Gene Symbol | Chromosome | Start | End | rs ID | Strand | NCBI ref | Observed | Function | Submitter Count | Submitter | Frequency Count | Allele Frequency |
---|
MTRR | chr 5 | 7893810 | 7893811 | rs3776460 | - | T | A/C | intron | 7 | 1000GENOMES,BUSHMAN,GMI,PERLEGEN,SSMP,TISHKOFF,YUSUKE, | 2 | 0.925
|
MTRR | chr 5 | 7885226 | 7885227 | rs3776463 | - | A | C/T | intron | 10 | 1000GENOMES,BUSHMAN,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PJP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.074555 |
MTRR | chr 5 | 7878993 | 7878994 | rs3776464 | - | T | A/T | intron | 7 | 1000GENOMES,BUSHMAN,GMI,ILLUMINA,SSMP,TISHKOFF,YUSUKE, | 2 | 0.920323 |
MTRR | chr 5 | 7878975 | 7878976 | rs3776465 | - | T | A/G | intron | 15 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA | 2 | 0.749424 |
MTRR | chr 5 | 7876314 | 7876315 | rs3776467 | - | G | C/T | intron | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HG | 2 | 0.459712 |
MTRR | chr 5 | 7877490 | 7877491 | rs3797191 | - | A | C/T | intron | 14 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA-UK, | 2 | 0.22848
|
MTRR | chr 5 | 7887108 | 7887109 | rs3815743 | + | A | A/G | intron | 12 | 1000GENOMES,BGI,BL,COMPLETE_GENOMICS,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SI_EXO,SSMP,TISHKOFF,YUSUKE, | 2 | 0.846087 |
MTRR | chr 5 | 7895212 | 7895213 | rs3822441 | - | G | C/T | intron | 15 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA-UK,P | 2 | 0.764194 |
MTRR | chr 5 | 7894517 | 7894518 | rs3822442 | - | G | C/T | intron | 6 | 1000GENOMES,BUSHMAN,GMI,SSMP,TISHKOFF,YUSUKE, | 2 | 0.923395 |
MTRR | chr 5 | 7893467 | 7893468 | rs3822443 | - | A | C/T | intron | 7 | 1000GENOMES,BUSHMAN,GMI,PERLEGEN,SSMP,TISHKOFF,YUSUKE, | 2 | 0.074935 |
MTRR | chr 5 | 7872149 | 7872150 | rs3822444 | - | A | C/T | intron | 6 | 1000GENOMES,BUSHMAN,GMI,SSMP,TISHKOFF,YUSUKE, | 2 | 0.083525 |
MTRR | chr 5 | 7893072 | 7893073 | rs41282643 | + | T | G/T | intron | 7 | 1000GENOMES,ENSEMBL,HUMANGENOME_JCVI,ILLUMINA,NHLBI-ESP,PHARMGKB_PPII,SI_EXO, | 2 | 0.011916 |
MTRR | chr 5 | 7897535 | 7897536 | rs41283147 | + | G | A/G | intron | 2 | 1000GENOMES,SI_EXO, | 2 | 0.011019 |
MTRR | chr 5 | 7883526 | 7883527 | rs435836 | + | G | A/G | intron | 2 | 1000GENOMES,SC_JCM, | 2 | 0.016101 |
MTRR | chr 5 | 7899252 | 7899253 | rs49672 | - | A | C/T | intron | 24 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,E | 2 | 0.80153
|
MTRR | chr 5 | 7891209 | 7891210 | rs56219526 | + | A | A/G | intron | 8 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.796703 |
MTRR | chr 5 | 7888290 | 7888291 | rs57240487 | + | T | G/T | intron | 9 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,SSMP, | 2 | 0.200275 |
MTRR | chr 5 | 7878602 | 7878603 | rs57937475 | + | G | A/G | intron | 9 | 1000GENOMES,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA-UK,PHARMGKB_PPII,PJP,SSMP,TISHKOFF, | 2 | 0.199358 |
MTRR | chr 5 | 7896250 | 7896251 | rs57989551 | + | G | A/G | intron | 10 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,SSMP,TISHKOFF, | 2 | 0.199817 |
MTRR | chr 5 | 7885322 | 7885323 | rs60594625 | + | C | C/G | intron | 3 | 1000GENOMES,HGSV,ILLUMINA-UK, | 2 | 0.988532 |
MTRR | chr 5 | 7873917 | 7873918 | rs61536869 | + | G | A/G | intron | 8 | 1000GENOMES,BL,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.198442 |
MTRR | chr 5 | 7882210 | 7882211 | rs62342527 | + | C | C/T | intron | 10 | 1000GENOMES,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.910878 |
MTRR | chr 5 | 7884140 | 7884141 | rs62342528 | + | G | C/G | intron | 9 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,SSMP,TISHKOFF, | 2 | 0.200733 |
MTRR | chr 5 | 7888197 | 7888198 | rs62342530 | + | A | A/G | intron | 7 | 1000GENOMES,BCMHGSC_JDW,COMPLETE_GENOMICS,ENSEMBL,PJP,SSMP,TISHKOFF, | 2 | 0.898717 |
MTRR | chr 5 | 7892193 | 7892194 | rs62342552 | + | T | C/T | intron | 8 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF, | 2 | 0.200917 |
MTRR | chr 5 | 7899849 | 7899850 | rs62342557 | + | T | C/T | intron | 11 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,SSMP,TISHKOFF, | 2 | 0.244069 |
MTRR | chr 5 | 7879982 | 7879983 | rs6555501 | + | T | C/T | intron | 18 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL, | 2 | 0.448367 |
MTRR | chr 5 | 7876808 | 7876809 | rs67030816 | + | C | C/G | intron | 6 | 1000GENOMES,BGI,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF, | 2 | 0.85472
|
MTRR | chr 5 | 7882506 | 7882507 | rs6859960 | + | A | A/G | intron | 4 | 1000GENOMES,ABI,BCM_SSAHASNP,CSHL-HAPMAP, | 2 | 0.98944
|
MTRR | chr 5 | 7882425 | 7882426 | rs6864295 | + | T | C/T | intron | 5 | 1000GENOMES,ABI,BCM_SSAHASNP,CSHL-HAPMAP,SSAHASNP, | 2 | 0.01056
|
MTRR | chr 5 | 7871620 | 7871621 | rs6872300 | + | T | C/T | intron | 4 | 1000GENOMES,BCM_SSAHASNP,ILLUMINA,ILLUMINA-UK, | 2 | 0.011468 |
MTRR | chr 5 | 7896323 | 7896324 | rs6873330 | + | T | C/T | intron | 5 | 1000GENOMES,BCM_SSAHASNP,HGSV,ILLUMINA-UK,TISHKOFF, | 2 | 0.044037 |
MTRR | chr 5 | 7897060 | 7897061 | rs6874544 | + | T | C/T | coding-synon | 12 | 1000GENOMES,ABI,APPLERA_GI,BCM_SSAHASNP,BUSHMAN,CLINSEQ_SNP,CSHL-HAPMAP,EXOME_CHIP,ILLUMINA,NHLBI-ES | 2 | 0.018671 |
MTRR | chr 5 | 7885356 | 7885357 | rs6876840 | + | A | A/C | intron | 3 | 1000GENOMES,BCM_SSAHASNP,ILLUMINA, | 2 | 0.988981 |
MTRR | chr 5 | 7882976 | 7882977 | rs6879300 | + | G | G/T | intron | 2 | 1000GENOMES,BCM_SSAHASNP, | 2 | 0.98944
|
MTRR | chr 5 | 7898474 | 7898475 | rs71604190 | + | G | A/G | intron | 4 | 1000GENOMES,ENSEMBL,HUMANGENOME_JCVI,PJP, | 2 | 0.012374 |
MTRR | chr 5 | 7899418 | 7899419 | rs716537 | + | C | C/T | intron | 17 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIB | 4 | 0.013033 |
MTRR | chr 5 | 7869234 | 7869235 | rs72716536 | + | T | C/T | near-gene-5,unt | 9 | 1000GENOMES,BL,CLINSEQ_SNP,COMPLETE_GENOMICS,ILLUMINA,NHLBI-ESP,PHARMGKB_PPII,SSMP,TISHKOFF, | 2 | 0.170937 |
MTRR | chr 5 | 7880216 | 7880217 | rs72716537 | + | A | A/G | intron | 3 | 1000GENOMES,GMI,ILLUMINA, | 2 | 0.988251 |
MTRR | chr 5 | 7898730 | 7898731 | rs72716538 | + | G | A/G | intron | 2 | 1000GENOMES,GMI, | 2 | 0.011749 |
MTRR | chr 5 | 7869899 | 7869900 | rs73737651 | + | G | C/G | intron,near-gen | 6 | 1000GENOMES,BUSHMAN,GMI,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.094867 |
MTRR | chr 5 | 7894183 | 7894184 | rs74363291 | + | A | A/G | intron | 1 | 1000GENOMES, | 2 | 0.989121 |
MTRR | chr 5 | 7895207 | 7895208 | rs74648168 | + | T | C/T | intron | 1 | 1000GENOMES, | 2 | 0.010879 |
MTRR | chr 5 | 7880031 | 7880032 | rs75356060 | + | C | C/G | intron | 1 | 1000GENOMES, | 2 | 0.989991 |
MTRR | chr 5 | 7874985 | 7874986 | rs75696299 | + | A | A/G | intron | 4 | 1000GENOMES,BUSHMAN,ILLUMINA,TISHKOFF, | 2 | 0.969725 |
MTRR | chr 5 | 7869702 | 7869703 | rs75772655 | + | G | A/G | intron,near-gen | 4 | 1000GENOMES,BUSHMAN,SSMP,TISHKOFF, | 2 | 0.137156 |
MTRR | chr 5 | 7886286 | 7886287 | rs75875614 | + | T | G/T | intron | 3 | 1000GENOMES,BUSHMAN,PHARMGKB_PPII, | 2 | 0.011468 |
MTRR | chr 5 | 7869577 | 7869578 | rs75888760 | + | C | C/T | intron,near-gen | 6 | 1000GENOMES,BUSHMAN,GMI,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.857339 |
MTRR | chr 5 | 7884283 | 7884284 | rs76316119 | + | T | C/T | intron | 1 | 1000GENOMES, | 2 | 0.011019 |
MTRR | chr 5 | 7874663 | 7874664 | rs76730653 | + | A | A/G | intron | 5 | 1000GENOMES,BUSHMAN,GMI,SSMP,TISHKOFF, | 2 | 0.916055 |
MTRR | chr 5 | 7879949 | 7879950 | rs7703033 | + | G | A/G | intron | 16 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA,ILL | 2 | 0.233782 |
MTRR | chr 5 | 7880166 | 7880167 | rs7704596 | + | C | C/T | intron | 8 | 1000GENOMES,ABI,CSHL-HAPMAP,HGSV,ILLUMINA-UK,PJP,TISHKOFF,WI_SSAHASNP, | 2 | 0.951125 |
MTRR | chr 5 | 7871187 | 7871188 | rs7722483 | + | C | C/G | intron | 3 | 1000GENOMES,SI_EXO,WI_SSAHASNP, | 2 | 0.98944
|
MTRR | chr 5 | 7871489 | 7871490 | rs7725672 | + | G | A/G | intron | 4 | 1000GENOMES,ILLUMINA,KRIBB_YJKIM,WI_SSAHASNP, | 2 | 0.012289 |
MTRR | chr 5 | 7875962 | 7875963 | rs7730643 | + | A | A/G | intron | 15 | 1000GENOMES,ABI,AFFY,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGE | 2 | 0.807167 |
MTRR | chr 5 | 7883907 | 7883908 | rs77578255 | + | T | A/T | intron | 5 | 1000GENOMES,BUSHMAN,GMI,SSMP,TISHKOFF, | 2 | 0.074771 |
MTRR | chr 5 | 7894684 | 7894685 | rs77682018 | + | T | C/T | intron | 1 | 1000GENOMES, | 2 | 0.010879 |
MTRR | chr 5 | 7874159 | 7874160 | rs78306682 | + | G | A/G | intron | 5 | 1000GENOMES,BUSHMAN,GMI,SSMP,TISHKOFF, | 2 | 0.083945 |
MTRR | chr 5 | 7886097 | 7886098 | rs78869385 | + | A | A/G | intron | 3 | 1000GENOMES,PHARMGKB_PPII,TISHKOFF, | 2 | 0.985376 |
MTRR | chr 5 | 7875697 | 7875698 | rs79066534 | + | G | A/G | intron | 4 | 1000GENOMES,BUSHMAN,ILLUMINA,TISHKOFF, | 2 | 0.030706 |
MTRR | chr 5 | 7869883 | 7869884 | rs79227708 | + | G | A/G | intron,near-gen | 5 | 1000GENOMES,BUSHMAN,GMI,SSMP,TISHKOFF, | 2 | 0.083486 |
MTRR | chr 5 | 7886641 | 7886642 | rs79408444 | + | C | A/C | intron | 2 | 1000GENOMES,PHARMGKB_PPII, | 2 | 0.011134 |
MTRR | chr 5 | 7898030 | 7898030 | rs79421232 | + | - | -/T | intron | 6 | 1000GENOMES,BGI,BILGI_BIOE,GMI,LUNTER,SSMP, | 2 | 0.843434 |
MTRR | chr 5 | 7872194 | 7872195 | rs79461020 | + | A | A/G | intron | 1 | 1000GENOMES, | 2 | 0.987369 |
MTRR | chr 5 | 7891595 | 7891596 | rs79735541 | + | A | A/C | intron | 4 | 1000GENOMES,BUSHMAN,NHLBI-ESP,PHARMGKB_PPII, | 2 | 0.988532 |
MTRR | chr 5 | 7880516 | 7880517 | rs79775925 | + | C | C/T | intron | 6 | 1000GENOMES,BUSHMAN,GMI,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.920183 |
MTRR | chr 5 | 7900832 | 7900833 | rs8659 | + | T | A/T | untranslated-3 | 20 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,CGAP-GAI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMAN | 3 | 0.478466 |
MTRR | chr 5 | 7900597 | 7900598 | rs9282787 | + | T | C/T | untranslated-3 | 10 | 1000GENOMES,BL,ENSEMBL,HUMANGENOME_JCVI,ILLUMINA,PERLEGEN,PJP,SNP500CANCER,SSMP,TISHKOFF, | 2 | 0.098682 |
MTRR | chr 5 | 7900631 | 7900632 | rs9282788 | + | T | C/T | untranslated-3 | 5 | 1000GENOMES,ABI,CSHL-HAPMAP,ILLUMINA,SNP500CANCER, | 2 | 0.010045 |
MTRR | chr 5 | 7900814 | 7900815 | rs9282789 | + | A | A/G | untranslated-3 | 6 | 1000GENOMES,ILLUMINA,ILLUMINA-UK,PERLEGEN,SNP500CANCER,TISHKOFF, | 2 | 0.950462 |
MTRR | chr 5 | 7900818 | 7900819 | rs9282790 | + | C | A/C | untranslated-3 | 3 | 1000GENOMES,ILLUMINA,SNP500CANCER, | 2 | 0.011696 |
MTRR | chr 5 | 7900711 | 7900712 | rs9332 | - | G | C/T | untranslated-3 | 17 | 1000GENOMES,ABI,BUSHMAN,CGAP-GAI,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK, | 2 | 0.767949 |
SARDH | chr 9 | 136602278 | 136602279 | rs10113974 | + | C | A/C | intron | 3 | 1000GENOMES,TISHKOFF,WI_SSAHASNP, | 2 | 0.016986 |
SARDH | chr 9 | 136548439 | 136548440 | rs10114133 | + | G | A/G | intron | 9 | 1000GENOMES,ABI,CSHL-HAPMAP,ENSEMBL,HGSV,ILLUMINA-UK,SC_SNP,TISHKOFF,WI_SSAHASNP, | 2 | 0.035797 |
SARDH | chr 9 | 136581719 | 136581720 | rs10117852 | + | C | C/T | intron | 3 | 1000GENOMES,SSMP,WI_SSAHASNP, | 2 | 0.764984 |
SARDH | chr 9 | 136560383 | 136560384 | rs10117985 | + | G | A/G | intron | 4 | 1000GENOMES,BUSHMAN,TISHKOFF,WI_SSAHASNP, | 2 | 0.07844
|
SARDH | chr 9 | 136590622 | 136590623 | rs10121093 | + | C | C/T | intron | 3 | 1000GENOMES,TISHKOFF,WI_SSAHASNP, | 2 | 0.988981 |
SARDH | chr 9 | 136537497 | 136537498 | rs10121428 | + | G | A/G | intron | 7 | 1000GENOMES,HGSV,ILLUMINA-UK,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.0121
|
SARDH | chr 9 | 136600268 | 136600269 | rs10124430 | + | C | C/T | intron | 3 | 1000GENOMES,TISHKOFF,WI_SSAHASNP, | 2 | 0.989599 |
SARDH | chr 9 | 136549655 | 136549656 | rs1076149 | - | T | A/T | intron | 20 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI, | 2 | 0.476482 |
SARDH | chr 9 | 136573172 | 136573173 | rs10821518 | + | C | C/G | intron | 15 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMA | 2 | 0.524613 |
SARDH | chr 9 | 136591518 | 136591519 | rs10821520 | + | G | A/G | intron | 4 | 1000GENOMES,CSHL-HAPMAP,GMI,SC_SNP, | 2 | 0.148301 |
SARDH | chr 9 | 136595699 | 136595700 | rs10821521 | + | C | C/G | intron | 9 | 1000GENOMES,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,GMI,SC_SNP,SSMP,TISHKOFF, | 2 | 0.823879 |
SARDH | chr 9 | 136538518 | 136538519 | rs10821578 | + | C | C/T | intron | 15 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMI | 2 | 0.676247 |
SARDH | chr 9 | 136560243 | 136560244 | rs10993767 | + | G | A/G | intron | 6 | 1000GENOMES,AFFY,BUSHMAN,KRIBB_YJKIM,SC_SNP,TISHKOFF, | 2 | 0.024732 |
SARDH | chr 9 | 136563925 | 136563926 | rs10993768 | + | C | C/T | intron | 11 | 1000GENOMES,AFFY,BL,COMPLETE_GENOMICS,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SC_SNP,SSMP, | 2 | 0.70044
|
SARDH | chr 9 | 136564487 | 136564488 | rs10993769 | + | C | C/T | intron | 8 | 1000GENOMES,BL,COMPLETE_GENOMICS,GMI,HGSV,PJP,SC_SNP,SSMP, | 2 | 0.665293 |
SARDH | chr 9 | 136564574 | 136564575 | rs10993770 | + | C | A/C | intron | 9 | 1000GENOMES,BL,COMPLETE_GENOMICS,GMI,HGSV,PJP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.339744 |
SARDH | chr 9 | 136573185 | 136573186 | rs10993773 | + | C | C/T | intron | 3 | 1000GENOMES,SC_SNP,TISHKOFF, | 2 | 0.989111 |
SARDH | chr 9 | 136586188 | 136586189 | rs10993775 | + | G | A/G | intron | 13 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA,PERLEGEN,PJP,SC_SNP, | 2 | 0.186385 |
SARDH | chr 9 | 136586794 | 136586795 | rs10993776 | + | G | A/G | intron | 10 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,SC_SNP,SSMP, | 2 | 0.170164 |
SARDH | chr 9 | 136590274 | 136590275 | rs10993778 | + | A | A/C | intron | 14 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,KRIBB_Y | 2 | 0.819578 |
SARDH | chr 9 | 136598925 | 136598926 | rs10993780 | + | C | C/G | intron | 12 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,NHLBI-ESP,SC_SN | 2 | 0.864011 |
SARDH | chr 9 | 136599533 | 136599534 | rs10993781 | + | T | C/T | intron | 10 | 1000GENOMES,BCMHGSC_JDW,BL,BUSHMAN,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_SNP,SSMP, | 2 | 0.410821 |
SARDH | chr 9 | 136530556 | 136530557 | rs10993952 | + | C | C/T | intron | 13 | 1000GENOMES,ABI,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.691674 |
SARDH | chr 9 | 136530587 | 136530588 | rs10993953 | + | C | C/T | intron | 14 | 1000GENOMES,ABI,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,PJP,SC_SNP,SSMP, | 2 | 0.698536 |
SARDH | chr 9 | 136532316 | 136532317 | rs10993955 | + | T | G/T | intron | 10 | 1000GENOMES,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,PJP,SC_SNP, | 2 | 0.583333 |
SARDH | chr 9 | 136532411 | 136532412 | rs10993956 | + | C | C/T | intron | 11 | 1000GENOMES,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.663462 |
SARDH | chr 9 | 136533442 | 136533443 | rs10993957 | + | C | C/T | intron | 7 | 1000GENOMES,BCMHGSC_JDW,BGI,GMI,SC_SNP,SSAHASNP,SSMP, | 2 | 0.507492 |
SARDH | chr 9 | 136535676 | 136535677 | rs10993958 | + | G | A/G | intron | 5 | 1000GENOMES,ILLUMINA,NHLBI-ESP,SC_SNP,SI_EXO, | 2 | 0.033072 |
SARDH | chr 9 | 136543038 | 136543039 | rs10993960 | + | G | A/G | intron | 8 | 1000GENOMES,ABI,CSHL-HAPMAP,ENSEMBL,ILLUMINA-UK,PJP,SC_SNP,TISHKOFF, | 2 | 0.041629 |
SARDH | chr 9 | 136548264 | 136548265 | rs10993962 | + | A | A/C | intron | 3 | 1000GENOMES,SC_SNP,TISHKOFF, | 2 | 0.95264
|
SARDH | chr 9 | 136592112 | 136592113 | rs111240123 | + | T | G/T | intron | 4 | 1000GENOMES,BUSHMAN,ILLUMINA,SSMP, | 2 | 0.037156 |
SARDH | chr 9 | 136549473 | 136549474 | rs111288338 | + | C | C/T | intron | 4 | 1000GENOMES,BCM-HGSC-SUB,ILLUMINA,SSMP, | 2 | 0.982158 |
SARDH | chr 9 | 136588591 | 136588592 | rs111289611 | + | A | A/G | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.969266 |
SARDH | chr 9 | 136565855 | 136565857 | rs111293061 | + | CG | -/CG | intron | 5 | 1000GENOMES,BUSHMAN,GMI,LUNTER,SSMP, | 2 | 0.538532 |
SARDH | chr 9 | 136579594 | 136579595 | rs111293363 | + | G | A/G | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.011927 |
SARDH | chr 9 | 136601768 | 136601769 | rs111389997 | + | C | C/T | intron | 7 | 1000GENOMES,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF, | 2 | 0.864345 |
SARDH | chr 9 | 136591512 | 136591513 | rs111415717 | + | A | A/G | intron | 2 | 1000GENOMES,BUSHMAN, | 2 | 0.974312 |
SARDH | chr 9 | 136547224 | 136547225 | rs111575370 | + | C | C/T | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.979377 |
SARDH | chr 9 | 136535008 | 136535009 | rs111612233 | + | G | A/G | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.013303 |
SARDH | chr 9 | 136551433 | 136551434 | rs111959240 | + | G | A/G | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.010555 |
SARDH | chr 9 | 136547981 | 136547982 | rs112248351 | + | G | G/T | intron | 2 | 1000GENOMES,COMPLETE_GENOMICS, | 2 | 0.931651 |
SARDH | chr 9 | 136535224 | 136535225 | rs112397661 | + | C | C/T | intron | 4 | 1000GENOMES,BUSHMAN,SSMP,TISHKOFF, | 2 | 0.975688 |
SARDH | chr 9 | 136567830 | 136567831 | rs112480855 | + | C | C/T | intron | 2 | 1000GENOMES,BUSHMAN, | 2 | 0.987632 |
SARDH | chr 9 | 136582378 | 136582379 | rs112637634 | + | A | A/G | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.976627 |
SARDH | chr 9 | 136596221 | 136596222 | rs112688726 | + | G | A/G | intron | 2 | 1000GENOMES,BUSHMAN, | 2 | 0.01698
|
SARDH | chr 9 | 136587695 | 136587696 | rs112797070 | + | T | C/T | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.025688 |
SARDH | chr 9 | 136583938 | 136583939 | rs112875282 | + | G | A/G | intron | 4 | 1000GENOMES,BUSHMAN,ILLUMINA,TISHKOFF, | 2 | 0.014679 |
SARDH | chr 9 | 136548159 | 136548160 | rs113064495 | + | C | C/G | intron | 4 | 1000GENOMES,BUSHMAN,SSMP,TISHKOFF, | 2 | 0.957798 |
SARDH | chr 9 | 136537870 | 136537871 | rs113073336 | + | G | A/G | intron | 4 | 1000GENOMES,BUSHMAN,ILLUMINA,TISHKOFF, | 2 | 0.027536 |
SARDH | chr 9 | 136548634 | 136548635 | rs113092824 | + | G | C/G | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.025229 |
SARDH | chr 9 | 136601200 | 136601201 | rs113297677 | + | G | A/G | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.013303 |
SARDH | chr 9 | 136598649 | 136598650 | rs113310429 | + | G | A/G | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.013303 |
SARDH | chr 9 | 136570603 | 136570604 | rs113400953 | + | C | C/T | intron | 2 | 1000GENOMES,COMPLETE_GENOMICS, | 2 | 0.985321 |
SARDH | chr 9 | 136573057 | 136573058 | rs113548958 | + | T | C/T | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.012844 |
SARDH | chr 9 | 136585313 | 136585314 | rs113613980 | + | C | C/T | intron | 2 | 1000GENOMES,BUSHMAN, | 2 | 0.98945
|
SARDH | chr 9 | 136569852 | 136569853 | rs113626931 | + | C | C/T | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,SSMP,TISHKOFF, | 2 | 0.955046 |
SARDH | chr 9 | 136548134 | 136548135 | rs113637854 | + | C | C/T | intron | 4 | 1000GENOMES,BUSHMAN,ILLUMINA,TISHKOFF, | 2 | 0.976147 |
SARDH | chr 9 | 136552263 | 136552264 | rs113703473 | + | C | C/T | intron | 4 | 1000GENOMES,BUSHMAN,SSMP,TISHKOFF, | 2 | 0.958238 |
SARDH | chr 9 | 136530937 | 136530938 | rs113718676 | + | C | C/T | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.983486 |
SARDH | chr 9 | 136580016 | 136580017 | rs114186124 | + | C | C/G | intron | 1 | 1000GENOMES, | 2 | 0.989983 |
SARDH | chr 9 | 136573263 | 136573264 | rs114270749 | + | G | A/G/T | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.016986 |
SARDH | chr 9 | 136590123 | 136590124 | rs114296956 | + | C | C/T | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.989111 |
SARDH | chr 9 | 136596113 | 136596114 | rs114613451 | + | A | A/C | intron | 1 | 1000GENOMES, | 2 | 0.989547 |
SARDH | chr 9 | 136603436 | 136603437 | rs115330907 | + | C | C/T | intron,untransl | 3 | 1000GENOMES,ILLUMINA,TISHKOFF, | 2 | 0.987369 |
SARDH | chr 9 | 136573300 | 136573301 | rs115340164 | + | G | A/G | intron | 1 | 1000GENOMES, | 2 | 0.016986 |
SARDH | chr 9 | 136570227 | 136570228 | rs115340872 | + | C | A/C | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.010889 |
SARDH | chr 9 | 136542368 | 136542369 | rs115357376 | + | G | A/G | intron | 1 | 1000GENOMES, | 2 | 0.015244 |
SARDH | chr 9 | 136557822 | 136557823 | rs115404731 | + | C | A/C | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.063589 |
SARDH | chr 9 | 136591901 | 136591902 | rs115536347 | + | G | A/G | intron | 4 | 1000GENOMES,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.021937 |
SARDH | chr 9 | 136593041 | 136593042 | rs115647702 | + | C | C/T | intron | 1 | 1000GENOMES, | 2 | 0.971254 |
SARDH | chr 9 | 136549821 | 136549822 | rs115676033 | + | G | C/G | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.018293 |
SARDH | chr 9 | 136549089 | 136549090 | rs115689738 | + | C | C/T | intron | 1 | 1000GENOMES, | 2 | 0.988676 |
SARDH | chr 9 | 136534480 | 136534481 | rs115697671 | + | C | C/G | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.983449 |
SARDH | chr 9 | 136572914 | 136572915 | rs115778998 | + | G | A/G | intron | 1 | 1000GENOMES, | 2 | 0.016986 |
SARDH | chr 9 | 136545811 | 136545812 | rs116098477 | + | G | A/G | intron | 1 | 1000GENOMES, | 2 | 0.015679 |
SARDH | chr 9 | 136581662 | 136581663 | rs116099697 | + | C | C/T | intron | 1 | 1000GENOMES, | 2 | 0.961093 |
SARDH | chr 9 | 136571917 | 136571918 | rs116169370 | + | G | A/G | intron | 1 | 1000GENOMES, | 2 | 0.020906 |
SARDH | chr 9 | 136552355 | 136552356 | rs116421812 | + | G | A/G | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.014373 |
SARDH | chr 9 | 136535540 | 136535541 | rs116422514 | + | C | C/G | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.985192 |
SARDH | chr 9 | 136602869 | 136602870 | rs116423373 | + | C | C/T | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.977352 |
SARDH | chr 9 | 136575325 | 136575326 | rs116423679 | + | C | C/T | intron | 1 | 1000GENOMES, | 2 | 0.989983 |
SARDH | chr 9 | 136586922 | 136586923 | rs116494950 | + | G | C/G | intron | 1 | 1000GENOMES, | 2 | 0.010453 |
SARDH | chr 9 | 136557474 | 136557475 | rs116496829 | + | C | C/T | intron | 3 | 1000GENOMES,ILLUMINA,TISHKOFF, | 2 | 0.940331 |
SARDH | chr 9 | 136563802 | 136563803 | rs116580241 | + | A | A/G | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.989547 |
SARDH | chr 9 | 136546538 | 136546539 | rs116622390 | + | G | A/G | intron | 1 | 1000GENOMES, | 2 | 0.012631 |
SARDH | chr 9 | 136579695 | 136579696 | rs116640041 | + | C | C/T | intron | 4 | 1000GENOMES,MPI_MOLGEN,SSMP,TISHKOFF, | 2 | 0.949503 |
SARDH | chr 9 | 136529501 | 136529502 | rs116729620 | + | G | A/G | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.027003 |
SARDH | chr 9 | 136563266 | 136563267 | rs116732447 | + | A | A/G | intron | 1 | 1000GENOMES, | 2 | 0.985192 |
SARDH | chr 9 | 136596869 | 136596870 | rs116751334 | + | T | C/T | intron | 3 | 1000GENOMES,ILLUMINA,TISHKOFF, | 2 | 0.010453 |
SARDH | chr 9 | 136566597 | 136566598 | rs116753788 | + | G | G/T | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.989547 |
SARDH | chr 9 | 136546209 | 136546210 | rs116807502 | + | C | C/T | intron | 1 | 1000GENOMES, | 2 | 0.986498 |
SARDH | chr 9 | 136580566 | 136580567 | rs116938429 | + | C | C/T | intron | 3 | 1000GENOMES,MPI_MOLGEN,SSMP, | 2 | 0.984334 |
SARDH | chr 9 | 136582697 | 136582698 | rs117059013 | + | C | C/T | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.989556 |
SARDH | chr 9 | 136533564 | 136533565 | rs117596235 | + | T | C/T | intron | 1 | 1000GENOMES, | 2 | 0.118799 |
SARDH | chr 9 | 136532094 | 136532095 | rs117630211 | + | A | A/G | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.986075 |
SARDH | chr 9 | 136590985 | 136590986 | rs117806387 | + | G | G/T | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.952567 |
SARDH | chr 9 | 136563188 | 136563189 | rs117970934 | + | G | A/G | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.016536 |
SARDH | chr 9 | 136534857 | 136534858 | rs118108519 | + | G | A/G | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.011314 |
SARDH | chr 9 | 136594869 | 136594870 | rs118112075 | + | C | C/T | intron | 4 | 1000GENOMES,CLINSEQ_SNP,ILLUMINA,NHLBI-ESP, | 2 | 0.982631 |
SARDH | chr 9 | 136583561 | 136583562 | rs118160162 | + | T | C/T | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.011749 |
SARDH | chr 9 | 136579112 | 136579113 | rs11999717 | + | C | C/T | intron | 3 | 1000GENOMES,CSHL-HAPMAP,ENSEMBL, | 2 | 0.986722 |
SARDH | chr 9 | 136579116 | 136579117 | rs11999718 | + | C | C/G | intron | 3 | 1000GENOMES,CSHL-HAPMAP,ENSEMBL, | 2 | 0.986722 |
SARDH | chr 9 | 136579476 | 136579477 | rs12006070 | + | G | A/G | intron | 4 | 1000GENOMES,ABI,CSHL-HAPMAP,ENSEMBL, | 2 | 0.013291 |
SARDH | chr 9 | 136531838 | 136531839 | rs12235666 | + | C | C/G | intron | 7 | 1000GENOMES,COMPLETE_GENOMICS,GMI,ILLUMINA,NHLBI-ESP,SC_SNP,SSMP, | 2 | 0.952294 |
SARDH | chr 9 | 136595439 | 136595440 | rs12236251 | + | G | A/G | intron | 10 | 1000GENOMES,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,SC_SNP,SSMP,TISHKOFF, | 2 | 0.189325 |
SARDH | chr 9 | 136601047 | 136601048 | rs12237736 | + | G | A/G | intron | 9 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,GMI,SC_SNP,SSMP,TISHKOFF, | 2 | 0.171782 |
SARDH | chr 9 | 136558344 | 136558345 | rs12339007 | + | G | A/G | intron | 5 | 1000GENOMES,BUSHMAN,ILLUMINA,SC_SNP,TISHKOFF, | 2 | 0.01514
|
SARDH | chr 9 | 136584827 | 136584828 | rs12341402 | + | T | C/T | intron | 10 | 1000GENOMES,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PJP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.057692 |
SARDH | chr 9 | 136580043 | 136580044 | rs12341880 | + | T | A/T | intron | 4 | 1000GENOMES,SC_SNP,SSMP,TISHKOFF, | 2 | 0.060331 |
