Folate SNPs in CpG Data

Gene Symbol	Chromosome	CpG Start	CpG End	CpG Count	SNP Start	SNP End	rsID	Strand	ref NCBI	Observed	C+G Count	CpG%	GC%	Observed-Expected Ratio	Function
ALDH1L1	chr3	125898662	125899568	CpG:73	125899177	125899178	rs41266453	+	G	A/G	589	16.1	65	0.76	intron,ncRN
ALDH1L1	chr3	125898662	125899568	CpG:73	125899306	125899307	rs377209389	+	C	C/T	589	16.1	65	0.76	intron,ncRN
ALDH1L1	chr3	125898662	125899568	CpG:73	125899508	125899509	rs148891899	+	G	-/G	589	16.1	65	0.76	intron,ncRN
ALDH1L1	chr3	125898662	125899568	CpG:73	125899508	125899509	rs182989946	+	G	C/G	589	16.1	65	0.76	intron,ncRN
ATIC	chr2	216176549	216177132	CpG:62	216176774	216176775	rs13029548	+	C	C/T	429	21.3	73.6	0.79	untranslate
ATIC	chr2	216176549	216177132	CpG:62	216176779	216176780	rs28366034	+	C	C/T	429	21.3	73.6	0.79	untranslate
ATIC	chr2	216176549	216177132	CpG:62	216176790	216176791	rs117281478	+	C	C/T	429	21.3	73.6	0.79	untranslate
ATIC	chr2	216176549	216177132	CpG:62	216176804	216176805	rs370025109	+	C	C/T	429	21.3	73.6	0.79	untranslate
ATIC	chr2	216176549	216177132	CpG:62	216176806	216176807	rs4535042	+	T	G/T	429	21.3	73.6	0.79	untranslate
ATIC	chr2	216176549	216177132	CpG:62	216176823	216176824	rs28366035	+	C	C/G/T	429	21.3	73.6	0.79	untranslate
ATIC	chr2	216176549	216177132	CpG:62	216176842	216176843	rs11550205	+	C	C/T	429	21.3	73.6	0.79	untranslate
ATIC	chr2	216176549	216177132	CpG:62	216176850	216176851	rs11550203	+	C	C/T	429	21.3	73.6	0.79	untranslate
ATIC	chr2	216176549	216177132	CpG:62	216176869	216176870	rs138988481	+	C	C/T	429	21.3	73.6	0.79	missense
ATIC	chr2	216176549	216177132	CpG:62	216176873	216176874	rs11550204	+	C	C/G	429	21.3	73.6	0.79	coding-syno
ATIC	chr2	216176549	216177132	CpG:62	216176909	216176910	rs368820754	+	T	A/T	429	21.3	73.6	0.79	intron
ATIC	chr2	216176549	216177132	CpG:62	216176959	216176960	rs113290372	+	C	C/T	429	21.3	73.6	0.79	intron
ATIC	chr2	216176549	216177132	CpG:62	216176977	216176978	rs190514165	+	G	A/G	429	21.3	73.6	0.79	intron
ATIC	chr2	216176549	216177132	CpG:62	216176990	216176991	rs370672880	+	G	A/G	429	21.3	73.6	0.79	intron
ATIC	chr2	216176549	216177132	CpG:62	216177069	216177070	rs113493543	+	A	A/G	429	21.3	73.6	0.79	intron
CBS	chr21	44473839	44474083	CpG:20	44473858	44473860	rs371480441	+	TG	-/TG	157	16.4	64.3	0.79	intron,untr
CBS	chr21	44473839	44474083	CpG:20	44473866	44473867	rs1051319	-	G	C/G	157	16.4	64.3	0.79	intron,untr
CBS	chr21	44473839	44474083	CpG:20	44473882	44473887	rs71872941	+	GCCAG	-/GCCAG	157	16.4	64.3	0.79	intron,untr
CBS	chr21	44473839	44474083	CpG:20	44473884	44473889	rs375037300	+	CAGGC	-/CAGGC	157	16.4	64.3	0.79	intron,untr
