Folate SNP Data

Gene Symbol	Chromosome	Start	End	rs ID	Strand	NCBI ref	Observed	Function	Submitter Count	Submitter	Frequency Count	Allele Frequency
SLC25A32	chr 8	104423172	104423173	rs117849763	+	G	A/G	intron	2	1000GENOMES,ILLUMINA,	2	0.033507
SLC25A32	chr 8	104423010	104423011	rs118081385	+	G	A/G	intron	2	1000GENOMES,ILLUMINA,	2	0.01349
SLC25A32	chr 8	104411057	104411058	rs12546452	+	A	A/C	ncRNA,untransla	5	1000GENOMES,ABI,CSHL-HAPMAP,ENSEMBL,SSMP,	2	0.982585
SLC25A32	chr 8	104418294	104418295	rs13272915	+	A	A/G	intron	10	1000GENOMES,BCM-HGSC-SUB,BGI,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,	2	0.668801
SLC25A32	chr 8	104420108	104420109	rs138160805	+	T	C/T	intron	1	1000GENOMES,	2	0.032599
SLC25A32	chr 8	104421447	104421462	rs138664135	+	AT	-/ATA	intron	3	1000GENOMES,BILGI_BIOE,LUNTER,	2	0.168962
SLC25A32	chr 8	104419143	104419144	rs142337299	+	A	A/C	intron	1	1000GENOMES,	2	0.988522
SLC25A32	chr 8	104416020	104416021	rs147119462	+	T	C/T	intron	2	1000GENOMES,SSMP,	2	0.016529
SLC25A32	chr 8	104412150	104412151	rs148028640	+	A	A/T	ncRNA,untransla	2	1000GENOMES,ILLUMINA,	2	0.986685
SLC25A32	chr 8	104416251	104416252	rs17228841	+	T	C/T	intron	2	1000GENOMES,PERLEGEN,	2	0.03414
SLC25A32	chr 8	104417044	104417045	rs17803441	+	C	C/T	intron,ncRNA,mi	9	1000GENOMES,AFFY,APPLERA_GI,CLINSEQ_SNP,EXOME_CHIP,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,	2	0.952397
SLC25A32	chr 8	104416692	104416693	rs1865853	+	C	C/T	intron	18	1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENO	2	0.734396
SLC25A32	chr 8	104416784	104416785	rs1865854	+	C	C/T	intron	17	1000GENOMES,ABI,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,S	2	0.733607
SLC25A32	chr 8	104416832	104416833	rs1865855	+	A	A/C	intron	15	1000GENOMES,ABI,BCM-HGSC-SUB,BL,BUSHMAN,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PJP,S	2	0.690141
SLC25A32	chr 8	104420160	104420160	rs200282193	+	-	-/TA	intron	1	1000GENOMES,	2	0.988981
SLC25A32	chr 8	104417890	104417890	rs201957062	+	-	-/A	intron	1	1000GENOMES,	2	0.988981
SLC25A32	chr 8	104414437	104414438	rs2118058	+	G	A/G	intron	4	1000GENOMES,ABI,SC_JCM,TSC-CSHL,	2	0.012631
SLC25A32	chr 8	104412387	104412388	rs2241777	+	C	A/C	ncRNA,untransla	23	1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,CGAP-GAI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,	2	0.455525
SLC25A32	chr 8	104412934	104412935	rs2241778	+	C	C/T	intron	22	1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENO	2	0.551762
SLC25A32	chr 8	104426530	104426531	rs28630640	+	C	C/T	intron,near-gen	10	1000GENOMES,ABI,BL,ENSEMBL,HUMANGENOME_JCVI,ILLUMINA,PJP,SSAHASNP,SSMP,TISHKOFF,	2	0.943681
SLC25A32	chr 8	104425303	104425304	rs3098241	-	A	C/T	intron,near-gen	18	1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMIN	2	0.216899
SLC25A32	chr 8	104424390	104424391	rs3098242	-	G	C/T	intron	18	1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLU	2	0.549943
SLC25A32	chr 8	104422570	104422571	rs3098243	-	A	C/T	intron	17	1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JC	2	0.449408
SLC25A32	chr 8	104421327	104421328	rs3098244	-	G	C/T	intron	16	1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLU	2	0.764751
SLC25A32	chr 8	104420291	104420292	rs3098245	-	G	C/T	intron	9	1000GENOMES,ABI,BCM-HGSC-SUB,ENSEMBL,HGSV,HUMANGENOME_JCVI,PJP,SC_JCM,SSMP,	2	0.788919
SLC25A32	chr 8	104413379	104413380	rs3098260	+	A	A/C	intron	17	1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,	2	0.787691
SLC25A32	chr 8	104414674	104414675	rs3133809	+	A	A/G	intron	16	1000GENOMES,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI	2	0.550228
SLC25A32	chr 8	104415117	104415118	rs3133810	+	C	C/T	intron	11	1000GENOMES,AFFY,BCM-HGSC-SUB,BL,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SC_JCM,SSMP,	2	0.904344
SLC25A32	chr 8	104417349	104417350	rs3133811	+	A	A/G	intron	17	1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_	2	0.733607
SLC25A32	chr 8	104419441	104419442	rs3133813	+	T	C/T	intron	18	1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,	2	0.261276
SLC25A32	chr 8	104421719	104421720	rs3133814	+	A	A/G	intron	13	1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,	2	0.732109
SLC25A32	chr 8	104422853	104422854	rs3133815	+	A	A/G	intron	12	1000GENOMES,ABI,BGI,BL,COMPLETE_GENOMICS,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_JCM,SSMP,TISHKOFF,	2	0.735133
SLC25A32	chr 8	104424336	104424337	rs3133816	+	C	C/G	intron	18	1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLU	2	0.737226
SLC25A32	chr 8	104426244	104426245	rs3133817	+	A	A/G	intron,near-gen	18	1000GENOMES,ABI,AFFY,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK	2	0.736441
SLC25A32	chr 8	104420099	104420100	rs3134254	+	T	C/T	intron	18	1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BUSHMAN,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLU	2	0.232726
SLC25A32	chr 8	104420199	104420200	rs3134255	+	T	A/T	intron	10	1000GENOMES,ABI,BCM_SSAHASNP,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_JCM,	2	0.260512
SLC25A32	chr 8	104420746	104420747	rs3134262	+	C	C/G	intron	13	1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,PERLEGEN	2	0.764041
SLC25A32	chr 8	104420981	104420982	rs3134266	+	T	A/T	intron	18	1000GENOMES,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA	2	0.449078
SLC25A32	chr 8	104421901	104421902	rs3134269	+	C	C/T	intron	6	1000GENOMES,COMPLETE_GENOMICS,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SC_JCM,	2	0.967638
SLC25A32	chr 8	104422814	104422815	rs3134279	+	T	C/T	intron	11	1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,SC_JCM,SSMP,TISHKOFF,	2	0.22319
SLC25A32	chr 8	104423173	104423174	rs3134284	+	T	C/T	intron	2	1000GENOMES,SC_JCM,	2	0.033507
SLC25A32	chr 8	104423293	104423294	rs3134285	+	G	A/G	intron	17	1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_J	2	0.499426
SLC25A32	chr 8	104423310	104423311	rs3134286	+	T	A/T	intron	15	1000GENOMES,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA-UK,PJP,S	2	0.233414
SLC25A32	chr 8	104423485	104423486	rs3134287	+	T	C/T	intron	21	1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGEN	2	0.50949
SLC25A32	chr 8	104423979	104423980	rs3134289	+	T	A/T	intron	18	1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLU	2	0.4946
SLC25A32	chr 8	104424189	104424190	rs3134290	+	C	C/T	intron	18	1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLU	2	0.550919