SARDH | chr 9 | 136540291 | 136540292 | rs12342230 | + | C | C/T | intron | 4 | 1000GENOMES,ILLUMINA-UK,SC_SNP,TISHKOFF, | 2 | 0.986239 |
SARDH | chr 9 | 136558651 | 136558652 | rs12345442 | + | A | A/G | intron | 4 | 1000GENOMES,BUSHMAN,SC_SNP,TISHKOFF, | 2 | 0.958446 |
SARDH | chr 9 | 136559163 | 136559164 | rs12345624 | + | A | A/G | intron | 7 | 1000GENOMES,BUSHMAN,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SC_SNP,TISHKOFF, | 2 | 0.937563 |
SARDH | chr 9 | 136574583 | 136574584 | rs12350635 | + | C | C/T | intron | 3 | 1000GENOMES,SC_SNP,TISHKOFF, | 2 | 0.988676 |
SARDH | chr 9 | 136603057 | 136603058 | rs12375833 | + | C | C/T | intron | 12 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,SC_SNP,SSMP, | 2 | 0.860933 |
SARDH | chr 9 | 136603202 | 136603203 | rs12376409 | + | A | A/T | intron | 8 | 1000GENOMES,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,GMI,SC_SNP,SSMP,TISHKOFF, | 2 | 0.868259 |
SARDH | chr 9 | 136574479 | 136574480 | rs12685900 | + | C | C/T | intron | 7 | 1000GENOMES,ABI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,SSMP,TISHKOFF, | 2 | 0.940988 |
SARDH | chr 9 | 136576957 | 136576958 | rs12686773 | + | C | C/T | intron | 7 | 1000GENOMES,ABI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,ILLUMINA,SSMP, | 2 | 0.952839 |
SARDH | chr 9 | 136528720 | 136528721 | rs129886 | + | C | C/T | untranslated-3 | 22 | 1000GENOMES,ABI,ACEVAN,AFFY,BCM-HGSC-SUB,BGI,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,HUMANGENOME_JCVI | 5 | 0.006669 |
SARDH | chr 9 | 136529612 | 136529613 | rs129887 | + | C | C/T | intron | 14 | 1000GENOMES,ABI,ACEVAN,BCM_SSAHASNP,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_S | 2 | 0.740165 |
SARDH | chr 9 | 136542867 | 136542868 | rs129889 | + | G | A/G | intron | 18 | 1000GENOMES,ABI,ACEVAN,BGI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PJ | 2 | 0.28191
|
SARDH | chr 9 | 136542353 | 136542354 | rs129890 | + | G | C/G | intron | 18 | 1000GENOMES,ABI,ACEVAN,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGBASE,HUMANGENO | 2 | 0.321687 |
SARDH | chr 9 | 136544257 | 136544258 | rs129891 | + | G | A/G | intron | 14 | 1000GENOMES,ACEVAN,BGI,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA-UK,PERLEGEN,PJP,SC_JCM,SC_SNP,SSM | 2 | 0.514088 |
SARDH | chr 9 | 136546593 | 136546594 | rs129892 | + | T | C/T | intron | 21 | 1000GENOMES,ABI,ACEVAN,AFFY,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGS | 2 | 0.537835 |
SARDH | chr 9 | 136545949 | 136545950 | rs129893 | + | T | C/T | intron | 18 | 1000GENOMES,ABI,ACEVAN,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILL | 2 | 0.51623
|
SARDH | chr 9 | 136546109 | 136546110 | rs129894 | + | A | A/G | intron | 17 | 1000GENOMES,ABI,ACEVAN,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PERLEGE | 2 | 0.482625 |
SARDH | chr 9 | 136545362 | 136545363 | rs129895 | - | A | C/T | intron | 22 | 1000GENOMES,ABI,ACEVAN,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILL | 2 | 0.518491 |
SARDH | chr 9 | 136546923 | 136546924 | rs129896 | + | A | A/G | intron | 15 | 1000GENOMES,ACEVAN,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA-UK,PJP,SC_JCM,SC_S | 2 | 0.484254 |
SARDH | chr 9 | 136547325 | 136547326 | rs129897 | + | A | A/G | intron | 19 | 1000GENOMES,ABI,ACEVAN,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA | 2 | 0.470832 |
SARDH | chr 9 | 136546458 | 136546459 | rs129898 | + | C | C/T | intron | 18 | 1000GENOMES,ABI,ACEVAN,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILL | 2 | 0.485428 |
SARDH | chr 9 | 136546062 | 136546063 | rs129899 | + | C | C/T | intron | 17 | 1000GENOMES,ABI,ACEVAN,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,ILLUMINA-UK | 2 | 0.485139 |
SARDH | chr 9 | 136552004 | 136552005 | rs129900 | + | T | C/T | intron | 18 | 1000GENOMES,ABI,ACEVAN,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA-UK,PERLEGEN,PJ | 2 | 0.472919 |
SARDH | chr 9 | 136552262 | 136552263 | rs129901 | + | A | A/G | intron | 22 | 1000GENOMES,ABI,ACEVAN,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILL | 2 | 0.517681 |
SARDH | chr 9 | 136552207 | 136552208 | rs129902 | + | G | C/G | intron | 10 | 1000GENOMES,ACEVAN,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSMP,WI_SSAHASNP, | 2 | 0.172043 |
SARDH | chr 9 | 136553217 | 136553218 | rs129903 | + | C | C/T | intron | 16 | 1000GENOMES,ABI,ACEVAN,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,SC_JCM,SC_SNP,S | 2 | 0.573724 |
SARDH | chr 9 | 136554166 | 136554167 | rs129904 | + | G | A/G | intron | 18 | 1000GENOMES,ACEVAN,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,KRIBB_YJKI | 2 | 0.41148
|
SARDH | chr 9 | 136554136 | 136554137 | rs129905 | + | T | C/T | intron | 15 | 1000GENOMES,ACEVAN,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,PJP,SC_JCM,SC_SNP,SSMP,TISH | 2 | 0.422897 |
SARDH | chr 9 | 136554180 | 136554181 | rs129906 | + | A | A/G | intron | 15 | 1000GENOMES,ACEVAN,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PJP,SC_JCM,SC_SNP,SSMP, | 2 | 0.57548
|
SARDH | chr 9 | 136555013 | 136555014 | rs129907 | + | G | A/G | intron | 19 | 1000GENOMES,ABI,ACEVAN,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILL | 2 | 0.344231 |
SARDH | chr 9 | 136530129 | 136530130 | rs129922 | + | C | A/C | intron | 20 | 1000GENOMES,ABI,ACEVAN,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,G | 2 | 0.838035 |
SARDH | chr 9 | 136529200 | 136529201 | rs129924 | + | C | C/T | intron | 5 | 1000GENOMES,ACEVAN,AFFY,KRIBB_YJKIM,SSMP, | 2 | 0.966051 |
SARDH | chr 9 | 136529765 | 136529766 | rs129925 | + | C | C/G | intron | 5 | 1000GENOMES,ACEVAN,AFFY,KRIBB_YJKIM,SSMP, | 2 | 0.967696 |
SARDH | chr 9 | 136529613 | 136529614 | rs129927 | + | G | C/G | intron | 15 | 1000GENOMES,ABI,ACEVAN,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,PJP,SC_SNP,SSMP | 2 | 0.373114 |
SARDH | chr 9 | 136530019 | 136530020 | rs129930 | + | T | G/T | intron | 20 | 1000GENOMES,ACEVAN,AFFY,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUM | 2 | 0.681851 |
SARDH | chr 9 | 136532884 | 136532885 | rs129931 | + | T | C/T | intron | 20 | 1000GENOMES,ABI,ACEVAN,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL | 2 | 0.671205 |
SARDH | chr 9 | 136536678 | 136536679 | rs129932 | + | G | A/G | coding-synon | 26 | 1000GENOMES,ACEVAN,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CORNELL,ENS | 2 | 0.536276 |
SARDH | chr 9 | 136538148 | 136538149 | rs129933 | + | G | A/G | intron | 25 | 1000GENOMES,ACEVAN,AFFY,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEM | 2 | 0.69829
|
SARDH | chr 9 | 136538797 | 136538798 | rs129934 | + | C | C/T | intron | 15 | 1000GENOMES,ABI,ACEVAN,BCM-HGSC-SUB,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIB | 2 | 0.735518 |
SARDH | chr 9 | 136538333 | 136538334 | rs129935 | + | C | C/T | intron | 23 | 1000GENOMES,ABI,ACEVAN,AFFY,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,E | 2 | 0.352491 |
SARDH | chr 9 | 136542811 | 136542812 | rs129936 | + | C | C/T | intron | 10 | 1000GENOMES,ABI,ACEVAN,CSHL-HAPMAP,ENSEMBL,ILLUMINA-UK,SC_JCM,SC_SNP,SSMP,TISHKOFF, | 2 | 0.909945 |
SARDH | chr 9 | 136542824 | 136542825 | rs129937 | + | G | A/G | intron | 11 | 1000GENOMES,ABI,ACEVAN,CSHL-HAPMAP,ENSEMBL,ILLUMINA,ILLUMINA-UK,SC_JCM,SC_SNP,SSMP,TISHKOFF, | 2 | 0.092033 |
SARDH | chr 9 | 136542336 | 136542337 | rs129938 | + | T | C/T | intron | 12 | 1000GENOMES,ACEVAN,BUSHMAN,GMI,HGSV,ILLUMINA,ILLUMINA-UK,PJP,SC_JCM,SC_SNP,SSMP,TISHKOFF, | 2 | 0.092864 |
SARDH | chr 9 | 136546291 | 136546292 | rs129939 | + | G | A/G | intron | 15 | 1000GENOMES,ABI,ACEVAN,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PJP,SC_JCM,SSMP | 2 | 0.389931 |
SARDH | chr 9 | 136545422 | 136545423 | rs129940 | + | A | A/G | intron | 7 | 1000GENOMES,ACEVAN,COMPLETE_GENOMICS,ILLUMINA,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.882183 |
SARDH | chr 9 | 136547073 | 136547074 | rs129941 | + | A | A/G | intron | 4 | 1000GENOMES,ACEVAN,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.959217 |
SARDH | chr 9 | 136546270 | 136546271 | rs129942 | + | C | C/T | intron | 4 | 1000GENOMES,ACEVAN,SSMP,TISHKOFF, | 2 | 0.965157 |
SARDH | chr 9 | 136546903 | 136546904 | rs129943 | + | C | C/T | intron | 3 | 1000GENOMES,ACEVAN,ILLUMINA, | 2 | 0.982158 |
SARDH | chr 9 | 136544528 | 136544529 | rs129945 | + | C | C/T | intron | 2 | 1000GENOMES,ACEVAN, | 2 | 0.98586
|
SARDH | chr 9 | 136544664 | 136544665 | rs129946 | + | C | C/T | intron | 5 | 1000GENOMES,ACEVAN,COMPLETE_GENOMICS,ILLUMINA,TISHKOFF, | 2 | 0.981193 |
SARDH | chr 9 | 136546701 | 136546702 | rs129948 | + | A | A/G | intron | 16 | 1000GENOMES,ACEVAN,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP,SC_ | 2 | 0.486524 |
SARDH | chr 9 | 136546966 | 136546967 | rs129951 | + | A | A/G | intron | 16 | 1000GENOMES,ACEVAN,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP,SC_ | 2 | 0.486092 |
SARDH | chr 9 | 136547071 | 136547072 | rs129952 | + | G | A/G | intron | 9 | 1000GENOMES,ABI,ACEVAN,CSHL-HAPMAP,ENSEMBL,ILLUMINA-UK,SC_SNP,TISHKOFF,WI_SSAHASNP, | 2 | 0.032081 |
SARDH | chr 9 | 136544942 | 136544943 | rs129956 | + | T | C/T | intron | 13 | 1000GENOMES,ACEVAN,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,PJP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.15182
|
SARDH | chr 9 | 136545906 | 136545907 | rs129957 | - | C | A/G | intron | 16 | 1000GENOMES,ABI,ACEVAN,BCMHGSC_JDW,BGI,BL,CSHL-HAPMAP,ENSEMBL,HGSV,ILLUMINA,PJP,SC_JCM,SC_SNP,SSMP,T | 2 | 0.340201 |
SARDH | chr 9 | 136552264 | 136552265 | rs129958 | + | G | A/G | intron | 2 | 1000GENOMES,ACEVAN, | 2 | 0.022213 |
SARDH | chr 9 | 136553498 | 136553499 | rs129959 | + | G | A/G | intron | 10 | 1000GENOMES,ABI,ACEVAN,AFFY,CSHL-HAPMAP,ENSEMBL,ILLUMINA,KRIBB_YJKIM,TISHKOFF,WI_SSAHASNP, | 2 | 0.024904 |
SARDH | chr 9 | 136553333 | 136553334 | rs129960 | + | G | A/G | intron | 2 | 1000GENOMES,ACEVAN, | 2 | 0.015456 |
SARDH | chr 9 | 136576703 | 136576704 | rs13285421 | + | G | C/G | intron | 13 | 1000GENOMES,ABI,BCM-HGSC-SUB,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSAHASNP,SSM | 2 | 0.283623 |
SARDH | chr 9 | 136576941 | 136576942 | rs13285775 | + | G | A/G | intron | 10 | 1000GENOMES,ABI,BCM-HGSC-SUB,BL,ENSEMBL,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.28245
|
SARDH | chr 9 | 136537199 | 136537200 | rs13296075 | + | C | C/T | intron | 8 | 1000GENOMES,ABI,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,PJP,SSAHASNP, | 2 | 0.983059 |
SARDH | chr 9 | 136600998 | 136600999 | rs138450441 | + | C | C/G | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.957759 |
SARDH | chr 9 | 136549162 | 136549165 | rs139319241 | + | CT | -/CTC | intron | 2 | 1000GENOMES,LUNTER, | 2 | 0.0427
|
SARDH | chr 9 | 136564955 | 136564957 | rs139487502 | + | AG | -/AG | intron | 3 | 1000GENOMES,LUNTER,SSMP, | 2 | 0.027089 |
SARDH | chr 9 | 136535188 | 136535189 | rs139736499 | + | G | A/G | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.011938 |
SARDH | chr 9 | 136588180 | 136588181 | rs141640772 | + | A | A/G | intron | 3 | 1000GENOMES,ILLUMINA,SSMP, | 2 | 0.988522 |
SARDH | chr 9 | 136599825 | 136599826 | rs143009598 | + | C | C/T | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.987603 |
SARDH | chr 9 | 136583435 | 136583436 | rs143289750 | + | C | C/T | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.988981 |
SARDH | chr 9 | 136564328 | 136564329 | rs145244838 | + | G | G/T | intron | 1 | 1000GENOMES, | 2 | 0.987144 |
SARDH | chr 9 | 136540313 | 136540314 | rs145485454 | + | A | A/T | intron | 1 | 1000GENOMES, | 2 | 0.988522 |
SARDH | chr 9 | 136535746 | 136535747 | rs145913342 | + | G | A/G | coding-synon | 2 | 1000GENOMES,NHLBI-ESP, | 2 | 0.011019 |
SARDH | chr 9 | 136533568 | 136533569 | rs146243146 | + | C | C/T | intron | 1 | 1000GENOMES, | 2 | 0.954086 |
SARDH | chr 9 | 136597581 | 136597582 | rs146886270 | + | T | C/T | missense | 4 | 1000GENOMES,EXOME_CHIP,NHLBI-ESP,TISHKOFF, | 2 | 0.010702 |
SARDH | chr 9 | 136534153 | 136534154 | rs147149105 | + | A | A/T | intron | 3 | 1000GENOMES,BL,SSMP, | 2 | 0.679982 |
SARDH | chr 9 | 136564878 | 136564879 | rs148204556 | + | C | C/G | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.987603 |
SARDH | chr 9 | 136566575 | 136566576 | rs148519627 | + | C | C/T | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.988522 |
SARDH | chr 9 | 136537893 | 136537894 | rs148878363 | + | A | A/G | intron | 2 | 1000GENOMES,BL, | 2 | 0.987603 |
SARDH | chr 9 | 136567828 | 136567839 | rs150411519 | + | GG | -/GGC | intron | 2 | 1000GENOMES,LUNTER, | 2 | 0.313131 |
SARDH | chr 9 | 136597040 | 136597041 | rs150620582 | + | T | -/T | intron | 3 | 1000GENOMES,LUNTER,TISHKOFF, | 2 | 0.029385 |
SARDH | chr 9 | 136590812 | 136590812 | rs150689824 | + | - | -/AAA | intron | 4 | 1000GENOMES,BILGI_BIOE,BL,LUNTER, | 2 | 0.721304 |
SARDH | chr 9 | 136530327 | 136530335 | rs151109645 | + | AA | -/AAC | intron | 3 | 1000GENOMES,LUNTER,TISHKOFF, | 2 | 0.026171 |
SARDH | chr 9 | 136551549 | 136551550 | rs1548362 | - | A | C/T | intron | 14 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,SC_JCM,SC_SNP,SSMP,TISHKOF | 2 | 0.285165 |
SARDH | chr 9 | 136551543 | 136551544 | rs1548363 | - | C | A/G | intron | 18 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP,SC_JCM | 2 | 0.501139 |
SARDH | chr 9 | 136583007 | 136583008 | rs1557648 | - | A | C/T | intron | 14 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA,PERLEGEN,PJP,SC_SNP,SSMP,TISH | 2 | 0.225605 |
SARDH | chr 9 | 136556246 | 136556247 | rs17150844 | + | A | A/C | intron | 5 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA-UK,PERLEGEN,TISHKOFF, | 2 | 0.940919 |
SARDH | chr 9 | 136564289 | 136564290 | rs184038696 | + | G | A/G | intron | 1 | 1000GENOMES, | 2 | 0.012856 |
SARDH | chr 9 | 136534344 | 136534345 | rs184584129 | + | T | C/T | intron | 1 | 1000GENOMES, | 2 | 0.056474 |
SARDH | chr 9 | 136591521 | 136591522 | rs185377551 | + | G | A/G | intron | 1 | 1000GENOMES, | 2 | 0.103765 |
SARDH | chr 9 | 136547828 | 136547829 | rs188900693 | + | C | A/C | intron | 1 | 1000GENOMES, | 2 | 0.013774 |
SARDH | chr 9 | 136560496 | 136560497 | rs188966792 | + | G | A/G | intron | 1 | 1000GENOMES, | 2 | 0.017447 |
SARDH | chr 9 | 136585093 | 136585094 | rs189080901 | + | G | A/G | intron | 1 | 1000GENOMES, | 2 | 0.013315 |
SARDH | chr 9 | 136533552 | 136533553 | rs190759706 | + | C | C/T | intron | 1 | 1000GENOMES, | 2 | 0.863177 |
SARDH | chr 9 | 136554304 | 136554305 | rs191883702 | + | C | C/G | intron | 1 | 1000GENOMES, | 2 | 0.988981 |
SARDH | chr 9 | 136547956 | 136547957 | rs192189487 | + | C | A/C | intron | 1 | 1000GENOMES, | 2 | 0.018825 |
SARDH | chr 9 | 136533598 | 136533599 | rs192600797 | + | G | A/G | intron | 1 | 1000GENOMES, | 2 | 0.065657 |
SARDH | chr 9 | 136599486 | 136599490 | rs199864550 | + | TC | -/TCA | intron | 1 | 1000GENOMES, | 2 | 0.023416 |
SARDH | chr 9 | 136591515 | 136591515 | rs199874399 | + | - | -/GT | intron | 1 | 1000GENOMES, | 2 | 0.978421 |
SARDH | chr 9 | 136579298 | 136579298 | rs200126729 | + | - | -/A | intron | 3 | 1000GENOMES,LUNTER,TISHKOFF, | 2 | 0.950413 |
SARDH | chr 9 | 136548106 | 136548107 | rs200567947 | + | C | -/C | intron | 1 | 1000GENOMES, | 2 | 0.011478 |
SARDH | chr 9 | 136530226 | 136530227 | rs200665833 | + | T | -/T | intron | 1 | 1000GENOMES, | 2 | 0.023416 |
SARDH | chr 9 | 136599653 | 136599653 | rs200989623 | + | - | -/A | intron | 1 | 1000GENOMES, | 2 | 0.966024 |
SARDH | chr 9 | 136532314 | 136532314 | rs201062562 | + | - | -/G | intron | 1 | 1000GENOMES, | 2 | 0.612948 |
SARDH | chr 9 | 136533397 | 136533407 | rs201431408 | + | TC | -/TCC | intron | 2 | 1000GENOMES,LUNTER, | 2 | 0.571625 |
SARDH | chr 9 | 136581892 | 136581892 | rs201469712 | + | - | -/C/G | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.81405
|
SARDH | chr 9 | 136585640 | 136585641 | rs2027962 | - | C | G/T | intron | 16 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP, | 2 | 0.723949 |
SARDH | chr 9 | 136584195 | 136584196 | rs2027963 | - | T | A/C | intron | 22 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENO | 2 | 0.458293 |
SARDH | chr 9 | 136573411 | 136573412 | rs2073815 | - | G | C/T | coding-synon | 28 | 1000GENOMES,ABI,APPLERA_GI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,ENS | 2 | 0.538768 |
SARDH | chr 9 | 136559833 | 136559834 | rs2073816 | - | G | C/T | intron | 19 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA-U | 2 | 0.487591 |
SARDH | chr 9 | 136559459 | 136559460 | rs2073817 | - | C | A/G | missense | 19 | 1000GENOMES,APPLERA_GI,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,EXOME_CHIP,GMI,HGBASE,ILLUMI | 2 | 0.36085
|
SARDH | chr 9 | 136536151 | 136536152 | rs2073834 | - | C | A/G | intron | 20 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGBASE | 2 | 0.582307 |
SARDH | chr 9 | 136532182 | 136532183 | rs2073835 | - | G | C/T | intron | 12 | 1000GENOMES,BGI,BL,GMI,HGBASE,ILLUMINA,KRIBB_YJKIM,PJP,SC_SNP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.684627 |
SARDH | chr 9 | 136532133 | 136532134 | rs2073836 | - | A | A/T | intron | 13 | 1000GENOMES,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGBASE,ILLUMINA-UK,PJP,SC_SNP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.388041 |
SARDH | chr 9 | 136599549 | 136599550 | rs2073906 | + | C | C/T | intron | 11 | 1000GENOMES,BCMHGSC_JDW,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,SC_SNP,SSAHASNP,SSMP,TSC-CSHL,YUSUK | 2 | 0.750457 |
SARDH | chr 9 | 136599585 | 136599586 | rs2073907 | + | T | C/T | intron | 4 | 1000GENOMES,GMI,SSMP,YUSUKE, | 2 | 0.039486 |
SARDH | chr 9 | 136599653 | 136599654 | rs2073908 | + | G | A/G | intron | 3 | 1000GENOMES,GMI,YUSUKE, | 2 | 0.033517 |
SARDH | chr 9 | 136592013 | 136592014 | rs2251217 | + | T | G/T | intron | 23 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HG | 2 | 0.836329 |
SARDH | chr 9 | 136592498 | 136592499 | rs2254109 | + | A | A/G | intron | 21 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,H | 2 | 0.137585 |
SARDH | chr 9 | 136592341 | 136592342 | rs2283125 | + | C | A/C | intron | 17 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJ | 2 | 0.278071 |
SARDH | chr 9 | 136599545 | 136599546 | rs2318818 | + | T | C/T | intron | 8 | 1000GENOMES,BCMHGSC_JDW,DEVINE_LAB,ENSEMBL,GMI,HUMANGENOME_JCVI,SSMP,TSC-CSHL, | 2 | 0.237203 |
SARDH | chr 9 | 136596048 | 136596049 | rs2427978 | - | T | A/T | intron | 18 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,G | 2 | 0.172131 |
SARDH | chr 9 | 136581720 | 136581721 | rs2427979 | - | A | C/T | intron | 15 | 1000GENOMES,BCM-HGSC-SUB,BGI,BL,BUSHMAN,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SC_JCM,SC_SNP,S | 2 | 0.88238
|
SARDH | chr 9 | 136581639 | 136581640 | rs2427980 | - | C | G/T | intron | 17 | 1000GENOMES,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_J | 2 | 0.184932 |
SARDH | chr 9 | 136581418 | 136581419 | rs2427981 | - | C | G/T | intron | 23 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HG | 3 | 0.466339 |
SARDH | chr 9 | 136580545 | 136580546 | rs2427982 | - | C | C/G | intron | 19 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_J | 2 | 0.888281 |
SARDH | chr 9 | 136580440 | 136580441 | rs2427983 | - | G | C/T | intron | 15 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,PJP,SC_JCM,SC_SNP,SSM | 2 | 0.721357 |
SARDH | chr 9 | 136580233 | 136580234 | rs2427984 | - | C | C/G | intron | 13 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,ENSEMBL,GMI,HUMANGENOME_JCVI,SC_JCM,SC_SNP,SSMP,TISHKOFF | 2 | 0.311632 |
SARDH | chr 9 | 136577213 | 136577214 | rs2427986 | - | T | A/G | intron | 21 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,H | 2 | 0.031818 |
SARDH | chr 9 | 136594863 | 136594864 | rs2427988 | - | A | C/T | intron | 22 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,H | 2 | 0.801838 |
SARDH | chr 9 | 136569060 | 136569061 | rs2427989 | - | C | A/G | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENO | 2 | 0.858529 |
SARDH | chr 9 | 136568876 | 136568877 | rs2427990 | - | T | A/G | intron | 15 | 1000GENOMES,ABI,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,PJP,SC_JCM,SC_SNP,SI_E | 2 | 0.119178 |
SARDH | chr 9 | 136568865 | 136568866 | rs2427991 | - | T | A/G | intron | 16 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA, | 2 | 0.105528 |
SARDH | chr 9 | 136568840 | 136568841 | rs2427992 | - | T | A/G | intron | 16 | 1000GENOMES,ABI,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,P | 2 | 0.1476
|
SARDH | chr 9 | 136568311 | 136568312 | rs2427993 | - | C | A/G | intron | 21 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,E | 2 | 0.924863 |
SARDH | chr 9 | 136567130 | 136567131 | rs2427994 | - | T | A/G | intron | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,H | 2 | 0.157006 |
SARDH | chr 9 | 136566958 | 136566959 | rs2427995 | - | A | G/T | intron | 23 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAP | 2 | 0.868298 |
SARDH | chr 9 | 136594307 | 136594308 | rs2427996 | - | C | A/G | intron | 20 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGEN | 2 | 0.834532 |
SARDH | chr 9 | 136563143 | 136563144 | rs2427997 | - | G | C/T | intron | 7 | 1000GENOMES,BCM_SSAHASNP,BL,ENSEMBL,GMI,SC_JCM,SC_SNP, | 2 | 0.553522 |
SARDH | chr 9 | 136561566 | 136561567 | rs2427998 | - | G | A/C | intron | 21 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HG | 2 | 0.845979 |
SARDH | chr 9 | 136588496 | 136588497 | rs2427999 | - | A | A/T | intron | 19 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_J | 2 | 0.787491 |
SARDH | chr 9 | 136601187 | 136601188 | rs2428102 | + | A | A/T | intron | 18 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_J | 2 | 0.11258
|
SARDH | chr 9 | 136591089 | 136591090 | rs2428103 | + | T | C/T | intron | 22 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,E | 2 | 0.8528
|
SARDH | chr 9 | 136574243 | 136574244 | rs2488550 | - | A | C/T | intron | 22 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP, | 2 | 0.979664 |
SARDH | chr 9 | 136599314 | 136599315 | rs2488553 | + | G | A/G | untranslated-5 | 19 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANG | 2 | 0.644094 |
SARDH | chr 9 | 136548023 | 136548024 | rs2502734 | + | T | C/T | intron | 16 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKI | 2 | 0.541189 |
SARDH | chr 9 | 136557828 | 136557829 | rs2502736 | + | C | A/C | intron | 17 | 1000GENOMES,ABI,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP,SC_JCM | 2 | 0.521204 |
SARDH | chr 9 | 136560436 | 136560437 | rs2502737 | + | C | A/C | intron | 8 | 1000GENOMES,BCM-HGSC-SUB,COMPLETE_GENOMICS,GMI,HGSV,SC_JCM,SC_SNP,SSMP, | 2 | 0.030734 |
SARDH | chr 9 | 136560770 | 136560771 | rs2502738 | + | G | G/T | intron | 16 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,PJP,SC_JCM,S | 2 | 0.575023 |
SARDH | chr 9 | 136561302 | 136561303 | rs2502739 | + | A | A/T | intron | 23 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGS | 2 | 0.163147 |
SARDH | chr 9 | 136561366 | 136561367 | rs2502740 | + | G | A/G | coding-synon | 18 | 1000GENOMES,APPLERA_GI,BCMHGSC_JDW,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,KRI | 2 | 0.25616
|
SARDH | chr 9 | 136563039 | 136563040 | rs2502741 | + | A | A/G | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSE | 2 | 0.546845 |
SARDH | chr 9 | 136563110 | 136563111 | rs2502742 | + | G | G/T | intron | 17 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,PJP,S | 2 | 0.554392 |
SARDH | chr 9 | 136564192 | 136564193 | rs2502743 | + | C | C/G | intron | 18 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENO | 2 | 0.14749
|
SARDH | chr 9 | 136564253 | 136564254 | rs2502744 | + | A | A/G | intron | 16 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SC_JC | 2 | 0.553016 |
SARDH | chr 9 | 136569427 | 136569428 | rs2502745 | + | C | C/G | intron | 18 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_ | 2 | 0.411422 |
SARDH | chr 9 | 136569906 | 136569907 | rs2502746 | + | G | A/G | intron | 17 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,PERLEGE | 3 | 0.544813 |
SARDH | chr 9 | 136570003 | 136570004 | rs2502747 | + | G | A/G | intron | 13 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,ENSEMBL,GMI,HGSV,PJP,SC_JCM,SC_SNP,SSAHASNP,SSMP,WI_SSAHASNP, | 2 | 0.531564 |
SARDH | chr 9 | 136586953 | 136586954 | rs2502757 | + | C | C/T | intron | 18 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BGI,BL,BUSHMAN,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,P | 2 | 0.724784 |
SARDH | chr 9 | 136588756 | 136588757 | rs2502758 | + | C | A/C | intron | 13 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BL,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SC_JCM,SC_SNP,SSMP,TIS | 2 | 0.294414 |
SARDH | chr 9 | 136597882 | 136597883 | rs2502759 | + | A | A/G | intron | 19 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JC | 2 | 0.11434
|
SARDH | chr 9 | 136600139 | 136600140 | rs2502761 | + | T | G/T | intron | 21 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,H | 2 | 0.916249 |
SARDH | chr 9 | 136590368 | 136590369 | rs2510234 | + | T | C/T | intron | 18 | 1000GENOMES,ABI,BCM_SSAHASNP,BGI,BUSHMAN,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERL | 2 | 0.291882 |
SARDH | chr 9 | 136590377 | 136590378 | rs2510235 | + | T | C/T | intron | 17 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BUSHMAN,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,SC_ | 2 | 0.315627 |
SARDH | chr 9 | 136584498 | 136584499 | rs2510240 | + | T | C/T | intron | 19 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENO | 2 | 0.57433
|
