 | 40860822 | 40860823 | rs77962412 | + | T | A/T | single | intron | 4 | 1000GENOMES,ENSEMBL,PJP,SSMP, | 2 | 0.016514 |
SUGCT | chr7 | 40860919 | 40860920 | rs142664696 | + | A | A/G | single | intron | 4 | 1000GENOMES,BL,GMI,SSMP, | 2 | 0.803949 |
SUGCT | chr7 | 40861083 | 40861084 | rs149346062 | + | A | A/T | single | intron | 4 | 1000GENOMES,GMI,PJP,SSMP, | 2 | 0.610193 |
SUGCT | chr7 | 40861180 | 40861181 | rs143041394 | + | T | C/T | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.042241 |
SUGCT | chr7 | 40861277 | 40861278 | rs148192245 | + | C | C/T | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.953627 |
SUGCT | chr7 | 40861788 | 40861789 | rs140137796 | + | G | -/G | deletion | intron | 5 | 1000GENOMES,BILGI_BIOE,GMI,LUNTER,SSMP, | 2 | 0.057392 |
SUGCT | chr7 | 40861828 | 40861829 | rs142530316 | + | T | C/T | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.083563 |
SUGCT | chr7 | 40862050 | 40862051 | rs150558358 | + | G | A/G | single | intron | 4 | 1000GENOMES,GMI,MPI_MOLGEN,SSMP, | 2 | 0.062902 |
SUGCT | chr7 | 40862369 | 40862370 | rs10235458 | + | C | C/T | single | intron | 15 | 1000GENOMES,AFFY,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.619390 |
SUGCT | chr7 | 40862444 | 40862445 | rs1203571 | + | A | A/G | single | intron | 8 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA,KWOK,PERLEGEN,SC_JCM,TISHKOFF,TSC-CSHL, | 2 | 0.929562 |
SUGCT | chr7 | 40862762 | 40862763 | rs17688571 | + | T | C/T | single | intron | 9 | 1000GENOMES,AFFY,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.072209 |
SUGCT | chr7 | 40862985 | 40862985 | rs201624198 | + | - | -/T | insertion | intron | 1 | 1000GENOMES, | 2 | 0.983930 |
SUGCT | chr7 | 40863000 | 40863001 | rs77918995 | + | A | A/G | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.946475 |
SUGCT | chr7 | 40863526 | 40863527 | rs73689856 | + | C | C/T | single | intron | 3 | 1000GENOMES,ILLUMINA-UK,TISHKOFF, | 2 | 0.988073 |
SUGCT | chr7 | 40864039 | 40864042 | rs145003095 | + | AGG | -/AGG | deletion | intron | 5 | 1000GENOMES,BILGI_BIOE,GMI,LUNTER,SSMP, | 2 | 0.060147 |
SUGCT | chr7 | 40865218 | 40865219 | rs13230202 | + | T | C/T | single | intron | 10 | 1000GENOMES,ABI,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.129296 |
SUGCT | chr7 | 40865302 | 40865303 | rs10951639 | + | C | C/T | single | intron | 17 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.566064 |
SUGCT | chr7 | 40865509 | 40865510 | rs140208608 | + | C | C/T | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.989899 |
SUGCT | chr7 | 40865582 | 40865583 | rs1029620 | + | G | A/G | single | intron | 16 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.435418 |
SUGCT | chr7 | 40865599 | 40865600 | rs79354326 | + | G | G/T | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.939570 |
SUGCT | chr7 | 40865695 | 40865696 | rs17688583 | + | C | C/T | single | intron | 11 | 1000GENOMES,ABI,AFFY,ENSEMBL,HGSV,HUMANGENOME_JCVI,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.871724 |
SUGCT | chr7 | 40865708 | 40865709 | rs1029621 | + | C | C/T | single | intron | 20 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 2 | 0.701800 |
SUGCT | chr7 | 40866128 | 40866129 | rs145584896 | + | A | A/C | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.989899 |
SUGCT | chr7 | 40866234 | 40866235 | rs1012568 | - | T | A/T | single | intron | 10 | 1000GENOMES,ABI,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.857601 |
SUGCT | chr7 | 40866241 | 40866242 | rs1012567 | - | G | C/G | single | intron | 12 | 1000GENOMES,ABI,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PERLEGEN,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.864401 |
SUGCT | chr7 | 40866662 | 40866663 | rs17688601 | + | C | A/C | single | intron | 10 | 1000GENOMES,ABI,ENSEMBL,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.127451 |
SUGCT | chr7 | 40866845 | 40866846 | rs17688607 | + | G | A/C/G | single | intron | 6 | 1000GENOMES,BCMHGSC_JDW,ENSEMBL,GMI,ILLUMINA,PERLEGEN, | 3 | 0.026258 |
SUGCT | chr7 | 40868140 | 40868141 | rs4723979 | + | C | C/T | single | intron | 18 | 1000GENOMES,ABI,AFFY,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.723138 |
SUGCT | chr7 | 40868430 | 40868431 | rs1013574 | + | C | C/G | single | intron | 18 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 2 | 0.722020 |
SUGCT | chr7 | 40868486 | 40868487 | rs79252614 | + | G | A/G | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.058312 |
SUGCT | chr7 | 40868864 | 40868865 | rs1013575 | + | C | A/C | single | intron | 7 | 1000GENOMES,ABI,BGI,BUSHMAN,GMI,SC_JCM,TSC-CSHL, | 2 | 0.041538 |
SUGCT | chr7 | 40869155 | 40869156 | rs1013576 | + | A | A/T | single | intron | 6 | 1000GENOMES,ABI,BGI,GMI,SSMP,TSC-CSHL, | 2 | 0.962348 |
SUGCT | chr7 | 40869468 | 40869469 | rs80171869 | + | G | C/G | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.011314 |
SUGCT | chr7 | 40869490 | 40869491 | rs1203579 | + | G | A/G | single | intron | 5 | 1000GENOMES,KWOK,SC_JCM,TISHKOFF,TSC-CSHL, | 2 | 0.064950 |
SUGCT | chr7 | 40869753 | 40869754 | rs6462989 | + | A | A/C | single | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.631113 |
SUGCT | chr7 | 40869917 | 40869918 | rs76731615 | + | G | A/G | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.035248 |
SUGCT | chr7 | 40869965 | 40869966 | rs34565813 | + | C | C/T | single | intron | 11 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,PJP,SSMP,TISHKOFF, | 2 | 0.723870 |
SUGCT | chr7 | 40870197 | 40870198 | rs79182998 | + | C | C/T | single | intron | 3 | 1000GENOMES,BGI,GMI, | 2 | 0.962576 |
SUGCT | chr7 | 40870616 | 40870617 | rs10247138 | + | C | C/T | single | intron | 5 | 1000GENOMES,HGSV,PJP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.935434 |
SUGCT | chr7 | 40870770 | 40870771 | rs10247275 | + | C | C/T | single | intron | 14 | 1000GENOMES,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,PERLEGEN,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.758306 |
SUGCT | chr7 | 40870934 | 40870935 | rs10279715 | + | A | A/G | single | intron | 20 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CORNELL,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.570412 |
SUGCT | chr7 | 40871155 | 40871156 | rs12537964 | + | T | A/T | single | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.297345 |
SUGCT | chr7 | 40871385 | 40871386 | rs73689859 | + | A | A/G | single | intron | 4 | 1000GENOMES,ILLUMINA,ILLUMINA-UK,TISHKOFF, | 2 | 0.987615 |
SUGCT | chr7 | 40871684 | 40871685 | rs17714394 | + | A | A/T | single | intron | 5 | 1000GENOMES,GMI,ILLUMINA,PERLEGEN,SSMP, | 2 | 0.940146 |
SUGCT | chr7 | 40871857 | 40871858 | rs13246232 | + | A | A/G | single | intron | 16 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.628854 |
SUGCT | chr7 | 40872173 | 40872174 | rs35107273 | + | C | C/T | single | intron | 8 | 1000GENOMES,ABI,BGI,BUSHMAN,COMPLETE_GENOMICS,GMI,HUMANGENOME_JCVI,ILLUMINA, | 2 | 0.667430 |
SUGCT | chr7 | 40872173 | 40872174 | rs201151778 | + | C | -/C | deletion | intron | 1 | 1000GENOMES, | 2 | 0.332874 |
SUGCT | chr7 | 40872278 | 40872279 | rs76388533 | + | T | C/T | single | intron | 3 | 1000GENOMES,GMI,ILLUMINA-UK, | 2 | 0.068807 |
SUGCT | chr7 | 40872278 | 40872278 | rs199669253 | + | - | -/C | insertion | intron | 1 | 1000GENOMES, | 2 | 0.931589 |
SUGCT | chr7 | 40872427 | 40872428 | rs6949092 | + | T | C/T | single | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.287215 |
SUGCT | chr7 | 40873220 | 40873221 | rs1733483 | - | A | C/T | single | intron | 22 | 1000GENOMES,AFFY,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.627907 |
SUGCT | chr7 | 40873386 | 40873388 | rs35074235 | + | AG | -/AG | deletion | intron | 11 | 1000GENOMES,ABI,BUSHMAN,DEVINE_LAB,GMI,HGSV,HUMANGENOME_JCVI,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 0.227314 |
SUGCT | chr7 | 40873915 | 40873916 | rs9639838 | + | C | C/T | single | intron | 16 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.638564 |
SUGCT | chr7 | 40874130 | 40874131 | rs76254322 | + | G | G/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.979983 |
SUGCT | chr7 | 40874144 | 40874145 | rs7809237 | + | A | A/C | single | intron | 14 | 1000GENOMES,ABI,BGI,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.536775 |
SUGCT | chr7 | 40874375 | 40874376 | rs7809981 | + | G | G/T | single | intron | 17 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PERLEGEN,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.603946 |
SUGCT | chr7 | 40875191 | 40875192 | rs17621345 | + | A | A/C | single | intron | 11 | 1000GENOMES,AFFY,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.855509 |
SUGCT | chr7 | 40875457 | 40875458 | rs17714442 | + | A | A/T | single | intron | 10 | 1000GENOMES,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.685727 |
SUGCT | chr7 | 40875646 | 40875647 | rs74742717 | + | A | A/C | single | intron | 2 | 1000GENOMES,BL, | 2 | 0.976501 |
SUGCT | chr7 | 40876059 | 40876060 | rs12538907 | + | C | C/T | single | intron | 13 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.599387 |
SUGCT | chr7 | 40876079 | 40876080 | rs12538949 | + | G | A/G | single | intron | 12 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,SSMP,TISHKOFF, | 2 | 0.399153 |
SUGCT | chr7 | 40876113 | 40876114 | rs12538933 | + | C | C/T | single | intron | 13 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.588830 |
SUGCT | chr7 | 40876136 | 40876137 | rs12538963 | + | G | A/G | single | intron | 7 | 1000GENOMES,BGI,CSHL-HAPMAP,GMI,ILLUMINA,KRIBB_YJKIM,SSMP, | 2 | 0.042126 |
SUGCT | chr7 | 40876154 | 40876155 | rs12538965 | + | G | A/G | single | intron | 11 | 1000GENOMES,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.401533 |
SUGCT | chr7 | 40876785 | 40876786 | rs1921757 | - | A | C/T | single | intron | 15 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,KRIBB_YJKIM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.391669 |
SUGCT | chr7 | 40877283 | 40877284 | rs117462113 | + | G | A/G | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.026545 |
SUGCT | chr7 | 40877396 | 40877397 | rs10246441 | + | A | A/G | single | intron | 12 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,SC_SNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.603109 |
SUGCT | chr7 | 40877472 | 40877473 | rs12701838 | + | A | A/G | single | intron | 9 | 1000GENOMES,ABI,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.843263 |
SUGCT | chr7 | 40877715 | 40877716 | rs12019351 | + | A | A/C | single | intron | 11 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,SC_SNP,SSMP,TISHKOFF, | 2 | 0.596235 |
SUGCT | chr7 | 40877718 | 40877719 | rs73689862 | + | G | A/G | single | intron | 3 | 1000GENOMES,ILLUMINA-UK,TISHKOFF, | 2 | 0.012385 |
SUGCT | chr7 | 40878017 | 40878018 | rs73689863 | + | G | G/T | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.927523 |
SUGCT | chr7 | 40878205 | 40878206 | rs78490985 | + | C | C/T | single | intron | 4 | 1000GENOMES,BGI,GMI,SSMP, | 2 | 0.959095 |
SUGCT | chr7 | 40878714 | 40878715 | rs76844348 | + | C | C/T | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.925688 |
SUGCT | chr7 | 40878814 | 40878815 | rs55996031 | + | T | G/T | single | intron | 5 | 1000GENOMES,HGSV,ILLUMINA-UK,PJP,TISHKOFF, | 2 | 0.012385 |
SUGCT | chr7 | 40878895 | 40878896 | rs2108377 | + | T | C/T | single | intron | 14 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.465478 |
SUGCT | chr7 | 40879567 | 40879567 | rs139342457 | + | - | -/A | insertion | intron | 1 | 1000GENOMES, | 2 | 0.982094 |
SUGCT | chr7 | 40880199 | 40880200 | rs7777500 | + | G | A/G | single | intron | 9 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,SSMP,WI_SSAHASNP, | 2 | 0.320769 |
SUGCT | chr7 | 40880498 | 40880498 | rs74810691 | + | - | -/T | insertion | intron | 4 | 1000GENOMES,GMI,LUNTER,SSMP, | 2 | 0.695592 |
SUGCT | chr7 | 40880590 | 40880591 | rs1921756 | - | T | A/G | single | intron | 11 | 1000GENOMES,ABI,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,PERLEGEN,SSMP,TSC-CSHL, | 4 | 0.519970 |
SUGCT | chr7 | 40880734 | 40880735 | rs17688697 | + | G | G/T | single | intron | 12 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PERLEGEN,PJP,SSMP, | 2 | 0.524680 |
SUGCT | chr7 | 40881613 | 40881614 | rs1921755 | - | T | A/C | single | intron | 12 | 1000GENOMES,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP,SSMP,TSC-CSHL, | 2 | 0.526803 |
SUGCT | chr7 | 40881937 | 40881938 | rs67369140 | + | G | A/G | single | intron | 6 | 1000GENOMES,BGI,BUSHMAN,COMPLETE_GENOMICS,GMI,SSMP, | 2 | 0.386061 |
SUGCT | chr7 | 40882642 | 40882643 | rs732890 | + | T | C/T | single | intron | 17 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PJP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.357694 |
SUGCT | chr7 | 40882772 | 40882773 | rs758010 | + | A | A/T | single | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.631675 |
SUGCT | chr7 | 40882839 | 40882840 | rs4723981 | + | G | A/G | single | intron | 10 | 1000GENOMES,BGI,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.060329 |
SUGCT | chr7 | 40882875 | 40882876 | rs2005766 | + | C | C/T | single | intron | 11 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.630306 |
SUGCT | chr7 | 40883101 | 40883103 | rs10533463 | + | TG | -/TG | deletion | intron | 4 | 1000GENOMES,BL,DEVINE_LAB,LUNTER, | 2 | 0.356290 |
SUGCT | chr7 | 40883235 | 40883236 | rs4425648 | + | T | G/T | single | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,PJP,SC_JCM,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.365253 |
SUGCT | chr7 | 40883282 | 40883283 | rs4265100 | + | G | C/G | single | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,PJP,SC_JCM,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.363885 |
SUGCT | chr7 | 40883309 | 40883310 | rs4720378 | + | G | C/G | single | intron | 14 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.364797 |
SUGCT | chr7 | 40883433 | 40883434 | rs4723982 | + | G | A/G | single | intron | 14 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.365709 |
SUGCT | chr7 | 40883551 | 40883552 | rs4720379 | + | G | A/G | single | intron | 12 | 1000GENOMES,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.364840 |
SUGCT | chr7 | 40884241 | 40884242 | rs1921754 | - | C | A/G | single | intron | 16 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.364920 |
SUGCT | chr7 | 40884419 | 40884420 | rs1921753 | - | C | A/G | single | intron | 13 | 1000GENOMES,ABI,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,SC_JCM,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.364507 |
SUGCT | chr7 | 40884533 | 40884534 | rs4720380 | + | A | A/G | single | intron | 11 | 1000GENOMES,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.635160 |
SUGCT | chr7 | 40884618 | 40884619 | rs73689864 | + | A | A/T | single | intron | 2 | 1000GENOMES,ILLUMINA-UK, | 2 | 0.988991 |
SUGCT | chr7 | 40884656 | 40884657 | rs55748232 | + | A | A/T | single | intron | 6 | 1000GENOMES,BGI,GMI,HGSV,ILLUMINA-UK,TISHKOFF, | 2 | 0.538991 |
SUGCT | chr7 | 40885093 | 40885094 | rs74471237 | + | G | A/G | single | intron | 3 | 1000GENOMES,ILLUMINA,TISHKOFF, | 2 | 0.021109 |
SUGCT | chr7 | 40885227 | 40885228 | rs4720381 | + | G | G/T | single | intron | 13 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.638686 |
SUGCT | chr7 | 40885357 | 40885358 | rs73689865 | + | T | A/T | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.073394 |
SUGCT | chr7 | 40885512 | 40885513 | rs6952818 | + | T | C/T | single | intron | 14 | 1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.367701 |
SUGCT | chr7 | 40885524 | 40885525 | rs4720382 | + | A | A/G | single | intron | 5 | 1000GENOMES,BGI,GMI,SSMP,WI_SSAHASNP, | 2 | 0.959530 |
SUGCT | chr7 | 40885657 | 40885658 | rs6952995 | + | T | C/T | single | intron | 13 | 1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.365174 |
SUGCT | chr7 | 40885662 | 40885663 | rs6970936 | + | G | A/G | single | intron | 12 | 1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.386654 |
SUGCT | chr7 | 40885830 | 40885831 | rs12531482 | + | G | A/G | single | intron | 6 | 1000GENOMES,BGI,CSHL-HAPMAP,GMI,SSAHASNP,SSMP, | 2 | 0.040470 |
SUGCT | chr7 | 40885933 | 40885934 | rs2876979 | + | G | A/G | single | intron | 16 | 1000GENOMES,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,ILLUMINA,KRIBB_YJKIM,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 2 | 0.357897 |
SUGCT | chr7 | 40886575 | 40886576 | rs7808121 | + | C | C/T | single | intron | 14 | 1000GENOMES,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PJP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.640816 |
SUGCT | chr7 | 40886679 | 40886680 | rs77686906 | + | A | A/C | single | intron | 4 | 1000GENOMES,BGI,GMI,SSMP, | 2 | 0.959530 |
SUGCT | chr7 | 40886715 | 40886716 | rs7808678 | + | G | A/G | single | intron | 12 | 1000GENOMES,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,PJP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.364840 |
SUGCT | chr7 | 40886757 | 40886758 | rs7808304 | + | A | A/G | single | intron | 14 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.635036 |
SUGCT | chr7 | 40886853 | 40886853 | rs10676694 | + | - | -/ACTC | insertion | intron | 5 | 1000GENOMES,BL,BUSHMAN,DEVINE_LAB,LUNTER, | 2 | 0.542661 |
SUGCT | chr7 | 40886854 | 40886854 | rs35114282 | + | - | -/ACTC/CT | insertion | intron | 3 | 1000GENOMES,DEVINE_LAB,SSMP, | 2 | 0.560606 |
SUGCT | chr7 | 40886998 | 40887002 | rs201875749 | + | TTTC | -/TTTC | deletion | intron | 1 | 1000GENOMES, | 2 | 0.340680 |
SUGCT | chr7 | 40887007 | 40887008 | rs148228342 | + | T | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.016070 |
SUGCT | chr7 | 40887410 | 40887411 | rs28621645 | + | A | A/G | single | intron | 13 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.635036 |
SUGCT | chr7 | 40887694 | 40887695 | rs12532916 | + | G | A/G | single | intron | 6 | 1000GENOMES,ABI,BGI,CSHL-HAPMAP,GMI,SSMP, | 2 | 0.039486 |
SUGCT | chr7 | 40887705 | 40887706 | rs10237052 | + | C | C/T | single | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.634747 |
SUGCT | chr7 | 40887744 | 40887745 | rs10266350 | + | A | A/G | single | intron | 12 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.692132 |
SUGCT | chr7 | 40887862 | 40887869 | rs112291991 | + | ACCTGGC | -/ACCTGGC | deletion | intron | 5 | 1000GENOMES,BUSHMAN,GMI,LUNTER,PJP, | 2 | 0.361009 |
SUGCT | chr7 | 40888048 | 40888049 | rs4050966 | + | G | A/G | single | intron | 18 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 2 | 0.460520 |
SUGCT | chr7 | 40888597 | 40888598 | rs3801239 | + | G | A/G | single | intron | 11 | 1000GENOMES,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.322171 |
SUGCT | chr7 | 40888933 | 40888934 | rs73689870 | + | T | C/T | single | intron | 7 | 1000GENOMES,BUSHMAN,GMI,ILLUMINA,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.095784 |
SUGCT | chr7 | 40889039 | 40889040 | rs6963162 | + | G | A/G | single | intron | 14 | 1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,PJP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.365253 |
SUGCT | chr7 | 40889555 | 40889556 | rs55836921 | + | C | C/T | single | intron | 5 | 1000GENOMES,GMI,HGSV,ILLUMINA-UK,SSMP, | 2 | 0.926147 |
SUGCT | chr7 | 40889984 | 40889985 | rs10226883 | + | G | A/G | single | intron | 13 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA,ILLUMINA-UK,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.461855 |
SUGCT | chr7 | 40890669 | 40890670 | rs10227436 | + | C | C/T | single | intron | 14 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.536252 |
SUGCT | chr7 | 40891125 | 40891126 | rs4085300 | - | G | C/T | single | intron | 14 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,PERLEGEN,SC_JCM,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 3 | 0.653313 |
SUGCT | chr7 | 40891259 | 40891260 | rs7806152 | + | C | C/T | single | intron | 7 | 1000GENOMES,AFFY,BUSHMAN,ILLUMINA,KRIBB_YJKIM,TISHKOFF,WI_SSAHASNP, | 2 | 0.987901 |
SUGCT | chr7 | 40891683 | 40891684 | rs10231596 | + | C | C/T | single | intron | 17 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,KRIBB_YJKIM,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.636502 |
SUGCT | chr7 | 40891811 | 40891812 | rs6957123 | + | T | G/T | single | intron | 16 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,KRIBB_YJKIM,PJP,SSMP,TISHKOFF, | 2 | 0.363359 |
SUGCT | chr7 | 40892227 | 40892228 | rs17714523 | + | G | G/T | single | intron | 6 | 1000GENOMES,BGI,BUSHMAN,GMI,ILLUMINA,PERLEGEN, | 2 | 0.951131 |
SUGCT | chr7 | 40892323 | 40892324 | rs17171784 | + | G | G/T | single | intron | 4 | 1000GENOMES,BUSHMAN,PERLEGEN,TISHKOFF, | 2 | 0.978036 |
SUGCT | chr7 | 40892727 | 40892728 | rs4723983 | + | A | A/G | single | intron | 18 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.533042 |
SUGCT | chr7 | 40892999 | 40893000 | rs4720383 | + | G | A/G | single | intron | 8 | 1000GENOMES,ABI,BGI,CSHL-HAPMAP,GMI,SSAHASNP,SSMP,WI_SSAHASNP, | 2 | 0.039450 |
SUGCT | chr7 | 40893274 | 40893275 | rs112783894 | + | C | C/T | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.977982 |
SUGCT | chr7 | 40893529 | 40893530 | rs56190843 | + | T | -/T | deletion | intron | 5 | 1000GENOMES,GMI,HGSV,LUNTER,SSMP, | 2 | 0.051883 |
SUGCT | chr7 | 40893994 | 40893998 | rs145101175 | + | TTTC | -/TTTC | deletion | intron | 1 | 1000GENOMES, | 2 | 0.113866 |