SLC25A32	chr 8	104425608	104425609	rs3134291	+	C	C/T	intron,near-gen	18	1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JC	2	0.547898
SLC25A32	chr 8	104426044	104426045	rs3134292	+	C	A/C	intron,near-gen	18	1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLU	2	0.258745
SLC25A32	chr 8	104426083	104426084	rs3134293	+	C	C/T	intron,near-gen	13	1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,S	2	0.793236
SLC25A32	chr 8	104426797	104426798	rs3134294	+	A	A/C	intron,near-gen	2	1000GENOMES,SC_JCM,	2	0.966057
SLC25A32	chr 8	104427358	104427359	rs3134295	+	A	A/C	ncRNA,missense,	25	1000GENOMES,AFFY,BCM-HGSC-SUB,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,EXOME_CHIP,GMI,HG	2	0.53701
SLC25A32	chr 8	104427540	104427541	rs3134296	+	C	C/T	ncRNA,missense,	23	1000GENOMES,ABI,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,EXOME_CHIP,GMI,HUMANGENOME_JCVI	2	0.817443
SLC25A32	chr 8	104413535	104413535	rs34813768	+	-	-/C	intron	9	1000GENOMES,ABI,BILGI_BIOE,BL,BUSHMAN,GMI,HUMANGENOME_JCVI,LUNTER,TISHKOFF,	2	0.735105
SLC25A32	chr 8	104412516	104412517	rs35225263	+	A	A/T	ncRNA,untransla	12	1000GENOMES,ABI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,PJP,SSMP,TISHKOFF	2	0.824171
SLC25A32	chr 8	104418309	104418310	rs4734708	+	C	C/T	intron	15	1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JC	2	0.094977
SLC25A32	chr 8	104426909	104426910	rs5893654	+	T	-/T	intron,near-gen	3	1000GENOMES,ABI,DEVINE_LAB,	2	0.443119
SLC25A32	chr 8	104422571	104422572	rs60977629	+	C	C/T	intron	2	1000GENOMES,HGSV,	2	0.989547
SLC25A32	chr 8	104414781	104414782	rs6995834	+	G	A/G	intron	3	1000GENOMES,BCM_SSAHASNP,TISHKOFF,	2	0.017857
SLC25A32	chr 8	104418566	104418567	rs7016654	+	A	A/C	intron	5	1000GENOMES,BCM_SSAHASNP,COMPLETE_GENOMICS,ILLUMINA-UK,TISHKOFF,	2	0.954629
SLC25A32	chr 8	104416800	104416801	rs71520812	+	C	C/T	intron	6	1000GENOMES,BL,ENSEMBL,HUMANGENOME_JCVI,SSMP,TISHKOFF,	2	0.943171
SLC25A32	chr 8	104414592	104414593	rs72675449	+	A	A/G	intron	4	1000GENOMES,COMPLETE_GENOMICS,GMI,TISHKOFF,	2	0.933486
SLC25A32	chr 8	104424021	104424022	rs73287934	+	G	A/G	intron	3	1000GENOMES,COMPLETE_GENOMICS,ILLUMINA-UK,	2	0.022915
SLC25A32	chr 8	104426791	104426792	rs73699799	+	C	C/T	intron,near-gen	2	1000GENOMES,ILLUMINA-UK,	2	0.987615
SLC25A32	chr 8	104412830	104412831	rs74387812	+	G	A/G	intron	2	1000GENOMES,GMI,	2	0.010101
SLC25A32	chr 8	104412634	104412635	rs74934875	+	G	A/G	ncRNA,untransla	4	1000GENOMES,CLINSEQ_SNP,ILLUMINA,NHLBI-ESP,	2	0.014779
SLC25A32	chr 8	104412983	104412984	rs76049463	+	G	C/G	intron	3	1000GENOMES,GMI,SSMP,	2	0.017842
SLC46A1	chr 17	26721894	26721895	rs1128161	-	G	C/T	untranslated-3	20	1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,H	2	0.355263
SLC46A1	chr 17	26721790	26721791	rs1128162	-	C	G/T	untranslated-3	22	1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BL,BUSHMAN,CGAP-GAI,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,	2	0.361258
SLC46A1	chr 17	26729077	26729078	rs113093738	+	T	C/T	intron	3	1000GENOMES,BUSHMAN,TISHKOFF,	2	0.026123
SLC46A1	chr 17	26722889	26722890	rs117451747	+	A	A/G	untranslated-3	4	1000GENOMES,CLINSEQ_SNP,ILLUMINA,NHLBI-ESP,	2	0.988728
SLC46A1	chr 17	26723831	26723832	rs118138669	+	C	C/T	untranslated-3	3	1000GENOMES,ILLUMINA,SSMP,	2	0.987815
SLC46A1	chr 17	26723706	26723707	rs12453383	+	G	A/G	untranslated-3	4	1000GENOMES,ABI,CSHL-HAPMAP,ENSEMBL,	2	0.010999
SLC46A1	chr 17	26729452	26729453	rs17719944	+	A	A/G	intron	8	1000GENOMES,BCMHGSC_JDW,COMPLETE_GENOMICS,ENSEMBL,ILLUMINA,KRIBB_YJKIM,PERLEGEN,RSG_UW,	2	0.947446
SLC46A1	chr 17	26732385	26732386	rs201076728	+	C	C/T	missense	3	CLINSEQ_SNP,EXOME_CHIP,NHLBI-ESP,	2	0.989
SLC46A1	chr 17	26725743	26725744	rs2239907	-	T	A/G	untranslated-3	24	1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BL,BUSHMAN,CGAP-GAI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSE	2	0.437645
SLC46A1	chr 17	26725264	26725265	rs2239908	-	G	C/T	untranslated-3	22	1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,H	2	0.380708
SLC46A1	chr 17	26723665	26723666	rs2239910	-	A	G/T	untranslated-3	22	1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,H	2	0.758781
SLC46A1	chr 17	26723612	26723613	rs2239911	-	G	A/C	untranslated-3	16	1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,ILLUMINA-UK,KRIBB	2	0.545127
SLC46A1	chr 17	26731724	26731725	rs35257694	+	G	A/G	coding-synon	2	APPLERA_GI,NHLBI-ESP,	2	0.014706
SLC46A1	chr 17	26732943	26732944	rs41297071	-	C	C/G/T	missense	3	EXOME_CHIP,NHLBI-ESP,RSG_UW,	3	0.010526
SLC46A1	chr 17	26729213	26729214	rs41297097	-	C	C/G	intron	4	1000GENOMES,ILLUMINA,NHLBI-ESP,RSG_UW,	2	0.021501
SLC46A1	chr 17	26725942	26725943	rs41297903	-	C	A/G	untranslated-3	4	1000GENOMES,COMPLETE_GENOMICS,ILLUMINA,RSG_UW,	2	0.01058
SLC46A1	chr 17	26725428	26725429	rs41297909	-	T	A/G	untranslated-3	5	1000GENOMES,GMI,ILLUMINA,RSG_UW,SSMP,	2	0.987881
SLC46A1	chr 17	26729427	26729428	rs4795436	+	C	C/T	intron	21	1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JC	2	0.129184
SLC46A1	chr 17	26732288	26732289	rs61732735	+	G	C/G	coding-synon	1	CORNELL,	2	0.986486
SLC46A1	chr 17	26724551	26724552	rs7225850	+	C	C/G	untranslated-3	5	1000GENOMES,BCM_SSAHASNP,ILLUMINA,RSG_UW,TISHKOFF,	2	0.989376
SLC46A1	chr 17	26723408	26723409	rs73273104	+	C	C/T	untranslated-3	4	1000GENOMES,COMPLETE_GENOMICS,ILLUMINA,TISHKOFF,	2	0.969266
SLC46A1	chr 17	26723821	26723822	rs739439	-	C	A/G	untranslated-3	13	1000GENOMES,ABI,BCMHGSC_JDW,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOF	2	0.097242
SLC46A1	chr 17	26727376	26727377	rs756768	-	T	A/C	intron	21	1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEM	2	0
SLC46A1	chr 17	26722644	26722645	rs8079943	+	G	A/G	untranslated-3	15	1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,PJP,SSMP	2	0.636322
SLC46A1	chr 17	26722727	26722728	rs8081240	+	C	C/T	untranslated-3	15	1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,PJP,SSMP	2	0.37032
TCN1	chr 11	59623432	59623433	rs1042613	-	G	C/T	coding-synon	20	1000GENOMES,AFFY,APPLERA_GI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,GMI,ILLUMINA,KRIBB_YJKIM,LEE,MG	2	0.703753
TCN1	chr 11	59633109	59633110	rs112170721	+	A	-/A	intron	3	1000GENOMES,BUSHMAN,LUNTER,	2	0.010092
TCN1	chr 11	59630772	59630772	rs113003128	+	-	-/A	intron	4	1000GENOMES,BUSHMAN,LUNTER,TISHKOFF,	2	0.93945
TCN1	chr 11	59623186	59623187	rs113149545	+	A	A/T	intron	3	1000GENOMES,BUSHMAN,TISHKOFF,	2	0.988991