SARDH | chr 9 | 136565858 | 136565859 | rs2510241 | + | G | A/G | intron | 11 | BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SC_JCM,SC_SNP,TISHKOFF, | 2 | 0.6
|
SARDH | chr 9 | 136571088 | 136571089 | rs2510245 | - | G | C/T | intron | 24 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,E | 2 | 0.501198 |
SARDH | chr 9 | 136570004 | 136570005 | rs2510247 | - | T | A/G | intron | 17 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA,PJP,SC_JCM,SC_SNP,SSAHA | 2 | 0.127514 |
SARDH | chr 9 | 136569973 | 136569974 | rs2510248 | - | G | C/T | intron | 16 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP, | 2 | 0.584018 |
SARDH | chr 9 | 136599656 | 136599657 | rs2510263 | - | A | C/T | intron | 18 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,H | 2 | 0.853102 |
SARDH | chr 9 | 136554819 | 136554820 | rs2519070 | - | C | A/G | intron | 16 | 1000GENOMES,ABI,AFFY,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,ILLUMINA,PJP,SC_JCM,SC_SN | 2 | 0.410946 |
SARDH | chr 9 | 136552503 | 136552504 | rs2519071 | - | A | C/T | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA-UK,PJP,SC_JCM,SC_SNP, | 2 | 0.52168
|
SARDH | chr 9 | 136550816 | 136550817 | rs2519072 | - | A | C/T | intron | 17 | 1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,ILLUMINA- | 2 | 0.540158 |
SARDH | chr 9 | 136540396 | 136540397 | rs2519117 | - | A | G/T | intron | 14 | 1000GENOMES,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_JCM,SC_SNP,SSAHAS | 2 | 0.626253 |
SARDH | chr 9 | 136538359 | 136538360 | rs2519119 | - | A | C/T | intron | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,H | 2 | 0.647246 |
SARDH | chr 9 | 136550997 | 136550998 | rs2519120 | - | C | A/G | intron | 15 | 1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA-UK,PJP,SC | 2 | 0.485637 |
SARDH | chr 9 | 136537200 | 136537201 | rs2519121 | - | A | C/T | intron | 16 | 1000GENOMES,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,ILLUMINA-UK,P | 2 | 0.632802 |
SARDH | chr 9 | 136537169 | 136537170 | rs2519122 | - | C | C/G | intron | 20 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEM | 2 | 0.632923 |
SARDH | chr 9 | 136536792 | 136536793 | rs2519123 | - | C | C/G | coding-synon | 21 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CORNELL,ENSEMBL,GMI,HGSV, | 2 | 0.568133 |
SARDH | chr 9 | 136536035 | 136536036 | rs2519124 | - | A | C/T | intron | 18 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMA | 2 | 0.634747 |
SARDH | chr 9 | 136535316 | 136535317 | rs2519125 | - | A | C/T | intron | 18 | 1000GENOMES,BCM-HGSC-SUB,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMA | 2 | 0.650388 |
SARDH | chr 9 | 136550669 | 136550670 | rs2519126 | - | C | A/G | intron | 16 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PERL | 2 | 0.34963
|
SARDH | chr 9 | 136532475 | 136532476 | rs2519127 | - | T | A/G | intron | 12 | 1000GENOMES,ABI,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SC_JCM,SC_SNP,SSMP,TISHKOFF, | 2 | 0.657967 |
SARDH | chr 9 | 136548339 | 136548340 | rs2519129 | - | G | C/T | intron | 16 | 1000GENOMES,ABI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,HGSV,ILLUMINA-UK,PJP,SC_JCM,SC_SNP, | 2 | 0.507763 |
SARDH | chr 9 | 136548255 | 136548256 | rs2519130 | - | C | A/G | intron | 17 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA-UK,PJP,SC_JCM,SC_SNP, | 2 | 0.376165 |
SARDH | chr 9 | 136543775 | 136543776 | rs2519131 | - | C | C/G | intron | 14 | 1000GENOMES,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP,SC_JCM,SC_SNP | 2 | 0.509813 |
SARDH | chr 9 | 136557605 | 136557606 | rs2797820 | - | C | C/G | intron | 18 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,HGSV,ILLUMINA- | 2 | 0.473469 |
SARDH | chr 9 | 136575599 | 136575600 | rs2797821 | - | G | C/T | intron | 19 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,H | 2 | 0.393719 |
SARDH | chr 9 | 136552647 | 136552648 | rs2797823 | - | T | A/G | intron | 17 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,PJP,SC_JCM | 2 | 0.577555 |
SARDH | chr 9 | 136547194 | 136547195 | rs2797829 | - | T | A/G | intron | 17 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA-UK,PJP,SC | 2 | 0.506369 |
SARDH | chr 9 | 136545781 | 136545782 | rs2797830 | - | C | A/G | intron | 18 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA-UK,P | 2 | 0.517733 |
SARDH | chr 9 | 136543939 | 136543940 | rs2797831 | - | C | A/G | intron | 16 | 1000GENOMES,AFFY,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,KRIBB_YJKIM, | 2 | 0.534023 |
SARDH | chr 9 | 136543704 | 136543705 | rs2797832 | - | T | A/G | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA-UK,PJP,SC_JCM,SC_SNP, | 2 | 0.470991 |
SARDH | chr 9 | 136538365 | 136538366 | rs2797834 | - | G | C/T | intron | 15 | 1000GENOMES,ABI,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,SC_JC | 2 | 0.686615 |
SARDH | chr 9 | 136538262 | 136538263 | rs2797835 | - | G | C/T | intron | 22 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,H | 2 | 0.360614 |
SARDH | chr 9 | 136538223 | 136538224 | rs2797836 | - | T | A/G | intron | 21 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,H | 2 | 0.34611
|
SARDH | chr 9 | 136538198 | 136538199 | rs2797837 | - | A | G/T | intron | 22 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGEN | 2 | 0.660014 |
SARDH | chr 9 | 136538051 | 136538052 | rs2797838 | - | T | A/G | intron | 23 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL, | 2 | 0.335003 |
SARDH | chr 9 | 136537382 | 136537383 | rs2797839 | - | C | A/G | intron | 20 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEM | 2 | 0.633166 |
SARDH | chr 9 | 136536632 | 136536633 | rs2797840 | - | G | C/T | intron | 21 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JC | 2 | 0.372627 |
SARDH | chr 9 | 136536258 | 136536259 | rs2797841 | - | A | A/T | intron | 19 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,H | 2 | 0.640091 |
SARDH | chr 9 | 136536159 | 136536160 | rs2797842 | - | G | A/C | intron | 15 | 1000GENOMES,ABI,BGI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,S | 2 | 0.328767 |
SARDH | chr 9 | 136536126 | 136536127 | rs2797843 | - | T | A/G | intron | 17 | 1000GENOMES,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA- | 2 | 0.348519 |
SARDH | chr 9 | 136535587 | 136535588 | rs2797844 | - | T | A/G | intron | 22 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEM | 2 | 0.352349 |
SARDH | chr 9 | 136535420 | 136535421 | rs2797845 | - | G | C/T | intron | 13 | BCM_SSAHASNP,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_JCM,SC_SNP,SSAHA | 2 | 0.083333 |
SARDH | chr 9 | 136535404 | 136535405 | rs2797846 | - | T | A/G | intron | 17 | 1000GENOMES,BCM-HGSC-SUB,BCM_SSAHASNP,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_ | 2 | 0.386654 |
SARDH | chr 9 | 136582394 | 136582395 | rs28395318 | + | A | A/G | intron | 11 | 1000GENOMES,BCMHGSC_JDW,BGI,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,GMI,SSAHASNP,SSMP,TISHKOFF | 2 | 0.767715 |
SARDH | chr 9 | 136561054 | 136561055 | rs28472298 | + | G | C/G | intron | 4 | 1000GENOMES,BUSHMAN,SSAHASNP,TISHKOFF, | 2 | 0.013297 |
SARDH | chr 9 | 136575955 | 136575956 | rs2849750 | - | G | C/T | intron | 10 | 1000GENOMES,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,SC_JCM,SSMP,TISHKOFF, | 2 | 0.806849 |
SARDH | chr 9 | 136590667 | 136590668 | rs28498131 | + | G | A/G | intron | 2 | 1000GENOMES,SSAHASNP, | 2 | 0.029617 |
SARDH | chr 9 | 136591515 | 136591516 | rs28503516 | + | A | A/G | intron | 4 | 1000GENOMES,BCM-HGSC-SUB,GMI,SSAHASNP, | 2 | 0.583104 |
SARDH | chr 9 | 136578992 | 136578993 | rs28526121 | + | A | A/G | intron | 3 | 1000GENOMES,ILLUMINA-UK,SSAHASNP, | 2 | 0.952752 |
SARDH | chr 9 | 136581776 | 136581777 | rs28549806 | + | G | A/G | intron | 8 | 1000GENOMES,BGI,BUSHMAN,COMPLETE_GENOMICS,GMI,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.237529 |
SARDH | chr 9 | 136536638 | 136536639 | rs28604501 | + | T | C/T | intron | 5 | 1000GENOMES,ILLUMINA,NHLBI-ESP,SSAHASNP,TISHKOFF, | 2 | 0.016115 |
SARDH | chr 9 | 136588873 | 136588874 | rs28610198 | + | G | A/G | intron | 2 | 1000GENOMES,SSAHASNP, | 2 | 0.025253 |
SARDH | chr 9 | 136538119 | 136538120 | rs28645102 | + | C | A/C | intron | 5 | 1000GENOMES,HGSV,ILLUMINA-UK,SSAHASNP,TISHKOFF, | 2 | 0.013303 |
SARDH | chr 9 | 136535139 | 136535140 | rs28754398 | + | G | A/G | intron | 4 | 1000GENOMES,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.019164 |
SARDH | chr 9 | 136589191 | 136589192 | rs28799017 | + | A | A/G | intron | 3 | 1000GENOMES,ILLUMINA-UK,SSAHASNP, | 2 | 0.959633 |
SARDH | chr 9 | 136600772 | 136600773 | rs2905214 | + | C | C/T | intron | 15 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BL,BUSHMAN,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,IL | 2 | 0.747941 |
SARDH | chr 9 | 136560660 | 136560661 | rs3003587 | + | C | C/T | intron | 21 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,H | 2 | 0.120472 |
SARDH | chr 9 | 136547779 | 136547780 | rs3024257 | + | G | A/G | intron | 2 | 1000GENOMES,ACEVAN, | 2 | 0.020202 |
SARDH | chr 9 | 136544731 | 136544732 | rs3025444 | + | G | A/G | intron | 5 | 1000GENOMES,ACEVAN,COMPLETE_GENOMICS,ILLUMINA,TISHKOFF, | 2 | 0.019798 |
SARDH | chr 9 | 136547601 | 136547602 | rs3025448 | + | C | A/C | intron | 10 | 1000GENOMES,ABI,ACEVAN,BCM-HGSC-SUB,COMPLETE_GENOMICS,ENSEMBL,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM, | 2 | 0.018905 |
SARDH | chr 9 | 136554255 | 136554256 | rs3025452 | + | G | A/G | intron | 3 | 1000GENOMES,ACEVAN,SSMP, | 2 | 0.026703 |
SARDH | chr 9 | 136592841 | 136592841 | rs3216303 | + | - | -/C | intron | 10 | 1000GENOMES,ABI,BL,GMI,HUMANGENOME_JCVI,LUNTER,PJP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.720898 |
SARDH | chr 9 | 136538309 | 136538310 | rs34508494 | + | A | A/G | intron | 13 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,PJP,SSMP,TI | 2 | 0.664077 |
SARDH | chr 9 | 136595756 | 136595757 | rs34566194 | + | G | -/G | intron | 11 | 1000GENOMES,ABI,BILGI_BIOE,DEVINE_LAB,GMI,HGSV,HUMANGENOME_JCVI,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 0.259158 |
SARDH | chr 9 | 136561447 | 136561448 | rs35013479 | + | G | A/G | coding-synon | 4 | 1000GENOMES,APPLERA_GI,ILLUMINA,NHLBI-ESP, | 2 | 0.014857 |
SARDH | chr 9 | 136570680 | 136570680 | rs35085391 | + | - | -/C | intron | 7 | 1000GENOMES,ABI,BILGI_BIOE,BL,BUSHMAN,GMI,LUNTER, | 2 | 0.113303 |
SARDH | chr 9 | 136542404 | 136542404 | rs35160465 | + | - | -/G | intron | 7 | 1000GENOMES,ABI,BILGI_BIOE,GMI,LUNTER,SSMP,TISHKOFF, | 2 | 0.943067 |
SARDH | chr 9 | 136582481 | 136582482 | rs35218200 | + | C | A/C | missense | 9 | 1000GENOMES,APPLERA_GI,CLINSEQ_SNP,EXOME_CHIP,ILLUMINA,NHLBI-ESP,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.015637 |
SARDH | chr 9 | 136595252 | 136595253 | rs35457000 | + | C | C/T | coding-synon | 5 | 1000GENOMES,APPLERA_GI,ILLUMINA,NHLBI-ESP,TISHKOFF, | 2 | 0.984715 |
SARDH | chr 9 | 136556340 | 136556342 | rs35483234 | + | CA | -/CA | intron | 3 | 1000GENOMES,DEVINE_LAB,LUNTER, | 2 | 0.062902 |
SARDH | chr 9 | 136599231 | 136599232 | rs35559818 | + | C | A/C | missense | 8 | 1000GENOMES,APPLERA_GI,BUSHMAN,EXOME_CHIP,ILLUMINA,NHLBI-ESP,PERLEGEN,TISHKOFF, | 2 | 0.017533 |
SARDH | chr 9 | 136561199 | 136561200 | rs35905090 | + | G | -/G | intron | 12 | 1000GENOMES,ABI,BILGI_BIOE,BL,BUSHMAN,DEVINE_LAB,GMI,HGSV,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 0.906422 |
SARDH | chr 9 | 136598283 | 136598284 | rs3780802 | - | A | C/T | intron | 3 | 1000GENOMES,SSMP,YUSUKE, | 2 | 0.03621
|
SARDH | chr 9 | 136598127 | 136598128 | rs3780804 | - | T | A/C | intron | 13 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,T | 2 | 0.818182 |
SARDH | chr 9 | 136597978 | 136597979 | rs3824568 | + | T | C/T | intron | 6 | 1000GENOMES,GMI,ILLUMINA,KRIBB_YJKIM,SSMP,YUSUKE, | 2 | 0.035176 |
SARDH | chr 9 | 136535899 | 136535900 | rs45517631 | + | G | A/G | intron | 5 | 1000GENOMES,CLINSEQ_SNP,ILLUMINA,NHLBI-ESP,SI_EXO, | 2 | 0.020021 |
SARDH | chr 9 | 136577847 | 136577848 | rs45581441 | + | C | C/T | intron | 7 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,ILLUMINA,NHLBI-ESP,SI_EXO,SSMP, | 2 | 0.957379 |
SARDH | chr 9 | 136569999 | 136570000 | rs45593937 | + | G | A/G | intron | 3 | 1000GENOMES,SI_EXO,TISHKOFF, | 2 | 0.016529 |
SARDH | chr 9 | 136552361 | 136552362 | rs4744533 | + | C | C/T | intron | 17 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,KRIBB_ | 2 | 0.669707 |
SARDH | chr 9 | 136562164 | 136562165 | rs4744534 | + | G | A/G | intron | 9 | 1000GENOMES,BL,COMPLETE_GENOMICS,GMI,HGSV,PJP,SC_SNP,SSMP,WI_SSAHASNP, | 2 | 0.278899 |
SARDH | chr 9 | 136574471 | 136574472 | rs488013 | - | C | G/T | intron | 21 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEM | 2 | 0.37766
|
SARDH | chr 9 | 136574286 | 136574287 | rs489851 | - | C | A/G | intron | 19 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEM | 2 | 0.621818 |
SARDH | chr 9 | 136599867 | 136599868 | rs491072 | + | T | C/T | intron | 17 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,PJP,SC_JCM,SS | 2 | 0.25892
|
SARDH | chr 9 | 136600200 | 136600201 | rs493901 | + | T | C/T | intron | 19 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA | 2 | 0.456793 |
SARDH | chr 9 | 136573647 | 136573648 | rs495464 | - | A | A/T | intron | 16 | 1000GENOMES,ABI,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_J | 2 | 0.450783 |
SARDH | chr 9 | 136600587 | 136600588 | rs497622 | + | T | C/T | intron | 19 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,E | 2 | 0.435558 |
SARDH | chr 9 | 136533367 | 136533368 | rs4979627 | + | A | A/G | intron | 11 | 1000GENOMES,BCM-HGSC-SUB,BGI,COMPLETE_GENOMICS,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,SSMP,TISHKOFF,W | 2 | 0.73925
|
SARDH | chr 9 | 136587211 | 136587212 | rs4979628 | - | T | A/G | intron | 14 | 1000GENOMES,ABI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_SNP,SSMP,T | 2 | 0.72516
|
SARDH | chr 9 | 136590214 | 136590215 | rs4979630 | - | G | C/T | intron | 16 | 1000GENOMES,ABI,AFFY,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,KRIBB_YJKIM,PERLEGEN,PJP | 2 | 0.730644 |
SARDH | chr 9 | 136572749 | 136572750 | rs4979631 | - | C | A/G | intron | 17 | 1000GENOMES,ABI,AFFY,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA,KRIBB_YJKIM, | 2 | 0.385337 |
SARDH | chr 9 | 136572020 | 136572021 | rs4979632 | - | G | C/T | intron | 10 | 1000GENOMES,AFFY,COMPLETE_GENOMICS,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,WI_SSAHASNP, | 2 | 0.790805 |
SARDH | chr 9 | 136571885 | 136571886 | rs4979633 | - | C | A/G | intron | 13 | 1000GENOMES,ABI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,PERLEGEN,PJP,SSMP,TISHKOFF,WI_ | 3 | 0.262979 |
SARDH | chr 9 | 136577093 | 136577094 | rs511293 | - | G | C/T | intron | 10 | 1000GENOMES,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,SC_JCM,SSMP, | 2 | 0.819659 |
SARDH | chr 9 | 136579593 | 136579594 | rs522673 | - | C | A/G | intron | 13 | 1000GENOMES,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,SC_JCM,SC_SNP,SSMP,TISHKOFF,W | 2 | 0.226691 |
SARDH | chr 9 | 136579588 | 136579589 | rs522676 | - | G | C/T | intron | 21 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENO | 2 | 0.289928 |
SARDH | chr 9 | 136579297 | 136579298 | rs525412 | - | G | C/T | intron | 9 | 1000GENOMES,BGI,BUSHMAN,COMPLETE_GENOMICS,GMI,PJP,SC_JCM,SC_SNP,SSMP, | 2 | 0.819139 |
SARDH | chr 9 | 136576545 | 136576546 | rs537067 | - | A | C/T | intron | 11 | 1000GENOMES,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,PJP,SC_JCM,SC_SNP,SSMP, | 2 | 0.165981 |
SARDH | chr 9 | 136601673 | 136601674 | rs55638921 | + | T | C/T | intron | 3 | 1000GENOMES,HGSV,TISHKOFF, | 2 | 0.040863 |
SARDH | chr 9 | 136573782 | 136573783 | rs56139637 | + | G | A/G | intron | 3 | 1000GENOMES,HGSV,ILLUMINA-UK, | 2 | 0.041284 |
SARDH | chr 9 | 136574327 | 136574328 | rs56178401 | + | G | A/G | intron | 4 | 1000GENOMES,HGSV,ILLUMINA,ILLUMINA-UK, | 2 | 0.040826 |
SARDH | chr 9 | 136560632 | 136560633 | rs56355444 | + | C | C/T | intron | 8 | 1000GENOMES,BGI,BL,GMI,HGSV,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.707019 |
SARDH | chr 9 | 136601009 | 136601009 | rs57356748 | + | - | -/ACA | cds-indel | 9 | 1000GENOMES,BCMHGSC_JDW,BILGI_BIOE,BUSHMAN,GMI,HGSV,HUMANGENOME_JCVI,LUNTER,TISHKOFF, | 2 | 0.16132
|
SARDH | chr 9 | 136599145 | 136599146 | rs573904 | + | C | C/T | coding-synon | 16 | 1000GENOMES,BCM-HGSC-SUB,BGI,BL,CLINSEQ_SNP,CORNELL,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,NHLBI- | 2 | 0.776438 |
SARDH | chr 9 | 136552987 | 136552988 | rs57514304 | + | T | C/T | intron | 5 | 1000GENOMES,GMI,HGSV,PJP,SSMP, | 2 | 0.038294 |
SARDH | chr 9 | 136534455 | 136534456 | rs57660207 | + | G | A/G | intron | 6 | 1000GENOMES,BGI,BL,GMI,HGSV,SSMP, | 2 | 0.623028 |
SARDH | chr 9 | 136599762 | 136599763 | rs579232 | + | T | G/T | intron | 17 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_J | 2 | 0.620219 |
SARDH | chr 9 | 136599768 | 136599769 | rs579236 | + | G | A/G | intron | 15 | 1000GENOMES,BCMHGSC_JDW,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,SC_JCM,SC | 2 | 0.399087 |
SARDH | chr 9 | 136569338 | 136569339 | rs58165558 | + | G | C/G | intron | 2 | 1000GENOMES,HGSV, | 2 | 0.016115 |
SARDH | chr 9 | 136569969 | 136569970 | rs58180720 | + | A | A/G | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,HGSV,TISHKOFF, | 2 | 0.968807 |
SARDH | chr 9 | 136536183 | 136536184 | rs58222127 | + | C | C/T | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,HGSV, | 2 | 0.988991 |
SARDH | chr 9 | 136578270 | 136578271 | rs582326 | - | G | C/G | intron | 15 | 1000GENOMES,ABI,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,NHLBI-ESP,SC_JCM,SSMP,TISHKOFF | 2 | 0.706989 |
SARDH | chr 9 | 136601389 | 136601390 | rs58418193 | + | T | C/T | intron | 4 | 1000GENOMES,HGSV,ILLUMINA,ILLUMINA-UK, | 2 | 0.026147 |
SARDH | chr 9 | 136552160 | 136552161 | rs58801954 | + | C | C/T | intron | 2 | 1000GENOMES,HGSV, | 2 | 0.983885 |
SARDH | chr 9 | 136589973 | 136589974 | rs58981788 | + | T | C/T | intron | 2 | 1000GENOMES,HGSV, | 2 | 0.011324 |
SARDH | chr 9 | 136598458 | 136598459 | rs593824 | - | C | A/G | intron | 15 | 1000GENOMES,ABI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,PJP,SC_JCM,SC_SN | 2 | 0.390055 |
SARDH | chr 9 | 136561175 | 136561176 | rs59804197 | + | G | C/G | intron | 4 | 1000GENOMES,HGSV,ILLUMINA-UK,TISHKOFF, | 2 | 0.044037 |
SARDH | chr 9 | 136577059 | 136577060 | rs60013235 | + | G | A/G | intron | 6 | 1000GENOMES,COMPLETE_GENOMICS,HGSV,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.052752 |
SARDH | chr 9 | 136538985 | 136538986 | rs60193008 | + | G | C/G | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,HGSV, | 2 | 0.010092 |
SARDH | chr 9 | 136560236 | 136560237 | rs60329120 | + | A | A/T | intron | 5 | 1000GENOMES,COMPLETE_GENOMICS,HGSV,ILLUMINA-UK,TISHKOFF, | 2 | 0.950962 |
SARDH | chr 9 | 136600564 | 136600565 | rs60734798 | + | C | C/T | intron | 2 | 1000GENOMES,HGSV, | 2 | 0.988676 |
SARDH | chr 9 | 136576434 | 136576435 | rs611111 | - | A | C/T | intron | 9 | 1000GENOMES,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,SC_JCM,SSMP, | 2 | 0.183813 |
SARDH | chr 9 | 136545445 | 136545449 | rs61166058 | + | CC | -/CCC | intron | 9 | 1000GENOMES,BCMHGSC_JDW,BUSHMAN,DEVINE_LAB,HGSV,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 0.508257 |
SARDH | chr 9 | 136535745 | 136535746 | rs61685718 | + | C | C/T | missense | 7 | 1000GENOMES,CORNELL,EXOME_CHIP,HGSV,ILLUMINA,NHLBI-ESP,SEATTLESEQ, | 2 | 0.987319 |
SARDH | chr 9 | 136600730 | 136600731 | rs61704862 | + | A | A/C | intron | 4 | 1000GENOMES,HGSV,ILLUMINA-UK,TISHKOFF, | 2 | 0.941284 |
SARDH | chr 9 | 136601109 | 136601110 | rs62572818 | + | C | C/G | intron | 4 | 1000GENOMES,BCMHGSC_JDW,ENSEMBL,SSMP, | 2 | 0.965138 |
SARDH | chr 9 | 136545836 | 136545837 | rs62575444 | + | G | C/G | intron | 6 | 1000GENOMES,BCMHGSC_JDW,COMPLETE_GENOMICS,ENSEMBL,GMI,SSMP, | 2 | 0.051787 |
SARDH | chr 9 | 136548624 | 136548625 | rs62575446 | + | C | A/C | intron | 4 | 1000GENOMES,BCMHGSC_JDW,ILLUMINA,SSMP, | 2 | 0.028285 |
SARDH | chr 9 | 136563143 | 136563144 | rs66702190 | + | G | -/AAA | intron | 2 | 1000GENOMES,HUMANGENOME_JCVI, | 3 | 0.451376 |
SARDH | chr 9 | 136574592 | 136574593 | rs675713 | - | C | C/G | intron | 19 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HG | 2 | 0.635246 |
SARDH | chr 9 | 136578648 | 136578649 | rs688511 | - | A | C/T | intron | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HG | 2 | 0.648182 |
SARDH | chr 9 | 136579678 | 136579679 | rs694357 | - | T | A/C | intron | 14 | 1000GENOMES,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA-UK,PERLEGEN,PJP,SC_JCM,SC_SNP,SSMP,TI | 2 | 0.72369
|
SARDH | chr 9 | 136570739 | 136570740 | rs694821 | - | C | A/G | intron | 22 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HG | 2 | 0.514868 |
SARDH | chr 9 | 136564638 | 136564639 | rs7024662 | + | A | A/G | intron | 2 | 1000GENOMES,BCM_SSAHASNP, | 2 | 0.985192 |
SARDH | chr 9 | 136553741 | 136553742 | rs7024668 | + | C | C/T | intron | 5 | 1000GENOMES,BCM_SSAHASNP,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.933642 |
SARDH | chr 9 | 136549831 | 136549832 | rs7027605 | + | G | G/T | intron | 8 | 1000GENOMES,BCM_SSAHASNP,COMPLETE_GENOMICS,ILLUMINA-UK,PJP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.865948 |
SARDH | chr 9 | 136532544 | 136532545 | rs7033395 | + | C | C/T | intron | 14 | 1000GENOMES,BCM-HGSC-SUB,BCM_SSAHASNP,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCV | 2 | 0.747489 |
SARDH | chr 9 | 136533065 | 136533066 | rs7034045 | + | C | C/T | intron | 4 | 1000GENOMES,BCM_SSAHASNP,SSMP,TISHKOFF, | 2 | 0.958188 |
SARDH | chr 9 | 136586366 | 136586367 | rs7040170 | + | A | A/G | intron | 16 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,ILL | 2 | 0.818717 |
SARDH | chr 9 | 136533303 | 136533304 | rs7043939 | + | T | C/T | intron | 3 | 1000GENOMES,BCM_SSAHASNP,TISHKOFF, | 2 | 0.015189 |
SARDH | chr 9 | 136577353 | 136577354 | rs7048777 | + | C | C/T | intron | 5 | 1000GENOMES,BCM_SSAHASNP,GMI,SSMP,TISHKOFF, | 2 | 0.932571 |
SARDH | chr 9 | 136582035 | 136582047 | rs72139934 | + | TC | -/TCA | intron | 5 | 1000GENOMES,BL,DEVINE_LAB,GMI,LUNTER, | 2 | 0.331038 |
SARDH | chr 9 | 136595457 | 136595458 | rs72761174 | + | G | A/G | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.035813 |
SARDH | chr 9 | 136553771 | 136553772 | rs730007 | - | G | C/T | intron | 13 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,PJP,SC_JCM,SC_SNP,SSMP,TISHKOFF,TSC-CSH | 2 | 0.62934
|
SARDH | chr 9 | 136554314 | 136554315 | rs733149 | - | T | A/G | intron | 13 | 1000GENOMES,ABI,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,HGSV,ILLUMINA,PJP,SC_JCM,SC_SNP,TISHKOFF,TSC-CSHL, | 2 | 0.588567 |
SARDH | chr 9 | 136566479 | 136566480 | rs733347 | - | C | A/G | intron | 19 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HU | 2 | 0.445355 |
SARDH | chr 9 | 136576295 | 136576296 | rs73548033 | + | G | A/G | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.022213 |
SARDH | chr 9 | 136591817 | 136591818 | rs73548054 | + | G | A/G | intron | 8 | 1000GENOMES,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF, | 2 | 0.177819 |
SARDH | chr 9 | 136591921 | 136591922 | rs73548055 | + | G | A/G | intron | 8 | 1000GENOMES,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF, | 2 | 0.178735 |
SARDH | chr 9 | 136540026 | 136540027 | rs73562086 | + | C | C/T | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.984404 |
SARDH | chr 9 | 136547038 | 136547039 | rs73564114 | + | C | C/T | intron | 6 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.88451
|
SARDH | chr 9 | 136547093 | 136547094 | rs73564115 | + | C | C/T | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.982569 |
SARDH | chr 9 | 136549978 | 136549979 | rs73564127 | + | G | A/G | intron | 6 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.069076 |
SARDH | chr 9 | 136551373 | 136551374 | rs73564136 | + | G | A/G | intron | 4 | 1000GENOMES,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.040941 |
SARDH | chr 9 | 136556177 | 136556178 | rs73564158 | + | T | C/T | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.022018 |
SARDH | chr 9 | 136532216 | 136532217 | rs73662176 | + | C | C/T | intron | 3 | 1000GENOMES,ILLUMINA-UK,TISHKOFF, | 2 | 0.987156 |
SARDH | chr 9 | 136532676 | 136532677 | rs73662177 | + | G | A/G | intron | 3 | 1000GENOMES,ILLUMINA-UK,TISHKOFF, | 2 | 0.016514 |
SARDH | chr 9 | 136532983 | 136532984 | rs73662178 | + | G | A/G | intron | 4 | 1000GENOMES,ILLUMINA,ILLUMINA-UK,TISHKOFF, | 2 | 0.013303 |
SARDH | chr 9 | 136533143 | 136533144 | rs73662179 | + | A | A/G | intron | 3 | 1000GENOMES,ILLUMINA-UK,TISHKOFF, | 2 | 0.986697 |
SARDH | chr 9 | 136534817 | 136534818 | rs73662180 | + | G | A/G | intron | 3 | 1000GENOMES,ILLUMINA-UK,TISHKOFF, | 2 | 0.01422
|
SARDH | chr 9 | 136586653 | 136586654 | rs73662181 | + | G | A/G | intron | 2 | 1000GENOMES,ILLUMINA-UK, | 2 | 0.015596 |
SARDH | chr 9 | 136596891 | 136596892 | rs73662182 | + | G | C/G | intron | 2 | 1000GENOMES,ILLUMINA-UK, | 2 | 0.025229 |
SARDH | chr 9 | 136598533 | 136598534 | rs73662183 | + | C | A/C | intron | 4 | 1000GENOMES,ILLUMINA,ILLUMINA-UK,TISHKOFF, | 2 | 0.036697 |
SARDH | chr 9 | 136598555 | 136598556 | rs73662184 | + | A | A/C | intron | 3 | 1000GENOMES,ILLUMINA-UK,TISHKOFF, | 2 | 0.963303 |
SARDH | chr 9 | 136600483 | 136600484 | rs73662185 | + | G | A/G | intron | 3 | 1000GENOMES,ILLUMINA-UK,TISHKOFF, | 2 | 0.031651 |
SARDH | chr 9 | 136583719 | 136583720 | rs74359862 | + | G | A/G | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.011927 |