SUGCT | chr7 | 40894009 | 40894018 | rs200574362 | + | CTTTCTTTC | -/CTTTCTTTC | deletion | intron | 1 | 1000GENOMES, | 2 | 0.468779 |
SUGCT | chr7 | 40894013 | 40894018 | rs200124150 | + | CTTTC | -/CTTTC | deletion | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.480257 |
SUGCT | chr7 | 40894017 | 40894018 | rs72153686 | + | C | -/C | deletion | intron | 6 | 1000GENOMES,BILGI_BIOE,BUSHMAN,DEVINE_LAB,LUNTER,PJP, | 2 | 0.501835 |
SUGCT | chr7 | 40894082 | 40894083 | rs62449429 | + | C | C/T | single | intron | 3 | 1000GENOMES,BCMHGSC_JDW,ENSEMBL, | 2 | 0.960092 |
SUGCT | chr7 | 40894083 | 40894087 | rs150153135 | + | TCTT | -/TCTT | deletion | intron | 2 | 1000GENOMES,LUNTER, | 2 | 0.038108 |
SUGCT | chr7 | 40894100 | 40894104 | rs199847011 | + | CTTG | -/CTTG | deletion | intron | 1 | 1000GENOMES, | 2 | 0.031221 |
SUGCT | chr7 | 40894467 | 40894468 | rs6952729 | + | G | C/G | single | intron | 12 | 1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,SC_SNP,SSMP,TISHKOFF, | 2 | 0.311070 |
SUGCT | chr7 | 40894701 | 40894702 | rs1921751 | - | C | A/G | single | intron | 8 | 1000GENOMES,ABI,BGI,GMI,PERLEGEN,SC_JCM,SSMP,TSC-CSHL, | 2 | 0.037757 |
SUGCT | chr7 | 40895185 | 40895186 | rs17621508 | + | T | A/T | single | intron | 6 | 1000GENOMES,GMI,HGSV,ILLUMINA-UK,PERLEGEN,SSMP, | 2 | 0.075073 |
SUGCT | chr7 | 40896713 | 40896714 | rs10268023 | + | T | A/T | single | intron | 11 | 1000GENOMES,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,PERLEGEN,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.310997 |
SUGCT | chr7 | 40897003 | 40897004 | rs1203577 | + | T | C/T | single | intron | 8 | 1000GENOMES,AFFY,BCM_SSAHASNP,ILLUMINA,KRIBB_YJKIM,KWOK,SC_JCM,TISHKOFF, | 2 | 0.085264 |
SUGCT | chr7 | 40897266 | 40897267 | rs10255986 | + | C | C/T | single | intron | 15 | 1000GENOMES,AFFY,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.682119 |
SUGCT | chr7 | 40897975 | 40897976 | rs28583134 | + | T | C/T | single | intron | 9 | 1000GENOMES,BL,COMPLETE_GENOMICS,GMI,HGSV,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.311070 |
SUGCT | chr7 | 40898069 | 40898070 | rs17171785 | + | C | C/T | single | intron | 7 | 1000GENOMES,AFFY,BUSHMAN,ILLUMINA,KRIBB_YJKIM,PERLEGEN,TISHKOFF, | 2 | 0.971154 |
SUGCT | chr7 | 40898137 | 40898138 | rs1203578 | + | T | C/T | single | intron | 21 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.548742 |
SUGCT | chr7 | 40898681 | 40898681 | rs201150719 | + | - | -/A | insertion | intron | 2 | 1000GENOMES,LUNTER, | 2 | 0.981635 |
SUGCT | chr7 | 40899142 | 40899143 | rs73312299 | + | G | C/G | single | intron | 4 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.015110 |
SUGCT | chr7 | 40899645 | 40899646 | rs6971120 | + | T | C/T | single | intron | 17 | 1000GENOMES,ABI,AFFY,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.448091 |
SUGCT | chr7 | 40899651 | 40899652 | rs73689875 | + | C | C/T | single | intron | 6 | 1000GENOMES,BUSHMAN,GMI,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.904675 |
SUGCT | chr7 | 40899966 | 40899967 | rs2010706 | + | G | C/G | single | coding-synon | 22 | 1000GENOMES,ABI,APPLERA_GI,BCM_SSAHASNP,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,ILLUMINA-UK,NHLBI-ESP,PJP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP,WUGSC_SSAHASNP,YUSUKE, | 2 | 0.444095 |
SUGCT | chr7 | 40899987 | 40899988 | rs35870589 | + | G | A/G | single | coding-synon | 1 | APPLERA_GI, | 2 | 0.012820 |
SUGCT | chr7 | 40900174 | 40900175 | rs699484 | + | A | A/G | single | untranslated-3 | 21 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,LEE,PERLEGEN,PJP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP,YUSUKE, | 3 | 0.543920 |
SUGCT | chr7 | 40900229 | 40900230 | rs2302027 | + | G | A/G | single | untranslated-3 | 11 | 1000GENOMES,ABI,BGI,CSHL-HAPMAP,GMI,ILLUMINA,PERLEGEN,PJP,SSMP,WI_SSAHASNP,YUSUKE, | 2 | 0.035575 |
SUGCT | chr7 | 40900339 | 40900340 | rs1053953 | + | T | A/T | single | untranslated-3 | 18 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,ILLUMINA-UK,LEE,PJP,SSMP,TSC-CSHL,WI_SSAHASNP,WUGSC_SSAHASNP,YUSUKE, | 2 | 0.449474 |
TXNRD2 | chr22 | 19863141 | 19863142 | rs1044732 | - | T | A/G | single | untranslated-3 | 14 | 1000GENOMES,ABI,COMPLETE_GENOMICS,ENSEMBL,ILLUMINA,KRIBB_YJKIM,LEE,PERLEGEN,PJP,SEQUENOM,SI_EXO,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.910889 |
TXNRD2 | chr22 | 19863592 | 19863593 | rs16984299 | + | T | C/T | single | intron | 16 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.281693 |
TXNRD2 | chr22 | 19863613 | 19863614 | rs34207608 | + | G | A/G | single | intron | 8 | 1000GENOMES,ABI,BCM-HGSC-SUB,GMI,HUMANGENOME_JCVI,ILLUMINA,PJP,TISHKOFF, | 2 | 0.039450 |
TXNRD2 | chr22 | 19863637 | 19863638 | rs58210408 | + | C | C/T | single | intron | 7 | 1000GENOMES,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.796059 |
TXNRD2 | chr22 | 19863727 | 19863728 | rs113206516 | + | G | G/T | single | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA, | 2 | 0.954128 |
TXNRD2 | chr22 | 19863926 | 19863927 | rs80053274 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.035714 |
TXNRD2 | chr22 | 19864017 | 19864018 | rs116012329 | + | A | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.982578 |
TXNRD2 | chr22 | 19864071 | 19864072 | rs73877383 | + | G | A/G | single | intron | 3 | 1000GENOMES,ILLUMINA-UK,SSMP, | 2 | 0.024771 |
TXNRD2 | chr22 | 19864088 | 19864089 | rs67937222 | + | C | C/T | single | intron | 5 | 1000GENOMES,BCM-HGSC-SUB,COMPLETE_GENOMICS,HUMANGENOME_JCVI,TISHKOFF, | 2 | 0.962420 |
TXNRD2 | chr22 | 19864238 | 19864239 | rs7288061 | + | C | C/T | single | intron | 9 | 1000GENOMES,BCM-HGSC-SUB,BCM_SSAHASNP,COMPLETE_GENOMICS,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.915803 |
TXNRD2 | chr22 | 19864251 | 19864252 | rs7288170 | + | C | C/G | single | intron | 11 | 1000GENOMES,BCM-HGSC-SUB,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.735248 |
TXNRD2 | chr22 | 19864334 | 19864335 | rs7287073 | + | G | A/G | single | intron | 9 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,COMPLETE_GENOMICS,GMI,HUMANGENOME_JCVI,SSMP,TISHKOFF, | 2 | 0.086159 |
TXNRD2 | chr22 | 19864393 | 19864394 | rs73877384 | + | C | C/T | single | intron | 5 | 1000GENOMES,GMI,ILLUMINA,ILLUMINA-UK,SSMP, | 2 | 0.970642 |
TXNRD2 | chr22 | 19864959 | 19864960 | rs73381892 | + | C | C/T | single | intron | 3 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS, | 2 | 0.953297 |
TXNRD2 | chr22 | 19865128 | 19865129 | rs73877385 | + | A | A/G | single | intron | 4 | 1000GENOMES,ILLUMINA,ILLUMINA-UK,SSMP, | 2 | 0.969725 |
TXNRD2 | chr22 | 19865358 | 19865359 | rs16984300 | + | C | C/T | single | intron | 4 | 1000GENOMES,ILLUMINA,PERLEGEN,TISHKOFF, | 2 | 0.986207 |
TXNRD2 | chr22 | 19865868 | 19865869 | rs113605285 | + | T | C/T | single | intron | 6 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,ILLUMINA,NHLBI-ESP,TISHKOFF, | 2 | 0.082418 |
TXNRD2 | chr22 | 19866193 | 19866194 | rs5993849 | + | G | C/G | single | intron | 15 | 1000GENOMES,ABI,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_SNP,SI_EXO,SSMP,TISHKOFF, | 2 | 0.256843 |
TXNRD2 | chr22 | 19866461 | 19866462 | rs3827288 | + | C | C/T | single | intron | 11 | 1000GENOMES,ABI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,ILLUMINA,PERLEGEN,SC_SNP,SSMP,YUSUKE, | 2 | 0.743453 |
TXNRD2 | chr22 | 19866944 | 19866945 | rs79682614 | + | C | C/T | single | intron | 4 | 1000GENOMES,GMI,SSMP,TISHKOFF, | 2 | 0.907230 |
TXNRD2 | chr22 | 19867087 | 19867088 | rs150129323 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.021579 |
TXNRD2 | chr22 | 19867144 | 19867145 | rs138805648 | + | G | C/G | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.031221 |
TXNRD2 | chr22 | 19867188 | 19867189 | rs13054371 | + | T | C/T | single | intron | 13 | 1000GENOMES,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.545349 |
TXNRD2 | chr22 | 19867268 | 19867269 | rs35687671 | + | G | A/G | single | intron | 6 | 1000GENOMES,ABI,BCM-HGSC-SUB,COMPLETE_GENOMICS,ENSEMBL,HUMANGENOME_JCVI, | 2 | 0.031565 |
TXNRD2 | chr22 | 19867275 | 19867276 | rs34175429 | + | T | C/T | single | intron | 9 | 1000GENOMES,ABI,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,SSMP, | 2 | 0.251142 |
TXNRD2 | chr22 | 19867401 | 19867402 | rs117304417 | + | G | A/G | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.014360 |
TXNRD2 | chr22 | 19867468 | 19867469 | rs11913382 | + | A | A/G | single | intron | 4 | 1000GENOMES,ABI,CSHL-HAPMAP,ILLUMINA, | 2 | 0.988068 |
TXNRD2 | chr22 | 19867503 | 19867504 | rs76576226 | + | A | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.968206 |
TXNRD2 | chr22 | 19867538 | 19867539 | rs11913319 | + | C | C/G | single | intron | 9 | 1000GENOMES,ABI,BCM-HGSC-SUB,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HUMANGENOME_JCVI,SSMP,TISHKOFF, | 2 | 0.735588 |
TXNRD2 | chr22 | 19867770 | 19867771 | rs1139795 | - | C | A/G | single | coding-synon | 20 | 1000GENOMES,ABI,APPLERA_GI,BCM-HGSC-SUB,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,LEE,NHLBI-ESP,PJP,SEATTLESEQ,SEQUENOM,SI_EXO,SSMP,TISHKOFF, | 2 | 0.217342 |
TXNRD2 | chr22 | 19867913 | 19867914 | rs13054713 | + | C | A/C | single | intron | 12 | 1000GENOMES,ABI,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,HUMANGENOME_JCVI,PJP,SI_EXO,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.122129 |
TXNRD2 | chr22 | 19868217 | 19868218 | rs1139793 | + | A | A/G | single | missense | 31 | 1000GENOMES,AFFY,AFFY_GWHS,APPLERA_GI,BCMHGSC_JDW,BGI,BL,BUSHMAN,CGAP-GAI,CGM_KYOTO,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,EXOME_CHIP,GMI,HGBASE,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,LEE,NHLBI-ESP,PERLEGEN,PJP,SC_SNP,SEATTLESEQ,SSAHASNP,SSMP,TISHKOFF,YUSUKE, | 5 | 0.247231 |
TXNRD2 | chr22 | 19868227 | 19868228 | rs35544159 | - | G | C/T | single | coding-synon | 6 | 1000GENOMES,APPLERA_GI,CLINSEQ_SNP,ILLUMINA-UK,NHLBI-ESP,SEATTLESEQ, | 2 | 0.986312 |
TXNRD2 | chr22 | 19868255 | 19868256 | rs34827823 | + | G | -/G | deletion | intron | 9 | 1000GENOMES,ABI,BUSHMAN,CGM_KYOTO,DEVINE_LAB,GMI,LUNTER,SSMP,TISHKOFF, | 2 | 0.157798 |
TXNRD2 | chr22 | 19868552 | 19868553 | rs34489078 | + | G | A/G | single | intron | 7 | 1000GENOMES,ABI,BCM-HGSC-SUB,COMPLETE_GENOMICS,GMI,SI_EXO,TISHKOFF, | 2 | 0.036697 |
TXNRD2 | chr22 | 19868677 | 19868678 | rs45465601 | + | T | C/T | single | intron | 13 | 1000GENOMES,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,PJP,SI_EXO,SSMP,TISHKOFF, | 2 | 0.249429 |
TXNRD2 | chr22 | 19868684 | 19868685 | rs115189901 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.010017 |
TXNRD2 | chr22 | 19868925 | 19868926 | rs34318203 | + | G | -/G | deletion | intron | 10 | 1000GENOMES,ABI,BILGI_BIOE,BUSHMAN,DEVINE_LAB,HGSV,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 0.249771 |
TXNRD2 | chr22 | 19868950 | 19868951 | rs33997573 | + | C | C/T | single | intron | 11 | 1000GENOMES,ABI,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,HGSV,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.872263 |
TXNRD2 | chr22 | 19869024 | 19869025 | rs75598332 | + | C | A/C | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.010017 |
TXNRD2 | chr22 | 19869209 | 19869210 | rs34820460 | + | G | A/G | single | intron | 13 | 1000GENOMES,ABI,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSMP,TISHKOFF, | 2 | 0.197812 |
TXNRD2 | chr22 | 19869262 | 19869263 | rs16984307 | + | T | G/T | single | intron | 5 | 1000GENOMES,AFFY,KRIBB_YJKIM,PERLEGEN,TISHKOFF, | 2 | 0.074401 |
TXNRD2 | chr22 | 19869303 | 19869304 | rs60832012 | + | C | C/T | single | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,HGSV,TISHKOFF, | 2 | 0.989450 |
TXNRD2 | chr22 | 19869450 | 19869451 | rs114311075 | + | C | C/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.975174 |
TXNRD2 | chr22 | 19869604 | 19869605 | rs76038805 | + | G | G/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.989983 |
TXNRD2 | chr22 | 19869702 | 19869703 | rs5993850 | + | C | C/T | single | intron | 12 | 1000GENOMES,ABI,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA-UK,KRIBB_YJKIM,SC_SNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.764135 |
TXNRD2 | chr22 | 19869845 | 19869846 | rs112313554 | + | C | C/T | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.987156 |
TXNRD2 | chr22 | 19869941 | 19869942 | rs138288542 | + | G | G/T | single | intron | 1 | 1000GENOMES, | 2 | 0.979339 |
TXNRD2 | chr22 | 19870035 | 19870036 | rs8141451 | + | C | C/G | single | intron | 13 | 1000GENOMES,ABI,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.749315 |
TXNRD2 | chr22 | 19870059 | 19870060 | rs75996154 | + | C | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.986934 |
TXNRD2 | chr22 | 19870060 | 19870061 | rs35951399 | + | G | A/G | single | intron | 7 | 1000GENOMES,ABI,BCM-HGSC-SUB,COMPLETE_GENOMICS,GMI,HUMANGENOME_JCVI,TISHKOFF, | 2 | 0.037122 |
TXNRD2 | chr22 | 19870071 | 19870072 | rs73383820 | + | C | C/T | single | intron | 4 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.982593 |
TXNRD2 | chr22 | 19870146 | 19870147 | rs8141610 | + | C | C/T | single | intron | 13 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.872098 |
TXNRD2 | chr22 | 19870330 | 19870331 | rs73383823 | + | A | A/G | single | intron | 2 | 1000GENOMES,COMPLETE_GENOMICS, | 2 | 0.989450 |
TXNRD2 | chr22 | 19870830 | 19870831 | rs2239893 | - | C | A/G | single | intron | 19 | 1000GENOMES,ABI,BCM-HGSC-SUB,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PJP,SC_SNP,SI_EXO,SSAHASNP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.237776 |
TXNRD2 | chr22 | 19870897 | 19870898 | rs61736941 | + | G | A/G | single | missense | 2 | CORNELL,NHLBI-ESP, | 2 | 0.013513 |
TXNRD2 | chr22 | 19871096 | 19871097 | rs13057374 | + | C | C/G | single | intron | 12 | ABI,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.428571 |
TXNRD2 | chr22 | 19871197 | 19871198 | rs114054391 | + | C | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.971690 |
TXNRD2 | chr22 | 19871203 | 19871204 | rs5992492 | + | T | C/T | single | intron | 14 | 1000GENOMES,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.508204 |
TXNRD2 | chr22 | 19871473 | 19871473 | rs200781717 | + | - | -/AG | insertion | intron | 1 | 1000GENOMES, | 2 | 0.952709 |
TXNRD2 | chr22 | 19871552 | 19871553 | rs5993851 | + | C | C/T | single | intron | 11 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.751601 |
TXNRD2 | chr22 | 19871553 | 19871554 | rs139656382 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.016529 |
TXNRD2 | chr22 | 19871601 | 19871602 | rs149740582 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.014233 |
TXNRD2 | chr22 | 19871690 | 19871691 | rs12158214 | + | C | C/T | single | intron | 16 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,HUMANGENOME_JCVI,KRIBB_YJKIM,PERLEGEN,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.804560 |
TXNRD2 | chr22 | 19871777 | 19871778 | rs3788305 | + | A | A/G | single | intron | 21 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,YUSUKE, | 3 | 0.460524 |
TXNRD2 | chr22 | 19872008 | 19872009 | rs3788306 | + | T | C/T | single | intron | 18 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SC_SNP,SSMP,TISHKOFF,WI_SSAHASNP,YUSUKE, | 3 | 0.238701 |
TXNRD2 | chr22 | 19872166 | 19872167 | rs75188079 | + | C | A/C | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.053525 |
TXNRD2 | chr22 | 19872169 | 19872170 | rs34249993 | + | G | G/T | single | intron | 10 | 1000GENOMES,ABI,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,HUMANGENOME_JCVI,SSMP,TISHKOFF, | 2 | 0.875799 |
TXNRD2 | chr22 | 19872644 | 19872645 | rs35934224 | + | C | C/T | single | intron | 11 | 1000GENOMES,ABI,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.827397 |
TXNRD2 | chr22 | 19872934 | 19872935 | rs73148965 | + | G | A/G | single | intron | 7 | 1000GENOMES,BCM-HGSC-SUB,COMPLETE_GENOMICS,ENSEMBL,GMI,SSMP,TISHKOFF, | 2 | 0.085243 |
TXNRD2 | chr22 | 19872997 | 19872998 | rs35942596 | + | T | -/T | deletion | intron | 7 | 1000GENOMES,ABI,DEVINE_LAB,HUMANGENOME_JCVI,LUNTER,SSMP,TISHKOFF, | 2 | 0.183486 |
TXNRD2 | chr22 | 19873356 | 19873357 | rs2073750 | - | C | A/G | single | intron | 18 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGBASE,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SC_SNP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.406294 |
TXNRD2 | chr22 | 19873605 | 19873606 | rs117016540 | + | C | C/T | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.988686 |
TXNRD2 | chr22 | 19873796 | 19873797 | rs56046137 | + | G | A/G | single | intron | 9 | 1000GENOMES,BCMHGSC_JDW,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF, | 2 | 0.166209 |
TXNRD2 | chr22 | 19874181 | 19874182 | rs73877387 | + | C | C/T | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.969725 |
TXNRD2 | chr22 | 19874208 | 19874209 | rs9606171 | + | T | C/T | single | intron | 7 | 1000GENOMES,AFFY,GMI,KRIBB_YJKIM,SC_SNP,SSMP,TISHKOFF, | 2 | 0.108535 |
TXNRD2 | chr22 | 19874484 | 19874485 | rs9606172 | + | G | A/G | single | intron | 2 | 1000GENOMES,SC_SNP, | 2 | 0.026980 |
TXNRD2 | chr22 | 19874545 | 19874546 | rs73383845 | + | C | C/T | single | intron | 4 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.984876 |
TXNRD2 | chr22 | 19874717 | 19874718 | rs73877388 | + | G | A/G | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.031651 |
TXNRD2 | chr22 | 19874755 | 19874756 | rs34468574 | + | C | C/T | single | intron | 10 | 1000GENOMES,ABI,BCM-HGSC-SUB,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,PJP,TISHKOFF, | 2 | 0.956084 |
TXNRD2 | chr22 | 19874954 | 19874955 | rs117446426 | + | C | C/T | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.988686 |
TXNRD2 | chr22 | 19875094 | 19875095 | rs79954504 | + | C | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.979530 |
TXNRD2 | chr22 | 19875421 | 19875422 | rs9618712 | + | C | C/T | single | intron | 7 | 1000GENOMES,AFFY,BUSHMAN,KRIBB_YJKIM,PERLEGEN,SC_SNP,TISHKOFF, | 2 | 0.958171 |
TXNRD2 | chr22 | 19876332 | 19876333 | rs73877389 | + | G | A/G | single | intron | 5 | 1000GENOMES,GMI,ILLUMINA,ILLUMINA-UK,SSMP, | 2 | 0.030734 |
TXNRD2 | chr22 | 19876766 | 19876767 | rs113109341 | + | C | C/T | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.982110 |
TXNRD2 | chr22 | 19876860 | 19876861 | rs11089317 | + | T | C/T | single | intron | 15 | 1000GENOMES,ABI,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,PJP,SC_SNP,SSAHASNP,SSMP, | 2 | 0.300913 |
TXNRD2 | chr22 | 19876996 | 19876997 | rs12106645 | + | G | A/G | single | intron | 3 | 1000GENOMES,BUSHMAN,SC_SNP, | 2 | 0.084862 |
TXNRD2 | chr22 | 19877048 | 19877049 | rs34970138 | + | G | A/G | single | intron | 10 | 1000GENOMES,ABI,BCM-HGSC-SUB,BL,BUSHMAN,ENSEMBL,GMI,HUMANGENOME_JCVI,SSMP,TISHKOFF, | 2 | 0.167429 |
TXNRD2 | chr22 | 19877175 | 19877175 | rs59971562 | + | - | -/TT/TTATTA | insertion | intron,cds-indel | 2 | 1000GENOMES,HGSV, | 2 | 0.925620 |
TXNRD2 | chr22 | 19877510 | 19877511 | rs9606173 | + | A | A/T | single | intron | 13 | 1000GENOMES,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,PJP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.822290 |
TXNRD2 | chr22 | 19877752 | 19877753 | rs116474580 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.051829 |
TXNRD2 | chr22 | 19877760 | 19877761 | rs56114807 | + | C | C/T | single | intron | 5 | 1000GENOMES,GMI,HGSV,ILLUMINA-UK,SSMP, | 2 | 0.970183 |
TXNRD2 | chr22 | 19877856 | 19877857 | rs34606353 | + | T | C/T | single | intron | 7 | 1000GENOMES,ABI,BCM-HGSC-SUB,BUSHMAN,GMI,HUMANGENOME_JCVI,TISHKOFF, | 2 | 0.040788 |
TXNRD2 | chr22 | 19878008 | 19878009 | rs9617844 | + | G | A/G | single | intron | 4 | 1000GENOMES,HGSV,SC_SNP,TISHKOFF, | 2 | 0.033972 |
TXNRD2 | chr22 | 19878361 | 19878362 | rs1548357 | + | T | C/T | single | intron | 17 | 1000GENOMES,ABI,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PJP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP,YUSUKE, | 2 | 0.316529 |
TXNRD2 | chr22 | 19878513 | 19878514 | rs1015471 | - | G | C/T | single | intron | 13 | 1000GENOMES,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA,KRIBB_YJKIM,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP,YUSUKE, | 2 | 0.668192 |
TXNRD2 | chr22 | 19878542 | 19878543 | rs73877390 | + | G | C/G | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.031193 |
TXNRD2 | chr22 | 19878751 | 19878752 | rs3827289 | + | A | A/T | single | intron | 13 | 1000GENOMES,ABI,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,ILLUMINA,PJP,SSMP,TISHKOFF,WI_SSAHASNP,YUSUKE, | 2 | 0.658087 |
TXNRD2 | chr22 | 19879019 | 19879020 | rs3788309 | + | G | A/G | single | intron | 8 | 1000GENOMES,AFFY,GMI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,SSMP,YUSUKE, | 2 | 0.040010 |
TXNRD2 | chr22 | 19879597 | 19879598 | rs79062175 | + | C | C/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.960801 |
TXNRD2 | chr22 | 19879636 | 19879637 | rs3804047 | - | A | C/T | single | intron | 12 | 1000GENOMES,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,SC_SNP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.342472 |
TXNRD2 | chr22 | 19879937 | 19879938 | rs5993853 | + | T | C/T | single | intron | 20 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.857486 |
TXNRD2 | chr22 | 19880056 | 19880057 | rs56132768 | + | G | C/G | single | intron | 8 | 1000GENOMES,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.206960 |