CBS	chr21	44473839	44474083	CpG:20	44473908	44473909	rs115406358	+	C	C/T	157	16.4	64.3	0.79	intron,untr
CBS	chr21	44473839	44474083	CpG:20	44473909	44473910	rs141447394	+	G	A/G	157	16.4	64.3	0.79	intron,untr
CBS	chr21	44473839	44474083	CpG:20	44473932	44473933	rs375308003	+	G	A/G	157	16.4	64.3	0.79	intron,untr
CBS	chr21	44473839	44474083	CpG:20	44473955	44473956	rs374464201	+	C	C/T	157	16.4	64.3	0.79	intron,untr
CBS	chr21	44473839	44474083	CpG:20	44473961	44473962	rs367597108	+	C	C/T	157	16.4	64.3	0.79	intron,untr
CBS	chr21	44473839	44474083	CpG:20	44473962	44473963	rs55646248	+	G	A/G	157	16.4	64.3	0.79	intron,untr
CBS	chr21	44473839	44474083	CpG:20	44473967	44473968	rs1051316	-	G	C/T	157	16.4	64.3	0.79	intron,untr
CBS	chr21	44473839	44474083	CpG:20	44473971	44473972	rs200259659	+	C	C/T	157	16.4	64.3	0.79	untranslate
CBS	chr21	44473839	44474083	CpG:20	44473972	44473973	rs368510850	+	G	A/G	157	16.4	64.3	0.79	untranslate
CBS	chr21	44473839	44474083	CpG:20	44473979	44473980	rs9978104	+	G	G/T	157	16.4	64.3	0.79	untranslate
CBS	chr21	44473839	44474083	CpG:20	44474001	44474002	rs143945898	+	C	C/G	157	16.4	64.3	0.79	coding-syno
CBS	chr21	44473839	44474083	CpG:20	44474002	44474003	rs150828989	+	C	C/T	157	16.4	64.3	0.79	missense
CBS	chr21	44473839	44474083	CpG:20	44474012	44474013	rs139651937	+	C	A/C	157	16.4	64.3	0.79	missense
CBS	chr21	44473839	44474083	CpG:20	44474029	44474030	rs121964968	-	A	C/T	157	16.4	64.3	0.79	missense
CBS	chr21	44473839	44474083	CpG:20	44474049	44474050	rs200743155	+	C	C/T	157	16.4	64.3	0.79	coding-syno
CBS	chr21	44473839	44474083	CpG:20	44474070	44474071	rs150037641	+	A	A/G	157	16.4	64.3	0.79	coding-syno
CBS	chr21	44473839	44474083	CpG:20	44474081	44474082	rs201916339	+	C	C/T	157	16.4	64.3	0.79	missense
CBS	chr21	44477654	44478065	CpG:29	44477664	44477665	rs111980951	+	G	A/G	260	14.1	63.3	0.71	intron
CBS	chr21	44477654	44478065	CpG:29	44477725	44477756	rs72210077	+	ACCTGTTTGAG	lengthTooLo	260	14.1	63.3	0.71	intron
CBS	chr21	44477654	44478065	CpG:29	44477735	44477736	rs13052765	+	G	A/G	260	14.1	63.3	0.71	intron
CBS	chr21	44477654	44478065	CpG:29	44477737	44477738	rs13046443	+	C	C/T	260	14.1	63.3	0.71	intron
CBS	chr21	44477654	44478065	CpG:29	44477738	44477739	rs147231912	+	G	C/G	260	14.1	63.3	0.71	intron
CBS	chr21	44477654	44478065	CpG:29	44477751	44477752	rs13049958	+	T	C/T	260	14.1	63.3	0.71	intron
CBS	chr21	44477654	44478065	CpG:29	44477766	44477767	rs13046893	+	A	A/G	260	14.1	63.3	0.71	intron
CBS	chr21	44477654	44478065	CpG:29	44477771	44477772	rs13052774	+	G	A/C/G	260	14.1	63.3	0.71	intron