SARDH | chr 9 | 136533227 | 136533228 | rs74516139 | + | G | A/G | intron | 4 | 1000GENOMES,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.030923 |
SARDH | chr 9 | 136550672 | 136550673 | rs74587289 | + | T | C/T | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.016972 |
SARDH | chr 9 | 136571011 | 136571012 | rs74907587 | + | G | C/G | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.019266 |
SARDH | chr 9 | 136565033 | 136565034 | rs75175839 | + | G | G/T | intron | 4 | 1000GENOMES,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.971854 |
SARDH | chr 9 | 136538829 | 136538830 | rs75239212 | + | T | C/T | intron | 1 | 1000GENOMES, | 2 | 0.014373 |
SARDH | chr 9 | 136587369 | 136587370 | rs75381910 | + | G | A/G | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.022477 |
SARDH | chr 9 | 136600676 | 136600677 | rs75391229 | + | G | A/G | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.021341 |
SARDH | chr 9 | 136558131 | 136558132 | rs75516508 | + | C | C/G | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.97953
|
SARDH | chr 9 | 136577707 | 136577708 | rs756680 | - | G | C/T | intron | 9 | 1000GENOMES,ABI,BCM_SSAHASNP,GMI,ILLUMINA,NHLBI-ESP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.936333 |
SARDH | chr 9 | 136577376 | 136577377 | rs756681 | - | C | A/G | intron | 5 | 1000GENOMES,BCM_SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.066307 |
SARDH | chr 9 | 136556141 | 136556142 | rs756682 | - | T | A/G | intron | 22 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA,I | 2 | 0.578665 |
SARDH | chr 9 | 136549793 | 136549794 | rs756687 | - | C | C/G | intron | 18 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,IL | 2 | 0.524502 |
SARDH | chr 9 | 136549042 | 136549043 | rs756690 | - | C | A/G | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA-UK,PJP,SC_JCM,SC_SNP,SSMP, | 2 | 0.375192 |
SARDH | chr 9 | 136548798 | 136548799 | rs756691 | - | T | A/G | intron | 20 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA,I | 2 | 0.50804
|
SARDH | chr 9 | 136530341 | 136530342 | rs75737448 | + | G | A/G | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.011324 |
SARDH | chr 9 | 136589733 | 136589734 | rs75908519 | + | G | A/G | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.032672 |
SARDH | chr 9 | 136559713 | 136559714 | rs76159104 | + | C | C/G | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.983028 |
SARDH | chr 9 | 136586272 | 136586273 | rs76230435 | + | C | C/T | intron | 3 | 1000GENOMES,ILLUMINA,SSMP, | 2 | 0.967301 |
SARDH | chr 9 | 136576804 | 136576805 | rs76396042 | + | G | A/G | intron | 3 | 1000GENOMES,ILLUMINA,TISHKOFF, | 2 | 0.012195 |
SARDH | chr 9 | 136541358 | 136541359 | rs76413010 | + | C | C/T | intron | 3 | 1000GENOMES,ILLUMINA,SSMP, | 2 | 0.977787 |
SARDH | chr 9 | 136603313 | 136603314 | rs76970700 | + | A | A/C | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.988062 |
SARDH | chr 9 | 136536354 | 136536355 | rs77223280 | + | C | A/C | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.010017 |
SARDH | chr 9 | 136569528 | 136569529 | rs77507444 | + | G | A/G | intron | 1 | 1000GENOMES, | 2 | 0.015679 |
SARDH | chr 9 | 136580738 | 136580739 | rs77665633 | + | C | C/T | intron | 4 | 1000GENOMES,MPI_MOLGEN,SSMP,TISHKOFF, | 2 | 0.981175 |
SARDH | chr 9 | 136575074 | 136575075 | rs77691748 | + | G | C/G | intron | 5 | 1000GENOMES,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF, | 2 | 0.055505 |
SARDH | chr 9 | 136562185 | 136562186 | rs77917492 | + | G | A/G | intron | 1 | 1000GENOMES, | 2 | 0.015679 |
SARDH | chr 9 | 136591307 | 136591308 | rs78235809 | + | T | G/T | intron | 2 | 1000GENOMES,ILLUMINA-UK, | 2 | 0.038991 |
SARDH | chr 9 | 136589724 | 136589725 | rs7848155 | + | C | C/T | intron | 4 | 1000GENOMES,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.955712 |
SARDH | chr 9 | 136537134 | 136537135 | rs78497249 | + | T | C/T | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.018277 |
SARDH | chr 9 | 136586262 | 136586263 | rs7849946 | + | G | A/G | intron | 16 | 1000GENOMES,ABI,AFFY,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,KRIBB_YJKIM,PJP,S | 2 | 0.283622 |
SARDH | chr 9 | 136564520 | 136564521 | rs7852531 | + | A | A/G | intron | 13 | 1000GENOMES,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SC_SNP,SSAHASNP,S | 2 | 0.550023 |
SARDH | chr 9 | 136553790 | 136553791 | rs7852702 | + | C | C/T | intron | 6 | 1000GENOMES,ABI,CSHL-HAPMAP,ENSEMBL,TISHKOFF,WI_SSAHASNP, | 2 | 0.982946 |
SARDH | chr 9 | 136532106 | 136532107 | rs7854480 | + | G | C/G | intron | 19 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENO | 2 | 0.684689 |
SARDH | chr 9 | 136595939 | 136595940 | rs7857062 | + | A | A/C | intron | 2 | 1000GENOMES,WI_SSAHASNP, | 2 | 0.988062 |
SARDH | chr 9 | 136585379 | 136585380 | rs7857468 | + | C | A/C | intron | 13 | 1000GENOMES,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,PJP,SC_SNP,SSMP,TISHK | 2 | 0.171846 |
SARDH | chr 9 | 136550251 | 136550252 | rs7859013 | + | C | C/T | intron | 6 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.929125 |
SARDH | chr 9 | 136601499 | 136601500 | rs7861063 | + | G | G/T | intron | 8 | 1000GENOMES,BCM-HGSC-SUB,BGI,GMI,ILLUMINA-UK,PJP,TISHKOFF,WI_SSAHASNP, | 2 | 0.80367
|
SARDH | chr 9 | 136585638 | 136585639 | rs7870095 | + | T | C/T | intron | 13 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,PJP,SC_SNP,SSMP,TISHK | 2 | 0.192501 |
SARDH | chr 9 | 136553458 | 136553459 | rs7871679 | + | C | C/T | intron | 4 | 1000GENOMES,CSHL-HAPMAP,TISHKOFF,WI_SSAHASNP, | 2 | 0.980836 |
SARDH | chr 9 | 136554579 | 136554580 | rs78992322 | + | C | C/T | intron | 1 | 1000GENOMES, | 2 | 0.983885 |
SARDH | chr 9 | 136586788 | 136586789 | rs79069738 | + | G | A/G | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.011324 |
SARDH | chr 9 | 136572349 | 136572350 | rs79105233 | + | C | C/T | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.989983 |
SARDH | chr 9 | 136553468 | 136553469 | rs79366868 | + | C | A/C | intron | 3 | 1000GENOMES,ILLUMINA,SSMP, | 2 | 0.010879 |
SARDH | chr 9 | 136578463 | 136578464 | rs79775681 | + | C | C/G | intron | 1 | 1000GENOMES, | 2 | 0.97953
|
SARDH | chr 9 | 136564033 | 136564034 | rs80239667 | + | T | C/T | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.015679 |
SARDH | chr 9 | 136597018 | 136597019 | rs80264584 | + | C | C/T | intron | 1 | 1000GENOMES, | 2 | 0.983014 |
SARDH | chr 9 | 136570771 | 136570772 | rs80269519 | + | C | C/T | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.987805 |
SARDH | chr 9 | 136532608 | 136532609 | rs80350133 | + | C | C/T | intron | 3 | 1000GENOMES,ILLUMINA-UK,TISHKOFF, | 2 | 0.986239 |
SARDH | chr 9 | 136545038 | 136545039 | rs875152 | + | T | C/T | intron | 10 | 1000GENOMES,ABI,COMPLETE_GENOMICS,ILLUMINA,ILLUMINA-UK,PJP,SC_SNP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.075369 |
SARDH | chr 9 | 136555628 | 136555629 | rs886016 | - | T | A/G | missense | 27 | 1000GENOMES,ABI,APPLERA_GI,BCM_SSAHASNP,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,EXOME_CHIP,GMI,HGBA | 2 | 0.469593 |
SARDH | chr 9 | 136596396 | 136596397 | rs916619 | - | G | C/T | intron | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BUSHMAN,CLINSEQ_SNP,ENSEMBL,GMI,HUMANGENOME_JCVI,NHLBI | 2 | 0.707527 |
SARDH | chr 9 | 136596749 | 136596750 | rs916620 | - | C | A/G | intron | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BL,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,P | 2 | 0.243022 |
SARDH | chr 9 | 136577023 | 136577024 | rs9409818 | + | G | A/G | intron | 13 | 1000GENOMES,ABI,BCM-HGSC-SUB,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,PJP,SC_SNP,SSAHASNP,SSMP,T | 2 | 0.281079 |
SARDH | chr 9 | 136578461 | 136578462 | rs9409819 | + | A | A/G | intron | 14 | 1000GENOMES,ABI,BCM-HGSC-SUB,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,PJP | 2 | 0.719122 |
SARDH | chr 9 | 136534476 | 136534477 | rs9409841 | + | G | C/G | intron | 11 | 1000GENOMES,ABI,BGI,BL,BUSHMAN,GMI,HGSV,ILLUMINA-UK,SC_SNP,SSAHASNP,SSMP, | 2 | 0.592576 |
SARDH | chr 9 | 136534969 | 136534970 | rs9409842 | + | G | A/G | intron | 14 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP | 2 | 0.267825 |
SARDH | chr 9 | 136536056 | 136536057 | rs9409843 | + | T | C/T | intron | 18 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,H | 2 | 0.653126 |
SARDH | chr 9 | 136550475 | 136550476 | rs9409845 | + | C | C/T | intron | 3 | 1000GENOMES,SC_SNP,SSMP, | 2 | 0.963882 |
SARDH | chr 9 | 136573051 | 136573052 | rs9409848 | + | T | C/T | intron | 16 | 1000GENOMES,ABI,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_J | 2 | 0.468579 |
SARDH | chr 9 | 136585104 | 136585105 | rs9409849 | + | C | C/T | intron | 7 | 1000GENOMES,ABI,BL,ENSEMBL,HUMANGENOME_JCVI,SC_SNP,SSMP, | 2 | 0.701007 |
SARDH | chr 9 | 136600740 | 136600741 | rs9409853 | + | G | C/G/T | intron | 5 | 1000GENOMES,GMI,ILLUMINA,SC_SNP,SSMP, | 2 | 0.035883 |
SARDH | chr 9 | 136532432 | 136532433 | rs9409877 | + | C | A/C | intron | 13 | 1000GENOMES,ABI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_SNP,SSAHASNP, | 2 | 0.250229 |
SARDH | chr 9 | 136534693 | 136534694 | rs9409878 | + | A | A/C | intron | 11 | 1000GENOMES,ABI,BGI,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,SC_SNP,SSMP,TISHKOFF, | 2 | 0.656279 |
SARDH | chr 9 | 136535199 | 136535200 | rs9409879 | + | C | C/G | intron | 12 | 1000GENOMES,ABI,BCM-HGSC-SUB,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,SC_SNP,SSAHA | 2 | 0.755942 |
SHMT1 | chr 17 | 18255497 | 18255498 | rs11078415 | + | C | C/T | intron | 9 | 1000GENOMES,BCMHGSC_JDW,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,SC_SNP,SSMP,TISHKOFF, | 2 | 0.763278 |
SHMT1 | chr 17 | 18242841 | 18242842 | rs111255206 | + | G | G/T | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA, | 2 | 0.986239 |
SHMT1 | chr 17 | 18253607 | 18253608 | rs111436543 | + | G | A/G | intron | 5 | 1000GENOMES,BCM-HGSC-SUB,COMPLETE_GENOMICS,GMI,SSMP, | 2 | 0.125688 |
SHMT1 | chr 17 | 18249260 | 18249261 | rs111573761 | + | G | G/T | intron | 4 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,SSMP, | 2 | 0.987168 |
SHMT1 | chr 17 | 18260160 | 18260161 | rs111649043 | + | G | A/G | intron | 2 | 1000GENOMES,COMPLETE_GENOMICS, | 2 | 0.011927 |
SHMT1 | chr 17 | 18264623 | 18264624 | rs111713274 | + | A | A/C | intron | 3 | 1000GENOMES,BCM-HGSC-SUB,GMI, | 2 | 0.87787
|
SHMT1 | chr 17 | 18248881 | 18248882 | rs111895841 | + | G | A/G | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.02751
|
SHMT1 | chr 17 | 18259597 | 18259598 | rs112258851 | + | C | C/T | intron | 6 | 1000GENOMES,BCM-HGSC-SUB,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF, | 2 | 0.872936 |
SHMT1 | chr 17 | 18258479 | 18258480 | rs112499673 | + | G | A/G | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,GMI,SSMP, | 2 | 0.127064 |
SHMT1 | chr 17 | 18232011 | 18232012 | rs112604682 | + | G | A/G | untranslated-3 | 6 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,ILLUMINA,NHLBI-ESP,SSMP, | 2 | 0.01604
|
SHMT1 | chr 17 | 18261735 | 18261736 | rs113042315 | + | A | A/G | intron | 5 | 1000GENOMES,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF, | 2 | 0.874771 |
SHMT1 | chr 17 | 18264829 | 18264830 | rs113181235 | + | A | A/G | intron | 6 | 1000GENOMES,BCM-HGSC-SUB,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF, | 2 | 0.879817 |
SHMT1 | chr 17 | 18255528 | 18255529 | rs113219690 | + | G | A/G | intron | 5 | 1000GENOMES,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF, | 2 | 0.127064 |
SHMT1 | chr 17 | 18259517 | 18259518 | rs113534518 | + | G | A/G | intron | 4 | 1000GENOMES,BUSHMAN,SSMP,TISHKOFF, | 2 | 0.035273 |
SHMT1 | chr 17 | 18252502 | 18252503 | rs113855689 | + | G | A/G | intron | 2 | 1000GENOMES,COMPLETE_GENOMICS, | 2 | 0.011927 |
SHMT1 | chr 17 | 18261528 | 18261529 | rs113972910 | + | G | C/G | intron | 2 | 1000GENOMES,COMPLETE_GENOMICS, | 2 | 0.010092 |
SHMT1 | chr 17 | 18254380 | 18254381 | rs114750228 | + | A | A/T | intron | 1 | 1000GENOMES, | 2 | 0.986934 |
SHMT1 | chr 17 | 18261187 | 18261188 | rs115210063 | + | T | A/T | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.123817 |
SHMT1 | chr 17 | 18255449 | 18255450 | rs116061074 | + | C | A/C | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.033101 |
SHMT1 | chr 17 | 18232135 | 18232136 | rs116100382 | + | G | A/G | coding-synon | 5 | 1000GENOMES,CLINSEQ_SNP,ILLUMINA,NHLBI-ESP,TISHKOFF, | 2 | 0.018245 |
SHMT1 | chr 17 | 18234147 | 18234148 | rs116581760 | + | G | A/G | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.018293 |
SHMT1 | chr 17 | 18247499 | 18247500 | rs116754130 | + | C | C/T | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.981707 |
SHMT1 | chr 17 | 18266847 | 18266848 | rs117093579 | + | G | A/G | untranslated-5 | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.01349
|
SHMT1 | chr 17 | 18253024 | 18253025 | rs117513105 | + | C | C/T | intron | 1 | 1000GENOMES, | 2 | 0.98738
|
SHMT1 | chr 17 | 18262583 | 18262584 | rs11867855 | + | G | G/T | intron | 11 | 1000GENOMES,ABI,BCMHGSC_JDW,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF, | 2 | 0.765055 |
SHMT1 | chr 17 | 18244612 | 18244613 | rs11868708 | + | T | C/T | intron | 11 | 1000GENOMES,ABI,BCMHGSC_JDW,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,PJP,SSMP,TISHKOFF, | 2 | 0.231567 |
SHMT1 | chr 17 | 18242080 | 18242081 | rs11869515 | + | A | A/C | intron | 8 | 1000GENOMES,ABI,BCMHGSC_JDW,CSHL-HAPMAP,GMI,HGSV,SSMP,TISHKOFF, | 2 | 0.772018 |
SHMT1 | chr 17 | 18264226 | 18264227 | rs11871761 | + | T | C/T | intron | 8 | 1000GENOMES,BCMHGSC_JDW,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,SSMP,TISHKOFF, | 2 | 0.245197 |
SHMT1 | chr 17 | 18253821 | 18253822 | rs12450760 | + | C | C/T | intron | 9 | 1000GENOMES,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,SSMP,TISHKOFF, | 2 | 0.730101 |
SHMT1 | chr 17 | 18233271 | 18233272 | rs12451555 | + | T | G/T | intron | 9 | 1000GENOMES,ABI,BCMHGSC_JDW,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,SSMP,TISHKOFF, | 2 | 0.240605 |
SHMT1 | chr 17 | 18237115 | 18237116 | rs12451698 | + | A | A/G | intron | 10 | 1000GENOMES,ABI,BCMHGSC_JDW,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,PJP,SSMP,TISHKOFF, | 2 | 0.760531 |
SHMT1 | chr 17 | 18251235 | 18251236 | rs12451807 | + | T | G/T | intron | 6 | 1000GENOMES,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,SSMP, | 2 | 0.221866 |
SHMT1 | chr 17 | 18241530 | 18241531 | rs12601687 | + | G | A/G | intron | 6 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,CSHL-HAPMAP,SSMP, | 2 | 0.149679 |
SHMT1 | chr 17 | 18262587 | 18262588 | rs12602780 | + | T | C/T | intron | 9 | 1000GENOMES,ABI,BGI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,SSMP,TISHKOFF, | 2 | 0.127057 |
SHMT1 | chr 17 | 18241217 | 18241218 | rs12603622 | + | T | C/T | intron | 9 | 1000GENOMES,ABI,BCMHGSC_JDW,CSHL-HAPMAP,GMI,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP, | 2 | 0.387615 |
SHMT1 | chr 17 | 18257810 | 18257811 | rs12603682 | + | G | A/G | intron | 11 | 1000GENOMES,ABI,BGI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF, | 2 | 0.127747 |
SHMT1 | chr 17 | 18233809 | 18233810 | rs12937300 | + | T | C/T | intron | 20 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BGI,BUSHMAN,CLINSEQ_SNP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA | 2 | 0.204713 |
SHMT1 | chr 17 | 18253273 | 18253274 | rs12939092 | + | C | C/T | intron | 10 | 1000GENOMES,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.763495 |
SHMT1 | chr 17 | 18259414 | 18259415 | rs12950117 | + | A | A/G | intron | 16 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_ | 2 | 0.325592 |
SHMT1 | chr 17 | 18231796 | 18231797 | rs12952556 | + | T | C/T | near-gene-3,unt | 19 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,IL | 3 | 0.245124 |
SHMT1 | chr 17 | 18233630 | 18233631 | rs12952667 | + | G | A/G | intron | 16 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMIN | 2 | 0.247689 |
SHMT1 | chr 17 | 18252303 | 18252303 | rs137955656 | + | - | -/A | intron | 6 | 1000GENOMES,GMI,LUNTER,SSMP,TISHKOFF,WARNICH_LAB, | 2 | 0.857208 |
SHMT1 | chr 17 | 18248835 | 18248836 | rs138960294 | + | G | G/T | intron | 1 | 1000GENOMES, | 2 | 0.98944
|
SHMT1 | chr 17 | 18237338 | 18237339 | rs139376285 | + | G | A/G | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.012856 |
SHMT1 | chr 17 | 18244467 | 18244467 | rs140209629 | + | - | -/A | intron | 5 | 1000GENOMES,BILGI_BIOE,GMI,LUNTER,TISHKOFF, | 2 | 0.874656 |
SHMT1 | chr 17 | 18263174 | 18263175 | rs140468298 | + | G | C/G | intron | 1 | 1000GENOMES, | 2 | 0.011019 |
SHMT1 | chr 17 | 18248719 | 18248720 | rs140764346 | + | C | C/T | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.976584 |
SHMT1 | chr 17 | 18266785 | 18266786 | rs140956276 | + | G | A/G | untranslated-5 | 1 | 1000GENOMES, | 2 | 0.01056
|
SHMT1 | chr 17 | 18259333 | 18259335 | rs142013082 | + | AT | -/AT | intron | 7 | 1000GENOMES,BILGI_BIOE,GMI,LUNTER,SSMP,TISHKOFF,WARNICH_LAB, | 2 | 0.126263 |
SHMT1 | chr 17 | 18264573 | 18264574 | rs143205675 | + | C | C/G | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.979339 |
SHMT1 | chr 17 | 18246270 | 18246270 | rs143292731 | + | - | -/AAT | intron | 2 | 1000GENOMES,LUNTER, | 2 | 0.984848 |
SHMT1 | chr 17 | 18261212 | 18261213 | rs143729020 | + | T | C/T | intron | 1 | 1000GENOMES, | 2 | 0.010101 |
SHMT1 | chr 17 | 18248992 | 18248996 | rs145266771 | + | TT | -/TTA | intron | 4 | 1000GENOMES,BILGI_BIOE,LUNTER,SSMP, | 2 | 0.124885 |
SHMT1 | chr 17 | 18257802 | 18257803 | rs145850149 | + | G | A/G | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.038567 |
SHMT1 | chr 17 | 18257778 | 18257778 | rs146363502 | + | - | -/A | intron | 3 | 1000GENOMES,LUNTER,TISHKOFF, | 2 | 0.961433 |
SHMT1 | chr 17 | 18263663 | 18263664 | rs146579918 | + | C | C/T | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.984848 |
SHMT1 | chr 17 | 18253042 | 18253042 | rs147247319 | + | - | -/A | intron | 5 | 1000GENOMES,BILGI_BIOE,GMI,LUNTER,SSMP, | 2 | 0.873278 |
SHMT1 | chr 17 | 18240855 | 18240855 | rs147810241 | + | - | -/CCC | cds-indel | 2 | 1000GENOMES,LUNTER, | 2 | 0.74977
|
SHMT1 | chr 17 | 18239266 | 18239269 | rs148366906 | + | TC | -/TCT | intron | 6 | 1000GENOMES,BILGI_BIOE,GMI,LUNTER,SSMP,WARNICH_LAB, | 2 | 0.118916 |
SHMT1 | chr 17 | 18241861 | 18241862 | rs148864440 | + | G | A/G | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.039945 |
SHMT1 | chr 17 | 18249033 | 18249034 | rs149553940 | + | G | A/G | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.015151 |
SHMT1 | chr 17 | 18232517 | 18232518 | rs17806333 | + | T | C/T | intron | 4 | 1000GENOMES,ILLUMINA,KRIBB_YJKIM,PERLEGEN, | 2 | 0.01009
|
SHMT1 | chr 17 | 18249610 | 18249611 | rs17806489 | + | G | A/G | intron | 10 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BGI,COMPLETE_GENOMICS,GMI,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.124047 |
SHMT1 | chr 17 | 18258662 | 18258663 | rs181131243 | + | G | A/G | intron | 1 | 1000GENOMES, | 2 | 0.011019 |
SHMT1 | chr 17 | 18258153 | 18258154 | rs181675331 | + | T | C/T | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.107897 |
SHMT1 | chr 17 | 18262237 | 18262238 | rs182365062 | + | T | A/T | intron | 1 | 1000GENOMES, | 2 | 0.014692 |
SHMT1 | chr 17 | 18266629 | 18266630 | rs182842768 | + | C | C/T | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.988062 |
SHMT1 | chr 17 | 18258710 | 18258711 | rs190033219 | + | G | A/G | intron | 1 | 1000GENOMES, | 2 | 0.023416 |
SHMT1 | chr 17 | 18244813 | 18244814 | rs1975821 | - | T | A/G | intron | 15 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCV | 2 | 0.575605 |
SHMT1 | chr 17 | 18244769 | 18244770 | rs1975822 | - | C | A/G | intron | 15 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCV | 2 | 0.417085 |
SHMT1 | chr 17 | 18231997 | 18231998 | rs1979276 | + | G | A/G | untranslated-3 | 22 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANG | 2 | 0.333412 |
SHMT1 | chr 17 | 18232095 | 18232096 | rs1979277 | + | G | A/G | missense | 27 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,EXOME_CHI | 2 | 0.281109 |
SHMT1 | chr 17 | 18240400 | 18240404 | rs199987915 | + | CT | -/CTA | intron | 1 | 1000GENOMES, | 2 | 0.222222 |
SHMT1 | chr 17 | 18263562 | 18263562 | rs200421267 | + | - | -/A | intron | 1 | 1000GENOMES, | 2 | 0.980257 |
SHMT1 | chr 17 | 18252390 | 18252393 | rs200837973 | + | CA | -/CAC | intron | 2 | 1000GENOMES,LUNTER, | 2 | 0.014692 |
SHMT1 | chr 17 | 18251235 | 18251235 | rs201416040 | + | - | -/G | intron | 1 | 1000GENOMES, | 2 | 0.781451 |
SHMT1 | chr 17 | 18251231 | 18251231 | rs201892779 | + | - | -/G | intron | 1 | 1000GENOMES, | 2 | 0.969697 |
SHMT1 | chr 17 | 18232957 | 18232958 | rs2125154 | + | T | G/T | intron | 12 | 1000GENOMES,ABI,AFFY,BCM_SSAHASNP,BUSHMAN,KRIBB_YJKIM,PJP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP,WUGSC_S | 2 | 0.07667
|
SHMT1 | chr 17 | 18240745 | 18240746 | rs2168781 | - | C | C/G | intron | 17 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMIN | 2 | 0.446708 |
SHMT1 | chr 17 | 18256978 | 18256979 | rs2273026 | - | C | A/G | intron | 15 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BGI,CLINSEQ_SNP,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,NHLBI- | 2 | 0.118536 |
SHMT1 | chr 17 | 18250526 | 18250527 | rs2273027 | - | C | A/G | intron | 17 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,ILL | 3 | 0.43737
|
SHMT1 | chr 17 | 18239011 | 18239012 | rs2273028 | - | G | C/T | intron | 24 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSE | 2 | 0.698502 |
SHMT1 | chr 17 | 18236338 | 18236339 | rs2273029 | - | G | C/T | intron | 9 | 1000GENOMES,BCMHGSC_JDW,COMPLETE_GENOMICS,ENSEMBL,GMI,PERLEGEN,SSMP,TISHKOFF,YUSUKE, | 2 | 0.774541 |
SHMT1 | chr 17 | 18265466 | 18265467 | rs2461837 | - | C | A/G | intron | 15 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BUSHMAN,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,PERLEGEN,PJP,SC_JC | 2 | 0.194455 |
SHMT1 | chr 17 | 18265263 | 18265264 | rs2461838 | - | G | C/T | intron | 19 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BGI,BUSHMAN,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK | 2 | 0.819828 |
SHMT1 | chr 17 | 18263043 | 18263044 | rs2688030 | - | A | C/T | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL, | 2 | 0.678035 |
SHMT1 | chr 17 | 18262545 | 18262546 | rs2688036 | - | T | A/G | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSE | 2 | 0.350023 |
SHMT1 | chr 17 | 18251093 | 18251094 | rs28479066 | + | C | C/T | intron | 3 | 1000GENOMES,SSAHASNP,TISHKOFF, | 2 | 0.954704 |
SHMT1 | chr 17 | 18251808 | 18251809 | rs28630807 | + | T | G/T | intron | 6 | 1000GENOMES,CLINSEQ_SNP,ILLUMINA,NHLBI-ESP,SSAHASNP,TISHKOFF, | 2 | 0.021595 |
SHMT1 | chr 17 | 18262528 | 18262529 | rs28842509 | + | G | A/G | intron | 3 | 1000GENOMES,SSAHASNP,TISHKOFF, | 2 | 0.030303 |
SHMT1 | chr 17 | 18241344 | 18241345 | rs35253049 | + | T | C/T | intron | 5 | 1000GENOMES,ABI,HGSV,HUMANGENOME_JCVI,SSMP, | 2 | 0.226606 |
SHMT1 | chr 17 | 18266610 | 18266610 | rs35311598 | + | - | -/C | intron | 10 | 1000GENOMES,ABI,DEVINE_LAB,HGSV,HUMANGENOME_JCVI,LUNTER,PJP,SNP500CANCER,SSMP,TISHKOFF, | 2 | 0.803709 |
SHMT1 | chr 17 | 18241353 | 18241354 | rs36074773 | + | G | C/G | intron | 6 | 1000GENOMES,ABI,ENSEMBL,HGSV,HUMANGENOME_JCVI,SSMP, | 2 | 0.221612 |
SHMT1 | chr 17 | 18246945 | 18246946 | rs374706387 | + | G | -/A/A | intron | 3 | 1000GENOMES,ABI,HUMANGENOME_JCVI, | 3 | 0.672477 |
SHMT1 | chr 17 | 18232016 | 18232017 | rs3783 | + | G | C/G | untranslated-3 | 21 | 1000GENOMES,ABI,BUSHMAN,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJK | 2 | 0.197688 |
SHMT1 | chr 17 | 18242896 | 18242897 | rs3794772 | + | C | C/T | intron | 13 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF,WI | 2 | 0.705802 |
SHMT1 | chr 17 | 18243061 | 18243062 | rs3794773 | + | G | A/G | intron | 8 | 1000GENOMES,BCM-HGSC-SUB,BGI,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF,YUSUKE, | 2 | 0.125688 |
SHMT1 | chr 17 | 18252009 | 18252010 | rs3866955 | - | T | A/G | intron | 16 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA, | 2 | 0.578601 |
SHMT1 | chr 17 | 18255078 | 18255079 | rs4500798 | + | T | G/T | intron | 12 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,DEVINE_LAB,GMI,ILLUMINA,SC_JCM,SSM | 2 | 0.262791 |
SHMT1 | chr 17 | 18260752 | 18260753 | rs4924750 | + | C | C/G | intron | 16 | 1000GENOMES,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BUSHMAN,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK, | 2 | 0.80984
|
SHMT1 | chr 17 | 18242442 | 18242443 | rs4924848 | + | C | C/T | intron | 7 | 1000GENOMES,BCM_SSAHASNP,BUSHMAN,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.953668 |
SHMT1 | chr 17 | 18247279 | 18247280 | rs4924849 | + | C | C/T | intron | 17 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMIN | 2 | 0.759273 |
SHMT1 | chr 17 | 18234466 | 18234467 | rs4925174 | + | A | A/G | intron | 7 | 1000GENOMES,AFFY,ILLUMINA,KRIBB_YJKIM,PERLEGEN,TISHKOFF,WI_SSAHASNP, | 2 | 0.965753 |
SHMT1 | chr 17 | 18237662 | 18237663 | rs4925175 | + | A | A/G | intron | 6 | 1000GENOMES,BCM_SSAHASNP,BUSHMAN,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.950436 |
SHMT1 | chr 17 | 18252867 | 18252868 | rs4925177 | + | C | C/G | intron | 12 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,PERLEGEN,PJP,SNP500CANCER,SSMP,TISHKOF | 2 | 0.735108 |
SHMT1 | chr 17 | 18252910 | 18252911 | rs4925178 | + | T | C/T | intron | 12 | 1000GENOMES,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,PERLEGEN,PJP,SNP500CANCER,SSMP,TIS | 2 | 0.267936 |