TCN1	chr 11	59626407	59626408	rs113348812	+	G	A/G	intron	3	1000GENOMES,BUSHMAN,TISHKOFF,	2	0.011009
TCN1	chr 11	59624273	59624274	rs114817661	+	C	C/T	intron	2	1000GENOMES,TISHKOFF,	2	0.989983
TCN1	chr 11	59630338	59630339	rs115442273	+	A	A/G	intron	2	1000GENOMES,TISHKOFF,	2	0.98824
TCN1	chr 11	59631744	59631745	rs115485092	+	T	A/T	intron	2	1000GENOMES,TISHKOFF,	2	0.013502
TCN1	chr 11	59633586	59633587	rs116127821	+	A	A/C	intron	2	1000GENOMES,TISHKOFF,	2	0.987369
TCN1	chr 11	59628810	59628811	rs117699377	+	C	A/C	intron	2	1000GENOMES,ILLUMINA,	2	0.011749
TCN1	chr 11	59626895	59626896	rs11822978	+	C	C/T	intron	6	1000GENOMES,ABI,CSHL-HAPMAP,ENSEMBL,ILLUMINA,KRIBB_YJKIM,	2	0.988575
TCN1	chr 11	59627820	59627821	rs12269818	+	T	C/T	intron	3	1000GENOMES,COMPLETE_GENOMICS,SC_SNP,	2	0.015596
TCN1	chr 11	59630950	59630951	rs138028612	+	C	C/T	intron	2	1000GENOMES,TISHKOFF,	2	0.988522
TCN1	chr 11	59621700	59621704	rs145926120	+	AA	-/AAA	intron	2	1000GENOMES,LUNTER,	2	0.015151
TCN1	chr 11	59627689	59627690	rs148040945	+	C	C/T	intron	1	1000GENOMES,	2	0.988981
TCN1	chr 11	59622589	59622589	rs199752274	+	-	-/T	intron	1	1000GENOMES,	2	0.980257
TCN1	chr 11	59630835	59630836	rs2000613	+	G	G/T	intron	6	1000GENOMES,ABI,AFFY,ILLUMINA,SC_JCM,TSC-CSHL,	2	0.98405
TCN1	chr 11	59623377	59623378	rs34324219	+	C	A/C	missense	12	1000GENOMES,APPLERA_GI,BCM-HGSC-SUB,CLINSEQ_SNP,COMPLETE_GENOMICS,EXOME_CHIP,ILLUMINA,NHLBI-ESP,PERL	2	0.085682
TCN1	chr 11	59631534	59631535	rs34528912	+	C	C/T	missense	7	1000GENOMES,APPLERA_GI,CLINSEQ_SNP,EXOME_CHIP,ILLUMINA,NHLBI-ESP,PERLEGEN,	2	0.971403
TCN1	chr 11	59624535	59624536	rs519221	+	A	A/T	intron	14	1000GENOMES,ABI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,KWOK,PJP,SC_JCM,SNP500CANCER,SSMP,TIS	2	0.763132
TCN1	chr 11	59633492	59633493	rs526934	+	G	A/G	intron	24	1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,EXOME_CHIP,GMI,HGSV,HUMANG	2	0.79497
TCN1	chr 11	59629304	59629305	rs557564	+	C	C/T	intron	14	1000GENOMES,AFFY,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA,KRIBB_YJKIM,KWOK,SC_JCM,SC_SNP,SNP500CANC	4	0.002689
TCN1	chr 11	59627211	59627212	rs56807325	+	T	A/T	intron	6	1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,HGSV,ILLUMINA-UK,TISHKOFF,	2	0.060467
TCN1	chr 11	59632272	59632273	rs61903593	+	A	A/G	intron	3	1000GENOMES,BCMHGSC_JDW,ILLUMINA,	2	0.986685
TCN1	chr 11	59632209	59632210	rs73490907	+	A	A/G	intron	6	1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,ILLUMINA,ILLUMINA-UK,TISHKOFF,	2	0.938159
TCN1	chr 11	59628714	59628715	rs74612762	+	C	C/T	intron	2	1000GENOMES,TISHKOFF,	2	0.978223
TCN1	chr 11	59624196	59624197	rs75575106	+	G	C/G	intron	2	1000GENOMES,TISHKOFF,	2	0.010017
TCN1	chr 11	59628256	59628257	rs77232416	+	G	A/G	intron	2	1000GENOMES,ILLUMINA,	2	0.019582
TCN1	chr 11	59621083	59621084	rs77529726	+	G	C/G	intron	4	1000GENOMES,BUSHMAN,SSMP,TISHKOFF,	2	0.046725
TCN1	chr 11	59621009	59621010	rs78136883	+	G	G/T	intron	4	1000GENOMES,BUSHMAN,ILLUMINA,TISHKOFF,	2	0.965691
TCN1	chr 11	59628106	59628107	rs78157647	+	T	G/T	intron	2	1000GENOMES,BUSHMAN,	2	0.01055
TCN1	chr 11	59628687	59628688	rs78756297	+	G	G/T	intron	2	1000GENOMES,BCM-HGSC-SUB,	2	0.983014
TCN1	chr 11	59628092	59628093	rs79549875	+	A	A/C	intron	3	1000GENOMES,ILLUMINA,TISHKOFF,	2	0.977787
TCN1	chr 11	59633344	59633345	rs80029954	+	G	C/G	intron	3	1000GENOMES,GMI,SSMP,	2	0.021323
TCN2	chr 22	31022951	31022952	rs10418	+	C	C/T	untranslated-3	23	1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,CGAP-GAI,CSHL-HAPMAP,ENSEMBL,GMI,HGBASE,HGSV,HUMANGENOME_	2	0.740015
TCN2	chr 22	31015937	31015938	rs10439913	+	T	C/T	intron	17	1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,H	2	0.626369
TCN2	chr 22	31014571	31014572	rs111808252	+	G	A/G	intron	6	1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF,	2	0.16995
TCN2	chr 22	31004596	31004597	rs112812772	+	G	A/G	intron,near-gen	4	1000GENOMES,BUSHMAN,SSMP,TISHKOFF,	2	0.03072
TCN2	chr 22	31018974	31018975	rs1131603	+	T	C/T	missense	11	1000GENOMES,AFFY,APPLERA_GI,CLINSEQ_SNP,EXOME_CHIP,ILLUMINA,KRIBB_YJKIM,LEE,NHLBI-ESP,SEATTLESEQ,SEQ	2	0.03352
TCN2	chr 22	31022815	31022815	rs113702823	+	-	-/A	untranslated-3	5	1000GENOMES,BUSHMAN,LUNTER,SSMP,TISHKOFF,	2	0.901376
TCN2	chr 22	31008238	31008239	rs114048634	+	A	A/T	intron	1	1000GENOMES,	2	0.987805
TCN2	chr 22	31003606	31003607	rs114108004	+	G	A/G	intron,near-gen	1	1000GENOMES,	2	0.012195
TCN2	chr 22	31021209	31021210	rs114577274	+	T	A/T	intron	1	1000GENOMES,	2	0.01176
TCN2	chr 22	31020679	31020680	rs115095252	+	A	A/G	intron	1	1000GENOMES,	2	0.989111
TCN2	chr 22	31015217	31015218	rs115369988	+	C	C/G	intron	1	1000GENOMES,	2	0.987369
TCN2	chr 22	31007519	31007520	rs116365548	+	C	C/T	intron	2	1000GENOMES,ILLUMINA,	2	0.980546
TCN2	chr 22	31008332	31008333	rs116933452	+	C	C/T	intron	4	1000GENOMES,GMI,SSMP,TISHKOFF,	2	0.891232
TCN2	chr 22	31014005	31014006	rs117005270	+	C	C/T	intron	3	1000GENOMES,SSMP,TISHKOFF,	2	0.989556
TCN2	chr 22	31009117	31009118	rs11703570	+	T	A/T	intron	14	1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,PERLEGEN,	2	0.219836
TCN2	chr 22	31015984	31015985	rs11703609	+	A	A/T	intron	4	1000GENOMES,ABI,BL,CSHL-HAPMAP,	2	0.965187
TCN2	chr 22	31004987	31004988	rs117324970	+	G	A/G	intron,near-gen	2	1000GENOMES,ILLUMINA,	2	0.019582
TCN2	chr 22	31013373	31013374	rs117458738	+	C	C/T	missense	5	1000GENOMES,EXOME_CHIP,ILLUMINA,NHLBI-ESP,SSMP,	2	0.989991
TCN2	chr 22	31011898	31011899	rs117582294	+	G	A/G	intron	2	1000GENOMES,ILLUMINA,	2	0.01436
TCN2	chr 22	31013186	31013187	rs117808091	+	C	C/T	intron	2	1000GENOMES,ILLUMINA,	2	0.986945
TCN2	chr 22	31021411	31021412	rs117877464	+	G	G/T	intron	4	1000GENOMES,GMI,SSMP,TISHKOFF,	2	0.881636
TCN2	chr 22	31014890	31014891	rs117958009	+	G	A/G	intron	4	1000GENOMES,GMI,SSMP,TISHKOFF,	2	0.114447
TCN2	chr 22	31009838	31009839	rs11913239	+	C	C/T	intron	9	1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,ILLUMINA-UK,SSMP,TISHKOFF,	2	0.825629
TCN2	chr 22	31022634	31022635	rs12160073	+	C	C/T	untranslated-3	12	1000GENOMES,ABI,COMPLETE_GENOMICS,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,PJP,SC_SNP,SI_EXO,SSMP,TISHKOFF	2	0.914835
TCN2	chr 22	31014418	31014419	rs12160098	+	A	A/G	intron	4	1000GENOMES,SC_SNP,SSMP,TISHKOFF,	2	0.953168
TCN2	chr 22	31017716	31017717	rs12160394	+	C	C/T	intron	4	1000GENOMES,SC_SNP,SSMP,TISHKOFF,	2	0.945822