TXNRD2 | chr22 | 19880254 | 19880255 | rs74746057 | + | G | C/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.037892 |
TXNRD2 | chr22 | 19880339 | 19880340 | rs3788310 | + | G | A/G | single | intron | 9 | 1000GENOMES,BL,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SC_SNP,SSMP,YUSUKE, | 2 | 0.095144 |
TXNRD2 | chr22 | 19880820 | 19880821 | rs34553125 | + | G | G/T | single | intron | 9 | 1000GENOMES,ABI,BCMHGSC_JDW,ENSEMBL,HUMANGENOME_JCVI,ILLUMINA,PJP,SSMP,TISHKOFF, | 2 | 0.928571 |
TXNRD2 | chr22 | 19880917 | 19880918 | rs115629693 | + | A | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.989111 |
TXNRD2 | chr22 | 19881026 | 19881027 | rs4819845 | + | C | C/T | single | intron | 22 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.123955 |
TXNRD2 | chr22 | 19881277 | 19881278 | rs112871419 | + | G | A/G | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.013761 |
TXNRD2 | chr22 | 19881320 | 19881321 | rs56312415 | + | G | A/G | single | intron | 6 | 1000GENOMES,GMI,HGSV,ILLUMINA,ILLUMINA-UK,SSMP, | 2 | 0.028899 |
TXNRD2 | chr22 | 19881555 | 19881556 | rs5992493 | + | A | A/G | single | intron | 18 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.728906 |
TXNRD2 | chr22 | 19881825 | 19881826 | rs5993854 | + | A | A/G | single | intron | 9 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,ILLUMINA,PJP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.804218 |
TXNRD2 | chr22 | 19881887 | 19881888 | rs117638280 | + | C | C/T | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.983029 |
TXNRD2 | chr22 | 19882114 | 19882115 | rs5993855 | + | A | A/G | single | intron | 12 | 1000GENOMES,BCMHGSC_JDW,BUSHMAN,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.780979 |
TXNRD2 | chr22 | 19882201 | 19882202 | rs79388039 | + | T | C/T | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.027982 |
TXNRD2 | chr22 | 19882629 | 19882630 | rs5993856 | + | G | A/G | single | intron | 16 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,NHLBI-ESP,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.225423 |
TXNRD2 | chr22 | 19882887 | 19882888 | rs5992494 | + | G | A/G | single | intron | 8 | 1000GENOMES,BUSHMAN,CLINSEQ_SNP,HGSV,ILLUMINA,NHLBI-ESP,SC_SNP,TISHKOFF, | 2 | 0.078548 |
TXNRD2 | chr22 | 19882983 | 19882984 | rs5992495 | + | T | G/T | single | missense | 20 | 1000GENOMES,ABI,AFFY,BUSHMAN,CLINSEQ_SNP,CORNELL,ENSEMBL,EXOME_CHIP,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,NHLBI-ESP,PJP,SC_SNP,SEATTLESEQ,SSMP,TISHKOFF, | 2 | 0.232925 |
TXNRD2 | chr22 | 19883188 | 19883189 | rs78239309 | + | A | A/G | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.942202 |
TXNRD2 | chr22 | 19883853 | 19883857 | rs113617906 | + | CAAC | -/CAAC | deletion | intron | 5 | 1000GENOMES,BILGI_BIOE,BUSHMAN,SSMP,TSC-CSHL, | 2 | 0.198624 |
TXNRD2 | chr22 | 19883856 | 19883857 | rs60113833 | + | C | A/C | single | intron | 11 | 1000GENOMES,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP,TISHKOFF, | 2 | 0.985845 |
TXNRD2 | chr22 | 19884038 | 19884039 | rs879033 | - | C | G/T | single | intron | 11 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,ENSEMBL,GMI,ILLUMINA-UK,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.776201 |
TXNRD2 | chr22 | 19884210 | 19884211 | rs879032 | - | C | A/G | single | intron | 5 | 1000GENOMES,ABI,ILLUMINA,TISHKOFF,TSC-CSHL, | 2 | 0.014337 |
TXNRD2 | chr22 | 19884382 | 19884383 | rs62222121 | + | G | A/G | single | intron | 7 | 1000GENOMES,BCMHGSC_JDW,ENSEMBL,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.096700 |
TXNRD2 | chr22 | 19884656 | 19884657 | rs732262 | - | C | A/G | single | intron | 11 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA,KRIBB_YJKIM,SSMP,TISHKOFF,TSC-CSHL,YUSUKE, | 4 | 0.129340 |
TXNRD2 | chr22 | 19884868 | 19884869 | rs34433782 | + | A | A/G | single | intron | 8 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.880843 |
TXNRD2 | chr22 | 19885027 | 19885028 | rs12168841 | + | G | A/G | single | intron | 12 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.225674 |
TXNRD2 | chr22 | 19885547 | 19885548 | rs12169091 | + | G | G/T | single | intron | 14 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,NHLBI-ESP,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.774828 |
TXNRD2 | chr22 | 19885975 | 19885976 | rs62222122 | + | C | C/T | single | intron | 10 | 1000GENOMES,BCMHGSC_JDW,BUSHMAN,ENSEMBL,GMI,ILLUMINA,ILLUMINA-UK,PJP,SSMP,TISHKOFF, | 2 | 0.808608 |
TXNRD2 | chr22 | 19886026 | 19886027 | rs150780171 | + | T | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.035813 |
TXNRD2 | chr22 | 19886442 | 19886443 | rs76692419 | + | G | A/G | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.041770 |
TXNRD2 | chr22 | 19886796 | 19886797 | rs8142006 | + | G | A/G | single | intron | 11 | 1000GENOMES,BCMHGSC_JDW,BUSHMAN,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.193504 |
TXNRD2 | chr22 | 19887349 | 19887350 | rs3788312 | + | A | A/T | single | intron | 8 | 1000GENOMES,AFFY,BUSHMAN,GMI,PERLEGEN,SSMP,TISHKOFF,YUSUKE, | 2 | 0.872308 |
TXNRD2 | chr22 | 19887375 | 19887376 | rs3788313 | + | A | A/G | single | intron | 6 | 1000GENOMES,ILLUMINA,KRIBB_YJKIM,SSMP,WI_SSAHASNP,YUSUKE, | 2 | 0.955471 |
TXNRD2 | chr22 | 19887768 | 19887769 | rs58882338 | + | C | A/C | single | intron | 4 | 1000GENOMES,HGSV,ILLUMINA-UK,SSMP, | 2 | 0.027982 |
TXNRD2 | chr22 | 19887781 | 19887782 | rs80354202 | + | C | A/C | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.044425 |
TXNRD2 | chr22 | 19887812 | 19887813 | rs56751524 | + | G | G/T | single | intron | 5 | 1000GENOMES,GMI,HGSV,ILLUMINA,SSMP, | 2 | 0.968454 |
TXNRD2 | chr22 | 19887843 | 19887844 | rs35646899 | + | G | A/G | single | intron | 5 | 1000GENOMES,ABI,BUSHMAN,ENSEMBL,TISHKOFF, | 2 | 0.162546 |
TXNRD2 | chr22 | 19887846 | 19887847 | rs35061565 | + | C | A/C | single | intron | 8 | 1000GENOMES,ABI,BUSHMAN,ENSEMBL,GMI,HGSV,SSMP,TISHKOFF, | 2 | 0.190018 |
TXNRD2 | chr22 | 19887899 | 19887900 | rs140902769 | + | G | C/G | single | intron | 1 | 1000GENOMES, | 2 | 0.015611 |
TXNRD2 | chr22 | 19888097 | 19888098 | rs58923483 | + | C | C/T | single | intron | 3 | 1000GENOMES,HGSV,SSMP, | 2 | 0.972452 |
TXNRD2 | chr22 | 19888100 | 19888101 | rs34270376 | + | A | A/G | single | intron | 9 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,ENSEMBL,HGSV,PJP,SSMP,TISHKOFF, | 2 | 0.799725 |
TXNRD2 | chr22 | 19888145 | 19888146 | rs34639306 | + | G | A/G | single | intron | 10 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,ENSEMBL,GMI,HGSV,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.190476 |
TXNRD2 | chr22 | 19888554 | 19888555 | rs56028119 | + | G | A/G | single | intron | 4 | 1000GENOMES,HGSV,ILLUMINA-UK,SSMP, | 2 | 0.023853 |
TXNRD2 | chr22 | 19888727 | 19888728 | rs112011114 | + | G | A/G | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.014227 |
TXNRD2 | chr22 | 19888859 | 19888860 | rs113083848 | + | C | A/C | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.018807 |
TXNRD2 | chr22 | 19889174 | 19889175 | rs7289412 | + | C | C/T | single | intron | 3 | 1000GENOMES,BCM_SSAHASNP,TISHKOFF, | 2 | 0.985691 |
TXNRD2 | chr22 | 19889366 | 19889367 | rs56892289 | + | G | C/G | single | intron | 5 | 1000GENOMES,GMI,HGSV,ILLUMINA-UK,SSMP, | 2 | 0.028899 |
TXNRD2 | chr22 | 19889422 | 19889423 | rs3788314 | + | G | A/G | single | intron | 18 | 1000GENOMES,ABI,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SC_SNP,SSMP,TISHKOFF,YUSUKE, | 3 | 0.560289 |
TXNRD2 | chr22 | 19889490 | 19889491 | rs3788315 | + | G | A/G | single | intron | 6 | 1000GENOMES,BCM-HGSC-SUB,GMI,SC_SNP,SSMP,YUSUKE, | 2 | 0.186120 |
TXNRD2 | chr22 | 19889634 | 19889635 | rs3788316 | + | A | A/G | single | intron | 9 | 1000GENOMES,BUSHMAN,GMI,HGSV,PJP,SC_SNP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.768103 |
TXNRD2 | chr22 | 19889824 | 19889825 | rs3788317 | + | G | G/T | single | intron | 17 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SC_SNP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.693182 |
TXNRD2 | chr22 | 19890405 | 19890406 | rs74953411 | + | T | G/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.034408 |
TXNRD2 | chr22 | 19890471 | 19890472 | rs115303693 | + | C | C/T | single | intron | 4 | 1000GENOMES,ILLUMINA,NHLBI-ESP,TISHKOFF, | 2 | 0.989111 |
TXNRD2 | chr22 | 19891394 | 19891395 | rs9605027 | + | C | C/T | single | intron | 10 | 1000GENOMES,BGI,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,PJP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.628440 |
TXNRD2 | chr22 | 19891457 | 19891458 | rs73877392 | + | A | A/G | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.966972 |
TXNRD2 | chr22 | 19891654 | 19891655 | rs115839620 | + | G | G/T | single | intron | 1 | 1000GENOMES, | 2 | 0.989111 |
TXNRD2 | chr22 | 19891697 | 19891698 | rs74478331 | + | C | C/T | single | intron | 7 | 1000GENOMES,BL,BUSHMAN,GMI,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.862907 |
TXNRD2 | chr22 | 19891716 | 19891717 | rs58952190 | + | T | C/T | single | intron | 5 | 1000GENOMES,GMI,HGSV,ILLUMINA-UK,SSMP, | 2 | 0.033028 |
TXNRD2 | chr22 | 19891755 | 19891756 | rs35681796 | + | T | -/T | deletion | intron | 6 | 1000GENOMES,ABI,GMI,HUMANGENOME_JCVI,LUNTER,TISHKOFF, | 2 | 0.044037 |
TXNRD2 | chr22 | 19891934 | 19891935 | rs10427571 | + | G | A/G | single | intron | 3 | 1000GENOMES,BCM_SSAHASNP,TISHKOFF, | 2 | 0.023955 |
TXNRD2 | chr22 | 19892049 | 19892050 | rs55655113 | + | T | C/T | single | intron | 5 | 1000GENOMES,GMI,HGSV,ILLUMINA-UK,SSMP, | 2 | 0.033028 |
TXNRD2 | chr22 | 19892106 | 19892107 | rs4819846 | + | T | G/T | single | intron | 10 | 1000GENOMES,BGI,COMPLETE_GENOMICS,GMI,HGSV,PJP,SC_SNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.373511 |
TXNRD2 | chr22 | 19892131 | 19892132 | rs58170165 | + | A | A/G | single | intron | 4 | 1000GENOMES,HGSV,ILLUMINA-UK,SSMP, | 2 | 0.965596 |
TXNRD2 | chr22 | 19892233 | 19892234 | rs73877395 | + | G | A/G | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.027982 |
TXNRD2 | chr22 | 19892321 | 19892322 | rs737863 | - | G | C/G | single | intron | 11 | 1000GENOMES,ABI,BCM_SSAHASNP,BL,GMI,ILLUMINA,ILLUMINA-UK,SC_SNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.738532 |
TXNRD2 | chr22 | 19892330 | 19892331 | rs737862 | - | G | C/G | single | intron | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,KRIBB_YJKIM,PJP,SC_SNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.330283 |
TXNRD2 | chr22 | 19892769 | 19892770 | rs78431207 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.037892 |
TXNRD2 | chr22 | 19892916 | 19892917 | rs7290255 | + | G | A/G | single | intron | 9 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,ENSEMBL,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.078297 |
TXNRD2 | chr22 | 19893035 | 19893036 | rs116182994 | + | C | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.968641 |
TXNRD2 | chr22 | 19893079 | 19893080 | rs9606174 | + | A | A/G | single | intron | 7 | 1000GENOMES,BL,BUSHMAN,ILLUMINA-UK,SC_SNP,SSMP,TISHKOFF, | 2 | 0.763158 |
TXNRD2 | chr22 | 19893259 | 19893260 | rs57323478 | + | C | C/T | single | intron | 2 | 1000GENOMES,HGSV, | 2 | 0.986498 |
TXNRD2 | chr22 | 19893413 | 19893414 | rs34140079 | + | G | A/G | single | intron | 4 | 1000GENOMES,ABI,HUMANGENOME_JCVI,ILLUMINA, | 2 | 0.010082 |
TXNRD2 | chr22 | 19893492 | 19893493 | rs73877396 | + | A | A/C | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.966972 |
TXNRD2 | chr22 | 19893723 | 19893724 | rs73877397 | + | T | C/T | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.033028 |
TXNRD2 | chr22 | 19893754 | 19893755 | rs73877398 | + | T | C/T | single | intron | 5 | 1000GENOMES,GMI,ILLUMINA,ILLUMINA-UK,SSMP, | 2 | 0.033028 |
TXNRD2 | chr22 | 19893779 | 19893780 | rs1858772 | + | G | C/G/T | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PERLEGEN,PJP,SC_SNP,TISHKOFF,TSC-CSHL, | 2 | 0.742182 |
TXNRD2 | chr22 | 19894017 | 19894018 | rs76320614 | + | G | A/G | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.032599 |
TXNRD2 | chr22 | 19894022 | 19894023 | rs1858773 | + | T | G/T | single | intron | 10 | 1000GENOMES,ABI,BL,BUSHMAN,GMI,KRIBB_YJKIM,SC_SNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.143888 |
TXNRD2 | chr22 | 19894083 | 19894084 | rs115585146 | + | G | G/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.955575 |
TXNRD2 | chr22 | 19894130 | 19894131 | rs79956748 | + | C | A/C | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.032110 |
TXNRD2 | chr22 | 19894150 | 19894150 | rs144233043 | + | - | -/AAA | insertion | cds-indel | 4 | 1000GENOMES,GMI,LUNTER,SSMP, | 2 | 0.967401 |
TXNRD2 | chr22 | 19894312 | 19894313 | rs73877400 | + | A | A/G | single | intron | 5 | 1000GENOMES,GMI,ILLUMINA,ILLUMINA-UK,SSMP, | 2 | 0.966972 |
TXNRD2 | chr22 | 19894347 | 19894348 | rs78301360 | + | C | C/T | single | intron | 2 | 1000GENOMES,GMI, | 2 | 0.979094 |
TXNRD2 | chr22 | 19894383 | 19894384 | rs5993858 | + | C | C/T | single | intron | 3 | 1000GENOMES,BCM_SSAHASNP,SC_SNP, | 2 | 0.971534 |
TXNRD2 | chr22 | 19894422 | 19894423 | rs79995555 | + | C | C/T | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.962810 |
TXNRD2 | chr22 | 19894448 | 19894449 | rs150337947 | + | A | A/C | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.973370 |
TXNRD2 | chr22 | 19894581 | 19894582 | rs149586631 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.032140 |
TXNRD2 | chr22 | 19894975 | 19894976 | rs62222126 | + | G | A/G | single | intron | 4 | 1000GENOMES,BCMHGSC_JDW,GMI,SSMP, | 2 | 0.031680 |
TXNRD2 | chr22 | 19894981 | 19894982 | rs62222128 | + | A | A/G/T | single | intron | 6 | 1000GENOMES,BCMHGSC_JDW,COMPLETE_GENOMICS,ENSEMBL,GMI,SSMP, | 2 | 0.821723 |
TXNRD2 | chr22 | 19895130 | 19895131 | rs73148970 | + | C | C/T | single | intron | 6 | 1000GENOMES,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI, | 2 | 0.519011 |
TXNRD2 | chr22 | 19895330 | 19895331 | rs10222209 | + | A | A/G | single | intron | 6 | 1000GENOMES,BCMHGSC_JDW,ENSEMBL,HUMANGENOME_JCVI,PJP,WUGSC_SSAHASNP, | 2 | 0.672319 |
TXNRD2 | chr22 | 19895356 | 19895357 | rs112206580 | + | G | A/G | single | intron | 3 | 1000GENOMES,BUSHMAN,SSMP, | 2 | 0.146789 |
TXNRD2 | chr22 | 19895372 | 19895373 | rs112587800 | + | A | A/G | single | intron | 2 | 1000GENOMES,COMPLETE_GENOMICS, | 2 | 0.885780 |
TXNRD2 | chr22 | 19895447 | 19895448 | rs10222210 | + | A | A/G | single | intron | 9 | 1000GENOMES,ABI,BGI,BL,ENSEMBL,GMI,HUMANGENOME_JCVI,SSMP,WUGSC_SSAHASNP, | 2 | 0.306141 |
TXNRD2 | chr22 | 19895574 | 19895575 | rs9606175 | + | T | G/T | single | intron | 3 | 1000GENOMES,SC_SNP,SSMP, | 2 | 0.149219 |
TXNRD2 | chr22 | 19895727 | 19895728 | rs35221258 | + | A | A/C | single | intron | 8 | 1000GENOMES,ABI,BCMHGSC_JDW,COMPLETE_GENOMICS,ENSEMBL,HUMANGENOME_JCVI,PJP,SSMP, | 2 | 0.909341 |
TXNRD2 | chr22 | 19895883 | 19895884 | rs60860719 | + | G | G/T | single | intron | 5 | 1000GENOMES,GMI,HGSV,ILLUMINA-UK,SSMP, | 2 | 0.972936 |
TXNRD2 | chr22 | 19896128 | 19896129 | rs61358034 | + | A | A/T | single | intron | 5 | 1000GENOMES,GMI,HGSV,ILLUMINA-UK,SSMP, | 2 | 0.971101 |
TXNRD2 | chr22 | 19896134 | 19896135 | rs9618714 | + | A | A/C | single | intron | 5 | 1000GENOMES,HGSV,PJP,SC_SNP,TISHKOFF, | 2 | 0.958716 |
TXNRD2 | chr22 | 19896448 | 19896449 | rs60421292 | + | T | C/T | single | intron | 5 | 1000GENOMES,GMI,HGSV,ILLUMINA-UK,SSMP, | 2 | 0.033028 |
TXNRD2 | chr22 | 19896508 | 19896509 | rs5993863 | + | C | A/C | single | intron | 5 | 1000GENOMES,GMI,SC_SNP,SSMP,TISHKOFF, | 2 | 0.163912 |
TXNRD2 | chr22 | 19896528 | 19896529 | rs60394271 | + | A | A/G | single | intron | 3 | 1000GENOMES,HGSV,SSMP, | 2 | 0.968779 |
TXNRD2 | chr22 | 19896556 | 19896557 | rs58879524 | + | A | A/G | single | intron | 3 | 1000GENOMES,HGSV,SSMP, | 2 | 0.966483 |
TXNRD2 | chr22 | 19896570 | 19896571 | rs5993864 | + | C | C/T | single | intron | 16 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.255825 |
TXNRD2 | chr22 | 19896613 | 19896614 | rs9617848 | + | G | A/G | single | intron | 3 | 1000GENOMES,SC_SNP,TISHKOFF, | 2 | 0.040826 |
TXNRD2 | chr22 | 19896614 | 19896615 | rs5748465 | + | G | A/G | single | intron | 9 | 1000GENOMES,ABI,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,PJP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.365138 |
TXNRD2 | chr22 | 19896652 | 19896653 | rs185377077 | + | C | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.988062 |
TXNRD2 | chr22 | 19896653 | 19896654 | rs189774969 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.010101 |
TXNRD2 | chr22 | 19896660 | 19896661 | rs58299207 | + | A | A/G | single | intron | 3 | 1000GENOMES,HGSV,SSMP, | 2 | 0.969238 |
TXNRD2 | chr22 | 19896732 | 19896733 | rs141503692 | + | A | A/C | single | intron | 1 | 1000GENOMES, | 2 | 0.970615 |
TXNRD2 | chr22 | 19896771 | 19896772 | rs73877401 | + | T | C/T | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.033028 |
TXNRD2 | chr22 | 19896967 | 19896969 | rs139624194 | + | AA | -/AA | deletion | intron | 4 | 1000GENOMES,GMI,LUNTER,SSMP, | 2 | 0.021579 |
TXNRD2 | chr22 | 19897442 | 19897444 | rs140145073 | + | CA | -/CA | deletion | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.357208 |
TXNRD2 | chr22 | 19897565 | 19897566 | rs73877402 | + | A | A/G | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.966972 |
TXNRD2 | chr22 | 19897607 | 19897608 | rs73880003 | + | C | A/C | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.033028 |
TXNRD2 | chr22 | 19897656 | 19897657 | rs12170324 | + | T | C/T | single | intron | 4 | 1000GENOMES,HGSV,SC_SNP,TISHKOFF, | 2 | 0.032110 |
TXNRD2 | chr22 | 19897895 | 19897896 | rs16982751 | + | A | A/C | single | intron | 6 | 1000GENOMES,GMI,HGSV,ILLUMINA-UK,PERLEGEN,SSMP, | 2 | 0.966810 |
TXNRD2 | chr22 | 19897967 | 19897968 | rs55793425 | + | G | G/T | single | intron | 6 | 1000GENOMES,GMI,HGSV,ILLUMINA,ILLUMINA-UK,SSMP, | 2 | 0.972936 |
TXNRD2 | chr22 | 19898184 | 19898185 | rs56154039 | + | A | A/G | single | intron | 5 | 1000GENOMES,GMI,HGSV,ILLUMINA-UK,SSMP, | 2 | 0.966972 |
TXNRD2 | chr22 | 19898214 | 19898215 | rs12167533 | + | A | A/G | single | intron | 3 | 1000GENOMES,SC_SNP,TISHKOFF, | 2 | 0.967860 |
TXNRD2 | chr22 | 19898372 | 19898373 | rs9617849 | + | G | A/G | single | intron | 3 | 1000GENOMES,SC_SNP,TISHKOFF, | 2 | 0.032110 |
TXNRD2 | chr22 | 19898456 | 19898457 | rs55887811 | + | A | A/G | single | intron | 4 | 1000GENOMES,GMI,HGSV,SSMP, | 2 | 0.967401 |
TXNRD2 | chr22 | 19898565 | 19898566 | rs55920879 | + | T | C/T | single | intron | 6 | 1000GENOMES,BL,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI, | 2 | 0.983501 |
TXNRD2 | chr22 | 19898570 | 19898571 | rs71313930 | + | T | C/T | single | intron | 6 | 1000GENOMES,BL,COMPLETE_GENOMICS,ENSEMBL,HUMANGENOME_JCVI,TISHKOFF, | 2 | 0.984918 |
TXNRD2 | chr22 | 19898575 | 19898576 | rs4819848 | + | G | C/G | single | intron | 10 | 1000GENOMES,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,SC_SNP,TISHKOFF,WI_SSAHASNP, | 2 | 0.969406 |
TXNRD2 | chr22 | 19898588 | 19898589 | rs2871044 | + | A | A/C | single | intron | 13 | 1000GENOMES,BGI,BL,BUSHMAN,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,SC_SNP,SSAHASNP,SSMP,TSC-CSHL,WI_SSAHASNP, | 2 | 0.013730 |
TXNRD2 | chr22 | 19898590 | 19898591 | rs2871045 | + | T | C/T | single | intron | 14 | 1000GENOMES,BGI,BL,BUSHMAN,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,KRIBB_YJKIM,SC_SNP,SSAHASNP,SSMP,TSC-CSHL,WI_SSAHASNP, | 2 | 0.978858 |
TXNRD2 | chr22 | 19898659 | 19898660 | rs149796774 | + | C | -/C | deletion | intron | 6 | 1000GENOMES,BILGI_BIOE,LUNTER,SSMP,TISHKOFF,WARNICH_LAB, | 2 | 0.089073 |
TXNRD2 | chr22 | 19898817 | 19898818 | rs55715863 | + | C | A/C | single | intron | 6 | 1000GENOMES,CLINSEQ_SNP,GMI,HGSV,ILLUMINA-UK,SSMP, | 2 | 0.033978 |
TXNRD2 | chr22 | 19898836 | 19898837 | rs885987 | + | A | A/G | single | intron | 22 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,NHLBI-ESP,PJP,SC_JCM,SC_SNP,SI_EXO,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.308985 |
TXNRD2 | chr22 | 19898885 | 19898886 | rs9606176 | + | C | C/T | single | intron | 12 | 1000GENOMES,BUSHMAN,CLINSEQ_SNP,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,SC_SNP,SSMP,TISHKOFF, | 2 | 0.852651 |
TXNRD2 | chr22 | 19898886 | 19898887 | rs45550336 | + | G | A/G | single | intron | 7 | 1000GENOMES,CLINSEQ_SNP,GMI,ILLUMINA-UK,NHLBI-ESP,SI_EXO,SSMP, | 2 | 0.031318 |
TXNRD2 | chr22 | 19898996 | 19898997 | rs77585626 | + | A | A/G | single | intron | 3 | 1000GENOMES,NHLBI-ESP,TISHKOFF, | 2 | 0.982143 |
TXNRD2 | chr22 | 19899060 | 19899061 | rs16982754 | + | G | C/G | single | intron | 6 | 1000GENOMES,GMI,HGSV,ILLUMINA-UK,PERLEGEN,SSMP, | 2 | 0.034022 |
TXNRD2 | chr22 | 19899215 | 19899216 | rs79099740 | + | C | C/G | single | intron | 1 | 1000GENOMES, | 2 | 0.985192 |
TXNRD2 | chr22 | 19899470 | 19899471 | rs116287859 | + | C | C/T | single | intron | 3 | 1000GENOMES,SSMP,TISHKOFF, | 2 | 0.956010 |
TXNRD2 | chr22 | 19899765 | 19899766 | rs73880004 | + | C | C/T | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.966972 |
TXNRD2 | chr22 | 19899783 | 19899784 | rs114318103 | + | G | C/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.019164 |
TXNRD2 | chr22 | 19899817 | 19899818 | rs1878 | + | G | A/G | single | intron | 11 | 1000GENOMES,BCM-HGSC-SUB,BGI,COMPLETE_GENOMICS,GMI,HGSV,PERLEGEN,SC_SNP,SSMP,TISHKOFF,WIAF, | 2 | 0.376987 |