SHMT1 | chr 17 | 18253028 | 18253029 | rs4925179 | + | A | A/T | intron | 17 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMA | 2 | 0.324078 |
SHMT1 | chr 17 | 18253057 | 18253058 | rs4925180 | + | G | A/G | intron | 5 | 1000GENOMES,BUSHMAN,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.036196 |
SHMT1 | chr 17 | 18263426 | 18263427 | rs55844190 | + | G | A/G | intron | 7 | 1000GENOMES,BCM-HGSC-SUB,COMPLETE_GENOMICS,GMI,HGSV,SSMP,TISHKOFF, | 2 | 0.122477 |
SHMT1 | chr 17 | 18258966 | 18258966 | rs55845680 | + | - | -/C | intron | 7 | 1000GENOMES,BILGI_BIOE,GMI,HGSV,LUNTER,SSMP,TISHKOFF, | 2 | 0.873278 |
SHMT1 | chr 17 | 18259999 | 18260000 | rs55912774 | + | A | A/C | intron | 8 | 1000GENOMES,BCM-HGSC-SUB,BGI,COMPLETE_GENOMICS,GMI,HGSV,SSMP,TISHKOFF, | 2 | 0.872936 |
SHMT1 | chr 17 | 18263497 | 18263498 | rs56018054 | + | G | G/T | intron | 7 | 1000GENOMES,BCM-HGSC-SUB,COMPLETE_GENOMICS,GMI,HGSV,SSMP,TISHKOFF, | 2 | 0.880734 |
SHMT1 | chr 17 | 18259794 | 18259795 | rs56159325 | + | G | A/G | intron | 6 | 1000GENOMES,COMPLETE_GENOMICS,GMI,HGSV,SSMP,TISHKOFF, | 2 | 0.128899 |
SHMT1 | chr 17 | 18233441 | 18233442 | rs57706516 | + | T | C/T | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,HGSV, | 2 | 0.022477 |
SHMT1 | chr 17 | 18233717 | 18233717 | rs59627826 | + | - | -/C/G | intron | 5 | 1000GENOMES,HGSV,LUNTER,SNP500CANCER,TISHKOFF, | 3 | 0.953596 |
SHMT1 | chr 17 | 18258202 | 18258203 | rs599147 | - | T | A/T | intron | 9 | 1000GENOMES,ABI,ENSEMBL,GMI,HUMANGENOME_JCVI,KWOK,PJP,SC_JCM,SSAHASNP, | 2 | 0.40055
|
SHMT1 | chr 17 | 18243871 | 18243872 | rs62072543 | + | G | A/G | intron | 6 | 1000GENOMES,BCMHGSC_JDW,ENSEMBL,GMI,ILLUMINA,SSMP, | 2 | 0.219266 |
SHMT1 | chr 17 | 18243872 | 18243873 | rs62072544 | + | C | C/T | intron | 5 | 1000GENOMES,BCMHGSC_JDW,ENSEMBL,GMI,SSMP, | 2 | 0.780734 |
SHMT1 | chr 17 | 18253603 | 18253604 | rs62072545 | + | C | C/T | intron | 7 | 1000GENOMES,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,SSMP, | 2 | 0.723775 |
SHMT1 | chr 17 | 18253838 | 18253839 | rs62072546 | + | C | C/T | intron | 5 | 1000GENOMES,BCMHGSC_JDW,COMPLETE_GENOMICS,ENSEMBL,SSMP, | 2 | 0.886343 |
SHMT1 | chr 17 | 18258149 | 18258150 | rs638318 | - | A | C/T | intron | 13 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,CSHL-HAPMAP,ENSEMBL,GMI,KWOK,PJP,SC_JCM,SSAHASNP,SS | 2 | 0.640697 |
SHMT1 | chr 17 | 18257647 | 18257648 | rs640629 | - | A | C/T | intron | 17 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUM | 2 | 0.631555 |
SHMT1 | chr 17 | 18257593 | 18257594 | rs641028 | - | A | C/T | intron | 16 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME | 2 | 0.660584 |
SHMT1 | chr 17 | 18232570 | 18232571 | rs6502648 | + | C | A/C | intron | 13 | 1000GENOMES,AFFY,BCM_SSAHASNP,BUSHMAN,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,PJP,SSMP,TISHKOFF,WI_S | 2 | 0.071331 |
SHMT1 | chr 17 | 18239895 | 18239896 | rs6502649 | + | G | A/G | intron | 12 | 1000GENOMES,ABI,BCM_SSAHASNP,COMPLETE_GENOMICS,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSMP,TISHKO | 2 | 0.245654 |
SHMT1 | chr 17 | 18255574 | 18255575 | rs6502650 | + | A | A/C | intron | 12 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,SSMP,TI | 2 | 0.354367 |
SHMT1 | chr 17 | 18263956 | 18263957 | rs669340 | + | G | C/G | intron | 23 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP | 2 | 0.644519 |
SHMT1 | chr 17 | 18240394 | 18240398 | rs66966018 | + | AT | -/ATC | intron | 7 | 1000GENOMES,BILGI_BIOE,DEVINE_LAB,GMI,LUNTER,PJP,SSMP, | 2 | 0.242883 |
SHMT1 | chr 17 | 18266566 | 18266567 | rs672356 | - | G | C/T | intron | 15 | 1000GENOMES,ABI,BCM_SSAHASNP,BGI,BUSHMAN,ENSEMBL,HGSV,HUMANGENOME_JCVI,PERLEGEN,PJP,SC_JCM,SNP500CAN | 2 | 0.800587 |
SHMT1 | chr 17 | 18264448 | 18264449 | rs681998 | + | A | A/G | intron | 15 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_ | 2 | 0.649131 |
SHMT1 | chr 17 | 18253325 | 18253327 | rs71155331 | - | CT | -/AG | intron | 7 | 1000GENOMES,BILGI_BIOE,HUMANGENOME_JCVI,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 0.234862 |
SHMT1 | chr 17 | 18262270 | 18262271 | rs71367444 | + | T | C/T | intron | 3 | 1000GENOMES,HUMANGENOME_JCVI,ILLUMINA, | 2 | 0.019266 |
SHMT1 | chr 17 | 18256503 | 18256505 | rs71885023 | + | TG | -/TG | intron | 5 | 1000GENOMES,DEVINE_LAB,GMI,LUNTER,SSMP, | 2 | 0.231864 |
SHMT1 | chr 17 | 18247361 | 18247362 | rs7207306 | + | C | C/T | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME | 2 | 0.760702 |
SHMT1 | chr 17 | 18260487 | 18260488 | rs7211382 | + | G | A/G | intron | 8 | 1000GENOMES,BCM_SSAHASNP,CSHL-HAPMAP,ENSEMBL,GMI,PJP,SSAHASNP,SSMP, | 2 | 0.243578 |
SHMT1 | chr 17 | 18257543 | 18257544 | rs7215241 | + | T | C/T | intron | 10 | 1000GENOMES,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,PJP,SSMP,TISHKOFF, | 2 | 0.427198 |
SHMT1 | chr 17 | 18236041 | 18236042 | rs7215491 | + | T | C/T | intron | 5 | 1000GENOMES,BCM_SSAHASNP,BUSHMAN,SSMP,TISHKOFF, | 2 | 0.078816 |
SHMT1 | chr 17 | 18245602 | 18245603 | rs7216214 | + | C | C/G | intron | 9 | 1000GENOMES,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF, | 2 | 0.825549 |
SHMT1 | chr 17 | 18245690 | 18245691 | rs7217566 | + | T | C/T | intron | 6 | 1000GENOMES,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,GMI,SSMP, | 2 | 0.17461
|
SHMT1 | chr 17 | 18266491 | 18266492 | rs72561759 | - | G | -/C | intron | 2 | 1000GENOMES,SNP500CANCER, | 2 | 0.022042 |
SHMT1 | chr 17 | 18233739 | 18233740 | rs72561771 | - | G | C/T | intron | 4 | 1000GENOMES,BUSHMAN,SNP500CANCER,TISHKOFF, | 2 | 0.966357 |
SHMT1 | chr 17 | 18266589 | 18266590 | rs72561772 | - | G | C/T | intron | 3 | 1000GENOMES,SNP500CANCER,TISHKOFF, | 2 | 0.986466 |
SHMT1 | chr 17 | 18232977 | 18232978 | rs73291866 | + | G | A/G | intron | 2 | 1000GENOMES,COMPLETE_GENOMICS, | 2 | 0.012385 |
SHMT1 | chr 17 | 18266154 | 18266155 | rs73302997 | + | T | C/T | intron | 2 | 1000GENOMES,COMPLETE_GENOMICS, | 2 | 0.019725 |
SHMT1 | chr 17 | 18235743 | 18235744 | rs74346539 | + | G | A/G | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.012185 |
SHMT1 | chr 17 | 18253274 | 18253275 | rs74792197 | + | G | A/G | intron | 5 | 1000GENOMES,BCM-HGSC-SUB,BGI,COMPLETE_GENOMICS,SSMP, | 2 | 0.127982 |
SHMT1 | chr 17 | 18252231 | 18252232 | rs75158035 | + | G | A/G | intron | 3 | 1000GENOMES,ILLUMINA,TISHKOFF, | 2 | 0.018293 |
SHMT1 | chr 17 | 18256198 | 18256199 | rs75573175 | + | A | A/G | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.981707 |
SHMT1 | chr 17 | 18250192 | 18250193 | rs75785295 | + | T | C/T | intron | 8 | 1000GENOMES,BCM-HGSC-SUB,BGI,COMPLETE_GENOMICS,GMI,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.126606 |
SHMT1 | chr 17 | 18233213 | 18233214 | rs75913225 | + | C | C/T | intron | 2 | 1000GENOMES,COMPLETE_GENOMICS, | 2 | 0.961927 |
SHMT1 | chr 17 | 18261127 | 18261128 | rs75982164 | + | A | A/T | intron | 7 | 1000GENOMES,BCM-HGSC-SUB,BGI,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF, | 2 | 0.872936 |
SHMT1 | chr 17 | 18257650 | 18257651 | rs76303872 | + | T | A/T | intron | 6 | 1000GENOMES,COMPLETE_GENOMICS,ENSEMBL,GMI,SSMP,TISHKOFF, | 2 | 0.21494
|
SHMT1 | chr 17 | 18235402 | 18235403 | rs76970198 | + | G | A/G | intron | 4 | 1000GENOMES,BUSHMAN,SSMP,TISHKOFF, | 2 | 0.073752 |
SHMT1 | chr 17 | 18265228 | 18265229 | rs77062079 | + | A | A/G | intron | 3 | 1000GENOMES,GMI,ILLUMINA, | 2 | 0.989556 |
SHMT1 | chr 17 | 18259090 | 18259091 | rs77117473 | + | C | C/T | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.982578 |
SHMT1 | chr 17 | 18232325 | 18232326 | rs77278763 | + | C | C/T | intron | 3 | 1000GENOMES,GMI,ILLUMINA, | 2 | 0.989556 |
SHMT1 | chr 17 | 18235222 | 18235223 | rs77533320 | + | G | A/G | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.018293 |
SHMT1 | chr 17 | 18247424 | 18247425 | rs77868585 | + | C | C/G | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.981707 |
SHMT1 | chr 17 | 18231731 | 18231732 | rs78310975 | + | A | A/G | near-gene-3,unt | 4 | 1000GENOMES,BUSHMAN,ILLUMINA,TISHKOFF, | 2 | 0.975688 |
SHMT1 | chr 17 | 18254042 | 18254043 | rs78521434 | + | C | C/T | intron | 6 | 1000GENOMES,BCM-HGSC-SUB,BGI,GMI,SSMP,TISHKOFF, | 2 | 0.873423 |
SHMT1 | chr 17 | 18254749 | 18254750 | rs78822685 | + | A | A/G | intron | 3 | 1000GENOMES,BGI,SSMP, | 2 | 0.871442 |
SHMT1 | chr 17 | 18257588 | 18257589 | rs78838233 | + | C | C/T | intron | 6 | 1000GENOMES,COMPLETE_GENOMICS,ENSEMBL,GMI,SSMP,TISHKOFF, | 2 | 0.77681
|
SHMT1 | chr 17 | 18266119 | 18266120 | rs78865288 | + | G | C/G | intron | 3 | 1000GENOMES,ILLUMINA,TISHKOFF, | 2 | 0.041812 |
SHMT1 | chr 17 | 18250454 | 18250455 | rs79109824 | + | G | A/G | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.028388 |
SHMT1 | chr 17 | 18252626 | 18252627 | rs79959344 | + | G | A/G | intron | 6 | 1000GENOMES,BGI,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF, | 2 | 0.126606 |
SHMT1 | chr 17 | 18263570 | 18263571 | rs8067462 | + | C | A/C | intron | 14 | 1000GENOMES,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP | 2 | 0.36318
|
SHMT1 | chr 17 | 18256975 | 18256976 | rs8070162 | + | A | A/G | intron | 9 | 1000GENOMES,BUSHMAN,CLINSEQ_SNP,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PJP,TISHKOFF,WI_SSAHASNP, | 2 | 0.97375
|
SHMT1 | chr 17 | 18241637 | 18241638 | rs8070633 | + | A | A/G | intron | 8 | 1000GENOMES,ABI,ENSEMBL,HGSV,HUMANGENOME_JCVI,PJP,SSMP,WI_SSAHASNP, | 2 | 0.704858 |
SHMT1 | chr 17 | 18254109 | 18254110 | rs8073464 | + | G | A/G | intron | 9 | 1000GENOMES,BCM-HGSC-SUB,GMI,HGSV,HUMANGENOME_JCVI,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.239688 |
SHMT1 | chr 17 | 18254729 | 18254730 | rs8074044 | + | A | A/G | intron | 8 | 1000GENOMES,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,SSMP,WI_SSAHASNP, | 2 | 0.482335 |
SHMT1 | chr 17 | 18258697 | 18258698 | rs8076444 | + | A | A/G | intron | 2 | 1000GENOMES,WI_SSAHASNP, | 2 | 0.98944
|
SHMT1 | chr 17 | 18255565 | 18255566 | rs8080168 | + | T | G/T | intron | 9 | 1000GENOMES,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.290942 |
SHMT1 | chr 17 | 18234027 | 18234028 | rs8080285 | + | T | G/T | intron | 12 | 1000GENOMES,AFFY,BUSHMAN,CLINSEQ_SNP,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,SNP500CANCER,SSMP,TISHK | 2 | 0.077114 |
SHMT1 | chr 17 | 18239546 | 18239547 | rs9893653 | + | C | C/T | intron | 3 | 1000GENOMES,BCM_SSAHASNP,TISHKOFF, | 2 | 0.973829 |
SHMT1 | chr 17 | 18243637 | 18243638 | rs9897954 | + | G | A/G | intron | 7 | 1000GENOMES,BCM_SSAHASNP,BUSHMAN,ILLUMINA,KRIBB_YJKIM,PERLEGEN,TISHKOFF, | 2 | 0.037875 |
SHMT1 | chr 17 | 18252688 | 18252689 | rs9899244 | + | G | A/G | intron | 3 | 1000GENOMES,BCM_SSAHASNP,TISHKOFF, | 2 | 0.023394 |
SHMT1 | chr 17 | 18266531 | 18266532 | rs9900382 | + | C | C/T | intron | 4 | 1000GENOMES,BCM_SSAHASNP,SNP500CANCER,TISHKOFF, | 2 | 0.972222 |
SHMT1 | chr 17 | 18259879 | 18259880 | rs9901707 | + | C | C/G | intron | 10 | 1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,SSMP,TISHKOFF, | 2 | 0.731016 |
SHMT1 | chr 17 | 18231651 | 18231652 | rs9902011 | + | T | C/T | near-gene-3,unt | 6 | 1000GENOMES,BCM_SSAHASNP,BUSHMAN,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.050828 |
SHMT1 | chr 17 | 18249445 | 18249446 | rs9902498 | + | C | C/T | intron | 8 | 1000GENOMES,AFFY,BCM_SSAHASNP,BUSHMAN,ILLUMINA,KRIBB_YJKIM,SSMP,TISHKOFF, | 2 | 0.954593 |
SHMT1 | chr 17 | 18244292 | 18244293 | rs9904323 | + | C | C/G | intron | 6 | 1000GENOMES,BCM_SSAHASNP,BUSHMAN,PERLEGEN,PJP,TISHKOFF, | 2 | 0.969774 |
SHMT1 | chr 17 | 18244682 | 18244683 | rs9905667 | + | G | A/G | intron | 3 | 1000GENOMES,BCM_SSAHASNP,ILLUMINA, | 2 | 0.015151 |
SHMT1 | chr 17 | 18248020 | 18248021 | rs9909104 | + | T | C/T | intron | 16 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA, | 2 | 0.316582 |
SHMT1 | chr 17 | 18250398 | 18250399 | rs9910090 | + | A | A/C | intron | 11 | 1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,PERLEGEN,SSMP,TI | 2 | 0.733163 |
SHMT1 | chr 17 | 18264103 | 18264104 | rs9913022 | + | T | C/T | intron | 4 | 1000GENOMES,BCM_SSAHASNP,ILLUMINA,TISHKOFF, | 2 | 0.02194
|
SHMT1 | chr 17 | 18242036 | 18242037 | rs9915858 | + | C | A/C | intron | 4 | 1000GENOMES,BCM_SSAHASNP,SSMP,TISHKOFF, | 2 | 0.05505
|
SHMT2 | chr 12 | 57626017 | 57626018 | rs11557166 | + | C | C/T | coding-synon,nc | 11 | 1000GENOMES,CGAP-GAI,CLINSEQ_SNP,GMI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,NHLBI-ESP,SEATTLESEQ,SSMP,TISH | 2 | 0.976028 |
SHMT2 | chr 12 | 57628315 | 57628316 | rs11557168 | - | C | A/G | intron,ncRNA,un | 3 | CGAP-GAI,ILLUMINA,KRIBB_YJKIM, | 2 | 0.019608 |
SHMT2 | chr 12 | 57627524 | 57627525 | rs117244382 | + | A | A/G | intron | 5 | 1000GENOMES,BL,CLINSEQ_SNP,ILLUMINA,NHLBI-ESP, | 2 | 0.98028
|
SHMT2 | chr 12 | 57625003 | 57625007 | rs150401480 | + | CC | -/CCT | intron | 6 | 1000GENOMES,BILGI_BIOE,BL,GMI,LUNTER,SSMP, | 2 | 0.589073 |
SHMT2 | chr 12 | 57623361 | 57623361 | rs201782086 | + | - | -/A | near-gene-5,ncR | 1 | 1000GENOMES, | 2 | 0.985308 |
SHMT2 | chr 12 | 57626581 | 57626582 | rs2229716 | + | G | A/G | coding-synon,nc | 11 | 1000GENOMES,BCM-HGSC-SUB,CGAP-GAI,CLINSEQ_SNP,ILLUMINA,KRIBB_YJKIM,MGC_GENOME_DIFF,NHLBI-ESP,PERLEGE | 2 | 0.026497 |
SHMT2 | chr 12 | 57627073 | 57627074 | rs2229717 | + | G | G/T | coding-synon,nc | 9 | 1000GENOMES,APPLERA_GI,CLINSEQ_SNP,GMI,ILLUMINA,NHLBI-ESP,SEATTLESEQ,SSMP,WICVAR, | 2 | 0.951922 |
SHMT2 | chr 12 | 57627861 | 57627862 | rs2229718 | + | C | C/T | coding-synon,nc | 1 | WICVAR, | 2 | 0.962963 |
SHMT2 | chr 12 | 57623362 | 57623363 | rs28365862 | + | A | A/G | near-gene-5,ncR | 8 | 1000GENOMES,BGI,GMI,ILLUMINA,KRIBB_YJKIM,KYUGEN,SSMP,TISHKOFF, | 2 | 0.914863 |
SHMT2 | chr 12 | 57623518 | 57623519 | rs28365863 | + | G | A/G | near-gene-5,ncR | 11 | 1000GENOMES,BUSHMAN,CLINSEQ_SNP,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KYUGEN,NHLBI-ESP,SSMP,TISHKOFF, | 2 | 0.03104
|
SHMT2 | chr 12 | 57627716 | 57627717 | rs34095989 | + | G | A/G | intron | 18 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JC | 2 | 0.331246 |
SHMT2 | chr 12 | 57624700 | 57624701 | rs73338162 | + | C | C/T | ncRNA,missense | 9 | 1000GENOMES,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,EXOME_CHIP,ILLUMINA,NHLBI-ESP,SEATTLESEQ,TISHKOFF, | 2 | 0.970348 |
SHMT2 | chr 12 | 57625949 | 57625950 | rs74093117 | + | G | A/G | intron | 7 | 1000GENOMES,GMI,ILLUMINA,ILLUMINA-UK,NHLBI-ESP,SSMP,TISHKOFF, | 2 | 0.05
|
SHMT2 | chr 12 | 57626443 | 57626444 | rs77260799 | + | C | C/T | intron | 2 | 1000GENOMES,NHLBI-ESP, | 2 | 0.98824
|
SLC19A1 | chr 21 | 46957793 | 46957794 | rs1051266 | - | T | A/G | missense | 27 | 1000GENOMES,ABI,APPLERA_GI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,CGAP-GAI,CLINSEQ_SNP,COMPLETE_GEN | 2 | 0.517813 |
SLC19A1 | chr 21 | 46952005 | 46952006 | rs1051269 | - | G | C/G | coding-synon | 8 | 1000GENOMES,CLINSEQ_SNP,ILLUMINA,KRIBB_YJKIM,LEE,NHLBI-ESP,PHARMGKB_AB_DME,SNP500CANCER, | 2 | 0.99
|
SLC19A1 | chr 21 | 46934860 | 46934861 | rs1051296 | - | A | G/T | untranslated-3 | 22 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BUSHMAN,CGAP-GAI,COMPLETE_GENOMICS,CSHL-HAPMAP | 2 | 0.485282 |
SLC19A1 | chr 21 | 46934825 | 46934826 | rs1051298 | - | G | C/T | untranslated-3 | 22 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL, | 2 | 0.503643 |
SLC19A1 | chr 21 | 46948483 | 46948484 | rs11089010 | + | G | A/G | intron | 19 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,H | 2 | 0.953573 |
SLC19A1 | chr 21 | 46949101 | 46949102 | rs11089011 | + | A | A/G | intron | 15 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JC | 2 | 0.653108 |
SLC19A1 | chr 21 | 46949160 | 46949161 | rs11089012 | + | A | A/G | intron | 17 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMAN | 2 | 0.632877 |
SLC19A1 | chr 21 | 46949209 | 46949210 | rs11089013 | + | T | C/T | intron | 18 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,H | 2 | 0.530482 |
SLC19A1 | chr 21 | 46953327 | 46953328 | rs111516497 | + | C | C/T | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.989001 |
SLC19A1 | chr 21 | 46936180 | 46936181 | rs111734378 | + | C | C/T | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.979816 |
SLC19A1 | chr 21 | 46948195 | 46948197 | rs111912621 | + | AG | -/AG | intron | 3 | 1000GENOMES,BUSHMAN,LUNTER, | 2 | 0.011927 |
SLC19A1 | chr 21 | 46947399 | 46947400 | rs112186387 | + | T | C/T | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,SSMP, | 2 | 0.093119 |
SLC19A1 | chr 21 | 46944862 | 46944863 | rs112628385 | + | G | A/G | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.016514 |
SLC19A1 | chr 21 | 46943160 | 46943161 | rs112710949 | + | C | C/G | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.983486 |
SLC19A1 | chr 21 | 46957518 | 46957519 | rs112728291 | + | A | A/T | intron | 2 | 1000GENOMES,COMPLETE_GENOMICS, | 2 | 0.96422
|
SLC19A1 | chr 21 | 46952923 | 46952925 | rs112808849 | + | TG | -/TG | intron | 2 | 1000GENOMES,BUSHMAN, | 2 | 0.335321 |
SLC19A1 | chr 21 | 46961834 | 46961835 | rs112870937 | + | T | A/T | intron | 2 | 1000GENOMES,COMPLETE_GENOMICS, | 2 | 0.023394 |
SLC19A1 | chr 21 | 46947098 | 46947099 | rs113157560 | + | T | -/T | intron | 3 | 1000GENOMES,BUSHMAN,LUNTER, | 2 | 0.033486 |
SLC19A1 | chr 21 | 46957915 | 46957916 | rs1131596 | - | G | A/C/G | untranslated-5 | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JC | 4 | 0.00024
|
SLC19A1 | chr 21 | 46957637 | 46957638 | rs113682200 | + | G | A/G | intron | 3 | 1000GENOMES,BCM-HGSC-SUB,MPI_MOLGEN, | 2 | 0.038567 |
SLC19A1 | chr 21 | 46939797 | 46939798 | rs114252827 | + | G | A/G | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.014808 |
SLC19A1 | chr 21 | 46953762 | 46953763 | rs114274148 | + | G | C/G | intron | 3 | 1000GENOMES,SSMP,TISHKOFF, | 2 | 0.013066 |
SLC19A1 | chr 21 | 46952132 | 46952133 | rs114821394 | + | G | A/G | intron | 3 | 1000GENOMES,SSMP,TISHKOFF, | 2 | 0.01176
|
SLC19A1 | chr 21 | 46947755 | 46947756 | rs115386733 | + | C | C/G | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.989983 |
SLC19A1 | chr 21 | 46957606 | 46957607 | rs115481010 | + | G | A/G | intron | 1 | 1000GENOMES, | 2 | 0.168046 |
SLC19A1 | chr 21 | 46939931 | 46939932 | rs116433034 | + | C | A/C | intron | 1 | 1000GENOMES, | 2 | 0.015679 |
SLC19A1 | chr 21 | 46949353 | 46949354 | rs11701436 | + | T | A/T | intron | 15 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JC | 2 | 0.525285 |
SLC19A1 | chr 21 | 46955882 | 46955883 | rs11702537 | + | G | A/G | intron,near-gen | 13 | 1000GENOMES,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SS | 2 | 0.486758 |
SLC19A1 | chr 21 | 46946094 | 46946095 | rs117302755 | + | G | A/G | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.01262
|
SLC19A1 | chr 21 | 46940656 | 46940657 | rs118127630 | + | G | A/G | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.011314 |
SLC19A1 | chr 21 | 46953848 | 46953849 | rs118175016 | + | A | A/G | intron | 1 | 1000GENOMES, | 2 | 0.980418 |
SLC19A1 | chr 21 | 46935160 | 46935161 | rs12106284 | + | C | C/T | intron,untransl | 6 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA,KRIBB_YJKIM,SC_SNP,TISHKOFF, | 2 | 0.950674 |
SLC19A1 | chr 21 | 46935399 | 46935400 | rs12329692 | + | G | A/G | intron,untransl | 5 | 1000GENOMES,ILLUMINA,SC_SNP,SSMP,TISHKOFF, | 2 | 0.011162 |
SLC19A1 | chr 21 | 46937626 | 46937627 | rs12482346 | + | C | C/T | intron | 16 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,ILL | 2 | 0.492201 |
SLC19A1 | chr 21 | 46951555 | 46951556 | rs12659 | - | A | C/T | coding-synon | 27 | 1000GENOMES,ABI,APPLERA_GI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,CGAP-GAI,CLINSEQ_SNP,COMPLETE_GEN | 2 | 0.560144 |
SLC19A1 | chr 21 | 46960894 | 46960895 | rs13050920 | + | C | C/T | intron | 15 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,PJP,SSAH | 2 | 0.660714 |
SLC19A1 | chr 21 | 46957981 | 46957982 | rs13052294 | + | G | A/G | intron | 16 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,CHURCH_CG54K,COMPLETE_GENOMICS,ENSEMBL,GMI,H | 2 | 0.49251
|
SLC19A1 | chr 21 | 46951134 | 46951135 | rs13052709 | + | G | G/T | intron | 3 | 1000GENOMES,BCM-HGSC-SUB,SSAHASNP, | 2 | 0.94123
|
SLC19A1 | chr 21 | 46958633 | 46958635 | rs141627073 | + | CT | -/CT | intron | 3 | 1000GENOMES,LUNTER,SSMP, | 2 | 0.016988 |
SLC19A1 | chr 21 | 46937562 | 46937567 | rs142342863 | + | CC | -/CCT | intron | 6 | 1000GENOMES,GMI,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 0.536272 |
SLC19A1 | chr 21 | 46953318 | 46953328 | rs145618765 | + | TG | -/TGG | intron | 2 | 1000GENOMES,LUNTER, | 2 | 0.011019 |
SLC19A1 | chr 21 | 46936581 | 46936582 | rs147693836 | + | G | A/G | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.012397 |
SLC19A1 | chr 21 | 46940704 | 46940705 | rs148212431 | + | C | C/T | intron | 1 | 1000GENOMES, | 2 | 0.988522 |
SLC19A1 | chr 21 | 46959950 | 46959951 | rs149955546 | + | C | C/T | intron | 1 | 1000GENOMES, | 2 | 0.989899 |
SLC19A1 | chr 21 | 46958003 | 46958003 | rs150492570 | + | - | -/CCT | cds-indel | 4 | 1000GENOMES,BILGI_BIOE,BL,LUNTER, | 2 | 0.469697 |
SLC19A1 | chr 21 | 46956638 | 46956640 | rs151127531 | + | AG | -/AG | intron | 4 | 1000GENOMES,LUNTER,SSMP,TISHKOFF, | 2 | 0.01056
|
SLC19A1 | chr 21 | 46939256 | 46939257 | rs151270761 | + | T | C/T | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.013774 |
SLC19A1 | chr 21 | 46951078 | 46951079 | rs181266423 | + | G | C/G | intron | 1 | 1000GENOMES, | 2 | 0.146006 |
SLC19A1 | chr 21 | 46951122 | 46951123 | rs181825494 | + | G | C/G | intron | 1 | 1000GENOMES, | 2 | 0.500918 |
SLC19A1 | chr 21 | 46957450 | 46957451 | rs182723376 | + | C | A/C | intron | 1 | 1000GENOMES, | 2 | 0.010101 |
SLC19A1 | chr 21 | 46957369 | 46957370 | rs182824086 | + | A | A/C | intron | 1 | 1000GENOMES, | 2 | 0.948577 |
SLC19A1 | chr 21 | 46951046 | 46951047 | rs183644378 | + | G | G/T | intron | 1 | 1000GENOMES, | 2 | 0.895317 |
SLC19A1 | chr 21 | 46951116 | 46951117 | rs184599073 | + | C | A/C | intron | 1 | 1000GENOMES, | 2 | 0.514692 |
SLC19A1 | chr 21 | 46951072 | 46951073 | rs187964039 | + | C | A/C | intron | 1 | 1000GENOMES, | 2 | 0.512397 |
SLC19A1 | chr 21 | 46957497 | 46957498 | rs188627508 | + | A | A/C | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.938935 |
SLC19A1 | chr 21 | 46936262 | 46936263 | rs1888529 | + | G | C/G | intron | 15 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA-UK,PJP,SSMP,TISH | 2 | 0.46758
|
SLC19A1 | chr 21 | 46936422 | 46936423 | rs1888530 | + | C | C/T | intron | 21 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV, | 2 | 0.445059 |
SLC19A1 | chr 21 | 46952410 | 46952411 | rs1888531 | + | G | C/G | intron | 17 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANG | 2 | 0.484931 |
SLC19A1 | chr 21 | 46952549 | 46952550 | rs1888532 | + | T | C/T | intron | 14 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SC_JCM,SSA | 2 | 0.404392 |
SLC19A1 | chr 21 | 46952366 | 46952367 | rs189723953 | + | G | A/G | intron | 1 | 1000GENOMES, | 2 | 0.010101 |
SLC19A1 | chr 21 | 46951121 | 46951122 | rs189773043 | + | A | A/G | intron | 1 | 1000GENOMES, | 2 | 0.434343 |
SLC19A1 | chr 21 | 46957508 | 46957509 | rs192273169 | + | G | A/G | intron | 1 | 1000GENOMES, | 2 | 0.05877
|
SLC19A1 | chr 21 | 46957470 | 46957471 | rs192752552 | + | C | C/T | intron | 1 | 1000GENOMES, | 2 | 0.979798 |
SLC19A1 | chr 21 | 46950737 | 46950738 | rs199761250 | + | T | C/T | missense | 1 | 1000GENOMES, | 2 | 0.016988 |
SLC19A1 | chr 21 | 46960856 | 46960857 | rs2010540 | - | A | C/T | intron | 8 | 1000GENOMES,ABI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 2 | 0.048146 |
SLC19A1 | chr 21 | 46940948 | 46940949 | rs201254807 | + | C | -/C | intron | 1 | 1000GENOMES, | 2 | 0.092286 |
SLC19A1 | chr 21 | 46960790 | 46960792 | rs201778978 | + | CT | -/CT | intron | 1 | 1000GENOMES, | 2 | 0.027089 |
SLC19A1 | chr 21 | 46945968 | 46945969 | rs2039276 | + | G | G/T | intron | 6 | 1000GENOMES,ABI,CGM_KYOTO,ILLUMINA,PHARMGKB_PMT,TSC-CSHL, | 2 | 0.989459 |
SLC19A1 | chr 21 | 46948023 | 46948024 | rs2039277 | + | A | A/G | intron | 16 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,H | 2 | 0.494991 |
SLC19A1 | chr 21 | 46948027 | 46948028 | rs2039278 | + | C | C/G | intron | 16 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,H | 2 | 0.498179 |
SLC19A1 | chr 21 | 46945339 | 46945340 | rs2297291 | + | A | A/G | intron | 19 | 1000GENOMES,ABI,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLU | 2 | 0.479401 |
SLC19A1 | chr 21 | 46957507 | 46957508 | rs2297292 | + | C | C/T | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,SSMP,YUSUKE, | 2 | 0.89295
|
SLC19A1 | chr 21 | 46953291 | 46953292 | rs2330183 | + | C | C/T | intron | 23 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,G | 2 | 0.527464 |
SLC19A1 | chr 21 | 46954342 | 46954343 | rs2330184 | + | T | C/T | intron | 21 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,HGSV,H | 2 | 0.666515 |
SLC19A1 | chr 21 | 46945023 | 46945024 | rs2838956 | + | A | A/G | intron | 18 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMIN | 2 | 0.48872
|
SLC19A1 | chr 21 | 46948522 | 46948523 | rs2838957 | + | A | A/G | intron | 22 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,G | 2 | 0.503904 |
SLC19A1 | chr 21 | 46948566 | 46948567 | rs2838958 | + | G | A/G | intron | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMAN | 2 | 0.401154 |
SLC19A1 | chr 21 | 46946296 | 46946297 | rs28413786 | + | A | A/G | intron | 7 | 1000GENOMES,COMPLETE_GENOMICS,HGSV,ILLUMINA,ILLUMINA-UK,SSAHASNP,TISHKOFF, | 2 | 0.972095 |