TCN2	chr 22	31022300	31022301	rs12168392	+	G	A/G	intron	7	1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,ILLUMINA-UK,SC_SNP,SNP500CANCER,TISHKOFF,	2	0.100309
TCN2	chr 22	31013788	31013789	rs12169435	+	C	C/T	intron	4	1000GENOMES,HGSV,SC_SNP,TISHKOFF,	2	0.980546
TCN2	chr 22	31022589	31022590	rs12169610	+	C	C/T	untranslated-3	9	1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,HGSV,ILLUMINA,ILLUMINA-UK,SC_SNP,SSMP,TISHKOFF,	2	0.902015
TCN2	chr 22	31020340	31020341	rs12485165	+	G	G/T	intron	6	1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,SSMP,	2	0.886801
TCN2	chr 22	31017402	31017403	rs13055009	+	C	C/T	intron	14	1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,SNP50	2	0.698999
TCN2	chr 22	31012672	31012673	rs13056240	+	A	A/G	intron	10	1000GENOMES,ABI,COMPLETE_GENOMICS,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF,	2	0.918956
TCN2	chr 22	31017342	31017343	rs13056378	+	T	C/T	intron	16	1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PERLE	2	0.302487
TCN2	chr 22	31020974	31020975	rs13057127	+	A	A/C	intron	11	1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BL,ENSEMBL,GMI,PJP,SSAHASNP,SSMP,TISHKOFF,	2	0.776352
TCN2	chr 22	31019234	31019234	rs138878342	+	-	-/C	intron	5	1000GENOMES,BL,GMI,LUNTER,WARNICH_LAB,	2	0.690083
TCN2	chr 22	31007936	31007939	rs141654209	+	AA	-/AAG	intron	3	1000GENOMES,LUNTER,SSMP,	2	0.102388
TCN2	chr 22	31016006	31016007	rs141821206	+	G	C/G	intron	1	1000GENOMES,	2	0.024334
TCN2	chr 22	31006613	31006613	rs143253871	+	-	-/T	intron	3	1000GENOMES,LUNTER,TISHKOFF,	2	0.981635
TCN2	chr 22	31021048	31021049	rs146674472	+	C	C/G	intron	4	1000GENOMES,GMI,SSMP,TISHKOFF,	2	0.88843
TCN2	chr 22	31007736	31007737	rs147831001	+	C	C/T	intron	2	1000GENOMES,TISHKOFF,	2	0.988522
TCN2	chr 22	31012956	31012958	rs149468246	+	AG	-/AG	intron	6	1000GENOMES,BILGI_BIOE,GMI,LUNTER,SSMP,TISHKOFF,	2	0.106061
TCN2	chr 22	31020113	31020114	rs150167372	+	T	C/T	intron	1	1000GENOMES,	2	0.10101
TCN2	chr 22	31017457	31017457	rs150245831	+	-	-/ATT	cds-indel	5	1000GENOMES,BL,LUNTER,PJP,TISHKOFF,	2	0.630395
TCN2	chr 22	31003560	31003561	rs16988828	+	A	A/G	intron,near-gen	9	1000GENOMES,BCM-HGSC-SUB,ENSEMBL,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF,	2	0.894023
TCN2	chr 22	31005513	31005514	rs16988838	+	G	C/G	intron	4	1000GENOMES,AFFY,KRIBB_YJKIM,PERLEGEN,	2	0.011314
TCN2	chr 22	31011922	31011923	rs16988855	+	T	C/T	intron	10	1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,PERLEGEN,SSMP,TISHKOFF,	2	0.183206
TCN2	chr 22	31011609	31011610	rs1801198	+	G	C/G	missense	33	1000GENOMES,ABI,APPLERA_GI,BCMHGSC_JDW,BGI,BL,BUSHMAN,CGAP-GAI,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HA	2	0.609673
TCN2	chr 22	31021456	31021457	rs182224918	+	T	A/T	intron	1	1000GENOMES,	2	0.011019
TCN2	chr 22	31019639	31019640	rs186778399	+	A	A/G	intron	1	1000GENOMES,	2	0.989899
TCN2	chr 22	31020066	31020067	rs190673036	+	A	A/T	intron	2	1000GENOMES,GMI,	2	0.804408
TCN2	chr 22	31020066	31020067	rs200469023	+	A	-/A	intron	1	1000GENOMES,	2	0.165289
TCN2	chr 22	31019698	31019702	rs200689569	+	AC	-/ACA	intron	1	1000GENOMES,	2	0.124426
TCN2	chr 22	31016145	31016146	rs200691136	+	A	-/A	intron	1	1000GENOMES,	2	0.015611
TCN2	chr 22	31014376	31014377	rs2009857	-	C	A/G	intron	10	1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA-UK,PERLEGEN,SSMP,TISHKOFF,TSC-CSHL,	2	0.166738
TCN2	chr 22	31014473	31014474	rs2009862	+	C	C/T	intron	20	1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HU	2	0.387392
TCN2	chr 22	31022271	31022272	rs2072194	+	G	A/G	intron	21	1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENO	2	0.637037
TCN2	chr 22	31022732	31022733	rs2072195	+	A	A/T	untranslated-3	10	1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI,HGBASE,ILLUMINA,ILLUMINA-UK,SSMP,TISHKOFF,YUSUKE,	2	0.805641
TCN2	chr 22	31003137	31003138	rs2240433	+	A	A/G	near-gene-5,unt	21	1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,	2	0.460802
TCN2	chr 22	31010996	31010997	rs2267162	+	C	C/T	intron	10	1000GENOMES,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA,ILLUMINA-UK,SSMP,TISHKOFF,YUSUKE,	2	0.819691
TCN2	chr 22	31011556	31011557	rs2267163	+	T	C/T	intron	27	1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,G	2	0.588671
TCN2	chr 22	31017397	31017398	rs2267164	+	T	C/T	intron	20	1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMA	2	0.630542
TCN2	chr 22	31017677	31017678	rs2267165	+	C	C/G	intron	4	1000GENOMES,GMI,SSMP,YUSUKE,	2	0.903122
TCN2	chr 22	31018077	31018078	rs2267166	+	G	A/G	intron	11	1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,SSMP,TISHKOFF,WI_SSAHASNP,YUSUKE,	2	0.170709
TCN2	chr 22	31013295	31013296	rs2283873	+	G	A/G	intron	12	1000GENOMES,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,GMI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,NHLBI-ESP,SSM	2	0.143786
TCN2	chr 22	31018645	31018646	rs2301955	+	C	C/T	intron	20	1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,	2	0.708443
TCN2	chr 22	31018776	31018777	rs2301956	+	G	A/G	intron	20	1000GENOMES,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,	2	0.6746
TCN2	chr 22	31018816	31018817	rs2301957	+	C	C/T	intron	19	1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMA	2	0.704611
TCN2	chr 22	31018883	31018884	rs2301958	+	G	C/G	intron	9	1000GENOMES,BCM-HGSC-SUB,BGI,BL,GMI,SI_EXO,SSMP,TISHKOFF,YUSUKE,	2	0.224961
TCN2	chr 22	31008284	31008285	rs2412993	+	C	C/T	intron	4	1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,TSC-CSHL,	2	0.943171
TCN2	chr 22	31003453	31003454	rs28704032	+	A	A/G	intron,near-gen	4	1000GENOMES,GMI,SSAHASNP,SSMP,	2	0.974761
TCN2	chr 22	31020523	31020523	rs34136060	+	-	-/TTC	cds-indel	4	1000GENOMES,ABI,GMI,LUNTER,	2	0.695592
TCN2	chr 22	31021816	31021817	rs34886169	+	C	C/G	intron	7	1000GENOMES,ABI,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,	2	0.946429
TCN2	chr 22	31014998	31014999	rs34978834	+	T	C/T	intron	9	1000GENOMES,ABI,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF,	2	0.080896
TCN2	chr 22	31021335	31021336	rs35307566	+	T	-/T	intron	5	1000GENOMES,ABI,GMI,LUNTER,SSMP,	2	0.034894
TCN2	chr 22	31011349	31011350	rs35838082	+	C	C/T	missense	14	1000GENOMES,APPLERA_GI,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,EXOME_CHIP,HGSV,ILLUMINA,ILLUMINA-UK,NH	2	0.924748
TCN2	chr 22	31008866	31008867	rs35915865	+	T	C/T	missense	9	1000GENOMES,APPLERA_GI,CLINSEQ_SNP,EXOME_CHIP,ILLUMINA,NHLBI-ESP,PERLEGEN,SI_EXO,SSMP,	2	0.010809
TCN2	chr 22	31013392	31013393	rs35997415	+	C	C/G	coding-synon	1	APPLERA_GI,	2	0.986842