TXNRD2 | chr22 | 19899838 | 19899839 | rs7410379 | + | G | A/G | single | intron | 15 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BGI,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.366992 |
TXNRD2 | chr22 | 19899885 | 19899886 | rs2904563 | + | A | A/G | single | intron | 9 | 1000GENOMES,BCM_SSAHASNP,BL,BUSHMAN,GMI,PJP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.736939 |
TXNRD2 | chr22 | 19899890 | 19899891 | rs75784186 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.033537 |
TXNRD2 | chr22 | 19899895 | 19899896 | rs115340055 | + | A | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.965157 |
TXNRD2 | chr22 | 19899933 | 19899934 | rs34350581 | + | C | C/T | single | intron | 8 | 1000GENOMES,ABI,BCMHGSC_JDW,ENSEMBL,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.922090 |
TXNRD2 | chr22 | 19899976 | 19899977 | rs35155059 | + | G | G/T | single | intron | 4 | 1000GENOMES,ABI,BCMHGSC_JDW,ENSEMBL, | 2 | 0.922477 |
TXNRD2 | chr22 | 19899979 | 19899980 | rs34713791 | + | C | C/T | single | intron | 5 | 1000GENOMES,ABI,BCMHGSC_JDW,ENSEMBL,TISHKOFF, | 2 | 0.916055 |
TXNRD2 | chr22 | 19900074 | 19900075 | rs1005873 | + | A | A/G | single | intron | 16 | 1000GENOMES,ABI,BCM_SSAHASNP,BL,BUSHMAN,GMI,HGBASE,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SC_SNP,SSMP,TISHKOFF,TSC-CSHL,YUSUKE, | 2 | 0.722322 |
TXNRD2 | chr22 | 19900654 | 19900655 | rs61675186 | + | G | A/G | single | intron | 4 | 1000GENOMES,HGSV,ILLUMINA-UK,SSMP, | 2 | 0.029358 |
TXNRD2 | chr22 | 19900730 | 19900731 | rs34403630 | + | C | C/T | single | intron | 5 | 1000GENOMES,ABI,HUMANGENOME_JCVI,ILLUMINA,PJP, | 2 | 0.980275 |
TXNRD2 | chr22 | 19900731 | 19900732 | rs77542965 | + | G | A/G | single | intron | 3 | 1000GENOMES,SSMP,TISHKOFF, | 2 | 0.019164 |
TXNRD2 | chr22 | 19900766 | 19900767 | rs60787976 | + | T | C/T | single | intron | 5 | 1000GENOMES,GMI,HGSV,ILLUMINA-UK,SSMP, | 2 | 0.033028 |
TXNRD2 | chr22 | 19900949 | 19900950 | rs200524386 | + | C | -/C | deletion | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.032140 |
TXNRD2 | chr22 | 19900956 | 19900957 | rs201166272 | + | A | -/A | deletion | intron | 1 | 1000GENOMES, | 2 | 0.031680 |
TXNRD2 | chr22 | 19900981 | 19900982 | rs73880005 | + | T | C/T | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.033028 |
TXNRD2 | chr22 | 19901008 | 19901009 | rs73880006 | + | C | C/T | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.966972 |
TXNRD2 | chr22 | 19901097 | 19901098 | rs73880007 | + | A | A/G | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.966972 |
TXNRD2 | chr22 | 19901205 | 19901206 | rs73880008 | + | G | A/G | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.033028 |
TXNRD2 | chr22 | 19901208 | 19901209 | rs73880009 | + | T | C/T | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.034862 |
TXNRD2 | chr22 | 19901422 | 19901423 | rs35515070 | + | C | C/T | single | intron | 8 | 1000GENOMES,ABI,BCMHGSC_JDW,ENSEMBL,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.921245 |
TXNRD2 | chr22 | 19901467 | 19901468 | rs73880010 | + | T | A/T | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.033028 |
TXNRD2 | chr22 | 19902165 | 19902166 | rs12167777 | + | G | A/G | single | intron | 3 | 1000GENOMES,SC_SNP,TISHKOFF, | 2 | 0.038328 |
TXNRD2 | chr22 | 19902172 | 19902173 | rs10427792 | + | C | C/T | single | intron | 3 | 1000GENOMES,BCM_SSAHASNP,TISHKOFF, | 2 | 0.975610 |
TXNRD2 | chr22 | 19902323 | 19902324 | rs73880011 | + | G | A/G | single | intron | 5 | 1000GENOMES,GMI,ILLUMINA,ILLUMINA-UK,SSMP, | 2 | 0.036239 |
TXNRD2 | chr22 | 19902525 | 19902526 | rs4597638 | + | T | C/T | single | intron | 10 | 1000GENOMES,ABI,BL,BUSHMAN,DEVINE_LAB,ILLUMINA,PERLEGEN,SC_JCM,SSMP,TISHKOFF, | 2 | 0.155957 |
TXNRD2 | chr22 | 19902670 | 19902671 | rs16982755 | + | C | C/T | single | intron | 8 | 1000GENOMES,GMI,ILLUMINA,ILLUMINA-UK,NHLBI-ESP,PERLEGEN,SI_EXO,SSMP, | 2 | 0.951790 |
TXNRD2 | chr22 | 19902895 | 19902896 | rs2073771 | - | C | A/G | single | intron | 16 | 1000GENOMES,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGBASE,ILLUMINA,KRIBB_YJKIM,PJP,SC_SNP,SI_EXO,SSMP,YUSUKE, | 2 | 0.540220 |
TXNRD2 | chr22 | 19902896 | 19902897 | rs116165976 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.017857 |
TXNRD2 | chr22 | 19902916 | 19902917 | rs114905700 | + | G | C/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.021777 |
TXNRD2 | chr22 | 19903289 | 19903290 | rs61736929 | + | C | C/G | single | missense | 9 | 1000GENOMES,CLINSEQ_SNP,CORNELL,EXOME_CHIP,GOLDSTEINLAB,ILLUMINA,NHLBI-ESP,SEATTLESEQ,TISHKOFF, | 2 | 0.963597 |
TXNRD2 | chr22 | 19903440 | 19903441 | rs79661740 | + | C | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.988676 |
TXNRD2 | chr22 | 19903657 | 19903658 | rs115268335 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.029181 |
TXNRD2 | chr22 | 19903706 | 19903707 | rs35792038 | + | T | C/T | single | intron | 9 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,ILLUMINA,PJP,SSMP,TISHKOFF, | 2 | 0.108417 |
TXNRD2 | chr22 | 19903732 | 19903733 | rs4819850 | + | A | A/G | single | intron | 18 | 1000GENOMES,ABI,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SC_SNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.267198 |
TXNRD2 | chr22 | 19903840 | 19903841 | rs78090538 | + | C | C/T | single | intron | 3 | 1000GENOMES,ILLUMINA,TISHKOFF, | 2 | 0.959930 |
TXNRD2 | chr22 | 19904316 | 19904317 | rs7289375 | + | T | G/T | single | intron | 3 | 1000GENOMES,BCM_SSAHASNP,TISHKOFF, | 2 | 0.024730 |
TXNRD2 | chr22 | 19904897 | 19904898 | rs117014524 | + | G | A/G | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.012620 |
TXNRD2 | chr22 | 19905116 | 19905117 | rs145701783 | + | C | C/T | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.987144 |
TXNRD2 | chr22 | 19905554 | 19905555 | rs77573782 | + | C | C/T | single | intron | 3 | 1000GENOMES,BL,SSMP, | 2 | 0.976501 |
TXNRD2 | chr22 | 19905801 | 19905802 | rs756661 | - | G | C/T | single | intron | 26 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,PJP,SC_SNP,SI_EXO,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.254886 |
TXNRD2 | chr22 | 19905867 | 19905868 | rs34776119 | + | G | G/T | single | intron | 10 | 1000GENOMES,ABI,BCM-HGSC-SUB,COMPLETE_GENOMICS,GMI,HUMANGENOME_JCVI,ILLUMINA,PJP,SI_EXO,TISHKOFF, | 2 | 0.956462 |
TXNRD2 | chr22 | 19905943 | 19905944 | rs10427871 | + | A | A/G | single | intron | 6 | 1000GENOMES,AFFY,BCM_SSAHASNP,ILLUMINA,KRIBB_YJKIM,TISHKOFF, | 2 | 0.970807 |
TXNRD2 | chr22 | 19906051 | 19906052 | rs9618715 | + | G | A/G | single | intron | 3 | 1000GENOMES,SC_SNP,TISHKOFF, | 2 | 0.040070 |
TXNRD2 | chr22 | 19906095 | 19906096 | rs5993865 | + | C | C/T | single | intron | 17 | 1000GENOMES,ABI,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,ILLUMINA,PJP,SC_SNP,SI_EXO,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.489469 |
TXNRD2 | chr22 | 19906255 | 19906256 | rs34751052 | + | G | A/G | single | intron | 12 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,HGSV,HUMANGENOME_JCVI,PJP,SI_EXO,SSMP,TISHKOFF, | 2 | 0.105672 |
TXNRD2 | chr22 | 19906304 | 19906305 | rs182088477 | + | T | A/T | single | intron | 1 | 1000GENOMES, | 2 | 0.031221 |
TXNRD2 | chr22 | 19906305 | 19906306 | rs3747067 | + | C | C/G | single | intron | 24 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PJP,SC_SNP,SI_EXO,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,YUSUKE, | 2 | 0.328930 |
TXNRD2 | chr22 | 19906369 | 19906370 | rs9606178 | + | G | A/G | single | intron | 6 | 1000GENOMES,CLINSEQ_SNP,ILLUMINA,NHLBI-ESP,SC_SNP,SSMP, | 2 | 0.020808 |
TXNRD2 | chr22 | 19906510 | 19906511 | rs11541479 | - | G | C/T | single | coding-synon | 17 | 1000GENOMES,ABI,BCMHGSC_JDW,CGAP-GAI,CLINSEQ_SNP,CORNELL,ENSEMBL,EXOME_CHIP,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PJP,SC_SNP,SEATTLESEQ,SSMP, | 2 | 0.828670 |
TXNRD2 | chr22 | 19906693 | 19906695 | rs146802029 | + | AC | -/AC | deletion | intron | 4 | 1000GENOMES,LUNTER,SSMP,WARNICH_LAB, | 2 | 0.171717 |
TXNRD2 | chr22 | 19906795 | 19906796 | rs13057265 | + | A | A/G | single | intron | 6 | 1000GENOMES,BCMHGSC_JDW,BUSHMAN,ENSEMBL,SSAHASNP,SSMP, | 2 | 0.884051 |
TXNRD2 | chr22 | 19907098 | 19907099 | rs5748469 | + | C | A/C | single | missense | 20 | 1000GENOMES,BCM-HGSC-SUB,BGI,BL,BUSHMAN,CGAP-GAI,CLINSEQ_SNP,COMPLETE_GENOMICS,CORNELL,EXOME_CHIP,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,SC_SNP,SEATTLESEQ,SSMP,TISHKOFF, | 2 | 0.463202 |
TXNRD2 | chr22 | 19907117 | 19907118 | rs5748470 | + | G | A/G | single | coding-synon | 21 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CORNELL,ENSEMBL,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,PJP,SC_SNP,SEATTLESEQ,SSMP,TISHKOFF, | 2 | 0.581461 |
TXNRD2 | chr22 | 19907191 | 19907192 | rs5748471 | + | A | A/G | single | intron | 18 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,NHLBI-ESP,PERLEGEN,PJP,SC_SNP,SSMP,TISHKOFF, | 3 | 0.260707 |
TXNRD2 | chr22 | 19907302 | 19907303 | rs7286612 | + | T | C/T | single | intron | 6 | BCM_SSAHASNP,COMPLETE_GENOMICS,ENSEMBL,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.108247 |
TXNRD2 | chr22 | 19907345 | 19907346 | rs17745433 | + | T | C/T | single | intron | 8 | 1000GENOMES,BCMHGSC_JDW,COMPLETE_GENOMICS,ENSEMBL,HUMANGENOME_JCVI,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.112200 |
TXNRD2 | chr22 | 19907471 | 19907472 | rs71312725 | + | T | C/T | single | intron | 6 | 1000GENOMES,COMPLETE_GENOMICS,ENSEMBL,HUMANGENOME_JCVI,SSMP,TISHKOFF, | 2 | 0.102106 |
TXNRD2 | chr22 | 19907482 | 19907483 | rs62222136 | + | A | A/G | single | intron | 7 | 1000GENOMES,BCMHGSC_JDW,BUSHMAN,ENSEMBL,HUMANGENOME_JCVI,SSMP,TISHKOFF, | 2 | 0.893364 |
TXNRD2 | chr22 | 19907523 | 19907524 | rs114526033 | + | C | A/C | single | intron | 1 | 1000GENOMES, | 2 | 0.010453 |
TXNRD2 | chr22 | 19907545 | 19907546 | rs115193076 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.014808 |
TXNRD2 | chr22 | 19907670 | 19907671 | rs145329713 | + | C | A/C | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.014692 |
TXNRD2 | chr22 | 19907692 | 19907693 | rs35723448 | + | A | A/G | single | intron | 10 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,HUMANGENOME_JCVI,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.893822 |
TXNRD2 | chr22 | 19907756 | 19907757 | rs115659066 | + | A | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.986498 |
TXNRD2 | chr22 | 19907793 | 19907794 | rs17745445 | + | G | A/G | single | intron | 8 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,HUMANGENOME_JCVI,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.099089 |
TXNRD2 | chr22 | 19907827 | 19907828 | rs35393877 | + | T | C/T | single | intron | 5 | 1000GENOMES,ABI,HUMANGENOME_JCVI,SSMP,TISHKOFF, | 2 | 0.082110 |
TXNRD2 | chr22 | 19907919 | 19907920 | rs11089318 | + | G | G/T | single | intron | 5 | 1000GENOMES,COMPLETE_GENOMICS,GMI,SC_SNP,SSMP, | 2 | 0.883486 |
TXNRD2 | chr22 | 19907926 | 19907927 | rs11089319 | + | G | A/G | single | intron | 13 | 1000GENOMES,ABI,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.119854 |
TXNRD2 | chr22 | 19907976 | 19907977 | rs76011333 | + | A | A/G | single | intron | 4 | 1000GENOMES,BL,GMI,SSMP, | 2 | 0.883375 |
TXNRD2 | chr22 | 19907998 | 19907999 | rs118052695 | + | G | A/G | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.040905 |
TXNRD2 | chr22 | 19908022 | 19908023 | rs1978055 | + | T | C/T | single | intron | 17 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TSC-CSHL, | 2 | 0.347925 |
TXNRD2 | chr22 | 19908063 | 19908064 | rs13056751 | + | C | C/T | single | intron | 7 | 1000GENOMES,ABI,BCMHGSC_JDW,ENSEMBL,HUMANGENOME_JCVI,SSAHASNP,SSMP, | 2 | 0.928964 |
TXNRD2 | chr22 | 19908142 | 19908143 | rs1978057 | + | T | C/T | single | intron | 17 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,SSAHASNP,TISHKOFF,TSC-CSHL, | 2 | 0.346119 |
TXNRD2 | chr22 | 19908218 | 19908219 | rs1978058 | + | C | C/T | single | intron | 21 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.728226 |
TXNRD2 | chr22 | 19908353 | 19908354 | rs112258831 | + | A | A/G | single | intron | 5 | 1000GENOMES,BUSHMAN,GMI,ILLUMINA,SSMP, | 2 | 0.890367 |
TXNRD2 | chr22 | 19908355 | 19908356 | rs11089320 | + | C | C/T | single | intron | 6 | 1000GENOMES,BUSHMAN,GMI,SC_SNP,SSMP,TISHKOFF, | 2 | 0.825229 |
TXNRD2 | chr22 | 19908362 | 19908363 | rs149066518 | + | T | C/T | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.013774 |
TXNRD2 | chr22 | 19908425 | 19908426 | rs138564052 | + | A | A/C | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.970156 |
TXNRD2 | chr22 | 19908455 | 19908456 | rs145240933 | + | T | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.013774 |
TXNRD2 | chr22 | 19908461 | 19908462 | rs200118529 | + | A | -/A | deletion | intron | 3 | 1000GENOMES,LUNTER,SSMP, | 2 | 0.019743 |
TXNRD2 | chr22 | 19908542 | 19908543 | rs12484807 | + | C | C/T | single | intron | 9 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,CSHL-HAPMAP,ENSEMBL,PJP,SSMP,TISHKOFF, | 2 | 0.808257 |
TXNRD2 | chr22 | 19908578 | 19908579 | rs12484727 | + | G | A/G | single | intron | 6 | 1000GENOMES,ABI,BL,CSHL-HAPMAP,GMI,SSMP, | 2 | 0.108815 |
TXNRD2 | chr22 | 19908843 | 19908844 | rs111857251 | + | G | G/T | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.986239 |
TXNRD2 | chr22 | 19908864 | 19908865 | rs114985812 | + | C | C/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.974303 |
TXNRD2 | chr22 | 19908874 | 19908875 | rs5746844 | + | A | A/T | single | intron | 17 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.183934 |
TXNRD2 | chr22 | 19908888 | 19908889 | rs149289292 | + | G | C/G | single | intron | 1 | 1000GENOMES, | 2 | 0.016988 |
TXNRD2 | chr22 | 19909256 | 19909257 | rs74965969 | + | G | C/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.027003 |
TXNRD2 | chr22 | 19909279 | 19909280 | rs75996974 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.027003 |
TXNRD2 | chr22 | 19909284 | 19909285 | rs8141516 | + | G | C/G | single | intron | 14 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PERLEGEN,PJP,SC_SNP,SSAHASNP,SSMP,WI_SSAHASNP, | 2 | 0.354167 |
TXNRD2 | chr22 | 19909383 | 19909384 | rs74956910 | + | T | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.027003 |
TXNRD2 | chr22 | 19909425 | 19909426 | rs8141691 | + | G | A/G | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.389476 |
TXNRD2 | chr22 | 19909511 | 19909512 | rs75840266 | + | C | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.972125 |
TXNRD2 | chr22 | 19909682 | 19909683 | rs73383885 | + | A | A/C | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.984321 |
TXNRD2 | chr22 | 19909976 | 19909977 | rs1012157 | - | A | C/T | single | intron | 23 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SC_JCM,SC_SNP,SNP500CANCER,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.804955 |
TXNRD2 | chr22 | 19910071 | 19910072 | rs73383887 | + | C | C/T | single | intron | 4 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.987626 |
TXNRD2 | chr22 | 19910160 | 19910161 | rs111394916 | + | T | C/T | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.017431 |
TXNRD2 | chr22 | 19910176 | 19910177 | rs16982759 | + | T | C/T | single | intron | 5 | 1000GENOMES,AFFY,KRIBB_YJKIM,PERLEGEN,TISHKOFF, | 2 | 0.037118 |
TXNRD2 | chr22 | 19910715 | 19910716 | rs7289747 | + | A | A/C | single | intron | 8 | 1000GENOMES,AFFY,BCM_SSAHASNP,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP, | 2 | 0.970444 |
TXNRD2 | chr22 | 19910761 | 19910762 | rs34004093 | + | A | A/G | single | intron | 6 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,SSMP,TISHKOFF, | 2 | 0.859762 |
TXNRD2 | chr22 | 19910762 | 19910762 | rs147306338 | + | - | -/T | insertion | intron | 3 | 1000GENOMES,LUNTER,TISHKOFF, | 2 | 0.987603 |
TXNRD2 | chr22 | 19911154 | 19911155 | rs112506735 | + | G | A/G | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.044037 |
TXNRD2 | chr22 | 19911585 | 19911586 | rs10212039 | + | C | C/T | single | intron | 19 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.245446 |
TXNRD2 | chr22 | 19911618 | 19911619 | rs10212033 | + | G | A/G | single | intron | 17 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.753531 |
TXNRD2 | chr22 | 19911830 | 19911831 | rs12484658 | + | A | A/G | single | intron | 7 | 1000GENOMES,BL,BUSHMAN,CSHL-HAPMAP,GMI,ILLUMINA,SSMP, | 2 | 0.882515 |
TXNRD2 | chr22 | 19912014 | 19912015 | rs9306229 | + | T | C/T | single | intron | 20 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.816233 |
TXNRD2 | chr22 | 19912357 | 19912358 | rs73880015 | + | G | A/G | single | intron | 4 | 1000GENOMES,ILLUMINA,ILLUMINA-UK,SSMP, | 2 | 0.033028 |
TXNRD2 | chr22 | 19912533 | 19912534 | rs185370338 | + | A | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.984389 |
TXNRD2 | chr22 | 19912534 | 19912535 | rs9606180 | + | T | C/T | single | intron | 5 | 1000GENOMES,HGSV,SC_SNP,SSMP,TISHKOFF, | 2 | 0.073462 |
TXNRD2 | chr22 | 19912573 | 19912574 | rs13055728 | + | A | A/G | single | intron | 2 | 1000GENOMES,SSAHASNP, | 2 | 0.989440 |
TXNRD2 | chr22 | 19912582 | 19912583 | rs12484923 | + | G | A/G | single | intron | 3 | 1000GENOMES,CSHL-HAPMAP,SSMP, | 2 | 0.069330 |
TXNRD2 | chr22 | 19912623 | 19912624 | rs5748474 | + | G | A/G | single | intron | 13 | 1000GENOMES,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.466423 |
TXNRD2 | chr22 | 19912626 | 19912627 | rs144844607 | + | G | A/G | single | intron | 2 | 1000GENOMES,GMI, | 2 | 0.016529 |
TXNRD2 | chr22 | 19912629 | 19912630 | rs148585035 | + | G | A/G | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.020661 |
TXNRD2 | chr22 | 19912661 | 19912662 | rs142944462 | + | A | A/C | single | intron | 3 | 1000GENOMES,SSMP,TISHKOFF, | 2 | 0.972911 |
TXNRD2 | chr22 | 19912667 | 19912668 | rs111619820 | + | A | A/G | single | intron | 4 | 1000GENOMES,BUSHMAN,SSMP,TISHKOFF, | 2 | 0.967416 |
TXNRD2 | chr22 | 19912670 | 19912671 | rs139231006 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.014692 |
TXNRD2 | chr22 | 19912675 | 19912676 | rs79684681 | + | A | A/G | single | intron | 4 | 1000GENOMES,ENSEMBL,PJP,SSMP, | 2 | 0.904587 |
TXNRD2 | chr22 | 19912676 | 19912677 | rs9606181 | + | T | G/T | single | intron | 6 | 1000GENOMES,ENSEMBL,PJP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.158570 |
TXNRD2 | chr22 | 19912686 | 19912687 | rs190801791 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.022039 |
TXNRD2 | chr22 | 19912774 | 19912775 | rs150076234 | + | C | C/T | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.988522 |
TXNRD2 | chr22 | 19912785 | 19912786 | rs113948634 | + | G | A/G | single | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,SSMP,TISHKOFF, | 2 | 0.030275 |
TXNRD2 | chr22 | 19913092 | 19913093 | rs5993871 | + | A | A/G | single | intron | 10 | 1000GENOMES,BCMHGSC_JDW,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,SC_SNP,SSMP,TISHKOFF, | 2 | 0.778643 |
TXNRD2 | chr22 | 19913097 | 19913098 | rs5993872 | + | A | A/C | single | intron | 12 | 1000GENOMES,BCMHGSC_JDW,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,SC_SNP,SSMP,TISHKOFF, | 2 | 0.765678 |
TXNRD2 | chr22 | 19913194 | 19913195 | rs200683723 | + | C | -/C | deletion | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.012397 |
TXNRD2 | chr22 | 19913460 | 19913461 | rs141416386 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.016070 |
TXNRD2 | chr22 | 19913487 | 19913488 | rs5993873 | + | A | A/G | single | intron | 12 | 1000GENOMES,BCM_SSAHASNP,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.395338 |
TXNRD2 | chr22 | 19913725 | 19913726 | rs5993874 | + | G | A/G | single | intron | 12 | 1000GENOMES,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PJP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.682047 |
TXNRD2 | chr22 | 19913740 | 19913741 | rs7285277 | + | G | A/G | single | intron | 9 | 1000GENOMES,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,PJP,SSMP,TISHKOFF, | 2 | 0.215265 |
TXNRD2 | chr22 | 19913904 | 19913905 | rs5748475 | + | T | C/T | single | intron | 10 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI,HUMANGENOME_JCVI,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.602652 |
TXNRD2 | chr22 | 19914029 | 19914030 | rs5748476 | + | C | C/T | single | intron | 4 | 1000GENOMES,GMI,SC_SNP,SSMP, | 2 | 0.973532 |
TXNRD2 | chr22 | 19914235 | 19914236 | rs5748477 | + | C | C/G | single | intron | 13 | 1000GENOMES,ABI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_SNP,SSAHASNP, | 2 | 0.397166 |
TXNRD2 | chr22 | 19914310 | 19914311 | rs9606182 | + | A | A/C | single | intron | 11 | 1000GENOMES,BCMHGSC_JDW,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PJP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.622823 |
TXNRD2 | chr22 | 19914354 | 19914355 | rs116586974 | + | C | A/C/T | single | intron | 3 | 1000GENOMES,SSMP,TISHKOFF, | 2 | 0.988676 |
TXNRD2 | chr22 | 19914853 | 19914854 | rs17210001 | + | T | C/T | single | intron | 8 | 1000GENOMES,AFFY,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.139252 |
TXNRD2 | chr22 | 19915189 | 19915190 | rs34983191 | - | A | C/T | single | intron | 1 | SNP500CANCER, | 2 | 0.042000 |
TXNRD2 | chr22 | 19915325 | 19915326 | rs5993875 | + | A | A/G | single | intron | 21 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SC_SNP,SNP500CANCER,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.317068 |