SLC19A1 | chr 21 | 46936406 | 46936407 | rs28448590 | + | T | A/T | intron | 6 | 1000GENOMES,BUSHMAN,HGSV,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.011436 |
SLC19A1 | chr 21 | 46937045 | 46937046 | rs28568291 | + | C | C/T | intron | 4 | 1000GENOMES,ILLUMINA-UK,SSAHASNP,TISHKOFF, | 2 | 0.988991 |
SLC19A1 | chr 21 | 46950167 | 46950168 | rs28627372 | + | C | C/T | intron | 8 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,HGSV,ILLUMINA,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.951052 |
SLC19A1 | chr 21 | 46948102 | 46948103 | rs28722137 | + | C | C/T | intron | 3 | 1000GENOMES,SSAHASNP,TISHKOFF, | 2 | 0.989111 |
SLC19A1 | chr 21 | 46950084 | 46950085 | rs28756113 | + | G | A/C/G | intron | 6 | 1000GENOMES,HGSV,ILLUMINA,SSAHASNP,SSMP,TISHKOFF, | 3 | 0.010541 |
SLC19A1 | chr 21 | 46939025 | 46939025 | rs3028039 | + | - | -/AAG | intron | 7 | 1000GENOMES,BCMHGSC_JDW,GMI,HGSV,LUNTER,TISHKOFF,TSC-CSHL, | 2 | 0.475666 |
SLC19A1 | chr 21 | 46934790 | 46934791 | rs35764705 | - | A | C/T | untranslated-3 | 3 | 1000GENOMES,SNP500CANCER,TISHKOFF, | 2 | 0.010098 |
SLC19A1 | chr 21 | 46935674 | 46935675 | rs35786590 | - | G | C/T | intron,missense | 3 | APPLERA_GI,ILLUMINA,PERLEGEN, | 2 | 0.928571 |
SLC19A1 | chr 21 | 46935342 | 46935342 | rs35978794 | + | - | -/C | intron,untransl | 10 | 1000GENOMES,ABI,BUSHMAN,DEVINE_LAB,GMI,HGSV,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 0.470642 |
SLC19A1 | chr 21 | 46936582 | 46936583 | rs3788189 | + | T | G/T | intron | 15 | 1000GENOMES,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP,S | 2 | 0.535872 |
SLC19A1 | chr 21 | 46936957 | 46936958 | rs3788190 | + | G | A/G | intron | 17 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,ILLUMINA-UK, | 2 | 0.488707 |
SLC19A1 | chr 21 | 46936979 | 46936980 | rs3788191 | + | A | A/G | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA-UK,PJP,SC | 2 | 0.475171 |
SLC19A1 | chr 21 | 46956417 | 46956418 | rs3788199 | + | A | A/G | intron,near-gen | 17 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JC | 2 | 0.509348 |
SLC19A1 | chr 21 | 46956570 | 46956571 | rs3788200 | + | A | A/G | intron | 20 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOM | 2 | 0.49952
|
SLC19A1 | chr 21 | 46956759 | 46956760 | rs3788201 | + | C | C/T | intron | 17 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,IL | 2 | 0.510474 |
SLC19A1 | chr 21 | 46957217 | 46957218 | rs3788202 | + | A | A/G | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JC | 2 | 0.252511 |
SLC19A1 | chr 21 | 46958585 | 46958586 | rs3788203 | + | T | G/T | intron | 19 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENO | 2 | 0.50604
|
SLC19A1 | chr 21 | 46956385 | 46956386 | rs3827265 | + | G | A/G | intron,near-gen | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,H | 2 | 0.476277 |
SLC19A1 | chr 21 | 46961902 | 46961903 | rs4311136 | + | G | C/G | intron | 10 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,COMPLETE_GENOMICS,DEVINE_LAB,ENSEMBL,PJP,SC_JCM,SSMP, | 2 | 0.35348
|
SLC19A1 | chr 21 | 46936486 | 46936487 | rs4818786 | + | G | A/G | intron | 8 | 1000GENOMES,ABI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,ILLUMINA,SSMP,WI_SSAHASNP, | 2 | 0.055759 |
SLC19A1 | chr 21 | 46947499 | 46947500 | rs4818788 | + | A | A/C | intron | 4 | 1000GENOMES,SSAHASNP,SSMP,WI_SSAHASNP, | 2 | 0.896694 |
SLC19A1 | chr 21 | 46948826 | 46948827 | rs4818789 | + | G | G/T | intron | 19 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENO | 2 | 0.196544 |
SLC19A1 | chr 21 | 46959978 | 46959979 | rs4818790 | + | T | C/T | intron | 19 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENO | 2 | 0.539516 |
SLC19A1 | chr 21 | 46947508 | 46947509 | rs4819127 | + | T | C/T | intron | 4 | 1000GENOMES,SSAHASNP,SSMP,WI_SSAHASNP, | 2 | 0.05877
|
SLC19A1 | chr 21 | 46949648 | 46949649 | rs4819128 | + | C | C/T | intron | 15 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,COMPLETE_GENOMICS,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_ | 2 | 0.543373 |
SLC19A1 | chr 21 | 46949676 | 46949677 | rs4819129 | + | G | A/G | intron | 10 | 1000GENOMES,ABI,BCMHGSC_JDW,GMI,HGSV,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.480716 |
SLC19A1 | chr 21 | 46958298 | 46958299 | rs4819130 | + | C | C/T | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JC | 2 | 0.544252 |
SLC19A1 | chr 21 | 46945520 | 46945521 | rs55783555 | + | G | A/G | intron | 3 | 1000GENOMES,CGM_KYOTO,SSMP, | 2 | 0.016536 |
SLC19A1 | chr 21 | 46950862 | 46951331 | rs56138890 | - | CG | A/G | unknown | 2 | PHARMGKB_PMT,THELMABK, | 2 | 0.148936 |
SLC19A1 | chr 21 | 46948008 | 46948009 | rs57287584 | + | C | C/G | intron | 4 | 1000GENOMES,HGSV,ILLUMINA-UK,TISHKOFF, | 2 | 0.972018 |
SLC19A1 | chr 21 | 46957522 | 46957523 | rs57628728 | + | A | A/G | intron | 7 | 1000GENOMES,BCMHGSC_JDW,COMPLETE_GENOMICS,ENSEMBL,HGSV,HUMANGENOME_JCVI,SSMP, | 2 | 0.545247 |
SLC19A1 | chr 21 | 46945614 | 46945615 | rs58179495 | - | G | C/T | intron | 4 | 1000GENOMES,BGI,PHARMGKB_PMT,SSMP, | 2 | 0.984615 |
SLC19A1 | chr 21 | 46952536 | 46952537 | rs5844241 | + | G | -/G | intron | 10 | 1000GENOMES,ABI,BILGI_BIOE,BL,DEVINE_LAB,HUMANGENOME_JCVI,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 0.392202 |
SLC19A1 | chr 21 | 46938547 | 46938548 | rs58762897 | + | C | C/T | intron | 4 | 1000GENOMES,HGSV,ILLUMINA,PJP, | 2 | 0.977372 |
SLC19A1 | chr 21 | 46957477 | 46957478 | rs59518647 | + | A | A/G | intron | 5 | 1000GENOMES,BCMHGSC_JDW,ENSEMBL,HGSV,SSMP, | 2 | 0.926673 |
SLC19A1 | chr 21 | 46946402 | 46946403 | rs59679723 | + | C | -/C | intron | 5 | 1000GENOMES,DEVINE_LAB,HGSV,LUNTER,TISHKOFF, | 2 | 0.026171 |
SLC19A1 | chr 21 | 46939301 | 46939302 | rs60420734 | + | G | C/G | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,HGSV,ILLUMINA-UK, | 2 | 0.015582 |
SLC19A1 | chr 21 | 46961495 | 46961496 | rs60881836 | + | T | C/T | intron | 5 | 1000GENOMES,AFFY_DM3_1,PHARMGKB_AB_DME,SNP500CANCER,TISHKOFF, | 2 | 0.019647 |
SLC19A1 | chr 21 | 46950494 | 46950495 | rs61691989 | - | C | A/G | intron | 5 | 1000GENOMES,HGSV,PHARMGKB_PMT,SSMP,TISHKOFF, | 2 | 0.01019
|
SLC19A1 | chr 21 | 46957412 | 46957413 | rs62214295 | + | T | C/T | intron | 4 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,ENSEMBL, | 2 | 0.063761 |
SLC19A1 | chr 21 | 46957419 | 46957420 | rs62214296 | + | A | A/G | intron | 3 | 1000GENOMES,BCMHGSC_JDW,ENSEMBL, | 2 | 0.952752 |
SLC19A1 | chr 21 | 46957466 | 46957467 | rs62214298 | + | G | A/G | intron | 4 | 1000GENOMES,BCMHGSC_JDW,ENSEMBL,SSMP, | 2 | 0.05912
|
SLC19A1 | chr 21 | 46947564 | 46947565 | rs63510360 | + | T | C/T | intron | 5 | 1000GENOMES,BCMHGSC_JDW,BL,COMPLETE_GENOMICS,SSMP, | 2 | 0.383486 |
SLC19A1 | chr 21 | 46950145 | 46950147 | rs71808010 | + | GT | -/GT | intron | 3 | 1000GENOMES,DEVINE_LAB,SSMP, | 2 | 0.016988 |
SLC19A1 | chr 21 | 46940523 | 46940524 | rs7278332 | + | A | A/G | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUM | 2 | 0.515732 |
SLC19A1 | chr 21 | 46941643 | 46941644 | rs7278430 | + | T | C/T | intron | 4 | 1000GENOMES,BCM_SSAHASNP,SSMP,TISHKOFF, | 2 | 0.011324 |
SLC19A1 | chr 21 | 46935941 | 46935942 | rs7278825 | + | G | A/G | intron,missense | 9 | 1000GENOMES,BCM_SSAHASNP,EXOME_CHIP,ILLUMINA,NHLBI-ESP,PHARMGKB_PMT,SEATTLESEQ,SSMP,TISHKOFF, | 2 | 0.012385 |
SLC19A1 | chr 21 | 46936119 | 46936120 | rs73370896 | + | C | C/T | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.980275 |
SLC19A1 | chr 21 | 46936797 | 46936798 | rs73370901 | + | A | A/G | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.980734 |
SLC19A1 | chr 21 | 46937208 | 46937209 | rs73372904 | + | C | C/T | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.980734 |
SLC19A1 | chr 21 | 46937871 | 46937872 | rs73372908 | + | C | C/G | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.980734 |
SLC19A1 | chr 21 | 46941095 | 46941096 | rs73372917 | + | C | C/T | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.983486 |
SLC19A1 | chr 21 | 46942264 | 46942265 | rs73372920 | + | A | A/G | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.983486 |
SLC19A1 | chr 21 | 46943027 | 46943028 | rs73372923 | + | C | C/T | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.983486 |
SLC19A1 | chr 21 | 46948243 | 46948244 | rs73372934 | + | G | C/G | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.017431 |
SLC19A1 | chr 21 | 46950298 | 46950299 | rs73372947 | + | C | A/C/T | intron | 5 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,ILLUMINA-UK,TISHKOFF, | 3 | 0.021978 |
SLC19A1 | chr 21 | 46948473 | 46948474 | rs73907590 | + | G | A/G | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA-UK, | 2 | 0.010541 |
SLC19A1 | chr 21 | 46959770 | 46959771 | rs73907602 | + | A | A/G | intron | 4 | 1000GENOMES,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.918807 |
SLC19A1 | chr 21 | 46952926 | 46952927 | rs7509663 | + | G | A/G | intron | 11 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,ENSEMBL,GMI,PJP,SC_JCM,SSAHASNP,SSMP, | 2 | 0.451421 |
SLC19A1 | chr 21 | 46952925 | 46952926 | rs7510226 | + | T | C/T | intron | 13 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,ENSEMBL,GMI,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.471127 |
SLC19A1 | chr 21 | 46954446 | 46954447 | rs75217254 | + | C | C/T | intron | 3 | 1000GENOMES,SSMP,TISHKOFF, | 2 | 0.983885 |
SLC19A1 | chr 21 | 46942987 | 46942987 | rs77458289 | + | - | -/A | intron | 5 | 1000GENOMES,GMI,LUNTER,SSMP,TISHKOFF, | 2 | 0.525712 |
SLC19A1 | chr 21 | 46955449 | 46955450 | rs77881597 | + | G | A/G | intron,near-gen | 4 | 1000GENOMES,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.011324 |
SLC19A1 | chr 21 | 46960483 | 46960484 | rs78980934 | + | C | C/G | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.983885 |
SLC19A1 | chr 21 | 46950862 | 46950863 | rs79091853 | + | C | C/T | coding-synon | 5 | 1000GENOMES,CLINSEQ_SNP,ILLUMINA,NHLBI-ESP,SSMP, | 2 | 0.981272 |
SLC19A1 | chr 21 | 46941049 | 46941050 | rs79382493 | + | A | A/C | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA-UK, | 2 | 0.984418 |
SLC19A1 | chr 21 | 46936186 | 46936187 | rs79577186 | + | G | A/G | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.019266 |
SLC19A1 | chr 21 | 46960597 | 46960598 | rs79701880 | + | C | C/T | intron | 5 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.950459 |
SLC19A1 | chr 21 | 46956684 | 46956685 | rs79819531 | + | C | C/T | intron | 4 | 1000GENOMES,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.98944
|
SLC19A1 | chr 21 | 46941441 | 46941442 | rs80301613 | + | T | C/T | intron | 1 | 1000GENOMES, | 2 | 0.011749 |
SLC19A1 | chr 21 | 46952093 | 46952094 | rs914231 | + | T | C/T | intron | 20 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMB | 2 | 0.499016 |
SLC19A1 | chr 21 | 46952749 | 46952750 | rs914232 | + | T | C/T | intron | 19 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENO | 4 | 0.004416 |
SLC19A1 | chr 21 | 46941976 | 46941977 | rs9306132 | + | T | C/T | intron | 13 | 1000GENOMES,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA-UK,PJP,SSMP,TI | 2 | 0.509822 |
SLC19A1 | chr 21 | 46943697 | 46943698 | rs9306133 | + | C | C/T | intron | 7 | 1000GENOMES,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,ILLUMINA-UK,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.971638 |
SLC19A1 | chr 21 | 46943702 | 46943703 | rs9306134 | + | A | A/G | intron | 7 | 1000GENOMES,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,ILLUMINA-UK,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.971638 |
SLC19A1 | chr 21 | 46937278 | 46937279 | rs9647238 | + | C | C/T | intron | 8 | 1000GENOMES,BCMHGSC_JDW,BUSHMAN,ENSEMBL,ILLUMINA,SC_SNP,SSMP,TISHKOFF, | 2 | 0.870421 |
SLC19A1 | chr 21 | 46947086 | 46947087 | rs965933 | + | G | A/G | intron | 16 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SC_SN | 2 | 0.474382 |
SLC19A1 | chr 21 | 46952995 | 46952996 | rs9974325 | + | G | A/G | intron | 4 | 1000GENOMES,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.01176
|
SLC19A1 | chr 21 | 46940762 | 46940763 | rs9975958 | + | C | C/T | intron | 4 | 1000GENOMES,HGSV,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.98578
|
SLC19A1 | chr 21 | 46940837 | 46940838 | rs9976313 | + | A | A/G | intron | 10 | 1000GENOMES,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.491541 |
SLC19A1 | chr 21 | 46959178 | 46959179 | rs9976727 | + | G | A/G | intron | 16 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JC | 2 | 0.471448 |
SLC19A1 | chr 21 | 46959086 | 46959087 | rs9977610 | + | A | A/G | intron | 18 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUM | 2 | 0.513079 |
SLC19A1 | chr 21 | 46942011 | 46942012 | rs9979328 | + | C | C/G | intron | 4 | 1000GENOMES,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.988676 |
SLC19A1 | chr 21 | 46945469 | 46945470 | rs9980386 | + | C | C/T | intron | 8 | 1000GENOMES,BUSHMAN,HGSV,ILLUMINA,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.971638 |
SLC19A1 | chr 21 | 46960280 | 46960281 | rs9982270 | + | G | G/T | intron | 7 | 1000GENOMES,BUSHMAN,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.989963 |
SLC19A1 | chr 21 | 46942370 | 46942371 | rs9982301 | + | A | A/G | intron | 14 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP, | 2 | 0.476038 |
SLC19A1 | chr 21 | 46943405 | 46943406 | rs9984404 | + | G | A/G | intron | 6 | 1000GENOMES,BUSHMAN,ILLUMINA,ILLUMINA-UK,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.01007
|
SLC19A1 | chr 21 | 46943451 | 46943452 | rs9984419 | + | G | A/G | intron | 6 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,ILLUMINA-UK,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.029762 |
SLC19A1 | chr 21 | 46955603 | 46955604 | rs9984436 | + | A | A/G | intron,near-gen | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HU | 2 | 0.478122 |
SLC25A32 | chr 8 | 104412829 | 104412830 | rs10103739 | + | C | C/T | intron | 10 | 1000GENOMES,ABI,BUSHMAN,ENSEMBL,HUMANGENOME_JCVI,ILLUMINA,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.943707 |
SLC25A32 | chr 8 | 104411281 | 104411282 | rs1061195 | - | T | A/G | ncRNA,untransla | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,CGAP-GAI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_J | 2 | 0.733364 |
SLC25A32 | chr 8 | 104410927 | 104410928 | rs1061196 | - | C | A/G | ncRNA,untransla | 14 | 1000GENOMES,BCM_SSAHASNP,BL,BUSHMAN,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,LEE,PERLEGEN,P | 2 | 0.190239 |
SLC25A32 | chr 8 | 104411076 | 104411081 | rs111398011 | + | AT | -/ATA | ncRNA,untransla | 6 | 1000GENOMES,BILGI_BIOE,BUSHMAN,GMI,LUNTER,SSMP, | 2 | 0.173853 |
SLC25A32 | chr 8 | 104412474 | 104412475 | rs11345830 | + | A | -/A | ncRNA,untransla | 13 | 1000GENOMES,BGI,BILGI_BIOE,BL,BUSHMAN,DEVINE_LAB,GMI,HGSV,HUMANGENOME_JCVI,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 1
|
SLC25A32 | chr 8 | 104414660 | 104414661 | rs114488433 | + | G | A/G | intron | 1 | 1000GENOMES, | 2 | 0.013066 |
SLC25A32 | chr 8 | 104425879 | 104425880 | rs115361595 | + | A | A/G | intron,near-gen | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.987369 |
SLC25A32 | chr 8 | 104413733 | 104413734 | rs115968673 | + | G | G/T | intron | 5 | 1000GENOMES,CLINSEQ_SNP,ILLUMINA,NHLBI-ESP,TISHKOFF, | 2 | 0.976508 |
SLC25A32 | chr 8 | 104418192 | 104418193 | rs117357669 | + | G | A/G | intron | 1 | 1000GENOMES, | 2 | 0.033507 |
SLC25A32 | chr 8 | 104413500 | 104413501 | rs117366417 | + | C | C/T | intron | 1 | 1000GENOMES, | 2 | 0.966928 |
SLC25A32 | chr 8 | 104414337 | 104414338 | rs117399628 | + | T | C/T | intron | 1 | 1000GENOMES, | 2 | 0.032202 |
SLC25A32 | chr 8 | 104416529 | 104416530 | rs117499883 | + | A | A/G | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.983464 |
SLC25A32 | chr 8 | 104415694 | 104415695 | rs117846978 | + | T | C/T | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.01262
|
SLC25A32 | chr 8 | 104423172 | 104423173 | rs117849763 | + | G | A/G | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.033507 |
SLC25A32 | chr 8 | 104423010 | 104423011 | rs118081385 | + | G | A/G | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.01349
|
SLC25A32 | chr 8 | 104411057 | 104411058 | rs12546452 | + | A | A/C | ncRNA,untransla | 5 | 1000GENOMES,ABI,CSHL-HAPMAP,ENSEMBL,SSMP, | 2 | 0.982585 |
SLC25A32 | chr 8 | 104418294 | 104418295 | rs13272915 | + | A | A/G | intron | 10 | 1000GENOMES,BCM-HGSC-SUB,BGI,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP, | 2 | 0.668801 |
SLC25A32 | chr 8 | 104420108 | 104420109 | rs138160805 | + | T | C/T | intron | 1 | 1000GENOMES, | 2 | 0.032599 |
SLC25A32 | chr 8 | 104421447 | 104421462 | rs138664135 | + | AT | -/ATA | intron | 3 | 1000GENOMES,BILGI_BIOE,LUNTER, | 2 | 0.168962 |
SLC25A32 | chr 8 | 104419143 | 104419144 | rs142337299 | + | A | A/C | intron | 1 | 1000GENOMES, | 2 | 0.988522 |
SLC25A32 | chr 8 | 104416020 | 104416021 | rs147119462 | + | T | C/T | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.016529 |
SLC25A32 | chr 8 | 104412150 | 104412151 | rs148028640 | + | A | A/T | ncRNA,untransla | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.986685 |
SLC25A32 | chr 8 | 104416251 | 104416252 | rs17228841 | + | T | C/T | intron | 2 | 1000GENOMES,PERLEGEN, | 2 | 0.03414
|
SLC25A32 | chr 8 | 104417044 | 104417045 | rs17803441 | + | C | C/T | intron,ncRNA,mi | 9 | 1000GENOMES,AFFY,APPLERA_GI,CLINSEQ_SNP,EXOME_CHIP,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN, | 2 | 0.952397 |
SLC25A32 | chr 8 | 104416692 | 104416693 | rs1865853 | + | C | C/T | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENO | 2 | 0.734396 |
SLC25A32 | chr 8 | 104416784 | 104416785 | rs1865854 | + | C | C/T | intron | 17 | 1000GENOMES,ABI,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,S | 2 | 0.733607 |
SLC25A32 | chr 8 | 104416832 | 104416833 | rs1865855 | + | A | A/C | intron | 15 | 1000GENOMES,ABI,BCM-HGSC-SUB,BL,BUSHMAN,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PJP,S | 2 | 0.690141 |
SLC25A32 | chr 8 | 104420160 | 104420160 | rs200282193 | + | - | -/TA | intron | 1 | 1000GENOMES, | 2 | 0.988981 |
SLC25A32 | chr 8 | 104417890 | 104417890 | rs201957062 | + | - | -/A | intron | 1 | 1000GENOMES, | 2 | 0.988981 |
SLC25A32 | chr 8 | 104414437 | 104414438 | rs2118058 | + | G | A/G | intron | 4 | 1000GENOMES,ABI,SC_JCM,TSC-CSHL, | 2 | 0.012631 |
SLC25A32 | chr 8 | 104412387 | 104412388 | rs2241777 | + | C | A/C | ncRNA,untransla | 23 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,CGAP-GAI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV, | 2 | 0.455525 |
SLC25A32 | chr 8 | 104412934 | 104412935 | rs2241778 | + | C | C/T | intron | 22 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENO | 2 | 0.551762 |
SLC25A32 | chr 8 | 104426530 | 104426531 | rs28630640 | + | C | C/T | intron,near-gen | 10 | 1000GENOMES,ABI,BL,ENSEMBL,HUMANGENOME_JCVI,ILLUMINA,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.943681 |
SLC25A32 | chr 8 | 104425303 | 104425304 | rs3098241 | - | A | C/T | intron,near-gen | 18 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMIN | 2 | 0.216899 |
SLC25A32 | chr 8 | 104424390 | 104424391 | rs3098242 | - | G | C/T | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLU | 2 | 0.549943 |
SLC25A32 | chr 8 | 104422570 | 104422571 | rs3098243 | - | A | C/T | intron | 17 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JC | 2 | 0.449408 |
SLC25A32 | chr 8 | 104421327 | 104421328 | rs3098244 | - | G | C/T | intron | 16 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLU | 2 | 0.764751 |
SLC25A32 | chr 8 | 104420291 | 104420292 | rs3098245 | - | G | C/T | intron | 9 | 1000GENOMES,ABI,BCM-HGSC-SUB,ENSEMBL,HGSV,HUMANGENOME_JCVI,PJP,SC_JCM,SSMP, | 2 | 0.788919 |
SLC25A32 | chr 8 | 104413379 | 104413380 | rs3098260 | + | A | A/C | intron | 17 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI, | 2 | 0.787691 |
SLC25A32 | chr 8 | 104414674 | 104414675 | rs3133809 | + | A | A/G | intron | 16 | 1000GENOMES,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI | 2 | 0.550228 |
SLC25A32 | chr 8 | 104415117 | 104415118 | rs3133810 | + | C | C/T | intron | 11 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BL,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SC_JCM,SSMP, | 2 | 0.904344 |
SLC25A32 | chr 8 | 104417349 | 104417350 | rs3133811 | + | A | A/G | intron | 17 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_ | 2 | 0.733607 |
SLC25A32 | chr 8 | 104419441 | 104419442 | rs3133813 | + | T | C/T | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA, | 2 | 0.261276 |
SLC25A32 | chr 8 | 104421719 | 104421720 | rs3133814 | + | A | A/G | intron | 13 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK, | 2 | 0.732109 |
SLC25A32 | chr 8 | 104422853 | 104422854 | rs3133815 | + | A | A/G | intron | 12 | 1000GENOMES,ABI,BGI,BL,COMPLETE_GENOMICS,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_JCM,SSMP,TISHKOFF, | 2 | 0.735133 |
SLC25A32 | chr 8 | 104424336 | 104424337 | rs3133816 | + | C | C/G | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLU | 2 | 0.737226 |
SLC25A32 | chr 8 | 104426244 | 104426245 | rs3133817 | + | A | A/G | intron,near-gen | 18 | 1000GENOMES,ABI,AFFY,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK | 2 | 0.736441 |
SLC25A32 | chr 8 | 104420099 | 104420100 | rs3134254 | + | T | C/T | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BUSHMAN,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLU | 2 | 0.232726 |
SLC25A32 | chr 8 | 104420199 | 104420200 | rs3134255 | + | T | A/T | intron | 10 | 1000GENOMES,ABI,BCM_SSAHASNP,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_JCM, | 2 | 0.260512 |
SLC25A32 | chr 8 | 104420746 | 104420747 | rs3134262 | + | C | C/G | intron | 13 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,PERLEGEN | 2 | 0.764041 |
SLC25A32 | chr 8 | 104420981 | 104420982 | rs3134266 | + | T | A/T | intron | 18 | 1000GENOMES,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA | 2 | 0.449078 |
SLC25A32 | chr 8 | 104421901 | 104421902 | rs3134269 | + | C | C/T | intron | 6 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SC_JCM, | 2 | 0.967638 |
SLC25A32 | chr 8 | 104422814 | 104422815 | rs3134279 | + | T | C/T | intron | 11 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,SC_JCM,SSMP,TISHKOFF, | 2 | 0.22319
|
SLC25A32 | chr 8 | 104423173 | 104423174 | rs3134284 | + | T | C/T | intron | 2 | 1000GENOMES,SC_JCM, | 2 | 0.033507 |
SLC25A32 | chr 8 | 104423293 | 104423294 | rs3134285 | + | G | A/G | intron | 17 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_J | 2 | 0.499426 |
SLC25A32 | chr 8 | 104423310 | 104423311 | rs3134286 | + | T | A/T | intron | 15 | 1000GENOMES,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA-UK,PJP,S | 2 | 0.233414 |
SLC25A32 | chr 8 | 104423485 | 104423486 | rs3134287 | + | T | C/T | intron | 21 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGEN | 2 | 0.50949
|
SLC25A32 | chr 8 | 104423979 | 104423980 | rs3134289 | + | T | A/T | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLU | 2 | 0.4946
|
SLC25A32 | chr 8 | 104424189 | 104424190 | rs3134290 | + | C | C/T | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLU | 2 | 0.550919 |
SLC25A32 | chr 8 | 104425608 | 104425609 | rs3134291 | + | C | C/T | intron,near-gen | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JC | 2 | 0.547898 |
SLC25A32 | chr 8 | 104426044 | 104426045 | rs3134292 | + | C | A/C | intron,near-gen | 18 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLU | 2 | 0.258745 |
SLC25A32 | chr 8 | 104426083 | 104426084 | rs3134293 | + | C | C/T | intron,near-gen | 13 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,S | 2 | 0.793236 |
SLC25A32 | chr 8 | 104426797 | 104426798 | rs3134294 | + | A | A/C | intron,near-gen | 2 | 1000GENOMES,SC_JCM, | 2 | 0.966057 |
SLC25A32 | chr 8 | 104427358 | 104427359 | rs3134295 | + | A | A/C | ncRNA,missense, | 25 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,EXOME_CHIP,GMI,HG | 2 | 0.53701
|
SLC25A32 | chr 8 | 104427540 | 104427541 | rs3134296 | + | C | C/T | ncRNA,missense, | 23 | 1000GENOMES,ABI,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,EXOME_CHIP,GMI,HUMANGENOME_JCVI | 2 | 0.817443 |
SLC25A32 | chr 8 | 104413535 | 104413535 | rs34813768 | + | - | -/C | intron | 9 | 1000GENOMES,ABI,BILGI_BIOE,BL,BUSHMAN,GMI,HUMANGENOME_JCVI,LUNTER,TISHKOFF, | 2 | 0.735105 |
SLC25A32 | chr 8 | 104412516 | 104412517 | rs35225263 | + | A | A/T | ncRNA,untransla | 12 | 1000GENOMES,ABI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,PJP,SSMP,TISHKOFF | 2 | 0.824171 |
SLC25A32 | chr 8 | 104418309 | 104418310 | rs4734708 | + | C | C/T | intron | 15 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JC | 2 | 0.094977 |
SLC25A32 | chr 8 | 104426909 | 104426910 | rs5893654 | + | T | -/T | intron,near-gen | 3 | 1000GENOMES,ABI,DEVINE_LAB, | 2 | 0.443119 |
SLC25A32 | chr 8 | 104422571 | 104422572 | rs60977629 | + | C | C/T | intron | 2 | 1000GENOMES,HGSV, | 2 | 0.989547 |
SLC25A32 | chr 8 | 104414781 | 104414782 | rs6995834 | + | G | A/G | intron | 3 | 1000GENOMES,BCM_SSAHASNP,TISHKOFF, | 2 | 0.017857 |
SLC25A32 | chr 8 | 104418566 | 104418567 | rs7016654 | + | A | A/C | intron | 5 | 1000GENOMES,BCM_SSAHASNP,COMPLETE_GENOMICS,ILLUMINA-UK,TISHKOFF, | 2 | 0.954629 |
SLC25A32 | chr 8 | 104416800 | 104416801 | rs71520812 | + | C | C/T | intron | 6 | 1000GENOMES,BL,ENSEMBL,HUMANGENOME_JCVI,SSMP,TISHKOFF, | 2 | 0.943171 |
SLC25A32 | chr 8 | 104414592 | 104414593 | rs72675449 | + | A | A/G | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,GMI,TISHKOFF, | 2 | 0.933486 |