TCN2	chr 22	31020151	31020152	rs4375972	+	T	C/T	intron	12	1000GENOMES,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SC_JCM,SC_SNP,SSAHASNP,SSM	2	0.620658
TCN2	chr 22	31006003	31006004	rs4820020	+	C	C/T	intron	8	1000GENOMES,AFFY,ILLUMINA,KRIBB_YJKIM,SC_SNP,SSMP,TISHKOFF,WI_SSAHASNP,	2	0.961499
TCN2	chr 22	31011881	31011882	rs4820021	+	A	A/T	intron	21	1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HG	3	0.13705
TCN2	chr 22	31019447	31019448	rs4820022	+	T	G/T	intron	4	1000GENOMES,SC_SNP,TISHKOFF,WI_SSAHASNP,	2	0.024826
TCN2	chr 22	31005243	31005244	rs4820880	+	C	A/C	intron	6	1000GENOMES,BUSHMAN,SC_SNP,SSMP,TISHKOFF,WI_SSAHASNP,	2	0.03072
TCN2	chr 22	31005249	31005250	rs4820881	+	A	A/G	intron	6	1000GENOMES,BUSHMAN,SC_SNP,SSMP,TISHKOFF,WI_SSAHASNP,	2	0.959193
TCN2	chr 22	31005292	31005293	rs4820882	+	G	A/G	intron	18	1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,I	2	0.473865
TCN2	chr 22	31008435	31008436	rs4820884	+	C	A/C	intron	6	1000GENOMES,BUSHMAN,SC_SNP,SSMP,TISHKOFF,WI_SSAHASNP,	2	0.03072
TCN2	chr 22	31012755	31012756	rs4820885	+	T	C/T	intron	15	1000GENOMES,ABI,BGI,BUSHMAN,COMPLETE_GENOMICS,DEVINE_LAB,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_SNP,SSAHAS	2	0.576519
TCN2	chr 22	31016538	31016539	rs4820886	+	T	G/T	intron	9	1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,HGSV,ILLUMINA,ILLUMINA-UK,PJP,TISHKOFF,WI_SSAHASNP,	2	0.101886
TCN2	chr 22	31016913	31016914	rs4820887	+	G	A/G	intron	9	1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,HGSV,ILLUMINA,KRIBB_YJKIM,PJP,TISHKOFF,WI_SSAHASNP,	2	0.078165
TCN2	chr 22	31017321	31017322	rs4820888	+	A	A/G	intron	19	1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUM	2	0.642644
TCN2	chr 22	31019043	31019044	rs4820889	+	G	A/G	missense	16	1000GENOMES,AFFY,BUSHMAN,CLINSEQ_SNP,CORNELL,EXOME_CHIP,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,SC_S	2	0.055431
TCN2	chr 22	31019456	31019457	rs4820890	+	A	A/G	intron	15	1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SC_SN	2	0.646709
TCN2	chr 22	31006701	31006702	rs56040857	+	T	G/T	intron	8	1000GENOMES,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,SSMP,	2	0.059012
TCN2	chr 22	31022889	31022890	rs56076607	+	C	C/T	untranslated-3	5	1000GENOMES,BUSHMAN,SI_EXO,SSMP,TISHKOFF,	2	0.989908
TCN2	chr 22	31005017	31005018	rs5749132	+	A	A/G	intron	13	1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,CSHL-HAPMAP,GMI,HUMANGENOME_JCVI,PERLEGEN,SC_SNP,SSAHASNP,SSMP,T	2	0.777826
TCN2	chr 22	31010241	31010242	rs5749134	+	G	C/G	intron	16	1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PER	2	0.307458
TCN2	chr 22	31011905	31011906	rs5749135	+	C	C/T	intron	18	1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJ	3	0.704252
TCN2	chr 22	31017739	31017740	rs5749137	+	G	G/T	intron	12	1000GENOMES,ABI,BCMHGSC_JDW,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SC_SNP,SSMP,TISHKO	2	0.690585
TCN2	chr 22	31006551	31006552	rs5753233	+	G	A/G	intron	6	1000GENOMES,BGI,GMI,ILLUMINA,SC_SNP,SSMP,	2	0.058312
TCN2	chr 22	31008239	31008240	rs5753234	+	A	A/T	intron	10	1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SC_SNP,	2	0.771978
TCN2	chr 22	31009376	31009377	rs5753235	+	C	C/T	intron	15	1000GENOMES,ABI,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_S	2	0.538321
TCN2	chr 22	31009819	31009820	rs5753236	+	G	C/G	intron	19	1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMA	2	0.591483
TCN2	chr 22	31016982	31016983	rs5753244	+	T	G/T	intron	19	1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEM	2	0.535763
TCN2	chr 22	31017776	31017777	rs5753246	+	T	C/T	intron	14	1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SC_S	2	0.36621
TCN2	chr 22	31018224	31018225	rs5753247	+	T	C/T	intron	15	1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SC	2	0.360476
TCN2	chr 22	31020089	31020090	rs5753249	+	C	C/T	intron	8	1000GENOMES,BCM-HGSC-SUB,BL,GMI,HUMANGENOME_JCVI,SC_SNP,SSAHASNP,SSMP,	2	0.697706
TCN2	chr 22	31020112	31020113	rs5753250	+	G	A/G	intron	12	1000GENOMES,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SC_SNP,SSAHAS	2	0.622202
TCN2	chr 22	31020399	31020400	rs5753252	+	T	C/T	intron	18	1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENO	2	0.659827
TCN2	chr 22	31005576	31005578	rs5844914	+	GG	-/GG	intron	8	1000GENOMES,BILGI_BIOE,DEVINE_LAB,GMI,HGSV,LUNTER,SSMP,TISHKOFF,	2	0.67034
TCN2	chr 22	31015719	31015720	rs58963750	+	C	C/T	intron	8	1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,HGSV,ILLUMINA,ILLUMINA-UK,SSMP,TISHKOFF,	2	0.922161
TCN2	chr 22	31008441	31008442	rs5994324	+	C	C/T	intron	4	1000GENOMES,BUSHMAN,SC_SNP,TISHKOFF,	2	0.978002
TCN2	chr 22	31004827	31004828	rs5997702	+	C	C/G	intron,near-gen	6	1000GENOMES,BUSHMAN,PERLEGEN,SC_SNP,SSMP,TISHKOFF,	2	0.970715
TCN2	chr 22	31010555	31010556	rs5997703	+	C	C/G	intron	17	1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,	2	0.704425
TCN2	chr 22	31010648	31010649	rs5997704	+	T	C/T	intron	20	1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOM	2	0.631255
TCN2	chr 22	31016910	31016911	rs5997706	+	A	A/G	intron	3	1000GENOMES,SC_SNP,TISHKOFF,	2	0.987805
TCN2	chr 22	31018123	31018124	rs5997707	+	A	A/G	intron	4	1000GENOMES,SC_SNP,SSMP,TISHKOFF,	2	0.945363
TCN2	chr 22	31011504	31011505	rs66752578	+	A	-/AG	intron	5	DEVINE_LAB,GMI,HUMANGENOME_JCVI,PJP,SNP500CANCER,	2	0.092683
TCN2	chr 22	31019728	31019732	rs67698685	+	AT	-/ATA	intron	5	1000GENOMES,BILGI_BIOE,DEVINE_LAB,LUNTER,SSMP,	2	0.197429
TCN2	chr 22	31018571	31018572	rs72558388	+	G	A/G	intron	3	1000GENOMES,ILLUMINA,SNP500CANCER,	2	0.017788
TCN2	chr 22	31022278	31022279	rs72558390	+	T	C/T	intron	6	1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,ILLUMINA-UK,SNP500CANCER,TISHKOFF,	2	0.056049
TCN2	chr 22	31022094	31022095	rs72558391	+	T	G/T	intron	6	1000GENOMES,BUSHMAN,GMI,SNP500CANCER,SSMP,TISHKOFF,	2	0.105487
TCN2	chr 22	31022261	31022262	rs72558392	+	G	G/T	intron	2	1000GENOMES,SNP500CANCER,	2	0.982212
TCN2	chr 22	31005009	31005010	rs7286107	+	T	C/T	intron	7	1000GENOMES,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,HGSV,ILLUMINA-UK,TISHKOFF,	2	0.050704
TCN2	chr 22	31018560	31018561	rs7286680	+	T	G/T	intron	14	1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HUMANGENOME_JCVI,PJP	2	0.302855
TCN2	chr 22	31015572	31015573	rs7288385	+	C	A/C	intron	10	1000GENOMES,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA-UK,PJP,SSMP,TISHKOFF,	2	0.16781