TXNRD2 | chr22 | 19915432 | 19915433 | rs16982760 | + | A | A/G | single | intron | 7 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,HGSV,PERLEGEN,SNP500CANCER,TISHKOFF, | 2 | 0.963445 |
TXNRD2 | chr22 | 19915679 | 19915680 | rs7287604 | + | C | C/T | single | intron | 14 | 1000GENOMES,ABI,AFFY,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,HGSV,ILLUMINA-UK,KRIBB_YJKIM,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.778979 |
TXNRD2 | chr22 | 19915917 | 19915918 | rs77959191 | + | C | A/C | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.016040 |
TXNRD2 | chr22 | 19915938 | 19915939 | rs7290448 | + | G | A/G | single | intron | 15 | 1000GENOMES,ABI,AFFY,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KRIBB_YJKIM,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.225272 |
TXNRD2 | chr22 | 19916303 | 19916304 | rs113291654 | + | C | C/T | single | intron | 4 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.962878 |
TXNRD2 | chr22 | 19916706 | 19916707 | rs35678306 | + | G | A/G | single | intron | 7 | 1000GENOMES,ABI,COMPLETE_GENOMICS,ENSEMBL,HUMANGENOME_JCVI,SSMP,TISHKOFF, | 2 | 0.214090 |
TXNRD2 | chr22 | 19916817 | 19916818 | rs5993876 | + | C | C/G | single | intron | 8 | 1000GENOMES,BCMHGSC_JDW,BL,COMPLETE_GENOMICS,GMI,SC_SNP,SSMP,TISHKOFF, | 2 | 0.625573 |
TXNRD2 | chr22 | 19917012 | 19917013 | rs5748478 | + | C | C/T | single | intron | 17 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KRIBB_YJKIM,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.320388 |
TXNRD2 | chr22 | 19917266 | 19917267 | rs74759023 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.010889 |
TXNRD2 | chr22 | 19917340 | 19917340 | rs3842462 | + | - | -/C | insertion | intron | 11 | 1000GENOMES,ABI,BILGI_BIOE,BL,BUSHMAN,GMI,HGSV,HUMANGENOME_JCVI,LUNTER,TISHKOFF,YUSUKE, | 2 | 0.399267 |
TXNRD2 | chr22 | 19917855 | 19917856 | rs4333017 | + | C | C/T | single | intron | 8 | 1000GENOMES,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,PERLEGEN,SC_JCM,SSMP, | 2 | 0.926527 |
TXNRD2 | chr22 | 19918157 | 19918158 | rs112707785 | + | C | C/T | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.987609 |
TXNRD2 | chr22 | 19918230 | 19918231 | rs9617850 | + | G | A/G | single | intron | 15 | 1000GENOMES,ABI,AFFY,BUSHMAN,COMPLETE_GENOMICS,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.241079 |
TXNRD2 | chr22 | 19918370 | 19918371 | rs114490696 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.011324 |
TXNRD2 | chr22 | 19918722 | 19918723 | rs79960807 | + | G | A/G | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.014795 |
TXNRD2 | chr22 | 19919232 | 19919233 | rs2871046 | + | C | C/G | single | intron | 7 | 1000GENOMES,ABI,GMI,SC_JCM,SNP500CANCER,SSMP,TSC-CSHL, | 2 | 0.867749 |
TXNRD2 | chr22 | 19919288 | 19919289 | rs12158192 | + | G | A/G | single | intron | 4 | 1000GENOMES,SC_SNP,SNP500CANCER,TISHKOFF, | 2 | 0.018948 |
TXNRD2 | chr22 | 19919390 | 19919391 | rs72556513 | - | A | C/T | single | intron | 4 | 1000GENOMES,BUSHMAN,SNP500CANCER,TISHKOFF, | 2 | 0.011592 |
TXNRD2 | chr22 | 19919404 | 19919405 | rs4485648 | + | T | C/T | single | intron | 15 | 1000GENOMES,ABI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,HGSV,HUMANGENOME_JCVI,PJP,SC_JCM,SNP500CANCER,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.227007 |
TXNRD2 | chr22 | 19919465 | 19919466 | rs72554693 | - | A | C/T | single | intron | 3 | 1000GENOMES,SNP500CANCER,TISHKOFF, | 2 | 0.012781 |
TXNRD2 | chr22 | 19919467 | 19919468 | rs72550765 | - | G | C/T | single | intron | 5 | 1000GENOMES,COMPLETE_GENOMICS,GMI,SNP500CANCER,SSMP, | 2 | 0.922601 |
TXNRD2 | chr22 | 19919600 | 19919601 | rs9605029 | + | G | A/G | single | intron | 7 | 1000GENOMES,BL,COMPLETE_GENOMICS,GMI,SC_SNP,SSMP,TISHKOFF, | 2 | 0.357798 |
TXNRD2 | chr22 | 19919608 | 19919609 | rs4497958 | + | G | A/G | single | intron | 11 | 1000GENOMES,ABI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,HGSV,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.231016 |
TXNRD2 | chr22 | 19919639 | 19919640 | rs5993877 | + | C | C/T | single | intron | 3 | 1000GENOMES,SC_SNP,TISHKOFF, | 2 | 0.974747 |
TXNRD2 | chr22 | 19919661 | 19919662 | rs4626020 | + | A | A/C | single | intron | 12 | 1000GENOMES,ABI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,HGSV,HUMANGENOME_JCVI,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.780622 |
TXNRD2 | chr22 | 19920228 | 19920229 | rs73385608 | + | G | A/G | single | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA-UK,SSMP, | 2 | 0.042163 |
TXNRD2 | chr22 | 19920288 | 19920289 | rs79103769 | + | G | G/T | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.987156 |
TXNRD2 | chr22 | 19920331 | 19920332 | rs113919066 | + | C | -/C | deletion | intron | 4 | 1000GENOMES,BUSHMAN,LUNTER,TISHKOFF, | 2 | 0.015138 |
TXNRD2 | chr22 | 19920358 | 19920359 | rs9606186 | + | C | C/G | single | intron | 18 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PERLEGEN,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.362763 |
TXNRD2 | chr22 | 19920436 | 19920437 | rs113571049 | + | T | A/T | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.012844 |
TXNRD2 | chr22 | 19920645 | 19920646 | rs5746846 | + | C | C/G | single | intron | 14 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.417532 |
TXNRD2 | chr22 | 19920656 | 19920657 | rs73880017 | + | C | A/C | single | intron | 4 | 1000GENOMES,ILLUMINA,ILLUMINA-UK,SSMP, | 2 | 0.017890 |
TXNRD2 | chr22 | 19920939 | 19920940 | rs74397767 | + | G | A/G | single | intron | 4 | 1000GENOMES,BUSHMAN,RWHITE,TISHKOFF, | 2 | 0.012385 |
TXNRD2 | chr22 | 19920948 | 19920949 | rs10483103 | + | G | A/G | single | intron | 10 | 1000GENOMES,ABI,AFFY,CSHL-HAPMAP,GMI,ILLUMINA,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.241635 |
TXNRD2 | chr22 | 19921002 | 19921003 | rs5746847 | + | T | C/T | single | intron | 20 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.701913 |
TXNRD2 | chr22 | 19921102 | 19921103 | rs9618716 | + | T | C/T | single | intron | 7 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,ILLUMINA,KRIBB_YJKIM,SC_SNP,TISHKOFF, | 2 | 0.052395 |
TXNRD2 | chr22 | 19921113 | 19921114 | rs79987203 | + | C | C/T | single | intron | 3 | 1000GENOMES,RWHITE,TISHKOFF, | 2 | 0.988062 |
TXNRD2 | chr22 | 19921136 | 19921137 | rs9605030 | + | C | C/T | single | intron | 8 | 1000GENOMES,BL,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SC_SNP,SSMP, | 2 | 0.857559 |
TXNRD2 | chr22 | 19921194 | 19921195 | rs73880018 | + | A | A/G | single | intron | 4 | 1000GENOMES,ILLUMINA-UK,RWHITE,SSMP, | 2 | 0.982110 |
TXNRD2 | chr22 | 19921377 | 19921378 | rs9605031 | + | C | C/T | single | intron | 12 | 1000GENOMES,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,KRIBB_YJKIM,SC_SNP,SSMP,TISHKOFF, | 2 | 0.776869 |
TXNRD2 | chr22 | 19921516 | 19921518 | rs151191491 | + | AG | -/AG | deletion | intron | 2 | 1000GENOMES,LUNTER, | 2 | 0.014692 |
TXNRD2 | chr22 | 19921640 | 19921641 | rs8140265 | + | G | A/G | single | intron | 13 | 1000GENOMES,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.223023 |
TXNRD2 | chr22 | 19921824 | 19921825 | rs5748480 | + | A | A/G | single | intron | 17 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.538848 |
TXNRD2 | chr22 | 19921977 | 19921978 | rs9618717 | + | A | A/G | single | intron | 12 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.541209 |
TXNRD2 | chr22 | 19922342 | 19922343 | rs5748481 | + | T | A/T | single | intron | 10 | 1000GENOMES,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,PJP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.228126 |
TXNRD2 | chr22 | 19922373 | 19922374 | rs5748482 | + | C | C/T | single | intron | 11 | 1000GENOMES,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,PJP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.766835 |
TXNRD2 | chr22 | 19922445 | 19922446 | rs5748483 | + | A | A/G | single | intron | 16 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.333979 |
TXNRD2 | chr22 | 19922486 | 19922487 | rs139036179 | + | T | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.012397 |
TXNRD2 | chr22 | 19922542 | 19922543 | rs12483995 | + | C | C/T | single | intron | 6 | 1000GENOMES,ABI,CSHL-HAPMAP,GMI,SSMP,TISHKOFF, | 2 | 0.868687 |
TXNRD2 | chr22 | 19922584 | 19922585 | rs5748484 | + | C | C/T | single | intron | 7 | 1000GENOMES,BCMHGSC_JDW,BL,GMI,PJP,SC_SNP,SSMP, | 2 | 0.774827 |
TXNRD2 | chr22 | 19922595 | 19922596 | rs144802689 | + | A | A/G | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.988981 |
TXNRD2 | chr22 | 19922604 | 19922605 | rs5993878 | + | G | A/G | single | intron | 3 | 1000GENOMES,SC_SNP,TISHKOFF, | 2 | 0.017890 |
TXNRD2 | chr22 | 19923152 | 19923153 | rs6518589 | + | T | C/T | single | intron | 17 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.579863 |
TXNRD2 | chr22 | 19923405 | 19923406 | rs5746848 | + | T | C/T | single | intron | 19 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PERLEGEN,SC_SNP,SNP500CANCER,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 3 | 0.563941 |
TXNRD2 | chr22 | 19923414 | 19923415 | rs5748485 | + | A | A/G | single | intron | 19 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,SC_SNP,SNP500CANCER,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.319423 |
TXNRD2 | chr22 | 19923429 | 19923430 | rs55733201 | + | G | C/G | single | intron | 3 | 1000GENOMES,HGSV,SNP500CANCER, | 2 | 0.019335 |
TXNRD2 | chr22 | 19923440 | 19923441 | rs5748486 | + | C | C/G | single | intron | 16 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_SNP,SNP500CANCER,SSMP,TISHKOFF, | 2 | 0.337442 |
TXNRD2 | chr22 | 19923524 | 19923525 | rs139511379 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.012397 |
TXNRD2 | chr22 | 19923731 | 19923732 | rs76961663 | + | G | A/G | single | intron | 4 | 1000GENOMES,GMI,SSMP,TISHKOFF, | 2 | 0.138544 |
TXNRD2 | chr22 | 19924020 | 19924021 | rs6518591 | + | A | A/G | single | intron | 17 | 1000GENOMES,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SC_SNP,SNP500CANCER,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.773821 |
TXNRD2 | chr22 | 19924483 | 19924484 | rs9618719 | + | C | C/T | single | intron | 6 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,ILLUMINA,SC_SNP,TISHKOFF, | 2 | 0.963349 |
TXNRD2 | chr22 | 19924537 | 19924538 | rs5748487 | + | T | G/T | single | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.577889 |
TXNRD2 | chr22 | 19924578 | 19924579 | rs11705619 | + | T | C/T | single | intron | 11 | 1000GENOMES,ABI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,ILLUMINA,KRIBB_YJKIM,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.119471 |
TXNRD2 | chr22 | 19924611 | 19924612 | rs9606189 | + | G | C/G | single | intron | 10 | 1000GENOMES,AFFY,BCMHGSC_JDW,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PJP,SC_SNP, | 2 | 0.222905 |
TXNRD2 | chr22 | 19924664 | 19924665 | rs73385635 | + | C | C/T | single | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA-UK,SSMP, | 2 | 0.960587 |
TXNRD2 | chr22 | 19924888 | 19924889 | rs112964171 | + | G | G/T | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.987156 |
TXNRD2 | chr22 | 19924896 | 19924897 | rs73385636 | + | G | G/T | single | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA-UK,SSMP, | 2 | 0.968378 |
TXNRD2 | chr22 | 19925165 | 19925166 | rs73880021 | + | G | A/G | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.038073 |
TXNRD2 | chr22 | 19925271 | 19925272 | rs117018827 | + | C | C/T | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.981723 |
TXNRD2 | chr22 | 19925301 | 19925302 | rs80137494 | + | C | C/T | single | intron | 3 | 1000GENOMES,SSMP,TISHKOFF, | 2 | 0.987369 |
TXNRD2 | chr22 | 19925413 | 19925414 | rs2078748 | + | A | A/G | single | intron | 11 | 1000GENOMES,ABI,BCMHGSC_JDW,COMPLETE_GENOMICS,ENSEMBL,GMI,PJP,SC_JCM,SC_SNP,SSMP,TSC-CSHL, | 2 | 0.780018 |
TXNRD2 | chr22 | 19925570 | 19925571 | rs73385638 | + | A | A/C | single | intron | 5 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA,ILLUMINA-UK,SSMP, | 2 | 0.961045 |
TXNRD2 | chr22 | 19925966 | 19925980 | rs148950828 | + | ACCATACACATTCA | -/ACCATACACATTC | deletion | intron | 2 | 1000GENOMES,LUNTER, | 2 | 0.124885 |
TXNRD2 | chr22 | 19925998 | 19925999 | rs55704968 | + | C | C/T | single | intron | 5 | 1000GENOMES,COMPLETE_GENOMICS,HGSV,ILLUMINA-UK,SSMP, | 2 | 0.960587 |
TXNRD2 | chr22 | 19926003 | 19926004 | rs9606190 | + | T | C/T | single | intron | 11 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,PJP,SC_SNP,SSMP, | 2 | 0.219982 |
TXNRD2 | chr22 | 19926330 | 19926331 | rs2871047 | + | G | A/G | single | intron | 7 | 1000GENOMES,GMI,PERLEGEN,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.133186 |
TXNRD2 | chr22 | 19926718 | 19926718 | rs34433567 | + | - | -/A | insertion | intron | 9 | 1000GENOMES,ABI,BUSHMAN,HGSV,HUMANGENOME_JCVI,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 0.783226 |
TXNRD2 | chr22 | 19927124 | 19927125 | rs72550816 | - | G | -/C | deletion | intron | 4 | 1000GENOMES,LUNTER,SNP500CANCER,TISHKOFF, | 2 | 0.034082 |
TXNRD2 | chr22 | 19927145 | 19927146 | rs5748489 | + | A | A/C | single | intron | 19 | 1000GENOMES,ABI,AFFY,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SC_SNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.308264 |
TXNRD2 | chr22 | 19927187 | 19927188 | rs143721127 | + | G | C/G | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.034435 |
TXNRD2 | chr22 | 19927286 | 19927287 | rs114214004 | + | G | G/T | single | intron,near-gene-5 | 1 | 1000GENOMES, | 2 | 0.986498 |
TXNRD2 | chr22 | 19927692 | 19927693 | rs9332311 | + | G | A/G | single | intron,near-gene-5 | 9 | 1000GENOMES,BCMHGSC_JDW,BL,COMPLETE_GENOMICS,EGP_SNPS,GMI,PJP,SC_SNP,SSMP, | 2 | 0.217373 |
TXNRD2 | chr22 | 19927999 | 19928000 | rs9332314 | + | C | C/T | single | intron,near-gene-5 | 5 | 1000GENOMES,EGP_SNPS,ILLUMINA,KRIBB_YJKIM,SNP500CANCER, | 2 | 0.974972 |
TXNRD2 | chr22 | 19928021 | 19928022 | rs1800706 | + | G | A/G | single | intron,near-gene-5 | 15 | 1000GENOMES,BCMHGSC_JDW,BL,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HGBASE,ILLUMINA,RIKENSNPRC,SC_SNP,SNP500CANCER,SSMP,TISHKOFF,YUSUKE, | 2 | 0.217680 |
TXNRD2 | chr22 | 19928091 | 19928092 | rs2075507 | + | G | A/G | single | intron,near-gene-5 | 26 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGBASE,HGSV,ILLUMINA-UK,KIDDLAB,PHARMGKB_PPII,PJP,RIKENSNPRC,SC_JCM,SC_SNP,SNP500CANCER,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP,YUSUKE, | 2 | 0.642659 |
TXNRD2 | chr22 | 19928198 | 19928199 | rs9332315 | + | T | C/T | single | intron,near-gene-5 | 6 | 1000GENOMES,EGP_SNPS,ILLUMINA,KRIBB_YJKIM,SNP500CANCER,SSMP, | 2 | 0.011201 |
TXNRD2 | chr22 | 19928324 | 19928325 | rs45478499 | + | G | A/G | single | intron,near-gene-5 | 3 | 1000GENOMES,PHARMGKB_PPII,TISHKOFF, | 2 | 0.011527 |
TXNRD2 | chr22 | 19928353 | 19928354 | rs45521239 | + | G | A/G | single | intron,near-gene-5 | 3 | 1000GENOMES,PHARMGKB_PPII,TISHKOFF, | 2 | 0.010807 |
TXNRD2 | chr22 | 19928581 | 19928582 | rs45551837 | + | G | A/G | single | intron,near-gene-5 | 6 | 1000GENOMES,COMPLETE_GENOMICS,HGSV,ILLUMINA-UK,PHARMGKB_PPII,SSMP, | 2 | 0.038497 |
TXNRD2 | chr22 | 19928631 | 19928632 | rs138696259 | + | C | C/G | single | intron,near-gene-5 | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.987144 |
TXNRD2 | chr22 | 19928805 | 19928806 | rs4646310 | + | G | A/G | single | intron,near-gene-5 | 16 | 1000GENOMES,ABI,COMPLETE_GENOMICS,CSHL-HAPMAP,HUMANGENOME_JCVI,ILLUMINA,IMCJ-GDT,KRIBB_YJKIM,KYUGEN,PHARMGKB_PPII,PJP,RIKENSNPRC,SNP500CANCER,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.110362 |
TXNRD2 | chr22 | 19928883 | 19928884 | rs2020917 | + | C | C/T | single | intron,near-gene-5 | 16 | 1000GENOMES,BRINCOR,COMPLETE_GENOMICS,GMI,ILLUMINA,IMCJ-GDT,KRIBB_YJKIM,KYUGEN,PHARMGKB_PPII,RIKENSNPRC,SC_SNP,SI_EXO,SNP500CANCER,SSMP,TISHKOFF,YUSUKE, | 2 | 0.776523 |
TXNRD2 | chr22 | 19928945 | 19928946 | rs45559342 | + | G | A/G | single | intron,near-gene-5 | 5 | 1000GENOMES,BUSHMAN,ILLUMINA,PHARMGKB_PPII,SNP500CANCER, | 2 | 0.011646 |
TXNRD2 | chr22 | 19929026 | 19929027 | rs13306278 | + | C | C/T | single | intron,near-gene-5 | 11 | 1000GENOMES,BCMHGSC_JDW,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,IMCJ-GDT,PHARMGKB_PPII,PJP,SI_EXO,SSMP, | 2 | 0.917507 |
TXNRD2 | chr22 | 19929141 | 19929141 | rs45511293 | + | - | -/G | insertion | intron,near-gene-5 | 4 | 1000GENOMES,LUNTER,PHARMGKB_PPII,TISHKOFF, | 2 | 0.953761 |
XDH | chr2 | 31557268 | 31557269 | rs6752058 | + | C | A/C/G | single | untranslated-3 | 12 | 1000GENOMES,BCM-HGSC-SUB,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PERLEGEN,SSMP,TISHKOFF, | 3 | 0.247817 |
XDH | chr2 | 31557307 | 31557308 | rs1054889 | + | G | A/G | single | untranslated-3 | 18 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,LEE,PERLEGEN,PJP,SSMP,TSC-CSHL,YUSUKE, | 2 | 0.429583 |
XDH | chr2 | 31557346 | 31557347 | rs6710015 | + | T | C/T | single | untranslated-3 | 17 | 1000GENOMES,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF, | 3 | 0.436189 |
XDH | chr2 | 31557742 | 31557743 | rs45488100 | - | T | A/G | single | untranslated-3 | 7 | 1000GENOMES,BUSHMAN,EGP_SNPS,GMI,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.968354 |
XDH | chr2 | 31557945 | 31557946 | rs45532535 | - | A | C/T | single | untranslated-3 | 2 | 1000GENOMES,EGP_SNPS, | 2 | 0.016652 |
XDH | chr2 | 31558115 | 31558117 | rs10590467 | + | AG | -/AG | deletion | untranslated-3 | 11 | 1000GENOMES,ABI,BCMHGSC_JDW,DEVINE_LAB,EGP_SNPS,GMI,HGSV,HUMANGENOME_JCVI,LUNTER,PJP,SSMP, | 2 | 0.116456 |
XDH | chr2 | 31558305 | 31558306 | rs1042039 | + | T | C/T | single | untranslated-3 | 20 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,LEE,PERLEGEN,PJP,SSMP,TSC-CSHL, | 3 | 0.466131 |
XDH | chr2 | 31558782 | 31558783 | rs45593434 | - | C | C/G | single | untranslated-3 | 8 | 1000GENOMES,BUSHMAN,EGP_SNPS,GMI,ILLUMINA,NHLBI-ESP,SSMP,TISHKOFF, | 2 | 0.033249 |
XDH | chr2 | 31559094 | 31559095 | rs2268800 | + | G | C/G | single | intron | 16 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,EGP_SNPS,ENSEMBL,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PJP,SSMP,YUSUKE, | 2 | 0.445286 |
XDH | chr2 | 31559676 | 31559677 | rs202047649 | + | T | -/T | deletion | intron | 1 | 1000GENOMES, | 2 | 0.020661 |
XDH | chr2 | 31559688 | 31559689 | rs207436 | - | A | C/T | single | intron | 13 | 1000GENOMES,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,ILLUMINA-UK,KWOK,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.976691 |
XDH | chr2 | 31559950 | 31559951 | rs2268801 | + | C | C/T | single | intron | 8 | 1000GENOMES,EGP_SNPS,ENSEMBL,GMI,ILLUMINA,SSMP,TISHKOFF,YUSUKE, | 2 | 0.922716 |
XDH | chr2 | 31560148 | 31560149 | rs115102142 | + | A | A/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.979530 |
XDH | chr2 | 31560381 | 31560382 | rs10188919 | + | T | C/T | single | intron | 7 | 1000GENOMES,EGP_SNPS,HGSV,ILLUMINA-UK,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.011844 |
XDH | chr2 | 31560571 | 31560572 | rs45564939 | - | G | C/T | single | missense | 6 | 1000GENOMES,CLINSEQ_SNP,EGP_SNPS,EXOME_CHIP,ILLUMINA,NHLBI-ESP, | 2 | 0.989163 |
XDH | chr2 | 31560616 | 31560617 | rs181743036 | + | C | C/T | single | missense | 1 | 1000GENOMES, | 2 | 0.975666 |
XDH | chr2 | 31560950 | 31560951 | rs45505391 | - | A | C/T | single | intron | 5 | 1000GENOMES,COMPLETE_GENOMICS,EGP_SNPS,HGSV,TISHKOFF, | 2 | 0.018628 |
XDH | chr2 | 31561528 | 31561529 | rs80327583 | + | T | C/T | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.017431 |
XDH | chr2 | 31561620 | 31561621 | rs112521097 | + | G | A/G | single | intron | 5 | 1000GENOMES,BL,COMPLETE_GENOMICS,GMI,SSMP, | 2 | 0.428048 |
XDH | chr2 | 31561734 | 31561735 | rs207439 | - | A | C/T | single | intron | 14 | 1000GENOMES,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HUMANGENOME_JCVI,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.979433 |
XDH | chr2 | 31561795 | 31561796 | rs138572729 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.016988 |
XDH | chr2 | 31561865 | 31561866 | rs141674738 | + | C | C/T | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.928834 |
XDH | chr2 | 31561926 | 31561927 | rs113295448 | + | G | G/T | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.982569 |
XDH | chr2 | 31562411 | 31562412 | rs207440 | - | C | A/G | single | coding-synon | 16 | 1000GENOMES,APPLERA_GI,BUSHMAN,CLINSEQ_SNP,EGP_SNPS,ILLUMINA,KRIBB_YJKIM,KWOK,NHLBI-ESP,PHARMGKB_AB_DME,SC_JCM,SEATTLESEQ,SI_EXO,SNP500CANCER,SSMP,TISHKOFF, | 2 | 0.052303 |
XDH | chr2 | 31563013 | 31563014 | rs207441 | - | A | G/T | single | intron | 22 | 1000GENOMES,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.981235 |
XDH | chr2 | 31563106 | 31563107 | rs45539633 | - | C | G/T | single | intron | 3 | 1000GENOMES,EGP_SNPS,HGSV, | 2 | 0.984362 |
XDH | chr2 | 31563116 | 31563117 | rs45463093 | - | T | A/G | single | intron | 5 | 1000GENOMES,COMPLETE_GENOMICS,EGP_SNPS,HGSV,TISHKOFF, | 2 | 0.977618 |
XDH | chr2 | 31563397 | 31563398 | rs207442 | - | G | C/G | single | intron | 17 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.019169 |
XDH | chr2 | 31563475 | 31563476 | rs11893429 | + | C | C/T | single | intron | 4 | 1000GENOMES,CSHL-HAPMAP,EGP_SNPS,TISHKOFF, | 2 | 0.979846 |
XDH | chr2 | 31563796 | 31563797 | rs207444 | - | A | C/T | single | intron | 27 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SNP500CANCER,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.981973 |