CBS	chr21	44477654	44478065	CpG:29	44477777	44477778	rs13052870	+	G	C/G	260	14.1	63.3	0.71	intron
CBS	chr21	44477654	44478065	CpG:29	44477784	44477785	rs13046552	+	C	C/G	260	14.1	63.3	0.71	intron
CBS	chr21	44477654	44478065	CpG:29	44477785	44477786	rs113664997	+	G	C/G	260	14.1	63.3	0.71	intron
CBS	chr21	44477654	44478065	CpG:29	44477802	44477803	rs13046562	+	C	C/G	260	14.1	63.3	0.71	intron
CBS	chr21	44477654	44478065	CpG:29	44477833	44477834	rs34718891	+	C	C/G	260	14.1	63.3	0.71	intron
CBS	chr21	44477654	44478065	CpG:29	44477839	44477840	rs34726873	+	G	C/G	260	14.1	63.3	0.71	intron
CBS	chr21	44477654	44478065	CpG:29	44477846	44477847	rs75753110	+	C	C/G	260	14.1	63.3	0.71	intron
CBS	chr21	44477654	44478065	CpG:29	44477852	44477853	rs111349116	+	T	C/T	260	14.1	63.3	0.71	intron
CBS	chr21	44477654	44478065	CpG:29	44477875	44477876	rs13050197	+	T	C/T	260	14.1	63.3	0.71	intron
CBS	chr21	44477654	44478065	CpG:29	44477875	44477877	rs72066709	+	TG	(LARGEDELET	260	14.1	63.3	0.71	unknown
CBS	chr21	44477654	44478065	CpG:29	44477877	44477878	rs75101994	+	G	C/G	260	14.1	63.3	0.71	intron
CBS	chr21	44477654	44478065	CpG:29	44477883	44477884	rs76160396	+	C	C/T	260	14.1	63.3	0.71	intron
CBS	chr21	44477654	44478065	CpG:29	44477884	44477885	rs111719480	+	G	G/T	260	14.1	63.3	0.71	intron
CBS	chr21	44477654	44478065	CpG:29	44477908	44477909	rs74451638	+	C	C/G	260	14.1	63.3	0.71	intron
CBS	chr21	44477654	44478065	CpG:29	44477914	44477915	rs113433170	+	C	C/T	260	14.1	63.3	0.71	intron
CBS	chr21	44477654	44478065	CpG:29	44477915	44477916	rs78383780	+	G	G/T	260	14.1	63.3	0.71	intron
CBS	chr21	44477654	44478065	CpG:29	44477937	44477938	rs375968402	+	C	C/T	260	14.1	63.3	0.71	intron
CBS	chr21	44477654	44478065	CpG:29	44477939	44477940	rs35338183	+	G	C/G	260	14.1	63.3	0.71	intron
CBS	chr21	44477654	44478065	CpG:29	44477946	44477947	rs113744932	+	G	G/T	260	14.1	63.3	0.71	intron
CBS	chr21	44477654	44478065	CpG:29	44477970	44477971	rs111436479	+	G	C/G	260	14.1	63.3	0.71	intron
CBS	chr21	44477654	44478065	CpG:29	44477977	44477978	rs111822158	+	G	G/T	260	14.1	63.3	0.71	intron
CBS	chr21	44477654	44478065	CpG:29	44477999	44478000	rs234703	+	T	C/T	260	14.1	63.3	0.71	intron
CBS	chr21	44477654	44478065	CpG:29	44478008	44478009	rs111811239	+	G	G/T	260	14.1	63.3	0.71	intron
CBS	chr21	44477654	44478065	CpG:29	44478032	44478033	rs34296490	+	C	C/G/T	260	14.1	63.3	0.71	intron
CBS	chr21	44477654	44478065	CpG:29	44478038	44478039	rs369145125	+	C	C/T	260	14.1	63.3	0.71	intron
CBS	chr21	44477654	44478065	CpG:29	44478040	44478041	rs34058998	+	C	C/T	260	14.1	63.3	0.71	intron