SLC25A32 | chr 8 | 104424021 | 104424022 | rs73287934 | + | G | A/G | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA-UK, | 2 | 0.022915 |
SLC25A32 | chr 8 | 104426791 | 104426792 | rs73699799 | + | C | C/T | intron,near-gen | 2 | 1000GENOMES,ILLUMINA-UK, | 2 | 0.987615 |
SLC25A32 | chr 8 | 104412830 | 104412831 | rs74387812 | + | G | A/G | intron | 2 | 1000GENOMES,GMI, | 2 | 0.010101 |
SLC25A32 | chr 8 | 104412634 | 104412635 | rs74934875 | + | G | A/G | ncRNA,untransla | 4 | 1000GENOMES,CLINSEQ_SNP,ILLUMINA,NHLBI-ESP, | 2 | 0.014779 |
SLC25A32 | chr 8 | 104412983 | 104412984 | rs76049463 | + | G | C/G | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.017842 |
SLC46A1 | chr 17 | 26721894 | 26721895 | rs1128161 | - | G | C/T | untranslated-3 | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,H | 2 | 0.355263 |
SLC46A1 | chr 17 | 26721790 | 26721791 | rs1128162 | - | C | G/T | untranslated-3 | 22 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BL,BUSHMAN,CGAP-GAI,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI, | 2 | 0.361258 |
SLC46A1 | chr 17 | 26729077 | 26729078 | rs113093738 | + | T | C/T | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.026123 |
SLC46A1 | chr 17 | 26722889 | 26722890 | rs117451747 | + | A | A/G | untranslated-3 | 4 | 1000GENOMES,CLINSEQ_SNP,ILLUMINA,NHLBI-ESP, | 2 | 0.988728 |
SLC46A1 | chr 17 | 26723831 | 26723832 | rs118138669 | + | C | C/T | untranslated-3 | 3 | 1000GENOMES,ILLUMINA,SSMP, | 2 | 0.987815 |
SLC46A1 | chr 17 | 26723706 | 26723707 | rs12453383 | + | G | A/G | untranslated-3 | 4 | 1000GENOMES,ABI,CSHL-HAPMAP,ENSEMBL, | 2 | 0.010999 |
SLC46A1 | chr 17 | 26729452 | 26729453 | rs17719944 | + | A | A/G | intron | 8 | 1000GENOMES,BCMHGSC_JDW,COMPLETE_GENOMICS,ENSEMBL,ILLUMINA,KRIBB_YJKIM,PERLEGEN,RSG_UW, | 2 | 0.947446 |
SLC46A1 | chr 17 | 26732385 | 26732386 | rs201076728 | + | C | C/T | missense | 3 | CLINSEQ_SNP,EXOME_CHIP,NHLBI-ESP, | 2 | 0.989
|
SLC46A1 | chr 17 | 26725743 | 26725744 | rs2239907 | - | T | A/G | untranslated-3 | 24 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BL,BUSHMAN,CGAP-GAI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSE | 2 | 0.437645 |
SLC46A1 | chr 17 | 26725264 | 26725265 | rs2239908 | - | G | C/T | untranslated-3 | 22 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,H | 2 | 0.380708 |
SLC46A1 | chr 17 | 26723665 | 26723666 | rs2239910 | - | A | G/T | untranslated-3 | 22 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,H | 2 | 0.758781 |
SLC46A1 | chr 17 | 26723612 | 26723613 | rs2239911 | - | G | A/C | untranslated-3 | 16 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,ILLUMINA-UK,KRIBB | 2 | 0.545127 |
SLC46A1 | chr 17 | 26731724 | 26731725 | rs35257694 | + | G | A/G | coding-synon | 2 | APPLERA_GI,NHLBI-ESP, | 2 | 0.014706 |
SLC46A1 | chr 17 | 26732943 | 26732944 | rs41297071 | - | C | C/G/T | missense | 3 | EXOME_CHIP,NHLBI-ESP,RSG_UW, | 3 | 0.010526 |
SLC46A1 | chr 17 | 26729213 | 26729214 | rs41297097 | - | C | C/G | intron | 4 | 1000GENOMES,ILLUMINA,NHLBI-ESP,RSG_UW, | 2 | 0.021501 |
SLC46A1 | chr 17 | 26725942 | 26725943 | rs41297903 | - | C | A/G | untranslated-3 | 4 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA,RSG_UW, | 2 | 0.01058
|
SLC46A1 | chr 17 | 26725428 | 26725429 | rs41297909 | - | T | A/G | untranslated-3 | 5 | 1000GENOMES,GMI,ILLUMINA,RSG_UW,SSMP, | 2 | 0.987881 |
SLC46A1 | chr 17 | 26729427 | 26729428 | rs4795436 | + | C | C/T | intron | 21 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JC | 2 | 0.129184 |
SLC46A1 | chr 17 | 26732288 | 26732289 | rs61732735 | + | G | C/G | coding-synon | 1 | CORNELL, | 2 | 0.986486 |
SLC46A1 | chr 17 | 26724551 | 26724552 | rs7225850 | + | C | C/G | untranslated-3 | 5 | 1000GENOMES,BCM_SSAHASNP,ILLUMINA,RSG_UW,TISHKOFF, | 2 | 0.989376 |
SLC46A1 | chr 17 | 26723408 | 26723409 | rs73273104 | + | C | C/T | untranslated-3 | 4 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA,TISHKOFF, | 2 | 0.969266 |
SLC46A1 | chr 17 | 26723821 | 26723822 | rs739439 | - | C | A/G | untranslated-3 | 13 | 1000GENOMES,ABI,BCMHGSC_JDW,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOF | 2 | 0.097242 |
SLC46A1 | chr 17 | 26727376 | 26727377 | rs756768 | - | T | A/C | intron | 21 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEM | 2 | 0
|
SLC46A1 | chr 17 | 26722644 | 26722645 | rs8079943 | + | G | A/G | untranslated-3 | 15 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,PJP,SSMP | 2 | 0.636322 |
SLC46A1 | chr 17 | 26722727 | 26722728 | rs8081240 | + | C | C/T | untranslated-3 | 15 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,PJP,SSMP | 2 | 0.37032
|
TCN1 | chr 11 | 59623432 | 59623433 | rs1042613 | - | G | C/T | coding-synon | 20 | 1000GENOMES,AFFY,APPLERA_GI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,GMI,ILLUMINA,KRIBB_YJKIM,LEE,MG | 2 | 0.703753 |
TCN1 | chr 11 | 59633109 | 59633110 | rs112170721 | + | A | -/A | intron | 3 | 1000GENOMES,BUSHMAN,LUNTER, | 2 | 0.010092 |
TCN1 | chr 11 | 59630772 | 59630772 | rs113003128 | + | - | -/A | intron | 4 | 1000GENOMES,BUSHMAN,LUNTER,TISHKOFF, | 2 | 0.93945
|
TCN1 | chr 11 | 59623186 | 59623187 | rs113149545 | + | A | A/T | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.988991 |
TCN1 | chr 11 | 59626407 | 59626408 | rs113348812 | + | G | A/G | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.011009 |
TCN1 | chr 11 | 59624273 | 59624274 | rs114817661 | + | C | C/T | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.989983 |
TCN1 | chr 11 | 59630338 | 59630339 | rs115442273 | + | A | A/G | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.98824
|
TCN1 | chr 11 | 59631744 | 59631745 | rs115485092 | + | T | A/T | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.013502 |
TCN1 | chr 11 | 59633586 | 59633587 | rs116127821 | + | A | A/C | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.987369 |
TCN1 | chr 11 | 59628810 | 59628811 | rs117699377 | + | C | A/C | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.011749 |
TCN1 | chr 11 | 59626895 | 59626896 | rs11822978 | + | C | C/T | intron | 6 | 1000GENOMES,ABI,CSHL-HAPMAP,ENSEMBL,ILLUMINA,KRIBB_YJKIM, | 2 | 0.988575 |
TCN1 | chr 11 | 59627820 | 59627821 | rs12269818 | + | T | C/T | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,SC_SNP, | 2 | 0.015596 |
TCN1 | chr 11 | 59630950 | 59630951 | rs138028612 | + | C | C/T | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.988522 |
TCN1 | chr 11 | 59621700 | 59621704 | rs145926120 | + | AA | -/AAA | intron | 2 | 1000GENOMES,LUNTER, | 2 | 0.015151 |
TCN1 | chr 11 | 59627689 | 59627690 | rs148040945 | + | C | C/T | intron | 1 | 1000GENOMES, | 2 | 0.988981 |
TCN1 | chr 11 | 59622589 | 59622589 | rs199752274 | + | - | -/T | intron | 1 | 1000GENOMES, | 2 | 0.980257 |
TCN1 | chr 11 | 59630835 | 59630836 | rs2000613 | + | G | G/T | intron | 6 | 1000GENOMES,ABI,AFFY,ILLUMINA,SC_JCM,TSC-CSHL, | 2 | 0.98405
|
TCN1 | chr 11 | 59623377 | 59623378 | rs34324219 | + | C | A/C | missense | 12 | 1000GENOMES,APPLERA_GI,BCM-HGSC-SUB,CLINSEQ_SNP,COMPLETE_GENOMICS,EXOME_CHIP,ILLUMINA,NHLBI-ESP,PERL | 2 | 0.085682 |
TCN1 | chr 11 | 59631534 | 59631535 | rs34528912 | + | C | C/T | missense | 7 | 1000GENOMES,APPLERA_GI,CLINSEQ_SNP,EXOME_CHIP,ILLUMINA,NHLBI-ESP,PERLEGEN, | 2 | 0.971403 |
TCN1 | chr 11 | 59624535 | 59624536 | rs519221 | + | A | A/T | intron | 14 | 1000GENOMES,ABI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,KWOK,PJP,SC_JCM,SNP500CANCER,SSMP,TIS | 2 | 0.763132 |
TCN1 | chr 11 | 59633492 | 59633493 | rs526934 | + | G | A/G | intron | 24 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,EXOME_CHIP,GMI,HGSV,HUMANG | 2 | 0.79497
|
TCN1 | chr 11 | 59629304 | 59629305 | rs557564 | + | C | C/T | intron | 14 | 1000GENOMES,AFFY,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA,KRIBB_YJKIM,KWOK,SC_JCM,SC_SNP,SNP500CANC | 4 | 0.002689 |
TCN1 | chr 11 | 59627211 | 59627212 | rs56807325 | + | T | A/T | intron | 6 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,HGSV,ILLUMINA-UK,TISHKOFF, | 2 | 0.060467 |
TCN1 | chr 11 | 59632272 | 59632273 | rs61903593 | + | A | A/G | intron | 3 | 1000GENOMES,BCMHGSC_JDW,ILLUMINA, | 2 | 0.986685 |
TCN1 | chr 11 | 59632209 | 59632210 | rs73490907 | + | A | A/G | intron | 6 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,ILLUMINA,ILLUMINA-UK,TISHKOFF, | 2 | 0.938159 |
TCN1 | chr 11 | 59628714 | 59628715 | rs74612762 | + | C | C/T | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.978223 |
TCN1 | chr 11 | 59624196 | 59624197 | rs75575106 | + | G | C/G | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.010017 |
TCN1 | chr 11 | 59628256 | 59628257 | rs77232416 | + | G | A/G | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.019582 |
TCN1 | chr 11 | 59621083 | 59621084 | rs77529726 | + | G | C/G | intron | 4 | 1000GENOMES,BUSHMAN,SSMP,TISHKOFF, | 2 | 0.046725 |
TCN1 | chr 11 | 59621009 | 59621010 | rs78136883 | + | G | G/T | intron | 4 | 1000GENOMES,BUSHMAN,ILLUMINA,TISHKOFF, | 2 | 0.965691 |
TCN1 | chr 11 | 59628106 | 59628107 | rs78157647 | + | T | G/T | intron | 2 | 1000GENOMES,BUSHMAN, | 2 | 0.01055
|
TCN1 | chr 11 | 59628687 | 59628688 | rs78756297 | + | G | G/T | intron | 2 | 1000GENOMES,BCM-HGSC-SUB, | 2 | 0.983014 |
TCN1 | chr 11 | 59628092 | 59628093 | rs79549875 | + | A | A/C | intron | 3 | 1000GENOMES,ILLUMINA,TISHKOFF, | 2 | 0.977787 |
TCN1 | chr 11 | 59633344 | 59633345 | rs80029954 | + | G | C/G | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.021323 |
TCN2 | chr 22 | 31022951 | 31022952 | rs10418 | + | C | C/T | untranslated-3 | 23 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,CGAP-GAI,CSHL-HAPMAP,ENSEMBL,GMI,HGBASE,HGSV,HUMANGENOME_ | 2 | 0.740015 |
TCN2 | chr 22 | 31015937 | 31015938 | rs10439913 | + | T | C/T | intron | 17 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,H | 2 | 0.626369 |
TCN2 | chr 22 | 31014571 | 31014572 | rs111808252 | + | G | A/G | intron | 6 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF, | 2 | 0.16995
|
TCN2 | chr 22 | 31004596 | 31004597 | rs112812772 | + | G | A/G | intron,near-gen | 4 | 1000GENOMES,BUSHMAN,SSMP,TISHKOFF, | 2 | 0.03072
|
TCN2 | chr 22 | 31018974 | 31018975 | rs1131603 | + | T | C/T | missense | 11 | 1000GENOMES,AFFY,APPLERA_GI,CLINSEQ_SNP,EXOME_CHIP,ILLUMINA,KRIBB_YJKIM,LEE,NHLBI-ESP,SEATTLESEQ,SEQ | 2 | 0.03352
|
TCN2 | chr 22 | 31022815 | 31022815 | rs113702823 | + | - | -/A | untranslated-3 | 5 | 1000GENOMES,BUSHMAN,LUNTER,SSMP,TISHKOFF, | 2 | 0.901376 |
TCN2 | chr 22 | 31008238 | 31008239 | rs114048634 | + | A | A/T | intron | 1 | 1000GENOMES, | 2 | 0.987805 |
TCN2 | chr 22 | 31003606 | 31003607 | rs114108004 | + | G | A/G | intron,near-gen | 1 | 1000GENOMES, | 2 | 0.012195 |
TCN2 | chr 22 | 31021209 | 31021210 | rs114577274 | + | T | A/T | intron | 1 | 1000GENOMES, | 2 | 0.01176
|
TCN2 | chr 22 | 31020679 | 31020680 | rs115095252 | + | A | A/G | intron | 1 | 1000GENOMES, | 2 | 0.989111 |
TCN2 | chr 22 | 31015217 | 31015218 | rs115369988 | + | C | C/G | intron | 1 | 1000GENOMES, | 2 | 0.987369 |
TCN2 | chr 22 | 31007519 | 31007520 | rs116365548 | + | C | C/T | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.980546 |
TCN2 | chr 22 | 31008332 | 31008333 | rs116933452 | + | C | C/T | intron | 4 | 1000GENOMES,GMI,SSMP,TISHKOFF, | 2 | 0.891232 |
TCN2 | chr 22 | 31014005 | 31014006 | rs117005270 | + | C | C/T | intron | 3 | 1000GENOMES,SSMP,TISHKOFF, | 2 | 0.989556 |
TCN2 | chr 22 | 31009117 | 31009118 | rs11703570 | + | T | A/T | intron | 14 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,PERLEGEN, | 2 | 0.219836 |
TCN2 | chr 22 | 31015984 | 31015985 | rs11703609 | + | A | A/T | intron | 4 | 1000GENOMES,ABI,BL,CSHL-HAPMAP, | 2 | 0.965187 |
TCN2 | chr 22 | 31004987 | 31004988 | rs117324970 | + | G | A/G | intron,near-gen | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.019582 |
TCN2 | chr 22 | 31013373 | 31013374 | rs117458738 | + | C | C/T | missense | 5 | 1000GENOMES,EXOME_CHIP,ILLUMINA,NHLBI-ESP,SSMP, | 2 | 0.989991 |
TCN2 | chr 22 | 31011898 | 31011899 | rs117582294 | + | G | A/G | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.01436
|
TCN2 | chr 22 | 31013186 | 31013187 | rs117808091 | + | C | C/T | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.986945 |
TCN2 | chr 22 | 31021411 | 31021412 | rs117877464 | + | G | G/T | intron | 4 | 1000GENOMES,GMI,SSMP,TISHKOFF, | 2 | 0.881636 |
TCN2 | chr 22 | 31014890 | 31014891 | rs117958009 | + | G | A/G | intron | 4 | 1000GENOMES,GMI,SSMP,TISHKOFF, | 2 | 0.114447 |
TCN2 | chr 22 | 31009838 | 31009839 | rs11913239 | + | C | C/T | intron | 9 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.825629 |
TCN2 | chr 22 | 31022634 | 31022635 | rs12160073 | + | C | C/T | untranslated-3 | 12 | 1000GENOMES,ABI,COMPLETE_GENOMICS,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,PJP,SC_SNP,SI_EXO,SSMP,TISHKOFF | 2 | 0.914835 |
TCN2 | chr 22 | 31014418 | 31014419 | rs12160098 | + | A | A/G | intron | 4 | 1000GENOMES,SC_SNP,SSMP,TISHKOFF, | 2 | 0.953168 |
TCN2 | chr 22 | 31017716 | 31017717 | rs12160394 | + | C | C/T | intron | 4 | 1000GENOMES,SC_SNP,SSMP,TISHKOFF, | 2 | 0.945822 |
TCN2 | chr 22 | 31022300 | 31022301 | rs12168392 | + | G | A/G | intron | 7 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,ILLUMINA-UK,SC_SNP,SNP500CANCER,TISHKOFF, | 2 | 0.100309 |
TCN2 | chr 22 | 31013788 | 31013789 | rs12169435 | + | C | C/T | intron | 4 | 1000GENOMES,HGSV,SC_SNP,TISHKOFF, | 2 | 0.980546 |
TCN2 | chr 22 | 31022589 | 31022590 | rs12169610 | + | C | C/T | untranslated-3 | 9 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,HGSV,ILLUMINA,ILLUMINA-UK,SC_SNP,SSMP,TISHKOFF, | 2 | 0.902015 |
TCN2 | chr 22 | 31020340 | 31020341 | rs12485165 | + | G | G/T | intron | 6 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,SSMP, | 2 | 0.886801 |
TCN2 | chr 22 | 31017402 | 31017403 | rs13055009 | + | C | C/T | intron | 14 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,SNP50 | 2 | 0.698999 |
TCN2 | chr 22 | 31012672 | 31012673 | rs13056240 | + | A | A/G | intron | 10 | 1000GENOMES,ABI,COMPLETE_GENOMICS,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.918956 |
TCN2 | chr 22 | 31017342 | 31017343 | rs13056378 | + | T | C/T | intron | 16 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PERLE | 2 | 0.302487 |
TCN2 | chr 22 | 31020974 | 31020975 | rs13057127 | + | A | A/C | intron | 11 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BL,ENSEMBL,GMI,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.776352 |
TCN2 | chr 22 | 31019234 | 31019234 | rs138878342 | + | - | -/C | intron | 5 | 1000GENOMES,BL,GMI,LUNTER,WARNICH_LAB, | 2 | 0.690083 |
TCN2 | chr 22 | 31007936 | 31007939 | rs141654209 | + | AA | -/AAG | intron | 3 | 1000GENOMES,LUNTER,SSMP, | 2 | 0.102388 |
TCN2 | chr 22 | 31016006 | 31016007 | rs141821206 | + | G | C/G | intron | 1 | 1000GENOMES, | 2 | 0.024334 |
TCN2 | chr 22 | 31006613 | 31006613 | rs143253871 | + | - | -/T | intron | 3 | 1000GENOMES,LUNTER,TISHKOFF, | 2 | 0.981635 |
TCN2 | chr 22 | 31021048 | 31021049 | rs146674472 | + | C | C/G | intron | 4 | 1000GENOMES,GMI,SSMP,TISHKOFF, | 2 | 0.88843
|
TCN2 | chr 22 | 31007736 | 31007737 | rs147831001 | + | C | C/T | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.988522 |
TCN2 | chr 22 | 31012956 | 31012958 | rs149468246 | + | AG | -/AG | intron | 6 | 1000GENOMES,BILGI_BIOE,GMI,LUNTER,SSMP,TISHKOFF, | 2 | 0.106061 |
TCN2 | chr 22 | 31020113 | 31020114 | rs150167372 | + | T | C/T | intron | 1 | 1000GENOMES, | 2 | 0.10101
|
TCN2 | chr 22 | 31017457 | 31017457 | rs150245831 | + | - | -/ATT | cds-indel | 5 | 1000GENOMES,BL,LUNTER,PJP,TISHKOFF, | 2 | 0.630395 |
TCN2 | chr 22 | 31003560 | 31003561 | rs16988828 | + | A | A/G | intron,near-gen | 9 | 1000GENOMES,BCM-HGSC-SUB,ENSEMBL,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.894023 |
TCN2 | chr 22 | 31005513 | 31005514 | rs16988838 | + | G | C/G | intron | 4 | 1000GENOMES,AFFY,KRIBB_YJKIM,PERLEGEN, | 2 | 0.011314 |
TCN2 | chr 22 | 31011922 | 31011923 | rs16988855 | + | T | C/T | intron | 10 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.183206 |
TCN2 | chr 22 | 31011609 | 31011610 | rs1801198 | + | G | C/G | missense | 33 | 1000GENOMES,ABI,APPLERA_GI,BCMHGSC_JDW,BGI,BL,BUSHMAN,CGAP-GAI,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HA | 2 | 0.609673 |
TCN2 | chr 22 | 31021456 | 31021457 | rs182224918 | + | T | A/T | intron | 1 | 1000GENOMES, | 2 | 0.011019 |
TCN2 | chr 22 | 31019639 | 31019640 | rs186778399 | + | A | A/G | intron | 1 | 1000GENOMES, | 2 | 0.989899 |
TCN2 | chr 22 | 31020066 | 31020067 | rs190673036 | + | A | A/T | intron | 2 | 1000GENOMES,GMI, | 2 | 0.804408 |
TCN2 | chr 22 | 31020066 | 31020067 | rs200469023 | + | A | -/A | intron | 1 | 1000GENOMES, | 2 | 0.165289 |
TCN2 | chr 22 | 31019698 | 31019702 | rs200689569 | + | AC | -/ACA | intron | 1 | 1000GENOMES, | 2 | 0.124426 |
TCN2 | chr 22 | 31016145 | 31016146 | rs200691136 | + | A | -/A | intron | 1 | 1000GENOMES, | 2 | 0.015611 |
TCN2 | chr 22 | 31014376 | 31014377 | rs2009857 | - | C | A/G | intron | 10 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA-UK,PERLEGEN,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.166738 |
TCN2 | chr 22 | 31014473 | 31014474 | rs2009862 | + | C | C/T | intron | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HU | 2 | 0.387392 |
TCN2 | chr 22 | 31022271 | 31022272 | rs2072194 | + | G | A/G | intron | 21 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENO | 2 | 0.637037 |
TCN2 | chr 22 | 31022732 | 31022733 | rs2072195 | + | A | A/T | untranslated-3 | 10 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI,HGBASE,ILLUMINA,ILLUMINA-UK,SSMP,TISHKOFF,YUSUKE, | 2 | 0.805641 |
TCN2 | chr 22 | 31003137 | 31003138 | rs2240433 | + | A | A/G | near-gene-5,unt | 21 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV, | 2 | 0.460802 |
TCN2 | chr 22 | 31010996 | 31010997 | rs2267162 | + | C | C/T | intron | 10 | 1000GENOMES,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA,ILLUMINA-UK,SSMP,TISHKOFF,YUSUKE, | 2 | 0.819691 |
TCN2 | chr 22 | 31011556 | 31011557 | rs2267163 | + | T | C/T | intron | 27 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,G | 2 | 0.588671 |
TCN2 | chr 22 | 31017397 | 31017398 | rs2267164 | + | T | C/T | intron | 20 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMA | 2 | 0.630542 |
TCN2 | chr 22 | 31017677 | 31017678 | rs2267165 | + | C | C/G | intron | 4 | 1000GENOMES,GMI,SSMP,YUSUKE, | 2 | 0.903122 |
TCN2 | chr 22 | 31018077 | 31018078 | rs2267166 | + | G | A/G | intron | 11 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,SSMP,TISHKOFF,WI_SSAHASNP,YUSUKE, | 2 | 0.170709 |
TCN2 | chr 22 | 31013295 | 31013296 | rs2283873 | + | G | A/G | intron | 12 | 1000GENOMES,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,GMI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,NHLBI-ESP,SSM | 2 | 0.143786 |
TCN2 | chr 22 | 31018645 | 31018646 | rs2301955 | + | C | C/T | intron | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI, | 2 | 0.708443 |
TCN2 | chr 22 | 31018776 | 31018777 | rs2301956 | + | G | A/G | intron | 20 | 1000GENOMES,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV, | 2 | 0.6746
|
TCN2 | chr 22 | 31018816 | 31018817 | rs2301957 | + | C | C/T | intron | 19 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMA | 2 | 0.704611 |
TCN2 | chr 22 | 31018883 | 31018884 | rs2301958 | + | G | C/G | intron | 9 | 1000GENOMES,BCM-HGSC-SUB,BGI,BL,GMI,SI_EXO,SSMP,TISHKOFF,YUSUKE, | 2 | 0.224961 |
TCN2 | chr 22 | 31008284 | 31008285 | rs2412993 | + | C | C/T | intron | 4 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,TSC-CSHL, | 2 | 0.943171 |
TCN2 | chr 22 | 31003453 | 31003454 | rs28704032 | + | A | A/G | intron,near-gen | 4 | 1000GENOMES,GMI,SSAHASNP,SSMP, | 2 | 0.974761 |
TCN2 | chr 22 | 31020523 | 31020523 | rs34136060 | + | - | -/TTC | cds-indel | 4 | 1000GENOMES,ABI,GMI,LUNTER, | 2 | 0.695592 |
TCN2 | chr 22 | 31021816 | 31021817 | rs34886169 | + | C | C/G | intron | 7 | 1000GENOMES,ABI,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP, | 2 | 0.946429 |
TCN2 | chr 22 | 31014998 | 31014999 | rs34978834 | + | T | C/T | intron | 9 | 1000GENOMES,ABI,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.080896 |
TCN2 | chr 22 | 31021335 | 31021336 | rs35307566 | + | T | -/T | intron | 5 | 1000GENOMES,ABI,GMI,LUNTER,SSMP, | 2 | 0.034894 |
TCN2 | chr 22 | 31011349 | 31011350 | rs35838082 | + | C | C/T | missense | 14 | 1000GENOMES,APPLERA_GI,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,EXOME_CHIP,HGSV,ILLUMINA,ILLUMINA-UK,NH | 2 | 0.924748 |
TCN2 | chr 22 | 31008866 | 31008867 | rs35915865 | + | T | C/T | missense | 9 | 1000GENOMES,APPLERA_GI,CLINSEQ_SNP,EXOME_CHIP,ILLUMINA,NHLBI-ESP,PERLEGEN,SI_EXO,SSMP, | 2 | 0.010809 |
TCN2 | chr 22 | 31013392 | 31013393 | rs35997415 | + | C | C/G | coding-synon | 1 | APPLERA_GI, | 2 | 0.986842 |
TCN2 | chr 22 | 31020151 | 31020152 | rs4375972 | + | T | C/T | intron | 12 | 1000GENOMES,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SC_JCM,SC_SNP,SSAHASNP,SSM | 2 | 0.620658 |
TCN2 | chr 22 | 31006003 | 31006004 | rs4820020 | + | C | C/T | intron | 8 | 1000GENOMES,AFFY,ILLUMINA,KRIBB_YJKIM,SC_SNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.961499 |
TCN2 | chr 22 | 31011881 | 31011882 | rs4820021 | + | A | A/T | intron | 21 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HG | 3 | 0.13705
|
TCN2 | chr 22 | 31019447 | 31019448 | rs4820022 | + | T | G/T | intron | 4 | 1000GENOMES,SC_SNP,TISHKOFF,WI_SSAHASNP, | 2 | 0.024826 |
TCN2 | chr 22 | 31005243 | 31005244 | rs4820880 | + | C | A/C | intron | 6 | 1000GENOMES,BUSHMAN,SC_SNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.03072
|
TCN2 | chr 22 | 31005249 | 31005250 | rs4820881 | + | A | A/G | intron | 6 | 1000GENOMES,BUSHMAN,SC_SNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.959193 |
TCN2 | chr 22 | 31005292 | 31005293 | rs4820882 | + | G | A/G | intron | 18 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,I | 2 | 0.473865 |
TCN2 | chr 22 | 31008435 | 31008436 | rs4820884 | + | C | A/C | intron | 6 | 1000GENOMES,BUSHMAN,SC_SNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.03072
|
TCN2 | chr 22 | 31012755 | 31012756 | rs4820885 | + | T | C/T | intron | 15 | 1000GENOMES,ABI,BGI,BUSHMAN,COMPLETE_GENOMICS,DEVINE_LAB,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_SNP,SSAHAS | 2 | 0.576519 |
TCN2 | chr 22 | 31016538 | 31016539 | rs4820886 | + | T | G/T | intron | 9 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,HGSV,ILLUMINA,ILLUMINA-UK,PJP,TISHKOFF,WI_SSAHASNP, | 2 | 0.101886 |
TCN2 | chr 22 | 31016913 | 31016914 | rs4820887 | + | G | A/G | intron | 9 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,HGSV,ILLUMINA,KRIBB_YJKIM,PJP,TISHKOFF,WI_SSAHASNP, | 2 | 0.078165 |
TCN2 | chr 22 | 31017321 | 31017322 | rs4820888 | + | A | A/G | intron | 19 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUM | 2 | 0.642644 |
TCN2 | chr 22 | 31019043 | 31019044 | rs4820889 | + | G | A/G | missense | 16 | 1000GENOMES,AFFY,BUSHMAN,CLINSEQ_SNP,CORNELL,EXOME_CHIP,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,SC_S | 2 | 0.055431 |
TCN2 | chr 22 | 31019456 | 31019457 | rs4820890 | + | A | A/G | intron | 15 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SC_SN | 2 | 0.646709 |
TCN2 | chr 22 | 31006701 | 31006702 | rs56040857 | + | T | G/T | intron | 8 | 1000GENOMES,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,SSMP, | 2 | 0.059012 |
TCN2 | chr 22 | 31022889 | 31022890 | rs56076607 | + | C | C/T | untranslated-3 | 5 | 1000GENOMES,BUSHMAN,SI_EXO,SSMP,TISHKOFF, | 2 | 0.989908 |
TCN2 | chr 22 | 31005017 | 31005018 | rs5749132 | + | A | A/G | intron | 13 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,CSHL-HAPMAP,GMI,HUMANGENOME_JCVI,PERLEGEN,SC_SNP,SSAHASNP,SSMP,T | 2 | 0.777826 |
TCN2 | chr 22 | 31010241 | 31010242 | rs5749134 | + | G | C/G | intron | 16 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PER | 2 | 0.307458 |
TCN2 | chr 22 | 31011905 | 31011906 | rs5749135 | + | C | C/T | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJ | 3 | 0.704252 |
TCN2 | chr 22 | 31017739 | 31017740 | rs5749137 | + | G | G/T | intron | 12 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SC_SNP,SSMP,TISHKO | 2 | 0.690585 |
TCN2 | chr 22 | 31006551 | 31006552 | rs5753233 | + | G | A/G | intron | 6 | 1000GENOMES,BGI,GMI,ILLUMINA,SC_SNP,SSMP, | 2 | 0.058312 |
TCN2 | chr 22 | 31008239 | 31008240 | rs5753234 | + | A | A/T | intron | 10 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SC_SNP, | 2 | 0.771978 |
TCN2 | chr 22 | 31009376 | 31009377 | rs5753235 | + | C | C/T | intron | 15 | 1000GENOMES,ABI,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_S | 2 | 0.538321 |
TCN2 | chr 22 | 31009819 | 31009820 | rs5753236 | + | G | C/G | intron | 19 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMA | 2 | 0.591483 |
TCN2 | chr 22 | 31016982 | 31016983 | rs5753244 | + | T | G/T | intron | 19 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEM | 2 | 0.535763 |
TCN2 | chr 22 | 31017776 | 31017777 | rs5753246 | + | T | C/T | intron | 14 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SC_S | 2 | 0.36621
|
TCN2 | chr 22 | 31018224 | 31018225 | rs5753247 | + | T | C/T | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SC | 2 | 0.360476 |
TCN2 | chr 22 | 31020089 | 31020090 | rs5753249 | + | C | C/T | intron | 8 | 1000GENOMES,BCM-HGSC-SUB,BL,GMI,HUMANGENOME_JCVI,SC_SNP,SSAHASNP,SSMP, | 2 | 0.697706 |
TCN2 | chr 22 | 31020112 | 31020113 | rs5753250 | + | G | A/G | intron | 12 | 1000GENOMES,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SC_SNP,SSAHAS | 2 | 0.622202 |