XDH | chr2 | 31563884 | 31563885 | rs207445 | + | C | C/T | single | intron | 10 | 1000GENOMES,AFFY,BUSHMAN,EGP_SNPS,KRIBB_YJKIM,KWOK,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.962530 |
XDH | chr2 | 31564304 | 31564305 | rs35059671 | + | T | C/T | single | intron | 8 | 1000GENOMES,ABI,BUSHMAN,EGP_SNPS,ENSEMBL,ILLUMINA,NHLBI-ESP,TISHKOFF, | 2 | 0.019377 |
XDH | chr2 | 31564897 | 31564898 | rs10084228 | + | C | C/T | single | intron | 5 | 1000GENOMES,EGP_SNPS,ILLUMINA-UK,TISHKOFF,WI_SSAHASNP, | 2 | 0.988186 |
XDH | chr2 | 31565315 | 31565316 | rs35235275 | + | C | C/T | single | intron | 13 | 1000GENOMES,BCM-HGSC-SUB,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.778390 |
XDH | chr2 | 31565359 | 31565360 | rs12614330 | + | C | C/T | single | intron | 12 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,ILLUMINA,SSMP, | 2 | 0.546650 |
XDH | chr2 | 31565364 | 31565365 | rs45598233 | - | C | A/G | single | intron | 2 | 1000GENOMES,EGP_SNPS, | 2 | 0.011064 |
XDH | chr2 | 31565438 | 31565439 | rs45471493 | - | A | A/T | single | intron | 3 | 1000GENOMES,EGP_SNPS,TISHKOFF, | 2 | 0.015345 |
XDH | chr2 | 31565576 | 31565576 | rs11465197 | + | - | -/A | insertion | intron | 12 | 1000GENOMES,BILGI_BIOE,BL,BUSHMAN,DEVINE_LAB,GMI,HGSV,HUMANGENOME_JCVI,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 0.019707 |
XDH | chr2 | 31565602 | 31565604 | rs45564545 | - | GA | -/TC | deletion | intron | 11 | 1000GENOMES,BILGI_BIOE,BL,DEVINE_LAB,EGP_SNPS,GMI,HUMANGENOME_JCVI,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 0.980786 |
XDH | chr2 | 31566002 | 31566003 | rs207447 | - | C | A/G | single | intron | 4 | 1000GENOMES,BUSHMAN,KWOK,SC_JCM, | 2 | 0.012844 |
XDH | chr2 | 31566021 | 31566022 | rs207448 | - | C | C/G | single | intron | 20 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KWOK,PJP,SC_JCM,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.980383 |
XDH | chr2 | 31566075 | 31566076 | rs111830531 | + | T | C/T | single | intron | 2 | 1000GENOMES,BUSHMAN, | 2 | 0.017431 |
XDH | chr2 | 31566123 | 31566124 | rs169596 | - | G | C/T | single | intron | 13 | 1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,ILLUMINA,KRIBB_YJKIM,KWOK,SC_JCM,SSMP,TISHKOFF, | 2 | 0.555876 |
XDH | chr2 | 31566296 | 31566299 | rs199694787 | + | TTG | -/TTG | deletion | intron | 1 | 1000GENOMES, | 2 | 0.013774 |
XDH | chr2 | 31566535 | 31566536 | rs207449 | - | T | A/G | single | intron | 9 | 1000GENOMES,BGI,BL,GMI,KWOK,PJP,SC_JCM,SSMP,WI_SSAHASNP, | 2 | 0.020505 |
XDH | chr2 | 31566635 | 31566636 | rs45449406 | - | G | A/C | single | intron | 2 | 1000GENOMES,EGP_SNPS, | 2 | 0.013102 |
XDH | chr2 | 31567046 | 31567047 | rs207450 | - | T | A/C | single | intron | 20 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.018868 |
XDH | chr2 | 31567242 | 31567243 | rs207451 | - | C | G/T | single | intron | 20 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.018464 |
XDH | chr2 | 31567288 | 31567289 | rs45613632 | - | T | A/G | single | intron | 3 | 1000GENOMES,BUSHMAN,EGP_SNPS, | 2 | 0.985605 |
XDH | chr2 | 31567297 | 31567298 | rs207452 | - | T | A/C | single | intron | 20 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.018916 |
XDH | chr2 | 31567631 | 31567632 | rs207454 | - | T | A/C | single | intron | 15 | 1000GENOMES,BCM_SSAHASNP,BGI,CLINSEQ_SNP,COMPLETE_GENOMICS,EGP_SNPS,GMI,ILLUMINA,KWOK,NHLBI-ESP,SC_JCM,SI_EXO,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.855561 |
XDH | chr2 | 31567926 | 31567927 | rs45549632 | - | C | A/G | single | intron | 6 | 1000GENOMES,EGP_SNPS,GMI,HGSV,ILLUMINA,SSMP, | 2 | 0.030136 |
XDH | chr2 | 31567928 | 31567929 | rs207455 | + | G | A/G | single | intron | 27 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.925726 |
XDH | chr2 | 31568245 | 31568246 | rs45555737 | - | C | C/G | single | intron | 3 | 1000GENOMES,EGP_SNPS,GMI, | 2 | 0.021151 |
XDH | chr2 | 31568347 | 31568348 | rs7595188 | + | A | A/G | single | intron | 10 | 1000GENOMES,AFFY,EGP_SNPS,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.938858 |
XDH | chr2 | 31568360 | 31568361 | rs4951978 | + | T | C/T | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,ILLUMINA,PJP,SC_SNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.606073 |
XDH | chr2 | 31568564 | 31568565 | rs45472702 | - | G | C/T | single | intron | 2 | BUSHMAN,EGP_SNPS, | 2 | 0.989474 |
XDH | chr2 | 31568607 | 31568608 | rs7583231 | + | T | C/T | single | intron | 6 | 1000GENOMES,EGP_SNPS,GMI,ILLUMINA,SSMP,WI_SSAHASNP, | 2 | 0.020270 |
XDH | chr2 | 31568725 | 31568726 | rs9308919 | + | T | C/T | single | intron | 24 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SC_SNP,SNP500CANCER,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.790751 |
XDH | chr2 | 31568913 | 31568914 | rs45444396 | - | T | A/C | single | intron | 3 | 1000GENOMES,EGP_SNPS,TISHKOFF, | 2 | 0.984362 |
XDH | chr2 | 31569207 | 31569208 | rs45481596 | - | C | A/G | single | intron | 4 | 1000GENOMES,BUSHMAN,EGP_SNPS,ILLUMINA, | 2 | 0.016568 |
XDH | chr2 | 31569304 | 31569305 | rs7598968 | + | A | A/G | single | intron | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.205734 |
XDH | chr2 | 31569309 | 31569310 | rs10188839 | + | G | A/G | single | intron | 10 | 1000GENOMES,BCMHGSC_JDW,EGP_SNPS,ENSEMBL,HGSV,ILLUMINA,ILLUMINA-UK,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.074215 |
XDH | chr2 | 31569373 | 31569374 | rs7572658 | + | C | C/G | single | intron | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.206998 |
XDH | chr2 | 31569470 | 31569471 | rs7599175 | + | A | A/G | single | intron | 22 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KRIBB_YJKIM,PJP,SI_EXO,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.202575 |
XDH | chr2 | 31569592 | 31569593 | rs114439502 | + | C | A/C | single | intron | 4 | 1000GENOMES,ILLUMINA,NHLBI-ESP,TISHKOFF, | 2 | 0.011324 |
XDH | chr2 | 31569659 | 31569660 | rs45547640 | - | T | A/C | single | missense | 5 | 1000GENOMES,EGP_SNPS,EXOME_CHIP,GMI,ILLUMINA, | 2 | 0.989380 |
XDH | chr2 | 31569746 | 31569747 | rs45511600 | - | C | A/G | single | intron | 5 | 1000GENOMES,BUSHMAN,EGP_SNPS,NHLBI-ESP,TISHKOFF, | 2 | 0.015293 |
XDH | chr2 | 31569922 | 31569923 | rs13409029 | + | G | A/G | single | intron | 8 | 1000GENOMES,BCMHGSC_JDW,EGP_SNPS,ENSEMBL,ILLUMINA-UK,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.066723 |
XDH | chr2 | 31570068 | 31570069 | rs1366811 | + | A | A/G | single | intron | 25 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KRIBB_YJKIM,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 2 | 0.217308 |
XDH | chr2 | 31570086 | 31570087 | rs45603333 | - | T | A/G | single | intron | 3 | 1000GENOMES,BUSHMAN,EGP_SNPS, | 2 | 0.983065 |
XDH | chr2 | 31570114 | 31570115 | rs1366812 | + | G | C/G | single | intron | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_JCM,SC_SNP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.653035 |
XDH | chr2 | 31570375 | 31570376 | rs1366813 | + | T | C/T | single | intron | 29 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,NHLBI-ESP,PJP,SC_JCM,SC_SNP,SI_EXO,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 2 | 0.778132 |
XDH | chr2 | 31570392 | 31570393 | rs45619033 | - | C | C/G | single | missense | 8 | 1000GENOMES,CORNELL,EGP_SNPS,EXOME_CHIP,ILLUMINA,NHLBI-ESP,PHARMGKB_AB_DME,SNP500CANCER, | 2 | 0.012859 |
XDH | chr2 | 31570589 | 31570590 | rs77716518 | + | G | C/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.011760 |
XDH | chr2 | 31570625 | 31570626 | rs4952083 | + | C | C/T | single | intron | 21 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,SI_EXO,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.194211 |
XDH | chr2 | 31570630 | 31570631 | rs4952084 | + | A | A/G | single | intron | 21 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,SI_EXO,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.193711 |
XDH | chr2 | 31570688 | 31570689 | rs4952085 | + | G | A/G | single | intron | 24 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.802216 |
XDH | chr2 | 31571026 | 31571027 | rs45452492 | - | C | A/G | single | intron | 4 | 1000GENOMES,BUSHMAN,EGP_SNPS,TISHKOFF, | 2 | 0.016129 |
XDH | chr2 | 31571196 | 31571197 | rs45604135 | - | G | C/T | single | coding-synon | 10 | 1000GENOMES,BUSHMAN,CLINSEQ_SNP,CORNELL,EGP_SNPS,ILLUMINA,NHLBI-ESP,PHARMGKB_AB_DME,SNP500CANCER,TISHKOFF, | 2 | 0.982947 |
XDH | chr2 | 31571240 | 31571241 | rs13415401 | + | G | C/G | single | intron | 20 | 1000GENOMES,BCM-HGSC-SUB,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,EGP_SNPS,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,NHLBI-ESP,PERLEGEN,PJP,SI_EXO,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.783663 |
XDH | chr2 | 31571430 | 31571431 | rs45521940 | - | C | A/G | single | intron | 5 | 1000GENOMES,BUSHMAN,EGP_SNPS,SSMP,TISHKOFF, | 2 | 0.018589 |
XDH | chr2 | 31571785 | 31571786 | rs1884725 | + | A | A/G | single | coding-synon | 30 | 1000GENOMES,ABI,APPLERA_GI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,NHLBI-ESP,PHARMGKB_AB_DME,PJP,SC_JCM,SEATTLESEQ,SI_EXO,SNP500CANCER,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 2 | 0.214128 |
XDH | chr2 | 31571869 | 31571870 | rs45517831 | - | T | A/G | single | intron | 1 | EGP_SNPS, | 2 | 0.989362 |
XDH | chr2 | 31571883 | 31571884 | rs45465405 | - | T | A/G | single | intron | 5 | 1000GENOMES,EGP_SNPS,NHLBI-ESP,SSMP,TISHKOFF, | 2 | 0.981826 |
XDH | chr2 | 31572075 | 31572076 | rs7557095 | + | A | A/C | single | intron | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.214195 |
XDH | chr2 | 31572184 | 31572185 | rs7583694 | + | C | C/G | single | intron | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.177834 |
XDH | chr2 | 31572397 | 31572398 | rs1429374 | + | A | A/G | single | intron | 18 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,PJP,SC_SNP,SSMP,TISHKOFF,TSC-CSHL,YUSUKE, | 2 | 0.357930 |
XDH | chr2 | 31572482 | 31572482 | rs11408029 | + | - | -/G/T | insertion | intron | 14 | 1000GENOMES,ABI,BILGI_BIOE,BL,BUSHMAN,DEVINE_LAB,EGP_SNPS,GMI,HGSV,HUMANGENOME_JCVI,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 0.193299 |
XDH | chr2 | 31572484 | 31572484 | rs199797389 | + | - | -/T | insertion | intron | 1 | 1000GENOMES, | 2 | 0.256657 |
XDH | chr2 | 31572731 | 31572732 | rs13419410 | + | C | C/T | single | intron | 13 | 1000GENOMES,BCMHGSC_JDW,BUSHMAN,CLINSEQ_SNP,EGP_SNPS,ENSEMBL,ILLUMINA,ILLUMINA-UK,NHLBI-ESP,SI_EXO,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.944674 |
XDH | chr2 | 31573345 | 31573346 | rs11680208 | + | A | A/G | single | intron | 17 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.280946 |
XDH | chr2 | 31573454 | 31573455 | rs11889858 | + | A | A/T | single | intron | 10 | 1000GENOMES,ABI,BCMHGSC_JDW,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,HGSV,PJP,SSMP,TISHKOFF, | 2 | 0.938240 |
XDH | chr2 | 31573519 | 31573520 | rs45583538 | - | A | C/T | single | intron | 6 | 1000GENOMES,EGP_SNPS,GMI,HGSV,ILLUMINA-UK,TISHKOFF, | 2 | 0.025869 |
XDH | chr2 | 31573736 | 31573737 | rs45561543 | - | C | A/G | single | intron | 10 | 1000GENOMES,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.054339 |
XDH | chr2 | 31573768 | 31573769 | rs45554434 | - | G | C/T | single | intron | 11 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.945286 |
XDH | chr2 | 31573809 | 31573812 | rs45491299 | - | ACT | -/AGT | deletion | intron | 11 | 1000GENOMES,BCMHGSC_JDW,BILGI_BIOE,DEVINE_LAB,EGP_SNPS,GMI,HGSV,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 0.705659 |
XDH | chr2 | 31573852 | 31573853 | rs45612243 | - | A | C/T | single | intron | 3 | 1000GENOMES,BUSHMAN,EGP_SNPS, | 2 | 0.016484 |
XDH | chr2 | 31574188 | 31574189 | rs45488396 | - | T | A/G | single | intron | 4 | 1000GENOMES,EGP_SNPS,ILLUMINA-UK,TISHKOFF, | 2 | 0.988166 |
XDH | chr2 | 31574190 | 31574191 | rs7571290 | + | C | C/T | single | intron | 14 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.945593 |
XDH | chr2 | 31574213 | 31574214 | rs11124258 | + | C | C/T | single | intron | 15 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF, | 2 | 0.360994 |
XDH | chr2 | 31574333 | 31574334 | rs7571426 | + | C | C/G | single | intron | 19 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.205537 |
XDH | chr2 | 31574453 | 31574454 | rs7571721 | + | G | A/G | single | intron | 5 | 1000GENOMES,EGP_SNPS,ILLUMINA,SSMP,WI_SSAHASNP, | 2 | 0.024112 |
XDH | chr2 | 31574888 | 31574889 | rs61578078 | + | A | A/G | single | intron | 5 | 1000GENOMES,HGSV,ILLUMINA,ILLUMINA-UK,TISHKOFF, | 2 | 0.971560 |
XDH | chr2 | 31574909 | 31574910 | rs114323079 | + | T | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.011760 |
XDH | chr2 | 31574930 | 31574931 | rs35408744 | + | G | A/G | single | intron | 8 | 1000GENOMES,ABI,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.026123 |
XDH | chr2 | 31574980 | 31574981 | rs66801306 | + | T | C/T | single | intron | 9 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.056293 |
XDH | chr2 | 31575314 | 31575315 | rs11124259 | + | A | A/C | single | intron | 15 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,PJP,SSMP,TISHKOFF, | 2 | 0.359945 |
XDH | chr2 | 31575665 | 31575666 | rs56385520 | + | C | C/T | single | intron | 7 | 1000GENOMES,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.813761 |
XDH | chr2 | 31575670 | 31575671 | rs12618694 | + | C | C/T | single | intron | 13 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,PERLEGEN,SSMP, | 2 | 0.617876 |
XDH | chr2 | 31575920 | 31575921 | rs2195502 | + | T | C/T | single | intron | 14 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,PERLEGEN,SSMP,TISHKOFF,TSC-CSHL, | 3 | 0.639235 |
XDH | chr2 | 31576073 | 31576074 | rs1896846 | + | C | C/G | single | intron | 19 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.195695 |
XDH | chr2 | 31576187 | 31576188 | rs66479838 | + | G | A/G | single | intron | 8 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,SSMP,TISHKOFF, | 2 | 0.053065 |
XDH | chr2 | 31576497 | 31576498 | rs2284831 | + | T | C/T | single | intron | 15 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA-UK,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP,YUSUKE, | 2 | 0.704888 |
XDH | chr2 | 31576633 | 31576634 | rs13414618 | + | C | C/T | single | intron | 14 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,KRIBB_YJKIM,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.367262 |
XDH | chr2 | 31576720 | 31576721 | rs73922348 | + | T | C/T | single | intron | 4 | 1000GENOMES,ILLUMINA,ILLUMINA-UK,TISHKOFF, | 2 | 0.025229 |
XDH | chr2 | 31576911 | 31576912 | rs115903524 | + | G | C/G | single | intron | 2 | 1000GENOMES,GMI, | 2 | 0.016536 |
XDH | chr2 | 31577234 | 31577235 | rs145214967 | + | T | C/T | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.017447 |
XDH | chr2 | 31577247 | 31577248 | rs75526523 | + | C | A/C | single | intron | 2 | 1000GENOMES,BUSHMAN, | 2 | 0.014220 |
XDH | chr2 | 31577437 | 31577438 | rs1072012 | + | C | C/G | single | intron | 22 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KRIBB_YJKIM,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.214450 |
XDH | chr2 | 31577549 | 31577550 | rs73922349 | + | T | C/T | single | intron | 3 | 1000GENOMES,ILLUMINA-UK,TISHKOFF, | 2 | 0.029358 |
XDH | chr2 | 31577872 | 31577873 | rs56166245 | + | A | A/G | single | intron | 3 | 1000GENOMES,HGSV,ILLUMINA, | 2 | 0.978242 |
XDH | chr2 | 31577879 | 31577880 | rs10174527 | + | A | A/C | single | intron | 17 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,ILLUMINA,ILLUMINA-UK,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.267032 |
XDH | chr2 | 31578248 | 31578249 | rs13384006 | + | T | C/T | single | intron | 14 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.730594 |
XDH | chr2 | 31578522 | 31578523 | rs1594158 | + | T | C/T | single | intron | 12 | 1000GENOMES,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA-UK,PERLEGEN,SSMP,TSC-CSHL, | 2 | 0.736706 |
XDH | chr2 | 31578668 | 31578669 | rs1594159 | + | G | C/G | single | intron | 11 | 1000GENOMES,ABI,BUSHMAN,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SC_JCM,SSAHASNP,SSMP,TSC-CSHL, | 2 | 0.054029 |
XDH | chr2 | 31578849 | 31578850 | rs73922350 | + | G | A/G | single | intron | 3 | 1000GENOMES,ILLUMINA-UK,TISHKOFF, | 2 | 0.024312 |
XDH | chr2 | 31578934 | 31578935 | rs75994329 | + | A | A/C | single | intron | 2 | 1000GENOMES,BUSHMAN, | 2 | 0.983945 |
XDH | chr2 | 31578968 | 31578969 | rs1594160 | + | A | A/C | single | intron | 21 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KRIBB_YJKIM,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.224401 |
XDH | chr2 | 31579333 | 31579334 | rs12712315 | + | G | C/G | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.779197 |
XDH | chr2 | 31579352 | 31579353 | rs73922351 | + | A | A/G | single | intron | 4 | 1000GENOMES,ILLUMINA,ILLUMINA-UK,TISHKOFF, | 2 | 0.975229 |
XDH | chr2 | 31579668 | 31579669 | rs62142912 | + | G | A/G | single | intron | 4 | 1000GENOMES,BCMHGSC_JDW,ENSEMBL,SSMP, | 2 | 0.018807 |
XDH | chr2 | 31579841 | 31579842 | rs73922352 | + | A | A/G | single | intron | 3 | 1000GENOMES,ILLUMINA-UK,TISHKOFF, | 2 | 0.976605 |
XDH | chr2 | 31580124 | 31580125 | rs113165174 | + | A | A/G | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.976147 |
XDH | chr2 | 31580249 | 31580250 | rs4951980 | + | A | A/T | single | intron | 16 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.357078 |
XDH | chr2 | 31580345 | 31580346 | rs75264945 | + | T | C/T | single | intron | 2 | 1000GENOMES,BUSHMAN, | 2 | 0.016062 |
XDH | chr2 | 31580483 | 31580484 | rs12478123 | + | C | C/T | single | intron | 16 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.263686 |
XDH | chr2 | 31580515 | 31580518 | rs71928269 | + | ATA | -/ATA | deletion | intron | 7 | 1000GENOMES,BILGI_BIOE,DEVINE_LAB,GMI,LUNTER,PJP,SSMP, | 2 | 0.441690 |
XDH | chr2 | 31580545 | 31580546 | rs12478183 | + | G | A/G | single | intron | 11 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA,PJP,SSMP, | 2 | 0.480752 |
XDH | chr2 | 31580772 | 31580773 | rs116531452 | + | C | C/G | single | intron | 1 | 1000GENOMES, | 2 | 0.987805 |
XDH | chr2 | 31580793 | 31580794 | rs10184437 | + | A | A/C | single | intron | 16 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PERLEGEN,PJP,SSMP,WUGSC_SSAHASNP, | 2 | 0.274207 |
XDH | chr2 | 31581175 | 31581176 | rs7597682 | + | G | A/G | single | intron | 3 | 1000GENOMES,TISHKOFF,WI_SSAHASNP, | 2 | 0.011760 |
XDH | chr2 | 31581202 | 31581203 | rs114248970 | + | T | C/T | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.016536 |
XDH | chr2 | 31581438 | 31581439 | rs7597755 | + | C | C/T | single | intron | 12 | 1000GENOMES,BCM-HGSC-SUB,BGI,BUSHMAN,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.864955 |
XDH | chr2 | 31581705 | 31581706 | rs1579464 | + | T | C/T | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.393967 |
XDH | chr2 | 31582284 | 31582285 | rs72864237 | + | C | C/T | single | intron | 5 | 1000GENOMES,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF, | 2 | 0.811468 |
XDH | chr2 | 31582311 | 31582312 | rs77097273 | + | C | C/T | single | intron | 5 | 1000GENOMES,BUSHMAN,GMI,SSMP,TISHKOFF, | 2 | 0.957798 |
XDH | chr2 | 31582441 | 31582442 | rs151220534 | + | C | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.985767 |
XDH | chr2 | 31582646 | 31582647 | rs111687415 | + | G | A/G | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.015124 |
XDH | chr2 | 31583011 | 31583012 | rs112495433 | + | G | A/G | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.015596 |
XDH | chr2 | 31583256 | 31583257 | rs10170372 | + | C | C/T | single | intron | 12 | 1000GENOMES,ABI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.628781 |
XDH | chr2 | 31583374 | 31583378 | rs146614493 | + | AAAT | -/AAAT | deletion | intron | 2 | 1000GENOMES,LUNTER, | 2 | 0.014692 |
XDH | chr2 | 31583417 | 31583418 | rs58549655 | + | T | C/T | single | intron | 10 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,PJP,SSMP,TISHKOFF, | 2 | 0.267490 |
XDH | chr2 | 31583443 | 31583444 | rs55676250 | + | G | A/G | single | intron | 6 | 1000GENOMES,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,SSMP, | 2 | 0.054587 |
XDH | chr2 | 31583455 | 31583456 | rs57418374 | + | T | A/T | single | intron | 11 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSMP,TISHKOFF, | 2 | 0.392873 |
XDH | chr2 | 31583730 | 31583731 | rs145667959 | + | A | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.985308 |
XDH | chr2 | 31583747 | 31583748 | rs1835170 | + | T | G/T | single | intron | 10 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA-UK,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.282450 |
XDH | chr2 | 31583912 | 31583913 | rs138226138 | + | T | C/T | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.017906 |
XDH | chr2 | 31583963 | 31583964 | rs1835171 | + | A | A/G | single | intron | 15 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.608040 |
XDH | chr2 | 31584034 | 31584035 | rs992137 | + | C | C/T | single | intron | 9 | 1000GENOMES,ABI,BUSHMAN,GMI,ILLUMINA,KRIBB_YJKIM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.963519 |
XDH | chr2 | 31584052 | 31584053 | rs73922354 | + | G | A/G | single | intron | 3 | 1000GENOMES,ILLUMINA-UK,TISHKOFF, | 2 | 0.027982 |