CBS	chr21	44477654	44478065	CpG:29	44478046	44478047	rs73906415	+	C	C/G	260	14.1	63.3	0.71	intron
CBS	chr21	44477654	44478065	CpG:29	44478056	44478057	rs35158583	+	C	C/G	260	14.1	63.3	0.71	intron
CBS	chr21	44477654	44478065	CpG:29	44478063	44478064	rs111622470	+	C	C/T	260	14.1	63.3	0.71	intron
CBS	chr21	44480559	44480772	CpG:19	44480570	44480571	rs146180894	+	G	A/G	140	17.8	65.7	0.83	coding-syno
CBS	chr21	44480559	44480772	CpG:19	44480582	44480583	rs139145075	+	C	A/C	140	17.8	65.7	0.83	coding-syno
CBS	chr21	44480559	44480772	CpG:19	44480584	44480585	rs372010465	+	C	C/T	140	17.8	65.7	0.83	missense
CBS	chr21	44480559	44480772	CpG:19	44480589	44480590	rs11700812	+	C	C/G/T	140	17.8	65.7	0.83	missense
CBS	chr21	44480559	44480772	CpG:19	44480590	44480591	rs117687681	+	G	A/G	140	17.8	65.7	0.83	missense
CBS	chr21	44480559	44480772	CpG:19	44480613	44480614	rs370851632	+	G	A/G	140	17.8	65.7	0.83	missense
CBS	chr21	44480559	44480772	CpG:19	44480615	44480616	rs1801181	-	G	C/T	140	17.8	65.7	0.83	coding-syno
CBS	chr21	44480559	44480772	CpG:19	44480623	44480624	rs148589243	+	C	C/T	140	17.8	65.7	0.83	missense
CBS	chr21	44480559	44480772	CpG:19	44480624	44480625	rs368206976	+	G	C/G	140	17.8	65.7	0.83	coding-syno
CBS	chr21	44480559	44480772	CpG:19	44480628	44480629	rs370163789	+	A	A/G	140	17.8	65.7	0.83	missense
CBS	chr21	44480559	44480772	CpG:19	44480636	44480637	rs61735859	+	C	C/T	140	17.8	65.7	0.83	coding-syno
CBS	chr21	44480559	44480772	CpG:19	44480637	44480638	rs121964972	-	G	C/T	140	17.8	65.7	0.83	missense
CBS	chr21	44480559	44480772	CpG:19	44480688	44480689	rs372074099	+	G	A/G	140	17.8	65.7	0.83	intron
CBS	chr21	44480559	44480772	CpG:19	44480698	44480699	rs376602117	+	C	C/T	140	17.8	65.7	0.83	intron
CBS	chr21	44480559	44480772	CpG:19	44480735	44480736	rs112893409	+	C	C/T	140	17.8	65.7	0.83	intron
CBS	chr21	44480559	44480772	CpG:19	44480770	44480771	rs187967192	+	C	C/G	140	17.8	65.7	0.83	intron
CBS	chr21	44480559	44480772	CpG:19	44480771	44480772	rs74677118	+	G	A/G	140	17.8	65.7	0.83	intron
CBS	chr21	44486140	44486465	CpG:28	44486155	44486156	rs144404003	+	G	-/G	227	17.2	69.8	0.71	intron
CBS	chr21	44486140	44486465	CpG:28	44486210	44486211	rs2298760	+	C	A/C/T	227	17.2	69.8	0.71	intron
CBS	chr21	44486140	44486465	CpG:28	44486211	44486212	rs2298761	+	G	A/G	227	17.2	69.8	0.71	intron
CBS	chr21	44486140	44486465	CpG:28	44486228	44486229	rs112120780	+	G	A/G	227	17.2	69.8	0.71	intron
CBS	chr21	44486140	44486465	CpG:28	44486244	44486245	rs373309035	+	G	A/G	227	17.2	69.8	0.71	intron
CBS	chr21	44486140	44486465	CpG:28	44486270	44486271	rs234707	+	G	G/T	227	17.2	69.8	0.71	intron