TCN2	chr 22	31015561	31015562	rs7288627	+	G	A/G	intron	11	1000GENOMES,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,PJP,SSMP,TISHKOFF,	2	0.167963
TCN2	chr 22	31004187	31004188	rs7289549	+	G	C/G	intron,near-gen	11	1000GENOMES,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA-UK,PERLEGEN,SC_SNP,SNP500CANCER,SSMP	2	0.266392
TCN2	chr 22	31011279	31011280	rs7290898	+	A	A/C/T	intron	14	1000GENOMES,AFFY,BCM_SSAHASNP,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KR	2	0.860245
TCN2	chr 22	31009751	31009752	rs73396379	+	T	C/T	intron	8	1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA,ILLUMINA-UK,SSMP,TISHKOFF,	2	0.174371
TCN2	chr 22	31014859	31014860	rs73396395	+	G	A/G	intron	7	1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA-UK,SSMP,TISHKOFF,	2	0.168421
TCN2	chr 22	31019632	31019633	rs73398305	+	G	A/G	intron	8	1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA,ILLUMINA-UK,SSMP,TISHKOFF,	2	0.170408
TCN2	chr 22	31010239	31010240	rs73881489	+	G	A/G	intron	5	1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,ILLUMINA-UK,TISHKOFF,	2	0.056829
TCN2	chr 22	31007918	31007919	rs740233	+	A	A/G	intron	17	1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,	2	0.671484
TCN2	chr 22	31008744	31008745	rs740234	-	A	C/T	intron	15	1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJ	2	0.107952
TCN2	chr 22	31013548	31013549	rs740235	+	G	A/G	intron	19	1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_	2	0.309202
TCN2	chr 22	31015603	31015604	rs74714074	+	C	C/T	intron	1	1000GENOMES,	2	0.989983
TCN2	chr 22	31010312	31010313	rs75772248	+	C	C/T	intron	5	1000GENOMES,BUSHMAN,ILLUMINA,NHLBI-ESP,TISHKOFF,	2	0.988073
TCN2	chr 22	31011068	31011069	rs757874	+	G	G/T	intron	12	1000GENOMES,ABI,AFFY,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,KRIBB_YJKIM,PJP,SSMP,TISHKOFF,TS	2	0.923077
TCN2	chr 22	31008536	31008537	rs76222424	+	C	C/T	intron	3	1000GENOMES,GMI,SSMP,	2	0.984848
TCN2	chr 22	31013920	31013921	rs76348547	+	G	G/T	intron	2	1000GENOMES,TISHKOFF,	2	0.949917
TCN2	chr 22	31013398	31013399	rs76802001	+	G	A/G	coding-synon	4	1000GENOMES,CLINSEQ_SNP,ILLUMINA,NHLBI-ESP,	2	0.022846
TCN2	chr 22	31021352	31021353	rs77517564	+	G	A/G	intron	1	1000GENOMES,	2	0.014233
TCN2	chr 22	31021609	31021610	rs79071604	+	C	A/C	intron	6	1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF,	2	0.171782
TCN2	chr 22	31003103	31003104	rs79083159	+	C	C/T	near-gene-5,unt	2	1000GENOMES,ILLUMINA,	2	0.989547
TCN2	chr 22	31016671	31016672	rs79657845	+	A	A/G	intron	2	1000GENOMES,TISHKOFF,	2	0.985627
TCN2	chr 22	31016985	31016986	rs79710322	+	T	G/T	intron	5	1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI,TISHKOFF,	2	0.027956
TCN2	chr 22	31008792	31008793	rs79711084	+	G	A/G	intron	4	1000GENOMES,BUSHMAN,ILLUMINA,TISHKOFF,	2	0.020642
TCN2	chr 22	31020068	31020069	rs79864370	+	T	A/T	intron	3	1000GENOMES,ENSEMBL,GMI,	2	0.224312
TCN2	chr 22	31018071	31018072	rs8141515	+	T	C/T	intron	10	1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,SSMP,TISHKOFF,WI_SSAHASNP,	2	0.143296
TCN2	chr 22	31006859	31006860	rs9606756	+	A	A/G	missense	20	1000GENOMES,AFFY,APPLERA_GI,BUSHMAN,CGAP-GAI,CLINSEQ_SNP,COMPLETE_GENOMICS,EXOME_CHIP,GMI,HGSV,ILLUM	2	0.884863
TCN2	chr 22	31016644	31016645	rs9606757	+	A	A/G	intron	5	1000GENOMES,GMI,SC_SNP,SSMP,TISHKOFF,	2	0.971854
TCN2	chr 22	31004625	31004626	rs9609017	+	G	C/G	intron,near-gen	17	1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JC	2	0.547814
TCN2	chr 22	31016081	31016082	rs9609019	+	G	A/G	intron	11	1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,ILLUMINA-UK,PJP,SC_SNP,SSMP,TISHKOFF,	2	0.082455
TCN2	chr 22	31007291	31007292	rs9619126	+	A	A/G	intron	6	1000GENOMES,HGSV,ILLUMINA,PJP,SC_SNP,TISHKOFF,	2	0.984484
TCN2	chr 22	31004126	31004127	rs9621047	+	G	A/G	intron,near-gen	19	1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUM	2	0.320535
TCN2	chr 22	31013418	31013419	rs9621049	+	C	C/T	missense	16	1000GENOMES,AFFY,APPLERA_GI,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,EXOME_CHIP,ILLUMINA,ILLUMINA-UK,KR	2	0.882287
TYMS	chr 18	662102	662103	rs1001761	-	G	C/T	intron	24	1000GENOMES,ABI,BCMHGSC_JDW,BGI,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,H	2	0.389649
TYMS	chr 18	660382	660383	rs1004474	+	A	A/G	intron	22	1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENO	2	0.4673
TYMS	chr 18	668375	668376	rs1051527	-	C	C/G	intron	20	1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,KRIBB	2	0.515961
TYMS	chr 18	672835	672836	rs1059393	-	A	C/T	intron,untransl	19	1000GENOMES,ABI,BCM_SSAHASNP,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,HGSV,HUMANGEN	2	0.11266
TYMS	chr 18	672791	672792	rs1059394	-	C	A/G	intron,untransl	22	1000GENOMES,ABI,BCMHGSC_JDW,BGI,BUSHMAN,CGAP-GAI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLU	2	0.484471
TYMS	chr 18	658534	658540	rs111834869	+	AG	-/AGT	intron,near-gen	4	1000GENOMES,BUSHMAN,GMI,LUNTER,	2	0.297248
TYMS	chr 18	670036	670038	rs112444526	+	AG	-/AG	intron	3	1000GENOMES,BUSHMAN,LUNTER,	2	0.022936
TYMS	chr 18	662077	662078	rs113333865	+	C	C/T	intron	3	1000GENOMES,BUSHMAN,TISHKOFF,	2	0.975275
TYMS	chr 18	666301	666302	rs113382317	+	T	G/T	intron	3	1000GENOMES,BUSHMAN,TISHKOFF,	2	0.023853
TYMS	chr 18	662214	662215	rs11540152	+	T	C/T	missense	3	CGAP-GAI,ILLUMINA,KRIBB_YJKIM,	2	0.087209
TYMS	chr 18	666321	666322	rs115838176	+	C	C/T	intron	2	1000GENOMES,TISHKOFF,	2	0.966899
TYMS	chr 18	658972	658973	rs115954259	+	G	G/T	intron,near-gen	1	1000GENOMES,	2	0.985627
TYMS	chr 18	672203	672204	rs116368112	+	T	G/T	intron,untransl	1	1000GENOMES,	2	0.010017
TYMS	chr 18	670617	670618	rs116411920	+	C	C/T	intron,untransl	2	1000GENOMES,ILLUMINA,	2	0.974739
TYMS	chr 18	658917	658918	rs116569088	+	A	A/G	intron,near-gen	2	1000GENOMES,TISHKOFF,	2	0.979965
TYMS	chr 18	668551	668552	rs116736801	+	G	C/G	intron	1	1000GENOMES,	2	0.010889
TYMS	chr 18	667690	667691	rs118049362	+	A	A/T	intron	2	1000GENOMES,GMI,	2	0.988251
TYMS	chr 18	662134	662135	rs11873890	+	A	A/G	intron	10	1000GENOMES,ABI,BUSHMAN,CLINSEQ_SNP,CSHL-HAPMAP,ENSEMBL,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,TISHKOFF,	2	0.971741
TYMS	chr 18	671833	671834	rs12958458	+	C	C/T	intron,untransl	8	1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,SSAHASNP,SSMP,TISHKOFF,	2	0.907221
TYMS	chr 18	672034	672035	rs12962403	+	C	C/T	intron,untransl	9	1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,HUMANGENOME_JCVI,SSAHASNP,SSMP,TISHKOFF,	2	0.90772