TCN2 | chr 22 | 31020399 | 31020400 | rs5753252 | + | T | C/T | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENO | 2 | 0.659827 |
TCN2 | chr 22 | 31005576 | 31005578 | rs5844914 | + | GG | -/GG | intron | 8 | 1000GENOMES,BILGI_BIOE,DEVINE_LAB,GMI,HGSV,LUNTER,SSMP,TISHKOFF, | 2 | 0.67034
|
TCN2 | chr 22 | 31015719 | 31015720 | rs58963750 | + | C | C/T | intron | 8 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,HGSV,ILLUMINA,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.922161 |
TCN2 | chr 22 | 31008441 | 31008442 | rs5994324 | + | C | C/T | intron | 4 | 1000GENOMES,BUSHMAN,SC_SNP,TISHKOFF, | 2 | 0.978002 |
TCN2 | chr 22 | 31004827 | 31004828 | rs5997702 | + | C | C/G | intron,near-gen | 6 | 1000GENOMES,BUSHMAN,PERLEGEN,SC_SNP,SSMP,TISHKOFF, | 2 | 0.970715 |
TCN2 | chr 22 | 31010555 | 31010556 | rs5997703 | + | C | C/G | intron | 17 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI, | 2 | 0.704425 |
TCN2 | chr 22 | 31010648 | 31010649 | rs5997704 | + | T | C/T | intron | 20 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOM | 2 | 0.631255 |
TCN2 | chr 22 | 31016910 | 31016911 | rs5997706 | + | A | A/G | intron | 3 | 1000GENOMES,SC_SNP,TISHKOFF, | 2 | 0.987805 |
TCN2 | chr 22 | 31018123 | 31018124 | rs5997707 | + | A | A/G | intron | 4 | 1000GENOMES,SC_SNP,SSMP,TISHKOFF, | 2 | 0.945363 |
TCN2 | chr 22 | 31011504 | 31011505 | rs66752578 | + | A | -/AG | intron | 5 | DEVINE_LAB,GMI,HUMANGENOME_JCVI,PJP,SNP500CANCER, | 2 | 0.092683 |
TCN2 | chr 22 | 31019728 | 31019732 | rs67698685 | + | AT | -/ATA | intron | 5 | 1000GENOMES,BILGI_BIOE,DEVINE_LAB,LUNTER,SSMP, | 2 | 0.197429 |
TCN2 | chr 22 | 31018571 | 31018572 | rs72558388 | + | G | A/G | intron | 3 | 1000GENOMES,ILLUMINA,SNP500CANCER, | 2 | 0.017788 |
TCN2 | chr 22 | 31022278 | 31022279 | rs72558390 | + | T | C/T | intron | 6 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,ILLUMINA-UK,SNP500CANCER,TISHKOFF, | 2 | 0.056049 |
TCN2 | chr 22 | 31022094 | 31022095 | rs72558391 | + | T | G/T | intron | 6 | 1000GENOMES,BUSHMAN,GMI,SNP500CANCER,SSMP,TISHKOFF, | 2 | 0.105487 |
TCN2 | chr 22 | 31022261 | 31022262 | rs72558392 | + | G | G/T | intron | 2 | 1000GENOMES,SNP500CANCER, | 2 | 0.982212 |
TCN2 | chr 22 | 31005009 | 31005010 | rs7286107 | + | T | C/T | intron | 7 | 1000GENOMES,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,HGSV,ILLUMINA-UK,TISHKOFF, | 2 | 0.050704 |
TCN2 | chr 22 | 31018560 | 31018561 | rs7286680 | + | T | G/T | intron | 14 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HUMANGENOME_JCVI,PJP | 2 | 0.302855 |
TCN2 | chr 22 | 31015572 | 31015573 | rs7288385 | + | C | A/C | intron | 10 | 1000GENOMES,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA-UK,PJP,SSMP,TISHKOFF, | 2 | 0.16781
|
TCN2 | chr 22 | 31015561 | 31015562 | rs7288627 | + | G | A/G | intron | 11 | 1000GENOMES,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,PJP,SSMP,TISHKOFF, | 2 | 0.167963 |
TCN2 | chr 22 | 31004187 | 31004188 | rs7289549 | + | G | C/G | intron,near-gen | 11 | 1000GENOMES,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA-UK,PERLEGEN,SC_SNP,SNP500CANCER,SSMP | 2 | 0.266392 |
TCN2 | chr 22 | 31011279 | 31011280 | rs7290898 | + | A | A/C/T | intron | 14 | 1000GENOMES,AFFY,BCM_SSAHASNP,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KR | 2 | 0.860245 |
TCN2 | chr 22 | 31009751 | 31009752 | rs73396379 | + | T | C/T | intron | 8 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.174371 |
TCN2 | chr 22 | 31014859 | 31014860 | rs73396395 | + | G | A/G | intron | 7 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.168421 |
TCN2 | chr 22 | 31019632 | 31019633 | rs73398305 | + | G | A/G | intron | 8 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.170408 |
TCN2 | chr 22 | 31010239 | 31010240 | rs73881489 | + | G | A/G | intron | 5 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,ILLUMINA-UK,TISHKOFF, | 2 | 0.056829 |
TCN2 | chr 22 | 31007918 | 31007919 | rs740233 | + | A | A/G | intron | 17 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA, | 2 | 0.671484 |
TCN2 | chr 22 | 31008744 | 31008745 | rs740234 | - | A | C/T | intron | 15 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJ | 2 | 0.107952 |
TCN2 | chr 22 | 31013548 | 31013549 | rs740235 | + | G | A/G | intron | 19 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_ | 2 | 0.309202 |
TCN2 | chr 22 | 31015603 | 31015604 | rs74714074 | + | C | C/T | intron | 1 | 1000GENOMES, | 2 | 0.989983 |
TCN2 | chr 22 | 31010312 | 31010313 | rs75772248 | + | C | C/T | intron | 5 | 1000GENOMES,BUSHMAN,ILLUMINA,NHLBI-ESP,TISHKOFF, | 2 | 0.988073 |
TCN2 | chr 22 | 31011068 | 31011069 | rs757874 | + | G | G/T | intron | 12 | 1000GENOMES,ABI,AFFY,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,KRIBB_YJKIM,PJP,SSMP,TISHKOFF,TS | 2 | 0.923077 |
TCN2 | chr 22 | 31008536 | 31008537 | rs76222424 | + | C | C/T | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.984848 |
TCN2 | chr 22 | 31013920 | 31013921 | rs76348547 | + | G | G/T | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.949917 |
TCN2 | chr 22 | 31013398 | 31013399 | rs76802001 | + | G | A/G | coding-synon | 4 | 1000GENOMES,CLINSEQ_SNP,ILLUMINA,NHLBI-ESP, | 2 | 0.022846 |
TCN2 | chr 22 | 31021352 | 31021353 | rs77517564 | + | G | A/G | intron | 1 | 1000GENOMES, | 2 | 0.014233 |
TCN2 | chr 22 | 31021609 | 31021610 | rs79071604 | + | C | A/C | intron | 6 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF, | 2 | 0.171782 |
TCN2 | chr 22 | 31003103 | 31003104 | rs79083159 | + | C | C/T | near-gene-5,unt | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.989547 |
TCN2 | chr 22 | 31016671 | 31016672 | rs79657845 | + | A | A/G | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.985627 |
TCN2 | chr 22 | 31016985 | 31016986 | rs79710322 | + | T | G/T | intron | 5 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI,TISHKOFF, | 2 | 0.027956 |
TCN2 | chr 22 | 31008792 | 31008793 | rs79711084 | + | G | A/G | intron | 4 | 1000GENOMES,BUSHMAN,ILLUMINA,TISHKOFF, | 2 | 0.020642 |
TCN2 | chr 22 | 31020068 | 31020069 | rs79864370 | + | T | A/T | intron | 3 | 1000GENOMES,ENSEMBL,GMI, | 2 | 0.224312 |
TCN2 | chr 22 | 31018071 | 31018072 | rs8141515 | + | T | C/T | intron | 10 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.143296 |
TCN2 | chr 22 | 31006859 | 31006860 | rs9606756 | + | A | A/G | missense | 20 | 1000GENOMES,AFFY,APPLERA_GI,BUSHMAN,CGAP-GAI,CLINSEQ_SNP,COMPLETE_GENOMICS,EXOME_CHIP,GMI,HGSV,ILLUM | 2 | 0.884863 |
TCN2 | chr 22 | 31016644 | 31016645 | rs9606757 | + | A | A/G | intron | 5 | 1000GENOMES,GMI,SC_SNP,SSMP,TISHKOFF, | 2 | 0.971854 |
TCN2 | chr 22 | 31004625 | 31004626 | rs9609017 | + | G | C/G | intron,near-gen | 17 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JC | 2 | 0.547814 |
TCN2 | chr 22 | 31016081 | 31016082 | rs9609019 | + | G | A/G | intron | 11 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,ILLUMINA-UK,PJP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.082455 |
TCN2 | chr 22 | 31007291 | 31007292 | rs9619126 | + | A | A/G | intron | 6 | 1000GENOMES,HGSV,ILLUMINA,PJP,SC_SNP,TISHKOFF, | 2 | 0.984484 |
TCN2 | chr 22 | 31004126 | 31004127 | rs9621047 | + | G | A/G | intron,near-gen | 19 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUM | 2 | 0.320535 |
TCN2 | chr 22 | 31013418 | 31013419 | rs9621049 | + | C | C/T | missense | 16 | 1000GENOMES,AFFY,APPLERA_GI,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,EXOME_CHIP,ILLUMINA,ILLUMINA-UK,KR | 2 | 0.882287 |
TYMS | chr 18 | 662102 | 662103 | rs1001761 | - | G | C/T | intron | 24 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,H | 2 | 0.389649 |
TYMS | chr 18 | 660382 | 660383 | rs1004474 | + | A | A/G | intron | 22 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENO | 2 | 0.4673
|
TYMS | chr 18 | 668375 | 668376 | rs1051527 | - | C | C/G | intron | 20 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,KRIBB | 2 | 0.515961 |
TYMS | chr 18 | 672835 | 672836 | rs1059393 | - | A | C/T | intron,untransl | 19 | 1000GENOMES,ABI,BCM_SSAHASNP,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,HGSV,HUMANGEN | 2 | 0.11266
|
TYMS | chr 18 | 672791 | 672792 | rs1059394 | - | C | A/G | intron,untransl | 22 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BUSHMAN,CGAP-GAI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLU | 2 | 0.484471 |
TYMS | chr 18 | 658534 | 658540 | rs111834869 | + | AG | -/AGT | intron,near-gen | 4 | 1000GENOMES,BUSHMAN,GMI,LUNTER, | 2 | 0.297248 |
TYMS | chr 18 | 670036 | 670038 | rs112444526 | + | AG | -/AG | intron | 3 | 1000GENOMES,BUSHMAN,LUNTER, | 2 | 0.022936 |
TYMS | chr 18 | 662077 | 662078 | rs113333865 | + | C | C/T | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.975275 |
TYMS | chr 18 | 666301 | 666302 | rs113382317 | + | T | G/T | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.023853 |
TYMS | chr 18 | 662214 | 662215 | rs11540152 | + | T | C/T | missense | 3 | CGAP-GAI,ILLUMINA,KRIBB_YJKIM, | 2 | 0.087209 |
TYMS | chr 18 | 666321 | 666322 | rs115838176 | + | C | C/T | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.966899 |
TYMS | chr 18 | 658972 | 658973 | rs115954259 | + | G | G/T | intron,near-gen | 1 | 1000GENOMES, | 2 | 0.985627 |
TYMS | chr 18 | 672203 | 672204 | rs116368112 | + | T | G/T | intron,untransl | 1 | 1000GENOMES, | 2 | 0.010017 |
TYMS | chr 18 | 670617 | 670618 | rs116411920 | + | C | C/T | intron,untransl | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.974739 |
TYMS | chr 18 | 658917 | 658918 | rs116569088 | + | A | A/G | intron,near-gen | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.979965 |
TYMS | chr 18 | 668551 | 668552 | rs116736801 | + | G | C/G | intron | 1 | 1000GENOMES, | 2 | 0.010889 |
TYMS | chr 18 | 667690 | 667691 | rs118049362 | + | A | A/T | intron | 2 | 1000GENOMES,GMI, | 2 | 0.988251 |
TYMS | chr 18 | 662134 | 662135 | rs11873890 | + | A | A/G | intron | 10 | 1000GENOMES,ABI,BUSHMAN,CLINSEQ_SNP,CSHL-HAPMAP,ENSEMBL,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,TISHKOFF, | 2 | 0.971741 |
TYMS | chr 18 | 671833 | 671834 | rs12958458 | + | C | C/T | intron,untransl | 8 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.907221 |
TYMS | chr 18 | 672034 | 672035 | rs12962403 | + | C | C/T | intron,untransl | 9 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,HUMANGENOME_JCVI,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.90772
|
TYMS | chr 18 | 668238 | 668238 | rs146056628 | + | - | -/TCT | intron | 3 | 1000GENOMES,BILGI_BIOE,LUNTER, | 2 | 0.928375 |
TYMS | chr 18 | 669292 | 669296 | rs147919381 | + | TT | -/TTG | intron | 5 | 1000GENOMES,BL,GMI,LUNTER,SSMP, | 2 | 0.47888
|
TYMS | chr 18 | 664688 | 664689 | rs150189430 | + | C | C/T | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.484389 |
TYMS | chr 18 | 673443 | 673449 | rs151264360 | + | TT | -/TTA | intron,cds-inde | 3 | 1000GENOMES,GMI,LUNTER, | 2 | 0.478421 |
TYMS | chr 18 | 668257 | 668258 | rs15872 | + | C | C/T | intron | 20 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BGI,BUSHMAN,CGAP-GAI,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK | 2 | 0.485932 |
TYMS | chr 18 | 673443 | 673444 | rs16430 | - | T | -/CTT | intron,cds-inde | 4 | DEVINE_LAB,GMI,MARSHFIELD,PJP, | 2 | 0.427719 |
TYMS | chr 18 | 667016 | 667017 | rs1672569 | - | A | A/T | intron | 2 | 1000GENOMES,SC_JCM, | 2 | 0.368687 |
TYMS | chr 18 | 668464 | 668465 | rs16948305 | + | C | C/T | intron | 11 | 1000GENOMES,ABI,AFFY,BUSHMAN,COMPLETE_GENOMICS,HGSV,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.90797
|
TYMS | chr 18 | 669683 | 669684 | rs16948322 | + | T | C/T | intron | 16 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUM | 2 | 0.481338 |
TYMS | chr 18 | 673210 | 673211 | rs16948409 | + | G | G/T | intron,untransl | 5 | 1000GENOMES,ILLUMINA,KRIBB_YJKIM,PERLEGEN,TISHKOFF, | 2 | 0.982759 |
TYMS | chr 18 | 673394 | 673395 | rs16948421 | + | G | A/G | intron,untransl | 7 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SNP500CANCER,TISHKOFF, | 2 | 0.052015 |
TYMS | chr 18 | 667076 | 667077 | rs182891213 | + | A | A/T | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.836547 |
TYMS | chr 18 | 657656 | 657657 | rs183205964 | + | G | C/G | intron,untransl | 1 | 1000GENOMES, | 2 | 0.010101 |
TYMS | chr 18 | 665833 | 665834 | rs183742746 | + | T | A/T | intron | 2 | 1000GENOMES,GMI, | 2 | 0.016988 |
TYMS | chr 18 | 666135 | 666136 | rs183940845 | + | A | A/T | intron | 1 | 1000GENOMES, | 2 | 0.968779 |
TYMS | chr 18 | 664367 | 664368 | rs184086822 | + | A | A/G | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.708907 |
TYMS | chr 18 | 667291 | 667292 | rs185823373 | + | A | A/T | intron | 1 | 1000GENOMES, | 2 | 0.812672 |
TYMS | chr 18 | 662662 | 662663 | rs189809692 | + | C | C/G | intron | 1 | 1000GENOMES, | 2 | 0.978421 |
TYMS | chr 18 | 658589 | 658590 | rs192603316 | + | C | C/T | intron,near-gen | 1 | 1000GENOMES, | 2 | 0.982553 |
TYMS | chr 18 | 665794 | 665795 | rs193023028 | + | G | A/G | intron | 1 | 1000GENOMES, | 2 | 0.028007 |
TYMS | chr 18 | 661811 | 661812 | rs1970763 | + | A | A/G | intron | 19 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOM | 2 | 0.496577 |
TYMS | chr 18 | 661755 | 661756 | rs2015944 | - | T | A/G | intron | 19 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JC | 2 | 0.415602 |
TYMS | chr 18 | 673442 | 673448 | rs202243265 | + | TT | -/TTT | intron,cds-inde | 1 | 1000GENOMES, | 2 | 0.429752 |
TYMS | chr 18 | 661916 | 661917 | rs2124616 | - | G | C/T | intron | 9 | 1000GENOMES,ABI,COMPLETE_GENOMICS,ENSEMBL,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.927264 |
TYMS | chr 18 | 661004 | 661005 | rs2244500 | - | A | C/T | intron | 23 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI, | 2 | 0.628794 |
TYMS | chr 18 | 659870 | 659871 | rs2606240 | - | A | C/T | intron,near-gen | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL, | 2 | 0.60337
|
TYMS | chr 18 | 667769 | 667770 | rs2606242 | + | C | C/G | intron | 12 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA-UK,SC_JCM,SSMP,TISHKOF | 2 | 0.562929 |
TYMS | chr 18 | 672042 | 672043 | rs2606245 | + | A | A/G | intron,untransl | 16 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,S | 2 | 0.424726 |
TYMS | chr 18 | 662369 | 662370 | rs2612095 | + | T | C/T | intron | 25 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMAN | 2 | 0.630889 |
TYMS | chr 18 | 666600 | 666601 | rs2612096 | + | A | A/G | intron | 19 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOM | 2 | 0.398006 |
TYMS | chr 18 | 670994 | 670995 | rs2612098 | + | A | A/C | intron,untransl | 19 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUM | 3 | 0.400249 |
TYMS | chr 18 | 671726 | 671727 | rs2612099 | + | G | A/G | intron,untransl | 14 | 1000GENOMES,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PERLEGEN,PJP,SC_JCM,SSMP,T | 2 | 0.450493 |
TYMS | chr 18 | 672362 | 672363 | rs2612100 | + | G | A/G | intron,untransl | 23 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMAN | 2 | 0.538982 |
TYMS | chr 18 | 673085 | 673086 | rs2790 | + | A | A/G/T | intron,untransl | 19 | 1000GENOMES,BCMHGSC_JDW,BGI,BUSHMAN,CGAP-GAI,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA | 3 | 0.717496 |
TYMS | chr 18 | 666370 | 666371 | rs2847149 | + | G | A/G | intron | 22 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOM | 2 | 0.633372 |
TYMS | chr 18 | 668299 | 668300 | rs2847150 | + | G | A/G | intron | 18 | 1000GENOMES,AFFY,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,KRIBB_YJKIM, | 2 | 0.512598 |
TYMS | chr 18 | 671166 | 671167 | rs2847151 | + | G | A/G | intron,untransl | 19 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA-U | 2 | 0.482412 |
TYMS | chr 18 | 661646 | 661647 | rs2847153 | + | G | A/G | intron | 18 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA | 2 | 0.29272
|
TYMS | chr 18 | 670540 | 670541 | rs2847609 | + | A | A/G | intron,untransl | 19 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,PJP | 2 | 0.518375 |
TYMS | chr 18 | 666980 | 666981 | rs2847610 | + | A | A/T | intron | 2 | 1000GENOMES,SC_JCM, | 2 | 0.743802 |
TYMS | chr 18 | 658429 | 658430 | rs2847612 | + | G | C/G | intron,near-gen | 10 | 1000GENOMES,BGI,BUSHMAN,GMI,ILLUMINA,ILLUMINA-UK,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.292449 |
TYMS | chr 18 | 659957 | 659958 | rs2847613 | + | T | C/T | intron,near-gen | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI | 2 | 0.43947
|
TYMS | chr 18 | 660646 | 660647 | rs28503425 | + | C | A/C | intron | 11 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,HGSV,HUMANGENOME_JCVI,ILLUMINA,PJP,SSAHASNP,SSMP,TISHK | 2 | 0.090037 |
TYMS | chr 18 | 667897 | 667898 | rs2853524 | + | T | A/C/G | intron | 19 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUM | 2 | 0.483977 |
TYMS | chr 18 | 667949 | 667950 | rs2853525 | + | T | A/C/T | intron | 19 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUM | 3 | 0.00655
|
TYMS | chr 18 | 668035 | 668036 | rs2853526 | + | A | A/T | intron | 15 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,ENSEMBL,GMI,HGSV,ILLUMINA-UK,LEE,SC_JCM,SNP500CANCER,SSAHASNP | 2 | 0.518387 |
TYMS | chr 18 | 668037 | 668038 | rs2853527 | + | A | A/T | intron | 16 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,LEE,SC_JCM,SNP5 | 2 | 0.518387 |
TYMS | chr 18 | 668649 | 668650 | rs2853528 | + | C | C/T | intron | 20 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI, | 2 | 0.48354
|
TYMS | chr 18 | 669532 | 669533 | rs2853529 | + | C | C/T | intron | 12 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_JCM,SSMP,TISHKOFF | 2 | 0.525858 |
TYMS | chr 18 | 670413 | 670414 | rs2853532 | + | C | C/T | intron,untransl | 21 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JC | 2 | 0.490997 |
TYMS | chr 18 | 658063 | 658064 | rs2853533 | + | G | C/G | intron,missense | 15 | 1000GENOMES,BGI,BUSHMAN,CGAP-GAI,ENSEMBL,EXOME_CHIP,GMI,HGSV,ILLUMINA,MGC_GENOME_DIFF,NHLBI-ESP,SC_J | 2 | 0.316397 |
TYMS | chr 18 | 671025 | 671026 | rs2853534 | + | C | C/T | intron,untransl | 18 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUM | 2 | 0.518028 |
TYMS | chr 18 | 671056 | 671057 | rs2853535 | + | C | C/T | intron,untransl | 19 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUM | 2 | 0.517115 |
TYMS | chr 18 | 671519 | 671520 | rs2853536 | + | C | C/T | intron,untransl | 18 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PERLEGEN,P | 2 | 0.515632 |
TYMS | chr 18 | 671647 | 671648 | rs2853537 | + | A | A/T | intron,untransl | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PERLEGEN,PJP, | 2 | 0.507916 |
TYMS | chr 18 | 672287 | 672288 | rs2853538 | + | C | C/T | intron,untransl | 16 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUM | 2 | 0.515718 |
TYMS | chr 18 | 659828 | 659829 | rs2853539 | + | A | A/G | intron,near-gen | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,E | 2 | 0.400182 |
TYMS | chr 18 | 657684 | 657685 | rs2853542 | + | G | C/G | intron,untransl | 5 | 1000GENOMES,CGAP-GAI,COMPLETE_GENOMICS,SC_JCM,SSMP, | 2 | 0.38578
|
TYMS | chr 18 | 666506 | 666507 | rs2853543 | + | C | C/G | intron | 19 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOM | 2 | 0.488242 |
TYMS | chr 18 | 671104 | 671105 | rs2853740 | + | T | C/T | intron,untransl | 19 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUM | 2 | 0.435435 |
TYMS | chr 18 | 658169 | 658170 | rs28602966 | + | G | G/T | intron,nonsense | 6 | 1000GENOMES,EXOME_CHIP,ILLUMINA,NHLBI-ESP,SSAHASNP,SSMP, | 2 | 0.983012 |
TYMS | chr 18 | 662521 | 662522 | rs2925470 | - | T | A/T | intron | 3 | 1000GENOMES,GMI,SC_JCM, | 2 | 0.650138 |
TYMS | chr 18 | 666272 | 666273 | rs34007153 | + | C | A/C | intron | 3 | 1000GENOMES,ILLUMINA,SNP500CANCER, | 2 | 0.022047 |
TYMS | chr 18 | 673450 | 673451 | rs34489327 | + | T | -/TTA | intron,cds-inde | 1 | SNP500CANCER, | 2 | 0.470052 |
TYMS | chr 18 | 666264 | 666265 | rs34502878 | + | C | C/T | intron | 5 | 1000GENOMES,BGI,GMI,SNP500CANCER,SSMP, | 2 | 0.933872 |
TYMS | chr 18 | 657645 | 657730 | rs34743033 | + | CC | lengt | unknown | 1 | SNP500CANCER, | 3 | 0.336816 |
TYMS | chr 18 | 669295 | 669295 | rs34795969 | + | - | -/ATT | intron | 1 | SNP500CANCER, | 2 | 0.520154 |
TYMS | chr 18 | 670471 | 670472 | rs35143366 | + | C | C/T | intron,untransl | 2 | 1000GENOMES,SNP500CANCER, | 2 | 0.986825 |
TYMS | chr 18 | 669186 | 669187 | rs35710611 | + | C | C/T | intron | 4 | 1000GENOMES,ILLUMINA,NHLBI-ESP,SNP500CANCER, | 2 | 0.988754 |
TYMS | chr 18 | 666532 | 666533 | rs36080427 | + | G | G/T | intron | 2 | 1000GENOMES,SNP500CANCER, | 2 | 0.986841 |
TYMS | chr 18 | 662246 | 662247 | rs3786362 | - | A | C/T | coding-synon | 11 | 1000GENOMES,CLINSEQ_SNP,GMI,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,PHARMGKB_AB_DME,SEATTLESEQ,SSMP, | 2 | 0.028828 |
TYMS | chr 18 | 670887 | 670888 | rs3826626 | - | T | A/G | intron,untransl | 12 | 1000GENOMES,BGI,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,GMI,ILLUMINA,NHLBI-ESP,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.913225 |
TYMS | chr 18 | 658422 | 658423 | rs3891167 | + | A | A/G | intron,near-gen | 17 | 1000GENOMES,ABI,BL,BUSHMAN,COMPLETE_GENOMICS,DEVINE_LAB,ENSEMBL,GMI,ILLUMINA-UK,PJP,SC_JCM,SEQUENOM, | 2 | 0.78503
|
TYMS | chr 18 | 657645 | 657701 | rs45445694 | + | CC | lengt | unknown | 1 | PHARMGKB_PAAR-SJCRH, | 6 | 0.428094 |
TYMS | chr 18 | 659176 | 659177 | rs4987088 | + | G | A/G | intron,near-gen | 3 | 1000GENOMES,PERLEGEN,SNP500CANCER, | 2 | 0.011754 |
TYMS | chr 18 | 659148 | 659149 | rs4987089 | + | A | A/G | intron,near-gen | 3 | 1000GENOMES,PERLEGEN,SNP500CANCER, | 2 | 0.98898
|
TYMS | chr 18 | 659235 | 659236 | rs502396 | + | C | C/T | intron,near-gen | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,KRIBB_YJKIM, | 2 | 0.627612 |
TYMS | chr 18 | 671049 | 671050 | rs523998 | - | T | A/G | intron,untransl | 5 | 1000GENOMES,ABI,BCM-HGSC-SUB,BL,SC_JCM, | 2 | 0.964915 |
TYMS | chr 18 | 666099 | 666100 | rs55688320 | + | A | A/C | intron | 7 | BCMHGSC_JDW,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,SSMP, | 2 | 0.25
|
TYMS | chr 18 | 666073 | 666074 | rs55742849 | + | A | A/G | intron | 8 | 1000GENOMES,BCMHGSC_JDW,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSMP, | 2 | 0.883349 |
TYMS | chr 18 | 665840 | 665841 | rs55867764 | + | G | A/G | intron | 4 | 1000GENOMES,GMI,HGSV,SSMP, | 2 | 0.01607
|
TYMS | chr 18 | 666031 | 666032 | rs55897736 | + | C | C/T | intron | 6 | 1000GENOMES,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,SSMP, | 2 | 0.931319 |
TYMS | chr 18 | 666096 | 666097 | rs55906508 | + | C | C/G | intron | 7 | BCMHGSC_JDW,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,SSMP, | 2 | 0.25
|
TYMS | chr 18 | 666036 | 666037 | rs56380264 | + | A | A/G | intron | 5 | 1000GENOMES,GMI,HGSV,HUMANGENOME_JCVI,SSMP, | 2 | 0.93945
|
TYMS | chr 18 | 665842 | 665843 | rs56405278 | + | T | C/T | intron | 4 | 1000GENOMES,GMI,HGSV,SSMP, | 2 | 0.011478 |
TYMS | chr 18 | 671976 | 671977 | rs60279109 | + | A | A/G | intron,untransl | 11 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF, | 2 | 0.517399 |
TYMS | chr 18 | 666932 | 666933 | rs62090121 | + | T | A/T | intron | 4 | 1000GENOMES,BCMHGSC_JDW,BL,ENSEMBL, | 2 | 0.099083 |
TYMS | chr 18 | 666938 | 666939 | rs62090122 | + | A | A/T | intron | 5 | 1000GENOMES,BCMHGSC_JDW,ENSEMBL,GMI,SSMP, | 2 | 0.674312 |
TYMS | chr 18 | 666962 | 666963 | rs62090123 | + | A | A/T | intron | 5 | 1000GENOMES,BCMHGSC_JDW,BL,ENSEMBL,SSMP, | 2 | 0.765138 |
TYMS | chr 18 | 660441 | 660442 | rs66567989 | + | A | -/A | intron | 8 | 1000GENOMES,BILGI_BIOE,DEVINE_LAB,HUMANGENOME_JCVI,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 0.072477 |
TYMS | chr 18 | 673015 | 673016 | rs699517 | + | C | C/T | untranslated-3 | 24 | 1000GENOMES,AFFY,BCMHGSC_JDW,BGI,BUSHMAN,CGAP-GAI,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILL | 2 | 0.520312 |
TYMS | chr 18 | 669760 | 669764 | rs72086130 | + | CT | -/CTC | intron | 6 | 1000GENOMES,BILGI_BIOE,BUSHMAN,DEVINE_LAB,LUNTER,SSMP, | 2 | 0.089908 |
TYMS | chr 18 | 658331 | 658332 | rs72634355 | + | C | C/T | intron,untransl | 7 | 1000GENOMES,BGI,BUSHMAN,GMI,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.712385 |
TYMS | chr 18 | 668519 | 668520 | rs72867160 | + | T | G/T | intron | 7 | 1000GENOMES,BL,BUSHMAN,GMI,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.072936 |
TYMS | chr 18 | 658000 | 658001 | rs73366471 | + | G | A/G | intron,nonsense | 7 | 1000GENOMES,COMPLETE_GENOMICS,EXOME_CHIP,ILLUMINA,NHLBI-ESP,SEATTLESEQ,TISHKOFF, | 2 | 0.019266 |
TYMS | chr 18 | 660155 | 660156 | rs73366479 | + | A | A/G | intron,near-gen | 3 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA, | 2 | 0.983945 |
TYMS | chr 18 | 658416 | 658417 | rs75047328 | + | G | G/T | intron,near-gen | 4 | 1000GENOMES,GMI,SSMP,TISHKOFF, | 2 | 0.989556 |
TYMS | chr 18 | 660366 | 660367 | rs75075985 | + | T | A/T | intron | 4 | 1000GENOMES,BGI,GMI,SSMP, | 2 | 0.072237 |
TYMS | chr 18 | 658034 | 658035 | rs77400748 | + | A | A/G | coding-synon,in | 4 | 1000GENOMES,GMI,NHLBI-ESP,SSMP, | 2 | 0.977961 |
TYMS | chr 18 | 669839 | 669840 | rs77404636 | + | T | C/T | intron | 4 | 1000GENOMES,BGI,GMI,SSMP, | 2 | 0.073977 |
TYMS | chr 18 | 667820 | 667821 | rs78835614 | + | C | C/T | intron | 5 | 1000GENOMES,BGI,GMI,ILLUMINA,SSMP, | 2 | 0.926458 |
TYMS | chr 18 | 664751 | 664752 | rs79833699 | + | C | C/T | intron | 4 | 1000GENOMES,ENSEMBL,GMI,SSMP, | 2 | 0.637156 |
TYMS | chr 18 | 666624 | 666625 | rs8088781 | + | C | C/T | intron | 7 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,SNP500CANCER,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.910945 |