CBS	chr21	44486140	44486465	CpG:28	44486277	44486278	rs7279359	+	C	C/T	227	17.2	69.8	0.71	intron
CBS	chr21	44486140	44486465	CpG:28	44486310	44486311	rs147616151	+	G	G/T	227	17.2	69.8	0.71	intron
CBS	chr21	44486140	44486465	CpG:28	44486323	44486324	rs234708	+	T	C/T	227	17.2	69.8	0.71	intron
CBS	chr21	44486140	44486465	CpG:28	44486352	44486353	rs373782713	+	C	C/T	227	17.2	69.8	0.71	missense
CBS	chr21	44486140	44486465	CpG:28	44486362	44486363	rs367669819	+	G	A/G	227	17.2	69.8	0.71	coding-syno
CBS	chr21	44486140	44486465	CpG:28	44486368	44486369	rs148782895	+	C	C/T	227	17.2	69.8	0.71	coding-syno
CBS	chr21	44486140	44486465	CpG:28	44486369	44486370	rs121964963	-	G	C/T	227	17.2	69.8	0.71	missense
CBS	chr21	44486140	44486465	CpG:28	44486373	44486374	rs121964966	-	C	A/G	227	17.2	69.8	0.71	missense
CBS	chr21	44486140	44486465	CpG:28	44486374	44486375	rs370167302	+	G	A/G	227	17.2	69.8	0.71	coding-syno
CBS	chr21	44486140	44486465	CpG:28	44486388	44486389	rs121964965	-	C	A/G	227	17.2	69.8	0.71	missense
CBS	chr21	44486140	44486465	CpG:28	44486389	44486390	rs201860288	+	G	C/G	227	17.2	69.8	0.71	coding-syno
CBS	chr21	44486140	44486465	CpG:28	44486399	44486400	rs144832032	+	G	A/G	227	17.2	69.8	0.71	missense
CBS	chr21	44486140	44486465	CpG:28	44486403	44486404	rs147474549	+	C	C/T	227	17.2	69.8	0.71	missense
CBS	chr21	44486140	44486465	CpG:28	44486404	44486405	rs200362321	+	G	A/G	227	17.2	69.8	0.71	coding-syno
CBS	chr21	44486140	44486465	CpG:28	44486409	44486410	rs140002610	+	G	A/G	227	17.2	69.8	0.71	missense
CBS	chr21	44486140	44486465	CpG:28	44486419	44486420	rs374593242	+	C	C/T	227	17.2	69.8	0.71	coding-syno
CBS	chr21	44486140	44486465	CpG:28	44486422	44486423	rs199824647	+	A	A/T	227	17.2	69.8	0.71	coding-syno
CBS	chr21	44486140	44486465	CpG:28	44486458	44486459	rs374438247	+	G	A/G	227	17.2	69.8	0.71	coding-syno
CBS	chr21	44486140	44486465	CpG:28	44486461	44486462	rs145338910	+	C	C/T	227	17.2	69.8	0.71	coding-syno
CBS	chr21	44486140	44486465	CpG:28	44486462	44486463	rs121964964	-	G	C/T	227	17.2	69.8	0.71	missense
CBS	chr21	44486140	44486465	CpG:28	44486463	44486464	rs377708532	+	C	C/T	227	17.2	69.8	0.71	missense
CBS	chr21	44486140	44486465	CpG:28	44486464	44486465	rs140879135	+	G	A/G	227	17.2	69.8	0.71	coding-syno
CBS	chr21	44494624	44496989	CpG:232	44494715	44494716	rs34338239	+	C	-/C	1516	19.6	64.1	0.96	intron
CBS	chr21	44494624	44496989	CpG:232	44494722	44494723	rs375209193	+	G	G/T	1516	19.6	64.1	0.96	intron
CBS	chr21	44494624	44496989	CpG:232	44494773	44494774	rs369420669	+	G	A/G	1516	19.6	64.1	0.96	intron