TYMS	chr 18	668238	668238	rs146056628	+	-	-/TCT	intron	3	1000GENOMES,BILGI_BIOE,LUNTER,	2	0.928375
TYMS	chr 18	669292	669296	rs147919381	+	TT	-/TTG	intron	5	1000GENOMES,BL,GMI,LUNTER,SSMP,	2	0.47888
TYMS	chr 18	664688	664689	rs150189430	+	C	C/T	intron	3	1000GENOMES,GMI,SSMP,	2	0.484389
TYMS	chr 18	673443	673449	rs151264360	+	TT	-/TTA	intron,cds-inde	3	1000GENOMES,GMI,LUNTER,	2	0.478421
TYMS	chr 18	668257	668258	rs15872	+	C	C/T	intron	20	1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BGI,BUSHMAN,CGAP-GAI,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK	2	0.485932
TYMS	chr 18	673443	673444	rs16430	-	T	-/CTT	intron,cds-inde	4	DEVINE_LAB,GMI,MARSHFIELD,PJP,	2	0.427719
TYMS	chr 18	667016	667017	rs1672569	-	A	A/T	intron	2	1000GENOMES,SC_JCM,	2	0.368687
TYMS	chr 18	668464	668465	rs16948305	+	C	C/T	intron	11	1000GENOMES,ABI,AFFY,BUSHMAN,COMPLETE_GENOMICS,HGSV,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF,	2	0.90797
TYMS	chr 18	669683	669684	rs16948322	+	T	C/T	intron	16	1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUM	2	0.481338
TYMS	chr 18	673210	673211	rs16948409	+	G	G/T	intron,untransl	5	1000GENOMES,ILLUMINA,KRIBB_YJKIM,PERLEGEN,TISHKOFF,	2	0.982759
TYMS	chr 18	673394	673395	rs16948421	+	G	A/G	intron,untransl	7	1000GENOMES,COMPLETE_GENOMICS,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SNP500CANCER,TISHKOFF,	2	0.052015
TYMS	chr 18	667076	667077	rs182891213	+	A	A/T	intron	3	1000GENOMES,GMI,SSMP,	2	0.836547
TYMS	chr 18	657656	657657	rs183205964	+	G	C/G	intron,untransl	1	1000GENOMES,	2	0.010101
TYMS	chr 18	665833	665834	rs183742746	+	T	A/T	intron	2	1000GENOMES,GMI,	2	0.016988
TYMS	chr 18	666135	666136	rs183940845	+	A	A/T	intron	1	1000GENOMES,	2	0.968779
TYMS	chr 18	664367	664368	rs184086822	+	A	A/G	intron	3	1000GENOMES,GMI,SSMP,	2	0.708907
TYMS	chr 18	667291	667292	rs185823373	+	A	A/T	intron	1	1000GENOMES,	2	0.812672
TYMS	chr 18	662662	662663	rs189809692	+	C	C/G	intron	1	1000GENOMES,	2	0.978421
TYMS	chr 18	658589	658590	rs192603316	+	C	C/T	intron,near-gen	1	1000GENOMES,	2	0.982553
TYMS	chr 18	665794	665795	rs193023028	+	G	A/G	intron	1	1000GENOMES,	2	0.028007
TYMS	chr 18	661811	661812	rs1970763	+	A	A/G	intron	19	1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOM	2	0.496577
TYMS	chr 18	661755	661756	rs2015944	-	T	A/G	intron	19	1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JC	2	0.415602
TYMS	chr 18	673442	673448	rs202243265	+	TT	-/TTT	intron,cds-inde	1	1000GENOMES,	2	0.429752
TYMS	chr 18	661916	661917	rs2124616	-	G	C/T	intron	9	1000GENOMES,ABI,COMPLETE_GENOMICS,ENSEMBL,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF,TSC-CSHL,	2	0.927264
TYMS	chr 18	661004	661005	rs2244500	-	A	C/T	intron	23	1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,	2	0.628794
TYMS	chr 18	659870	659871	rs2606240	-	A	C/T	intron,near-gen	18	1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,	2	0.60337
TYMS	chr 18	667769	667770	rs2606242	+	C	C/G	intron	12	1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA-UK,SC_JCM,SSMP,TISHKOF	2	0.562929
TYMS	chr 18	672042	672043	rs2606245	+	A	A/G	intron,untransl	16	1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,S	2	0.424726
TYMS	chr 18	662369	662370	rs2612095	+	T	C/T	intron	25	1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMAN	2	0.630889
TYMS	chr 18	666600	666601	rs2612096	+	A	A/G	intron	19	1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOM	2	0.398006
TYMS	chr 18	670994	670995	rs2612098	+	A	A/C	intron,untransl	19	1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUM	3	0.400249
TYMS	chr 18	671726	671727	rs2612099	+	G	A/G	intron,untransl	14	1000GENOMES,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PERLEGEN,PJP,SC_JCM,SSMP,T	2	0.450493
TYMS	chr 18	672362	672363	rs2612100	+	G	A/G	intron,untransl	23	1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMAN	2	0.538982
TYMS	chr 18	673085	673086	rs2790	+	A	A/G/T	intron,untransl	19	1000GENOMES,BCMHGSC_JDW,BGI,BUSHMAN,CGAP-GAI,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA	3	0.717496
TYMS	chr 18	666370	666371	rs2847149	+	G	A/G	intron	22	1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOM	2	0.633372
TYMS	chr 18	668299	668300	rs2847150	+	G	A/G	intron	18	1000GENOMES,AFFY,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,KRIBB_YJKIM,	2	0.512598
TYMS	chr 18	671166	671167	rs2847151	+	G	A/G	intron,untransl	19	1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA-U	2	0.482412
TYMS	chr 18	661646	661647	rs2847153	+	G	A/G	intron	18	1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA	2	0.29272
TYMS	chr 18	670540	670541	rs2847609	+	A	A/G	intron,untransl	19	1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,PJP	2	0.518375
TYMS	chr 18	666980	666981	rs2847610	+	A	A/T	intron	2	1000GENOMES,SC_JCM,	2	0.743802
TYMS	chr 18	658429	658430	rs2847612	+	G	C/G	intron,near-gen	10	1000GENOMES,BGI,BUSHMAN,GMI,ILLUMINA,ILLUMINA-UK,SC_JCM,SSMP,TISHKOFF,TSC-CSHL,	2	0.292449
TYMS	chr 18	659957	659958	rs2847613	+	T	C/T	intron,near-gen	15	1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI	2	0.43947
TYMS	chr 18	660646	660647	rs28503425	+	C	A/C	intron	11	1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,HGSV,HUMANGENOME_JCVI,ILLUMINA,PJP,SSAHASNP,SSMP,TISHK	2	0.090037
TYMS	chr 18	667897	667898	rs2853524	+	T	A/C/G	intron	19	1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUM	2	0.483977
TYMS	chr 18	667949	667950	rs2853525	+	T	A/C/T	intron	19	1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUM	3	0.00655
TYMS	chr 18	668035	668036	rs2853526	+	A	A/T	intron	15	1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,ENSEMBL,GMI,HGSV,ILLUMINA-UK,LEE,SC_JCM,SNP500CANCER,SSAHASNP	2	0.518387
TYMS	chr 18	668037	668038	rs2853527	+	A	A/T	intron	16	1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,LEE,SC_JCM,SNP5	2	0.518387
TYMS	chr 18	668649	668650	rs2853528	+	C	C/T	intron	20	1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,	2	0.48354
TYMS	chr 18	669532	669533	rs2853529	+	C	C/T	intron	12	1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_JCM,SSMP,TISHKOFF	2	0.525858
TYMS	chr 18	670413	670414	rs2853532	+	C	C/T	intron,untransl	21	1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JC	2	0.490997
TYMS	chr 18	658063	658064	rs2853533	+	G	C/G	intron,missense	15	1000GENOMES,BGI,BUSHMAN,CGAP-GAI,ENSEMBL,EXOME_CHIP,GMI,HGSV,ILLUMINA,MGC_GENOME_DIFF,NHLBI-ESP,SC_J	2	0.316397