XDH | chr2 | 31584320 | 31584321 | rs992138 | + | G | A/G | single | intron | 10 | 1000GENOMES,ABI,BUSHMAN,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.034693 |
XDH | chr2 | 31584529 | 31584530 | rs3820922 | - | T | A/G | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PERLEGEN,PJP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.603423 |
XDH | chr2 | 31584685 | 31584686 | rs113394172 | + | A | A/C | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.984411 |
XDH | chr2 | 31584838 | 31584839 | rs6543628 | + | G | A/G | single | intron | 19 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SSMP,WI_SSAHASNP, | 2 | 0.777271 |
XDH | chr2 | 31584873 | 31584874 | rs34525014 | + | A | A/T | single | intron | 8 | 1000GENOMES,ABI,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.960587 |
XDH | chr2 | 31585074 | 31585075 | rs10190201 | + | G | A/G | single | intron | 12 | 1000GENOMES,BCM-HGSC-SUB,BGI,BL,COMPLETE_GENOMICS,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.360142 |
XDH | chr2 | 31585214 | 31585215 | rs17038412 | + | T | A/T | single | intron | 13 | 1000GENOMES,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SNP500CANCER,SSMP,TISHKOFF, | 2 | 0.283384 |
XDH | chr2 | 31585434 | 31585435 | rs7574484 | + | C | C/T | single | intron | 6 | 1000GENOMES,BUSHMAN,ILLUMINA,KRIBB_YJKIM,TISHKOFF,WI_SSAHASNP, | 2 | 0.984695 |
XDH | chr2 | 31585648 | 31585649 | rs7574920 | + | G | C/G | single | intron | 17 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA-UK,PERLEGEN,PJP,SNP500CANCER,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.384211 |
XDH | chr2 | 31585970 | 31585971 | rs45501295 | - | A | C/T | single | intron | 8 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,GMI,HGSV,SSMP,TISHKOFF, | 2 | 0.201354 |
XDH | chr2 | 31586082 | 31586083 | rs143425896 | + | C | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.989899 |
XDH | chr2 | 31586101 | 31586102 | rs13426715 | + | T | C/T | single | intron | 5 | 1000GENOMES,EGP_SNPS,HGSV,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.038136 |
XDH | chr2 | 31586153 | 31586154 | rs149713373 | + | C | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.989440 |
XDH | chr2 | 31586285 | 31586286 | rs76772830 | + | C | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.987805 |
XDH | chr2 | 31586361 | 31586362 | rs45582633 | - | C | C/G | single | intron | 3 | 1000GENOMES,EGP_SNPS,TISHKOFF, | 2 | 0.016061 |
XDH | chr2 | 31586375 | 31586376 | rs148459197 | + | G | A/G | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.011938 |
XDH | chr2 | 31586414 | 31586415 | rs45437499 | - | A | G/T | single | intron | 6 | 1000GENOMES,EGP_SNPS,HGSV,ILLUMINA,ILLUMINA-UK,TISHKOFF, | 2 | 0.039763 |
XDH | chr2 | 31586578 | 31586579 | rs45539133 | - | G | C/G | single | intron | 6 | 1000GENOMES,BUSHMAN,EGP_SNPS,HGSV,ILLUMINA-UK,TISHKOFF, | 2 | 0.961424 |
XDH | chr2 | 31586607 | 31586608 | rs45495991 | - | A | G/T | single | intron | 4 | 1000GENOMES,EGP_SNPS,ILLUMINA-UK,TISHKOFF, | 2 | 0.029139 |
XDH | chr2 | 31586860 | 31586861 | rs45506497 | - | G | C/T | single | intron | 4 | 1000GENOMES,BUSHMAN,EGP_SNPS,TISHKOFF, | 2 | 0.984401 |
XDH | chr2 | 31587141 | 31587142 | rs6760292 | + | A | A/C/G | single | intron | 12 | 1000GENOMES,BCM_SSAHASNP,BUSHMAN,EGP_SNPS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,NHLBI-ESP,SSMP,TISHKOFF, | 3 | 0.922033 |
XDH | chr2 | 31587234 | 31587235 | rs1018505 | + | G | A/G | single | intron | 23 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,PERLEGEN,PJP,SI_EXO,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.790933 |
XDH | chr2 | 31587448 | 31587449 | rs45554736 | - | G | C/T | single | intron | 3 | 1000GENOMES,BUSHMAN,EGP_SNPS, | 2 | 0.989856 |
XDH | chr2 | 31587510 | 31587511 | rs994727 | + | C | A/C | single | intron | 19 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.758773 |
XDH | chr2 | 31588219 | 31588220 | rs45467192 | - | T | A/G | single | intron | 5 | 1000GENOMES,EGP_SNPS,HGSV,ILLUMINA-UK,TISHKOFF, | 2 | 0.970042 |
XDH | chr2 | 31588287 | 31588288 | rs2365842 | + | T | A/T | single | intron | 25 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,PJP,SI_EXO,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 2 | 0.713115 |
XDH | chr2 | 31588436 | 31588437 | rs17011353 | + | C | C/T | single | intron | 10 | 1000GENOMES,AFFY,BGI,EGP_SNPS,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.933615 |
XDH | chr2 | 31588560 | 31588561 | rs1429376 | + | A | A/C | single | intron | 26 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SC_JCM,SNP500CANCER,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.213776 |
XDH | chr2 | 31588576 | 31588577 | rs17011356 | + | A | A/G | single | intron | 13 | 1000GENOMES,AFFY,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.715185 |
XDH | chr2 | 31588663 | 31588664 | rs12621192 | + | C | C/T | single | intron | 21 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SNP500CANCER,SSMP,TISHKOFF, | 2 | 0.728893 |
XDH | chr2 | 31589200 | 31589201 | rs45472693 | - | T | A/G | single | intron | 8 | 1000GENOMES,EGP_SNPS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.968697 |
XDH | chr2 | 31589413 | 31589414 | rs743163 | + | T | C/T | single | intron | 10 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,GMI,ILLUMINA,KRIBB_YJKIM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.287354 |
XDH | chr2 | 31589653 | 31589654 | rs13387204 | + | T | C/T | single | intron | 14 | 1000GENOMES,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,EGP_SNPS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.324298 |
XDH | chr2 | 31589846 | 31589847 | rs2295475 | + | G | A/G | single | coding-synon | 25 | 1000GENOMES,AFFY,APPLERA_GI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,PHARMGKB_AB_DME,PJP,SEATTLESEQ,SI_EXO,SNP500CANCER,SSMP,YUSUKE, | 2 | 0.234547 |
XDH | chr2 | 31590097 | 31590098 | rs17011359 | + | A | A/G | single | intron | 9 | 1000GENOMES,BCM-HGSC-SUB,BGI,EGP_SNPS,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.928288 |
XDH | chr2 | 31590155 | 31590156 | rs732436 | + | A | A/G | single | intron | 22 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,TSC-CSHL,YUSUKE, | 2 | 0.268066 |
XDH | chr2 | 31590205 | 31590206 | rs45565237 | - | G | C/T | single | intron | 4 | 1000GENOMES,EGP_SNPS,GMI,SSMP, | 2 | 0.982642 |
XDH | chr2 | 31590328 | 31590329 | rs732437 | + | G | A/G | single | intron | 7 | 1000GENOMES,AFFY,EGP_SNPS,ILLUMINA,KRIBB_YJKIM,TISHKOFF,TSC-CSHL, | 2 | 0.025354 |
XDH | chr2 | 31590377 | 31590378 | rs45517637 | - | G | C/T | single | intron | 5 | 1000GENOMES,BCMHGSC_JDW,EGP_SNPS,ENSEMBL,SSMP, | 2 | 0.978003 |
XDH | chr2 | 31590489 | 31590490 | rs45440994 | - | G | C/G | single | intron | 5 | 1000GENOMES,EGP_SNPS,GMI,HGSV,SSMP, | 2 | 0.979695 |
XDH | chr2 | 31590544 | 31590545 | rs2281548 | + | A | A/G | single | intron | 14 | 1000GENOMES,AFFY,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF,YUSUKE, | 2 | 0.695971 |
XDH | chr2 | 31590615 | 31590616 | rs45462299 | - | G | C/T | single | intron | 5 | 1000GENOMES,EGP_SNPS,HGSV,ILLUMINA-UK,TISHKOFF, | 2 | 0.969992 |
XDH | chr2 | 31590625 | 31590626 | rs2281549 | + | G | C/G | single | intron | 12 | 1000GENOMES,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,GMI,HGSV,ILLUMINA-UK,PERLEGEN,SSMP,TISHKOFF,YUSUKE, | 2 | 0.342114 |
XDH | chr2 | 31590696 | 31590697 | rs17011365 | + | G | A/G | single | intron | 7 | 1000GENOMES,AFFY,EGP_SNPS,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SNP500CANCER, | 2 | 0.029053 |
XDH | chr2 | 31590758 | 31590759 | rs2281550 | + | C | C/T | single | intron | 15 | 1000GENOMES,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SI_EXO,SNP500CANCER,SSMP,TISHKOFF,YUSUKE, | 3 | 0.713768 |
XDH | chr2 | 31590784 | 31590785 | rs761926 | + | C | C/G | single | intron | 24 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,PJP,SC_JCM,SI_EXO,SNP500CANCER,SSMP,TSC-CSHL,WI_SSAHASNP,YUSUKE, | 2 | 0.738686 |
XDH | chr2 | 31590916 | 31590917 | rs17011368 | + | T | C/T | single | missense | 18 | 1000GENOMES,AFFY,APPLERA_GI,CLINSEQ_SNP,EGP_SNPS,EXOME_CHIP,GMI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,PHARMGKB_AB_DME,SEATTLESEQ,SI_EXO,SNP500CANCER,SSMP,TISHKOFF, | 2 | 0.058112 |
XDH | chr2 | 31591384 | 31591388 | rs45446491 | - | CAGG | -/CCTG | deletion | intron | 3 | 1000GENOMES,EGP_SNPS,GMI, | 2 | 0.017050 |
XDH | chr2 | 31591760 | 31591761 | rs17395161 | + | T | C/T | single | intron | 6 | 1000GENOMES,EGP_SNPS,GMI,ILLUMINA,PERLEGEN,SSMP, | 2 | 0.016038 |
XDH | chr2 | 31592199 | 31592200 | rs45538232 | - | A | C/T | single | intron | 5 | 1000GENOMES,BUSHMAN,EGP_SNPS,ILLUMINA,TISHKOFF, | 2 | 0.010178 |
XDH | chr2 | 31592322 | 31592323 | rs2043013 | + | A | A/C | single | intron | 22 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.469124 |
XDH | chr2 | 31592402 | 31592403 | rs1366817 | + | A | A/G | single | intron | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.551130 |
XDH | chr2 | 31592411 | 31592412 | rs45550931 | - | A | C/T | single | intron | 4 | 1000GENOMES,EGP_SNPS,ILLUMINA-UK,TISHKOFF, | 2 | 0.026338 |
XDH | chr2 | 31592894 | 31592895 | rs2070293 | + | C | C/T | single | intron | 19 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HGBASE,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.500419 |
XDH | chr2 | 31592954 | 31592955 | rs45445692 | - | T | A/G | single | intron | 10 | 1000GENOMES,BCM-HGSC-SUB,BGI,BUSHMAN,EGP_SNPS,GMI,ILLUMINA,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.874155 |
XDH | chr2 | 31592975 | 31592976 | rs45620735 | - | C | A/G | single | intron | 4 | 1000GENOMES,BUSHMAN,EGP_SNPS,TISHKOFF, | 2 | 0.026560 |
XDH | chr2 | 31593081 | 31593082 | rs45505593 | - | T | A/G | single | intron | 4 | 1000GENOMES,BUSHMAN,EGP_SNPS,TISHKOFF, | 2 | 0.973019 |
XDH | chr2 | 31593124 | 31593125 | rs10181969 | + | T | C/T | single | intron | 10 | 1000GENOMES,BCM-HGSC-SUB,BGI,EGP_SNPS,HGSV,ILLUMINA-UK,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.102110 |
XDH | chr2 | 31593264 | 31593265 | rs17323225 | + | T | C/T | single | missense | 13 | 1000GENOMES,AFFY,APPLERA_GI,CLINSEQ_SNP,EGP_SNPS,EXOME_CHIP,GMI,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,PHARMGKB_AB_DME,SSMP, | 2 | 0.022365 |
XDH | chr2 | 31593432 | 31593433 | rs45594331 | - | T | A/G | single | intron | 4 | 1000GENOMES,BUSHMAN,EGP_SNPS,TISHKOFF, | 2 | 0.989020 |
XDH | chr2 | 31593451 | 31593452 | rs45522739 | - | A | G/T | single | intron | 4 | 1000GENOMES,BUSHMAN,EGP_SNPS,TISHKOFF, | 2 | 0.010980 |
XDH | chr2 | 31593503 | 31593504 | rs45473792 | - | A | C/T | single | intron | 5 | 1000GENOMES,BUSHMAN,EGP_SNPS,ILLUMINA,TISHKOFF, | 2 | 0.026627 |
XDH | chr2 | 31594012 | 31594013 | rs72790632 | + | G | A/G | single | intron | 4 | 1000GENOMES,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.019284 |
XDH | chr2 | 31594074 | 31594074 | rs150588223 | + | - | -/G | insertion | intron | 5 | 1000GENOMES,BILGI_BIOE,LUNTER,SSMP,TISHKOFF, | 2 | 0.938476 |
XDH | chr2 | 31594172 | 31594173 | rs2018410 | + | T | C/T | single | intron | 9 | 1000GENOMES,BL,COMPLETE_GENOMICS,GMI,HGSV,SSMP,TISHKOFF,TSC-CSHL,YUSUKE, | 2 | 0.281852 |
XDH | chr2 | 31594523 | 31594524 | rs11900892 | + | G | A/G | single | intron | 14 | 1000GENOMES,ABI,AFFY,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.190892 |
XDH | chr2 | 31594788 | 31594789 | rs13398137 | + | A | A/C | single | intron | 14 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BGI,COMPLETE_GENOMICS,EGP_SNPS,GMI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.820455 |
XDH | chr2 | 31595148 | 31595149 | rs61731081 | + | C | C/T | single | missense | 2 | AFFY_DM3_1,CORNELL, | 2 | 0.985714 |
XDH | chr2 | 31595394 | 31595395 | rs45443498 | - | G | C/T | single | intron | 4 | 1000GENOMES,EGP_SNPS,GMI,SSMP, | 2 | 0.983802 |
XDH | chr2 | 31595423 | 31595424 | rs10171290 | + | T | C/T | single | intron | 18 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.350148 |
XDH | chr2 | 31595573 | 31595574 | rs45532634 | - | A | C/T | single | intron | 8 | 1000GENOMES,BCM-HGSC-SUB,BGI,EGP_SNPS,HGSV,PJP,SSMP,TISHKOFF, | 2 | 0.061597 |
XDH | chr2 | 31595762 | 31595763 | rs45604535 | - | C | A/G | single | intron | 3 | 1000GENOMES,EGP_SNPS,TISHKOFF, | 2 | 0.029762 |
XDH | chr2 | 31595894 | 31595895 | rs45596941 | - | T | A/G | single | intron | 11 | 1000GENOMES,BCM-HGSC-SUB,BGI,COMPLETE_GENOMICS,EGP_SNPS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.885106 |
XDH | chr2 | 31596095 | 31596096 | rs35519594 | + | C | C/T | single | intron | 12 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BUSHMAN,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.852377 |
XDH | chr2 | 31596137 | 31596138 | rs115074795 | + | G | A/G | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.017406 |
XDH | chr2 | 31596518 | 31596519 | rs4549138 | + | G | A/G | single | intron | 10 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,GMI,PERLEGEN,SC_JCM,SSMP,TISHKOFF, | 2 | 0.300159 |
XDH | chr2 | 31596730 | 31596731 | rs17395224 | + | G | A/G | single | intron | 6 | 1000GENOMES,CLINSEQ_SNP,EGP_SNPS,GMI,NHLBI-ESP,PERLEGEN, | 2 | 0.021817 |
XDH | chr2 | 31596954 | 31596955 | rs4952086 | + | G | A/G | single | intron | 15 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.472973 |
XDH | chr2 | 31596962 | 31596963 | rs4952087 | + | T | C/T | single | intron | 15 | 1000GENOMES,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.472973 |
XDH | chr2 | 31597031 | 31597032 | rs12712316 | + | C | A/C | single | intron | 14 | 1000GENOMES,ABI,BUSHMAN,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.073791 |
XDH | chr2 | 31597129 | 31597130 | rs4952088 | + | G | A/G | single | intron | 17 | 1000GENOMES,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.487324 |
XDH | chr2 | 31597164 | 31597165 | rs45466195 | - | T | A/G | single | intron | 5 | 1000GENOMES,BCM-HGSC-SUB,EGP_SNPS,SSMP,TISHKOFF, | 2 | 0.956559 |
XDH | chr2 | 31597388 | 31597389 | rs111244539 | + | A | A/G | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.985321 |
XDH | chr2 | 31597409 | 31597410 | rs11894627 | + | A | A/G | single | intron | 16 | 1000GENOMES,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PJP,SSMP,TISHKOFF, | 2 | 0.476060 |
XDH | chr2 | 31597727 | 31597727 | rs45531939 | - | - | -/G | insertion | intron | 7 | 1000GENOMES,BILGI_BIOE,DEVINE_LAB,EGP_SNPS,LUNTER,SSMP,TISHKOFF, | 2 | 0.949239 |
XDH | chr2 | 31597768 | 31597769 | rs74428360 | + | G | C/G | single | intron | 4 | 1000GENOMES,BCM-HGSC-SUB,SSMP,TISHKOFF, | 2 | 0.050911 |
XDH | chr2 | 31597775 | 31597776 | rs116107660 | + | C | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.989547 |
XDH | chr2 | 31597921 | 31597922 | rs45576138 | - | G | C/T | single | intron | 5 | 1000GENOMES,BCM-HGSC-SUB,EGP_SNPS,SSMP,TISHKOFF, | 2 | 0.949102 |
XDH | chr2 | 31597929 | 31597930 | rs28412138 | + | A | A/G | single | intron | 8 | 1000GENOMES,COMPLETE_GENOMICS,EGP_SNPS,GMI,HGSV,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.665670 |
XDH | chr2 | 31597939 | 31597940 | rs28469567 | + | A | A/G | single | intron | 17 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.221465 |
XDH | chr2 | 31597993 | 31597994 | rs207401 | + | T | C/T | single | intron | 13 | 1000GENOMES,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,GMI,HGSV,KWOK,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.496378 |
XDH | chr2 | 31598121 | 31598122 | rs78634201 | + | A | A/G | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.987369 |
XDH | chr2 | 31598338 | 31598339 | rs45612839 | - | G | C/G | single | coding-synon | 8 | 1000GENOMES,BUSHMAN,CLINSEQ_SNP,CORNELL,EGP_SNPS,ILLUMINA,NHLBI-ESP,TISHKOFF, | 2 | 0.935848 |
XDH | chr2 | 31598484 | 31598485 | rs2070294 | + | T | C/T | single | intron | 15 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,ILLUMINA,SI_EXO,SSMP,YUSUKE, | 2 | 0.303196 |
XDH | chr2 | 31598809 | 31598810 | rs45449798 | - | T | A/G | single | intron | 4 | 1000GENOMES,EGP_SNPS,GMI,SSMP, | 2 | 0.986909 |
XDH | chr2 | 31598822 | 31598823 | rs2281547 | + | T | C/T | single | intron | 16 | 1000GENOMES,ABI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.324771 |
XDH | chr2 | 31598916 | 31598917 | rs1991541 | + | T | C/T | single | intron | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,PERLEGEN,PJP,SSMP,TISHKOFF,TSC-CSHL, | 3 | 0.773723 |
XDH | chr2 | 31598929 | 31598930 | rs45473506 | - | C | A/G | single | intron | 4 | 1000GENOMES,BUSHMAN,EGP_SNPS,TISHKOFF, | 2 | 0.032068 |
XDH | chr2 | 31599105 | 31599109 | rs45444891 | - | AGAT | -/ATCT | deletion | intron | 3 | 1000GENOMES,EGP_SNPS,LUNTER, | 2 | 0.010638 |
XDH | chr2 | 31599266 | 31599267 | rs45600934 | - | T | A/G | single | intron | 3 | 1000GENOMES,BUSHMAN,EGP_SNPS, | 2 | 0.978481 |
XDH | chr2 | 31599321 | 31599324 | rs45582035 | - | AGT | -/ACT | deletion | intron | 5 | 1000GENOMES,EGP_SNPS,GMI,LUNTER,SSMP, | 2 | 0.016470 |
XDH | chr2 | 31599389 | 31599390 | rs45489195 | - | A | A/T | single | intron | 3 | 1000GENOMES,EGP_SNPS,SSMP, | 2 | 0.013091 |
XDH | chr2 | 31599565 | 31599566 | rs1366816 | + | A | A/G | single | intron | 9 | 1000GENOMES,ABI,BUSHMAN,EGP_SNPS,HGSV,ILLUMINA-UK,SC_JCM,SSMP,TSC-CSHL, | 2 | 0.905947 |
XDH | chr2 | 31599644 | 31599644 | rs45600638 | - | - | -/GTTACTATT | insertion | cds-indel | 4 | 1000GENOMES,BILGI_BIOE,EGP_SNPS,LUNTER, | 2 | 0.473118 |
XDH | chr2 | 31599698 | 31599699 | rs4952089 | + | C | C/T | single | intron | 11 | 1000GENOMES,BCM-HGSC-SUB,BL,BUSHMAN,EGP_SNPS,GMI,HGSV,ILLUMINA-UK,SI_EXO,SSMP,WI_SSAHASNP, | 2 | 0.525308 |
XDH | chr2 | 31599848 | 31599849 | rs10172747 | + | G | C/G | single | intron | 5 | 1000GENOMES,EGP_SNPS,ILLUMINA-UK,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.027280 |
XDH | chr2 | 31600016 | 31600017 | rs45471294 | - | C | A/G | single | coding-synon | 10 | 1000GENOMES,CLINSEQ_SNP,CORNELL,EGP_SNPS,EXOME_CHIP,ILLUMINA,NHLBI-ESP,PHARMGKB_AB_DME,SNP500CANCER,SSMP, | 2 | 0.014113 |
XDH | chr2 | 31600145 | 31600146 | rs10187719 | + | T | C/T | single | intron | 15 | 1000GENOMES,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,NHLBI-ESP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.768390 |
XDH | chr2 | 31600234 | 31600235 | rs113335263 | + | C | C/T | single | intron | 6 | 1000GENOMES,BCM-HGSC-SUB,BUSHMAN,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.960550 |
XDH | chr2 | 31600359 | 31600360 | rs116271969 | + | C | A/C | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.015679 |
XDH | chr2 | 31600432 | 31600433 | rs72790636 | + | G | C/G | single | intron | 2 | 1000GENOMES,COMPLETE_GENOMICS, | 2 | 0.037156 |
XDH | chr2 | 31600557 | 31600558 | rs78655018 | + | C | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.972997 |
XDH | chr2 | 31600903 | 31600904 | rs202146590 | + | A | -/A | deletion | intron | 1 | 1000GENOMES, | 2 | 0.014692 |
XDH | chr2 | 31600968 | 31600969 | rs192492071 | + | A | A/G | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.938017 |
XDH | chr2 | 31600972 | 31600973 | rs9973789 | + | A | A/G | single | intron | 4 | 1000GENOMES,GMI,SSMP,WUGSC_SSAHASNP, | 2 | 0.895776 |
XDH | chr2 | 31600980 | 31600981 | rs186620844 | + | G | A/G | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.104224 |
XDH | chr2 | 31601073 | 31601074 | rs6709675 | + | C | A/C | single | intron | 3 | 1000GENOMES,BCM_SSAHASNP,ILLUMINA-UK, | 2 | 0.026147 |
XDH | chr2 | 31601283 | 31601284 | rs114281245 | + | T | A/T | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.013490 |
XDH | chr2 | 31601541 | 31601542 | rs147249797 | + | G | -/G | deletion | intron | 6 | 1000GENOMES,BILGI_BIOE,BL,LUNTER,SSMP,TISHKOFF, | 2 | 0.141873 |
XDH | chr2 | 31601899 | 31601900 | rs13423453 | + | A | A/T | single | intron | 5 | 1000GENOMES,EGP_SNPS,ILLUMINA-UK,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.972973 |
XDH | chr2 | 31601934 | 31601935 | rs45491696 | - | C | C/G | single | intron | 5 | 1000GENOMES,BCM-HGSC-SUB,EGP_SNPS,SSMP,TISHKOFF, | 2 | 0.039307 |
XDH | chr2 | 31602146 | 31602147 | rs45520334 | - | G | C/T | single | intron | 4 | 1000GENOMES,EGP_SNPS,ILLUMINA,SSMP, | 2 | 0.989020 |
XDH | chr2 | 31602222 | 31602223 | rs45493094 | - | G | A/C | single | intron | 5 | 1000GENOMES,BCM-HGSC-SUB,EGP_SNPS,SSMP,TISHKOFF, | 2 | 0.039274 |
XDH | chr2 | 31602790 | 31602791 | rs34929837 | - | T | A/T | single | missense | 10 | 1000GENOMES,APPLERA_GI,CLINSEQ_SNP,EGP_SNPS,EXOME_CHIP,ILLUMINA,NHLBI-ESP,PERLEGEN,PHARMGKB_AB_DME,SNP500CANCER, | 2 | 0.981743 |
XDH | chr2 | 31602840 | 31602841 | rs45612738 | - | G | C/T | single | coding-synon | 9 | 1000GENOMES,CLINSEQ_SNP,CORNELL,EGP_SNPS,EXOME_CHIP,ILLUMINA,NHLBI-ESP,PHARMGKB_AB_DME,SNP500CANCER, | 2 | 0.981882 |
XDH | chr2 | 31602896 | 31602897 | rs45591938 | - | C | A/G | single | intron | 4 | 1000GENOMES,EGP_SNPS,GMI,SSMP, | 2 | 0.016061 |
XDH | chr2 | 31603063 | 31603064 | rs45488000 | - | G | C/T | single | intron | 5 | 1000GENOMES,EGP_SNPS,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.978003 |
XDH | chr2 | 31603094 | 31603095 | rs45601433 | - | A | C/T | single | intron | 5 | 1000GENOMES,EGP_SNPS,GMI,ILLUMINA,SSMP, | 2 | 0.014370 |
XDH | chr2 | 31603133 | 31603134 | rs2163059 | + | A | A/G | single | intron | 19 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,GMI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SNP500CANCER,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 2 | 0.559970 |