CBS	chr21	44494624	44496989	CpG:232	44494868	44494869	rs182713804	+	A	A/C	1516	19.6	64.1	0.96	intron
CBS	chr21	44494624	44496989	CpG:232	44494922	44494923	rs56671882	+	G	G/T	1516	19.6	64.1	0.96	intron
CBS	chr21	44494624	44496989	CpG:232	44495008	44495009	rs375904808	+	G	A/G	1516	19.6	64.1	0.96	intron
CBS	chr21	44494624	44496989	CpG:232	44495074	44495075	rs370340542	+	G	A/G	1516	19.6	64.1	0.96	intron
CBS	chr21	44494624	44496989	CpG:232	44495247	44495248	rs2850142	+	C	C/G	1516	19.6	64.1	0.96	intron
CBS	chr21	44494624	44496989	CpG:232	44495391	44495392	rs114924493	+	C	C/T	1516	19.6	64.1	0.96	intron
CBS	chr21	44494624	44496989	CpG:232	44495475	44495476	rs57282300	+	A	A/G	1516	19.6	64.1	0.96	intron
CBS	chr21	44494624	44496989	CpG:232	44495504	44495505	rs186861178	+	G	A/G	1516	19.6	64.1	0.96	intron
CBS	chr21	44494624	44496989	CpG:232	44495579	44495580	rs57361542	+	C	C/T	1516	19.6	64.1	0.96	intron
CBS	chr21	44494624	44496989	CpG:232	44495653	44495654	rs34512829	+	G	-/G	1516	19.6	64.1	0.96	intron
CBS	chr21	44494624	44496989	CpG:232	44495716	44495717	rs34310920	+	C	-/C	1516	19.6	64.1	0.96	intron
CBS	chr21	44494624	44496989	CpG:232	44495729	44495730	rs35748451	+	C	-/C	1516	19.6	64.1	0.96	intron
CBS	chr21	44494624	44496989	CpG:232	44495731	44495732	rs34462715	+	G	C/G	1516	19.6	64.1	0.96	intron
CBS	chr21	44494624	44496989	CpG:232	44495764	44495765	rs111460177	+	C	A/C	1516	19.6	64.1	0.96	intron
CBS	chr21	44494624	44496989	CpG:232	44495771	44495772	rs111966370	+	C	C/G	1516	19.6	64.1	0.96	intron
CBS	chr21	44494624	44496989	CpG:232	44495801	44495802	rs191574093	+	C	C/G	1516	19.6	64.1	0.96	intron
CBS	chr21	44494624	44496989	CpG:232	44495954	44495955	rs112271970	+	G	A/G	1516	19.6	64.1	0.96	intron,untr
CBS	chr21	44494624	44496989	CpG:232	44496061	44496062	rs1788467	+	C	C/G	1516	19.6	64.1	0.96	intron,near
CBS	chr21	44494624	44496989	CpG:232	44496094	44496095	rs2850143	+	C	C/G	1516	19.6	64.1	0.96	intron,near
CBS	chr21	44494624	44496989	CpG:232	44496139	44496140	rs184089557	+	T	G/T	1516	19.6	64.1	0.96	intron,near
CBS	chr21	44494624	44496989	CpG:232	44496402	44496403	rs187311433	+	T	A/T	1516	19.6	64.1	0.96	near-gene-5
CD320	chr19	8372597	8373302	CpG:69	8372740	8372741	rs190788096	+	C	C/T	481	19.6	68.2	0.84	intron
CD320	chr19	8372597	8373302	CpG:69	8372743	8372744	rs180797395	+	C	C/T	481	19.6	68.2	0.84	intron
CD320	chr19	8372597	8373302	CpG:69	8372852	8372853	rs137914824	+	G	G/T	481	19.6	68.2	0.84	intron
CD320	chr19	8372597	8373302	CpG:69	8372868	8372869	rs114689706	+	G	A/G	481	19.6	68.2	0.84	intron

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