TYMS	chr 18	671025	671026	rs2853534	+	C	C/T	intron,untransl	18	1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUM	2	0.518028
TYMS	chr 18	671056	671057	rs2853535	+	C	C/T	intron,untransl	19	1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUM	2	0.517115
TYMS	chr 18	671519	671520	rs2853536	+	C	C/T	intron,untransl	18	1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PERLEGEN,P	2	0.515632
TYMS	chr 18	671647	671648	rs2853537	+	A	A/T	intron,untransl	15	1000GENOMES,ABI,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PERLEGEN,PJP,	2	0.507916
TYMS	chr 18	672287	672288	rs2853538	+	C	C/T	intron,untransl	16	1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUM	2	0.515718
TYMS	chr 18	659828	659829	rs2853539	+	A	A/G	intron,near-gen	20	1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,E	2	0.400182
TYMS	chr 18	657684	657685	rs2853542	+	G	C/G	intron,untransl	5	1000GENOMES,CGAP-GAI,COMPLETE_GENOMICS,SC_JCM,SSMP,	2	0.38578
TYMS	chr 18	666506	666507	rs2853543	+	C	C/G	intron	19	1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOM	2	0.488242
TYMS	chr 18	671104	671105	rs2853740	+	T	C/T	intron,untransl	19	1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUM	2	0.435435
TYMS	chr 18	658169	658170	rs28602966	+	G	G/T	intron,nonsense	6	1000GENOMES,EXOME_CHIP,ILLUMINA,NHLBI-ESP,SSAHASNP,SSMP,	2	0.983012
TYMS	chr 18	662521	662522	rs2925470	-	T	A/T	intron	3	1000GENOMES,GMI,SC_JCM,	2	0.650138
TYMS	chr 18	666272	666273	rs34007153	+	C	A/C	intron	3	1000GENOMES,ILLUMINA,SNP500CANCER,	2	0.022047
TYMS	chr 18	673450	673451	rs34489327	+	T	-/TTA	intron,cds-inde	1	SNP500CANCER,	2	0.470052
TYMS	chr 18	666264	666265	rs34502878	+	C	C/T	intron	5	1000GENOMES,BGI,GMI,SNP500CANCER,SSMP,	2	0.933872
TYMS	chr 18	657645	657730	rs34743033	+	CC	lengt	unknown	1	SNP500CANCER,	3	0.336816
TYMS	chr 18	669295	669295	rs34795969	+	-	-/ATT	intron	1	SNP500CANCER,	2	0.520154
TYMS	chr 18	670471	670472	rs35143366	+	C	C/T	intron,untransl	2	1000GENOMES,SNP500CANCER,	2	0.986825
TYMS	chr 18	669186	669187	rs35710611	+	C	C/T	intron	4	1000GENOMES,ILLUMINA,NHLBI-ESP,SNP500CANCER,	2	0.988754
TYMS	chr 18	666532	666533	rs36080427	+	G	G/T	intron	2	1000GENOMES,SNP500CANCER,	2	0.986841
TYMS	chr 18	662246	662247	rs3786362	-	A	C/T	coding-synon	11	1000GENOMES,CLINSEQ_SNP,GMI,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,PHARMGKB_AB_DME,SEATTLESEQ,SSMP,	2	0.028828
TYMS	chr 18	670887	670888	rs3826626	-	T	A/G	intron,untransl	12	1000GENOMES,BGI,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,GMI,ILLUMINA,NHLBI-ESP,PERLEGEN,SSMP,TISHKOFF,	2	0.913225
TYMS	chr 18	658422	658423	rs3891167	+	A	A/G	intron,near-gen	17	1000GENOMES,ABI,BL,BUSHMAN,COMPLETE_GENOMICS,DEVINE_LAB,ENSEMBL,GMI,ILLUMINA-UK,PJP,SC_JCM,SEQUENOM,	2	0.78503
TYMS	chr 18	657645	657701	rs45445694	+	CC	lengt	unknown	1	PHARMGKB_PAAR-SJCRH,	6	0.428094
TYMS	chr 18	659176	659177	rs4987088	+	G	A/G	intron,near-gen	3	1000GENOMES,PERLEGEN,SNP500CANCER,	2	0.011754
TYMS	chr 18	659148	659149	rs4987089	+	A	A/G	intron,near-gen	3	1000GENOMES,PERLEGEN,SNP500CANCER,	2	0.98898
TYMS	chr 18	659235	659236	rs502396	+	C	C/T	intron,near-gen	18	1000GENOMES,ABI,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,KRIBB_YJKIM,	2	0.627612
TYMS	chr 18	671049	671050	rs523998	-	T	A/G	intron,untransl	5	1000GENOMES,ABI,BCM-HGSC-SUB,BL,SC_JCM,	2	0.964915
TYMS	chr 18	666099	666100	rs55688320	+	A	A/C	intron	7	BCMHGSC_JDW,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,SSMP,	2	0.25
TYMS	chr 18	666073	666074	rs55742849	+	A	A/G	intron	8	1000GENOMES,BCMHGSC_JDW,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSMP,	2	0.883349
TYMS	chr 18	665840	665841	rs55867764	+	G	A/G	intron	4	1000GENOMES,GMI,HGSV,SSMP,	2	0.01607
TYMS	chr 18	666031	666032	rs55897736	+	C	C/T	intron	6	1000GENOMES,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,SSMP,	2	0.931319
TYMS	chr 18	666096	666097	rs55906508	+	C	C/G	intron	7	BCMHGSC_JDW,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,SSMP,	2	0.25
TYMS	chr 18	666036	666037	rs56380264	+	A	A/G	intron	5	1000GENOMES,GMI,HGSV,HUMANGENOME_JCVI,SSMP,	2	0.93945
TYMS	chr 18	665842	665843	rs56405278	+	T	C/T	intron	4	1000GENOMES,GMI,HGSV,SSMP,	2	0.011478
TYMS	chr 18	671976	671977	rs60279109	+	A	A/G	intron,untransl	11	1000GENOMES,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF,	2	0.517399
TYMS	chr 18	666932	666933	rs62090121	+	T	A/T	intron	4	1000GENOMES,BCMHGSC_JDW,BL,ENSEMBL,	2	0.099083
TYMS	chr 18	666938	666939	rs62090122	+	A	A/T	intron	5	1000GENOMES,BCMHGSC_JDW,ENSEMBL,GMI,SSMP,	2	0.674312
TYMS	chr 18	666962	666963	rs62090123	+	A	A/T	intron	5	1000GENOMES,BCMHGSC_JDW,BL,ENSEMBL,SSMP,	2	0.765138
TYMS	chr 18	660441	660442	rs66567989	+	A	-/A	intron	8	1000GENOMES,BILGI_BIOE,DEVINE_LAB,HUMANGENOME_JCVI,LUNTER,PJP,SSMP,TISHKOFF,	2	0.072477
TYMS	chr 18	673015	673016	rs699517	+	C	C/T	untranslated-3	24	1000GENOMES,AFFY,BCMHGSC_JDW,BGI,BUSHMAN,CGAP-GAI,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILL	2	0.520312
TYMS	chr 18	669760	669764	rs72086130	+	CT	-/CTC	intron	6	1000GENOMES,BILGI_BIOE,BUSHMAN,DEVINE_LAB,LUNTER,SSMP,	2	0.089908
TYMS	chr 18	658331	658332	rs72634355	+	C	C/T	intron,untransl	7	1000GENOMES,BGI,BUSHMAN,GMI,ILLUMINA,SSMP,TISHKOFF,	2	0.712385
TYMS	chr 18	668519	668520	rs72867160	+	T	G/T	intron	7	1000GENOMES,BL,BUSHMAN,GMI,ILLUMINA,SSMP,TISHKOFF,	2	0.072936
TYMS	chr 18	658000	658001	rs73366471	+	G	A/G	intron,nonsense	7	1000GENOMES,COMPLETE_GENOMICS,EXOME_CHIP,ILLUMINA,NHLBI-ESP,SEATTLESEQ,TISHKOFF,	2	0.019266
TYMS	chr 18	660155	660156	rs73366479	+	A	A/G	intron,near-gen	3	1000GENOMES,COMPLETE_GENOMICS,ILLUMINA,	2	0.983945
TYMS	chr 18	658416	658417	rs75047328	+	G	G/T	intron,near-gen	4	1000GENOMES,GMI,SSMP,TISHKOFF,	2	0.989556
TYMS	chr 18	660366	660367	rs75075985	+	T	A/T	intron	4	1000GENOMES,BGI,GMI,SSMP,	2	0.072237
TYMS	chr 18	658034	658035	rs77400748	+	A	A/G	coding-synon,in	4	1000GENOMES,GMI,NHLBI-ESP,SSMP,	2	0.977961
TYMS	chr 18	669839	669840	rs77404636	+	T	C/T	intron	4	1000GENOMES,BGI,GMI,SSMP,	2	0.073977
TYMS	chr 18	667820	667821	rs78835614	+	C	C/T	intron	5	1000GENOMES,BGI,GMI,ILLUMINA,SSMP,	2	0.926458
TYMS	chr 18	664751	664752	rs79833699	+	C	C/T	intron	4	1000GENOMES,ENSEMBL,GMI,SSMP,	2	0.637156
TYMS	chr 18	666624	666625	rs8088781	+	C	C/T	intron	7	1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,SNP500CANCER,SSMP,TISHKOFF,WI_SSAHASNP,	2	0.910945

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