XDH | chr2 | 31603303 | 31603304 | rs6733391 | + | T | A/T | single | intron | 14 | 1000GENOMES,BCM-HGSC-SUB,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,GMI,ILLUMINA,ILLUMINA-UK,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.448924 |
XDH | chr2 | 31603474 | 31603475 | rs45444799 | - | G | C/T | single | intron | 4 | 1000GENOMES,BUSHMAN,EGP_SNPS,TISHKOFF, | 2 | 0.986475 |
XDH | chr2 | 31603502 | 31603503 | rs45603041 | - | C | A/G | single | intron | 4 | 1000GENOMES,EGP_SNPS,ILLUMINA,ILLUMINA-UK, | 2 | 0.022184 |
XDH | chr2 | 31603606 | 31603607 | rs6718606 | + | C | C/G | single | intron | 16 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SNP500CANCER,SSMP,TISHKOFF, | 2 | 0.862944 |
XDH | chr2 | 31604445 | 31604446 | rs45552841 | - | A | C/T | single | intron | 6 | 1000GENOMES,EGP_SNPS,HGSV,ILLUMINA-UK,NHLBI-ESP,TISHKOFF, | 2 | 0.028390 |
XDH | chr2 | 31604771 | 31604772 | rs45550432 | - | A | C/T | single | intron | 4 | 1000GENOMES,EGP_SNPS,GMI,SSMP, | 2 | 0.012257 |
XDH | chr2 | 31604843 | 31604844 | rs45454494 | - | T | A/G | single | intron | 4 | 1000GENOMES,BUSHMAN,EGP_SNPS,ILLUMINA, | 2 | 0.988176 |
XDH | chr2 | 31604867 | 31604868 | rs138620193 | + | C | C/T | single | intron | 3 | 1000GENOMES,ILLUMINA,SSMP, | 2 | 0.988522 |
XDH | chr2 | 31605189 | 31605190 | rs45457594 | - | A | C/T | single | intron | 4 | 1000GENOMES,EGP_SNPS,GMI,SSMP, | 2 | 0.017827 |
XDH | chr2 | 31605281 | 31605282 | rs116648715 | + | G | G/T | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA,SSMP, | 2 | 0.986510 |
XDH | chr2 | 31605410 | 31605411 | rs6720163 | + | T | G/T | single | intron | 16 | 1000GENOMES,BCM-HGSC-SUB,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF, | 3 | 0.480112 |
XDH | chr2 | 31605446 | 31605447 | rs3769618 | - | C | A/G | single | intron | 17 | 1000GENOMES,ABI,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SNP500CANCER,SSMP,TISHKOFF,YUSUKE, | 3 | 0.341056 |
XDH | chr2 | 31605519 | 31605520 | rs45622534 | - | C | C/G | single | intron | 3 | 1000GENOMES,EGP_SNPS,GMI, | 2 | 0.014818 |
XDH | chr2 | 31605525 | 31605526 | rs45539541 | - | G | C/G/T | single | intron | 2 | EGP_SNPS,GMI, | 2 | 0.983696 |
XDH | chr2 | 31605525 | 31605525 | rs45483497 | - | - | -/T | insertion | intron | 4 | 1000GENOMES,EGP_SNPS,GMI,LUNTER, | 2 | 0.985182 |
XDH | chr2 | 31605614 | 31605615 | rs1864280 | + | A | A/G | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.507007 |
XDH | chr2 | 31606360 | 31606361 | rs45568731 | - | G | C/T | single | intron | 3 | 1000GENOMES,EGP_SNPS,SSMP, | 2 | 0.988992 |
XDH | chr2 | 31606381 | 31606382 | rs45509900 | - | A | A/T | single | intron | 2 | 1000GENOMES,EGP_SNPS, | 2 | 0.016074 |
XDH | chr2 | 31606382 | 31606383 | rs45597733 | - | G | C/T | single | intron | 2 | 1000GENOMES,EGP_SNPS, | 2 | 0.983926 |
XDH | chr2 | 31606383 | 31606384 | rs45464398 | - | C | A/G | single | intron | 2 | 1000GENOMES,EGP_SNPS, | 2 | 0.016074 |
XDH | chr2 | 31606424 | 31606425 | rs45462793 | - | C | A/G | single | intron | 4 | 1000GENOMES,EGP_SNPS,ILLUMINA-UK,TISHKOFF, | 2 | 0.021978 |
XDH | chr2 | 31606669 | 31606670 | rs4407290 | + | G | A/G | single | coding-synon | 16 | 1000GENOMES,AFFY,BCM-HGSC-SUB,CLINSEQ_SNP,DEVINE_LAB,EGP_SNPS,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,PHARMGKB_AB_DME,SC_JCM,SEATTLESEQ,SNP500CANCER,SSMP,TISHKOFF, | 2 | 0.034553 |
XDH | chr2 | 31606905 | 31606906 | rs45470100 | - | T | A/C/G | single | intron | 4 | 1000GENOMES,EGP_SNPS,ILLUMINA-UK,TISHKOFF, | 3 | 0.982523 |
XDH | chr2 | 31606985 | 31606986 | rs368094943 | - | G | (CA)23/24/25/26 | microsatellite | unknown | 1 | GENETHON, | 7 | 0.019000 |
XDH | chr2 | 31607064 | 31607065 | rs71444496 | + | C | C/T | single | intron | 5 | 1000GENOMES,ENSEMBL,GMI,HUMANGENOME_JCVI,SSMP, | 2 | 0.971586 |
XDH | chr2 | 31607127 | 31607128 | rs2236168 | + | T | C/T | single | intron | 21 | 1000GENOMES,ABI,AFFY,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,DEVINE_LAB,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.439741 |
XDH | chr2 | 31607544 | 31607545 | rs528551 | + | C | C/G | single | intron | 12 | 1000GENOMES,ABI,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,KWOK,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.938958 |
XDH | chr2 | 31607917 | 31607918 | rs45498201 | - | G | C/T | single | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,EGP_SNPS,ILLUMINA, | 2 | 0.988115 |
XDH | chr2 | 31607930 | 31607931 | rs45530139 | - | A | C/T | single | intron | 2 | 1000GENOMES,EGP_SNPS, | 2 | 0.011045 |
XDH | chr2 | 31607934 | 31607935 | rs45482594 | - | T | A/G | single | intron | 2 | 1000GENOMES,EGP_SNPS, | 2 | 0.985556 |
XDH | chr2 | 31608065 | 31608065 | rs45548143 | - | - | -/T | insertion | intron | 3 | 1000GENOMES,EGP_SNPS,LUNTER, | 2 | 0.976655 |
XDH | chr2 | 31608434 | 31608435 | rs17011403 | + | C | C/T | single | intron | 5 | 1000GENOMES,EGP_SNPS,ILLUMINA,KRIBB_YJKIM,PERLEGEN, | 2 | 0.980530 |
XDH | chr2 | 31608664 | 31608665 | rs45585433 | - | C | A/G | single | intron | 4 | 1000GENOMES,BUSHMAN,EGP_SNPS,TISHKOFF, | 2 | 0.027848 |
XDH | chr2 | 31608854 | 31608855 | rs561525 | + | T | C/T | single | intron | 14 | 1000GENOMES,EGP_SNPS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.055269 |
XDH | chr2 | 31608942 | 31608943 | rs59740440 | + | T | C/T | single | intron | 2 | 1000GENOMES,HGSV, | 2 | 0.010017 |
XDH | chr2 | 31609044 | 31609045 | rs473935 | + | T | A/T | single | intron | 12 | 1000GENOMES,EGP_SNPS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SSMP,TISHKOFF, | 2 | 0.055805 |
XDH | chr2 | 31609447 | 31609448 | rs477626 | + | A | A/C | single | intron | 25 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,NHLBI-ESP,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.000000 |
XDH | chr2 | 31609748 | 31609749 | rs45527541 | - | C | G/T | single | intron | 2 | 1000GENOMES,EGP_SNPS, | 2 | 0.984991 |
XDH | chr2 | 31609836 | 31609837 | rs187096717 | + | G | G/T | single | intron | 1 | 1000GENOMES, | 2 | 0.982094 |
XDH | chr2 | 31609941 | 31609942 | rs77775907 | + | G | A/G | single | intron | 2 | 1000GENOMES,COMPLETE_GENOMICS, | 2 | 0.017431 |
XDH | chr2 | 31609960 | 31609961 | rs4952239 | + | A | A/T | single | intron | 15 | 1000GENOMES,AFFY,BCMHGSC_JDW,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,KRIBB_YJKIM,PJP,SSMP,WI_SSAHASNP, | 2 | 0.364946 |
XDH | chr2 | 31609992 | 31609993 | rs185925 | - | G | C/T | single | intron | 19 | 1000GENOMES,AFFY,BCMHGSC_JDW,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SSMP,WI_SSAHASNP, | 2 | 0.370040 |
XDH | chr2 | 31610290 | 31610291 | rs113923480 | + | G | G/T | single | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA, | 2 | 0.983486 |
XDH | chr2 | 31610310 | 31610311 | rs206846 | - | C | C/G | single | intron | 23 | 1000GENOMES,AFFY,BCMHGSC_JDW,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP,YUSUKE, | 2 | 0.611590 |
XDH | chr2 | 31610700 | 31610701 | rs45575032 | - | C | A/G | single | coding-synon | 9 | 1000GENOMES,BUSHMAN,CLINSEQ_SNP,EGP_SNPS,ILLUMINA,NHLBI-ESP,SEATTLESEQ,SSMP,TISHKOFF, | 2 | 0.028115 |
XDH | chr2 | 31611028 | 31611029 | rs2073316 | + | G | A/G | single | intron | 18 | 1000GENOMES,ABI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGBASE,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,NHLBI-ESP,PJP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.374655 |
XDH | chr2 | 31611142 | 31611143 | rs45523133 | - | C | A/G | single | missense | 10 | 1000GENOMES,BUSHMAN,CLINSEQ_SNP,EGP_SNPS,EXOME_CHIP,ILLUMINA,NHLBI-ESP,SEATTLESEQ,SSMP,TISHKOFF, | 2 | 0.028118 |
XDH | chr2 | 31611212 | 31611213 | rs45501994 | - | G | C/T | single | intron | 6 | 1000GENOMES,BUSHMAN,EGP_SNPS,ILLUMINA,NHLBI-ESP,TISHKOFF, | 2 | 0.969582 |
XDH | chr2 | 31611366 | 31611367 | rs206847 | + | T | C/T | single | intron | 28 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGBASE,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SNP500CANCER,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP,YUSUKE, | 5 | 0.008249 |
XDH | chr2 | 31611739 | 31611740 | rs45591032 | - | C | A/G | single | intron | 5 | 1000GENOMES,BUSHMAN,EGP_SNPS,ILLUMINA,TISHKOFF, | 2 | 0.030431 |
XDH | chr2 | 31612068 | 31612069 | rs75529829 | + | C | C/T | single | intron | 2 | 1000GENOMES,BUSHMAN, | 2 | 0.986232 |
XDH | chr2 | 31612718 | 31612719 | rs206848 | - | A | C/T | single | intron | 12 | 1000GENOMES,ABI,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,ILLUMINA-UK,KWOK,PJP,SC_JCM, | 2 | 0.512797 |
XDH | chr2 | 31612780 | 31612781 | rs13418515 | + | C | C/T | single | intron | 11 | 1000GENOMES,AFFY,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SNP500CANCER,SSMP,WUGSC_SSAHASNP, | 2 | 0.888066 |
XDH | chr2 | 31613248 | 31613249 | rs206849 | - | A | C/T | single | intron | 22 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SNP500CANCER,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.622574 |
XDH | chr2 | 31613355 | 31613356 | rs45551735 | - | T | A/G | single | intron | 4 | 1000GENOMES,EGP_SNPS,GMI,SSMP, | 2 | 0.963652 |
XDH | chr2 | 31613944 | 31613945 | rs206850 | + | A | A/G | single | intron | 8 | 1000GENOMES,EGP_SNPS,GMI,ILLUMINA-UK,KWOK,SC_JCM,SSMP,TISHKOFF, | 2 | 0.947615 |
XDH | chr2 | 31614081 | 31614082 | rs206851 | + | A | A/G | single | intron | 19 | 1000GENOMES,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.280992 |
XDH | chr2 | 31614111 | 31614112 | rs45564434 | - | C | A/G | single | intron | 4 | 1000GENOMES,BUSHMAN,EGP_SNPS,TISHKOFF, | 2 | 0.025085 |
XDH | chr2 | 31614224 | 31614225 | rs13431382 | + | A | A/G | single | intron | 11 | 1000GENOMES,BCMHGSC_JDW,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,ILLUMINA,KRIBB_YJKIM,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.922380 |
XDH | chr2 | 31614899 | 31614900 | rs11904439 | + | A | A/G | single | intron | 9 | 1000GENOMES,ABI,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,KRIBB_YJKIM,SNP500CANCER,SSMP, | 2 | 0.972577 |
XDH | chr2 | 31615060 | 31615061 | rs202146117 | + | C | -/C/T | in-del | intron | 2 | 1000GENOMES,ABI, | 2 | 0.031221 |
XDH | chr2 | 31615175 | 31615176 | rs11895133 | + | C | C/G | single | intron | 8 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,CSHL-HAPMAP,ENSEMBL,GMI,PJP, | 2 | 0.807604 |
XDH | chr2 | 31616199 | 31616200 | rs113227183 | + | G | C/G | single | intron | 3 | 1000GENOMES,BCM-HGSC-SUB,SSMP, | 2 | 0.030461 |
XDH | chr2 | 31616311 | 31616312 | rs75840614 | + | C | C/T | single | intron | 4 | 1000GENOMES,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.932965 |
XDH | chr2 | 31616465 | 31616466 | rs7578359 | + | G | C/G | single | intron | 3 | 1000GENOMES,BUSHMAN,WI_SSAHASNP, | 2 | 0.014615 |
XDH | chr2 | 31616748 | 31616749 | rs206854 | - | A | C/T | single | intron | 21 | 1000GENOMES,ABI,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SC_SNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.648498 |
XDH | chr2 | 31616797 | 31616798 | rs112326377 | + | T | C/T | single | intron | 4 | 1000GENOMES,BUSHMAN,SSMP,TISHKOFF, | 2 | 0.043598 |
XDH | chr2 | 31617142 | 31617143 | rs206855 | - | A | A/T | single | intron | 19 | 1000GENOMES,ABI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SNP500CANCER,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.462077 |
XDH | chr2 | 31617267 | 31617268 | rs78656026 | + | T | G/T | single | intron | 1 | 1000GENOMES, | 2 | 0.020035 |
XDH | chr2 | 31617419 | 31617420 | rs206856 | - | T | A/T | single | intron | 13 | 1000GENOMES,ABI,AFFY,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,KRIBB_YJKIM,KWOK,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.931323 |
XDH | chr2 | 31617771 | 31617772 | rs72790646 | + | C | C/T | single | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.982110 |
XDH | chr2 | 31618001 | 31618002 | rs7582523 | + | C | C/G | single | intron | 7 | 1000GENOMES,AFFY,BUSHMAN,KRIBB_YJKIM,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.930016 |
XDH | chr2 | 31618026 | 31618027 | rs116215782 | + | T | C/T | single | intron | 3 | 1000GENOMES,BL,ILLUMINA, | 2 | 0.018277 |
XDH | chr2 | 31618143 | 31618144 | rs10199855 | + | C | C/T | single | intron | 8 | 1000GENOMES,COMPLETE_GENOMICS,GMI,ILLUMINA,SC_SNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.913144 |
XDH | chr2 | 31618522 | 31618523 | rs78456981 | + | T | C/T | single | intron | 4 | 1000GENOMES,BUSHMAN,SSMP,TISHKOFF, | 2 | 0.067859 |
XDH | chr2 | 31618889 | 31618890 | rs72790647 | + | G | A/G | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.011749 |
XDH | chr2 | 31618964 | 31618965 | rs76137637 | + | C | C/T | single | intron | 2 | 1000GENOMES,BUSHMAN, | 2 | 0.986239 |
XDH | chr2 | 31619100 | 31619101 | rs206857 | - | G | C/T | single | intron | 21 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 2 | 0.833680 |
XDH | chr2 | 31619266 | 31619267 | rs206858 | - | G | C/G | single | intron | 21 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SNP500CANCER,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.421862 |
XDH | chr2 | 31619429 | 31619430 | rs11885410 | + | T | C/T | single | intron | 7 | 1000GENOMES,ABI,CSHL-HAPMAP,ENSEMBL,ILLUMINA,KRIBB_YJKIM,TISHKOFF, | 2 | 0.032622 |
XDH | chr2 | 31619462 | 31619463 | rs75715410 | + | G | A/G | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.012620 |
XDH | chr2 | 31619558 | 31619559 | rs206859 | - | A | C/T | single | intron | 20 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.561032 |
XDH | chr2 | 31620096 | 31620097 | rs117082837 | + | C | A/C | single | intron | 3 | 1000GENOMES,SSMP,TISHKOFF, | 2 | 0.041340 |
XDH | chr2 | 31620297 | 31620298 | rs112666152 | + | C | C/T | single | intron | 3 | 1000GENOMES,BUSHMAN,ILLUMINA, | 2 | 0.985780 |
XDH | chr2 | 31621597 | 31621598 | rs10175754 | + | T | C/T | single | intron | 14 | 1000GENOMES,BCMHGSC_JDW,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.121671 |
XDH | chr2 | 31622424 | 31622425 | rs45476593 | - | T | A/G | single | intron | 5 | 1000GENOMES,COMPLETE_GENOMICS,EGP_SNPS,ILLUMINA,TISHKOFF, | 2 | 0.971674 |
XDH | chr2 | 31622464 | 31622465 | rs2010704 | - | C | G/T | single | intron | 11 | 1000GENOMES,ABI,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,GMI,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.542612 |
XDH | chr2 | 31622803 | 31622804 | rs206860 | - | G | C/T | single | intron | 25 | 1000GENOMES,ABI,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SNP500CANCER,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 3 | 0.292299 |
XDH | chr2 | 31623236 | 31623237 | rs2749994 | + | T | C/T | single | intron | 17 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_JCM,SSMP,TISHKOFF,WUGSC_SSAHASNP,YUSUKE, | 2 | 0.702335 |
XDH | chr2 | 31623809 | 31623810 | rs6714794 | + | T | C/T | single | intron | 9 | 1000GENOMES,BCM_SSAHASNP,BUSHMAN,EGP_SNPS,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.075039 |
XDH | chr2 | 31624565 | 31624566 | rs112657838 | + | G | A/G | single | intron | 2 | 1000GENOMES,BUSHMAN, | 2 | 0.011927 |
XDH | chr2 | 31624835 | 31624836 | rs494852 | - | C | A/G | single | intron | 21 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SNP500CANCER,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.197805 |
XDH | chr2 | 31624986 | 31624988 | rs35575779 | + | AG | -/AG | deletion | intron | 10 | 1000GENOMES,ABI,DEVINE_LAB,EGP_SNPS,GMI,HUMANGENOME_JCVI,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 0.055415 |
XDH | chr2 | 31625609 | 31625610 | rs513311 | - | G | A/C | single | intron | 15 | 1000GENOMES,ABI,EGP_SNPS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.071771 |
XDH | chr2 | 31626044 | 31626045 | rs1346644 | - | G | C/G | single | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,SI_EXO,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.889847 |
XDH | chr2 | 31626093 | 31626094 | rs206797 | - | C | G/T | single | intron | 14 | 1000GENOMES,ABI,EGP_SNPS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,KWOK,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 2 | 0.943922 |
XDH | chr2 | 31626384 | 31626385 | rs1429372 | - | A | C/T | single | intron | 18 | 1000GENOMES,ABI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGBASE,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,SNP500CANCER,SSMP,TISHKOFF,TSC-CSHL,YUSUKE, | 2 | 0.433107 |
XDH | chr2 | 31626635 | 31626636 | rs206798 | - | C | A/G | single | intron | 19 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.210345 |
XDH | chr2 | 31626947 | 31626948 | rs11302270 | + | A | -/A | deletion | intron | 11 | 1000GENOMES,BILGI_BIOE,BUSHMAN,DEVINE_LAB,EGP_SNPS,GMI,HUMANGENOME_JCVI,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 0.151042 |
XDH | chr2 | 31627105 | 31627106 | rs206799 | - | G | C/G | single | intron | 13 | 1000GENOMES,ABI,EGP_SNPS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.940143 |
XDH | chr2 | 31627946 | 31627947 | rs206800 | - | A | C/T | single | intron | 20 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KWOK,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.210658 |
XDH | chr2 | 31628248 | 31628249 | rs11323608 | + | A | -/A | deletion | intron | 4 | 1000GENOMES,DEVINE_LAB,EGP_SNPS,LUNTER, | 2 | 0.014431 |
XDH | chr2 | 31628704 | 31628705 | rs1366814 | - | T | A/C | single | intron | 15 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.917917 |
XDH | chr2 | 31628745 | 31628746 | rs206801 | - | G | C/T | single | intron | 15 | 1000GENOMES,CLINSEQ_SNP,EGP_SNPS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KWOK,NHLBI-ESP,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 2 | 0.935686 |
XDH | chr2 | 31628954 | 31628955 | rs206802 | - | C | C/G | single | intron | 19 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.143054 |
XDH | chr2 | 31629029 | 31629030 | rs206803 | - | A | G/T | single | intron | 18 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SSMP,TISHKOFF, | 2 | 0.150255 |
XDH | chr2 | 31629511 | 31629512 | rs6759319 | + | C | C/T | single | intron | 11 | 1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,ILLUMINA,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.924210 |
XDH | chr2 | 31630381 | 31630382 | rs3769616 | - | C | A/G | single | intron | 7 | 1000GENOMES,AFFY,CSHL-HAPMAP,ILLUMINA,KRIBB_YJKIM,SSMP,YUSUKE, | 2 | 0.044337 |
XDH | chr2 | 31630845 | 31630846 | rs206804 | - | C | A/G | single | intron | 21 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SNP500CANCER,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.202232 |
XDH | chr2 | 31630866 | 31630867 | rs206805 | - | C | A/G | single | intron | 23 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SNP500CANCER,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.199901 |
XDH | chr2 | 31632702 | 31632703 | rs116760403 | + | C | A/C | single | intron | 1 | 1000GENOMES, | 2 | 0.014795 |
XDH | chr2 | 31632955 | 31632956 | rs1978639 | - | C | G/T | single | intron | 11 | 1000GENOMES,ABI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA-UK,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.541602 |
XDH | chr2 | 31633013 | 31633014 | rs1978638 | - | T | A/C | single | intron | 11 | 1000GENOMES,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA-UK,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.480488 |
XDH | chr2 | 31633437 | 31633438 | rs61706447 | + | C | C/T | single | intron | 8 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.540503 |
XDH | chr2 | 31633964 | 31633965 | rs206806 | - | T | A/G | single | intron | 16 | 1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.420237 |
XDH | chr2 | 31634011 | 31634012 | rs112810470 | + | G | A/G | single | intron | 6 | 1000GENOMES,BL,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF, | 2 | 0.270183 |
XDH | chr2 | 31634075 | 31634076 | rs206807 | - | C | G/T | single | intron | 9 | 1000GENOMES,ENSEMBL,GMI,HGSV,KWOK,PJP,SC_JCM,SSMP,TISHKOFF, | 2 | 0.939908 |
XDH | chr2 | 31634129 | 31634130 | rs206808 | - | C | C/G | single | intron | 10 | 1000GENOMES,ABI,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,KWOK,SC_JCM,SSMP,WI_SSAHASNP, | 2 | 0.504125 |
XDH | chr2 | 31634138 | 31634139 | rs206809 | - | C | A/G | single | intron | 6 | 1000GENOMES,ENSEMBL,HGSV,KWOK,SC_JCM,SSMP, | 2 | 0.050459 |
XDH | chr2 | 31634823 | 31634823 | rs45455193 | - | - | -/CACT | insertion | intron | 5 | 1000GENOMES,BILGI_BIOE,BUSHMAN,EGP_SNPS,LUNTER, | 2 | 0.521277 |
XDH | chr2 | 31634861 | 31634862 | rs45555736 | - | T | A/T | single | intron | 3 | 1000GENOMES,EGP_SNPS,GMI, | 2 | 0.962352 |
XDH | chr2 | 31635317 | 31635318 | rs200181293 | + | A | -/A | deletion | intron | 4 | 1000GENOMES,LUNTER,SSMP,TISHKOFF, | 2 | 0.063820 |
XDH | chr2 | 31636216 | 31636217 | rs206810 | - | T | A/G | single | intron | 16 | 1000GENOMES,ABI,EGP_SNPS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.934866 |
XDH | chr2 | 31636864 | 31636865 | rs45503200 | - | C | A/G | single | intron | 2 | 1000GENOMES,EGP_SNPS, | 2 | 0.014780 |
XDH | chr2 | 31636914 | 31636915 | rs206811 | - | A | C/T | single | intron | 20 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SNP500CANCER,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.600252 |
XDH | chr2 | 31637252 | 31637253 | rs45451795 | - | G | C/T | single | intron | 5 | 1000GENOMES,BCM-HGSC-SUB,EGP_SNPS,ILLUMINA,SSMP, | 2 | 0.970439 |
XDH | chr2 | 31637597 | 31637598 | rs36208390 | + | C | C/G | single | untranslated-5 | 7 | 1000GENOMES,EGP_SNPS,ILLUMINA,NHLBI-ESP,PHARMGKB_AB_DME,SNP500CANCER,STEJUSTINE-REGGEN, | 2 | 0.987727 |