Folate SNP Data

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Gene Symbol	Chromosome	Start	End	rs ID	Strand	NCBI ref	Observed	Function	Submitter Count	Submitter	Frequency Count	Allele Frequency
ABCB1	chr 7	87141496	87141497	rs1002204	-	A	G/T	intron	18	1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,COMPLETE_GENOMICS,GMI,GOLD,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMI	2	0.606376
ABCB1	chr 7	87141173	87141174	rs1002205	-	G	C/G	intron	15	1000GENOMES,ABI,BUSHMAN,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PHARMGKB_PHAT,PJP,SC_JCM,	2	0.775751
ABCB1	chr 7	87330100	87330101	rs1015415	-	A	A/T	intron	15	1000GENOMES,ABI,AFFY,BCM_SSAHASNP,BUSHMAN,GMI,ILLUMINA,ILLUMINA-UK,PERLEGEN,PJP,SSMP,TISHKOFF,TSC-CS	2	0.100248
ABCB1	chr 7	87199181	87199182	rs1016793	-	G	C/T	intron	13	1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,EGP_SNPS,ENSEMBL,GMI,HUMANGENOME_JCVI,SC_JCM,SI_EXO,SSM	2	0.677966
ABCB1	chr 7	87198458	87198459	rs1016794	-	G	C/T	intron	17	1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HUMAN	2	0.566442
ABCB1	chr 7	87273438	87273439	rs10224594	+	T	C/T	intron	4	1000GENOMES,GMI,SSMP,WUGSC_SSAHASNP,	2	0.056933
ABCB1	chr 7	87182036	87182037	rs10225464	+	G	A/G	intron	9	BGI,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,GMI,HGSV,HUMANGENOME_JCVI,WUGSC_SSAHASNP,	2	0.540146
ABCB1	chr 7	87154645	87154646	rs10225473	+	A	A/G	intron	9	1000GENOMES,AFFY,COMPLETE_GENOMICS,GOLD,ILLUMINA,KRIBB_YJKIM,SSMP,TISHKOFF,WUGSC_SSAHASNP,	2	0.864183
ABCB1	chr 7	87261579	87261580	rs10231033	+	A	A/G	intron	8	1000GENOMES,EGP_SNPS,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,WUGSC_SSAHASNP,	2	0.940018
ABCB1	chr 7	87271837	87271838	rs10233247	+	A	A/G	intron	9	1000GENOMES,ABI,CSHL-HAPMAP,GMI,ILLUMINA,KRIBB_YJKIM,SSAHASNP,SSMP,WUGSC_SSAHASNP,	2	0.926991
ABCB1	chr 7	87164891	87164892	rs10234411	+	T	A/T	intron	16	1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,GMI,GOLD,ILLUMINA-UK,PJP,SSAH	2	0.641944
ABCB1	chr 7	87162340	87162341	rs10236274	+	A	A/G	intron	11	1000GENOMES,ABI,AFFY,BUSHMAN,CSHL-HAPMAP,EGP_SNPS,GMI,KRIBB_YJKIM,SSMP,TISHKOFF,WUGSC_SSAHASNP,	2	0.804176
ABCB1	chr 7	87156190	87156191	rs10240953	+	G	G/T	intron	4	1000GENOMES,COMPLETE_GENOMICS,TISHKOFF,WUGSC_SSAHASNP,	2	0.96
ABCB1	chr 7	87198366	87198367	rs1024409	-	G	C/T	intron	9	1000GENOMES,ABI,EGP_SNPS,GMI,ILLUMINA,KRIBB_YJKIM,SSMP,TISHKOFF,TSC-CSHL,	2	0.926796
ABCB1	chr 7	87133850	87133851	rs10244116	+	A	A/G	intron	7	1000GENOMES,BUSHMAN,EGP_SNPS,HGSV,ILLUMINA-UK,PJP,WUGSC_SSAHASNP,	2	0.942121
ABCB1	chr 7	87188466	87188467	rs10244266	+	T	G/T	intron	11	1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,SSMP,TISHKOFF	2	0.138091
ABCB1	chr 7	87152510	87152511	rs10246696	+	G	A/G	intron	8	1000GENOMES,ABI,COMPLETE_GENOMICS,CSHL-HAPMAP,GOLD,SSMP,TISHKOFF,WUGSC_SSAHASNP,	2	0.130275
ABCB1	chr 7	87275640	87275641	rs10246878	+	A	A/G	intron	18	1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENO	2	0.110028
ABCB1	chr 7	87164985	87164986	rs10248420	+	A	A/G	intron	12	1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,GMI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,SSMP,TI	3	0.613673
ABCB1	chr 7	87296594	87296595	rs10254392	+	T	C/T	intron	7	1000GENOMES,CSHL-HAPMAP,EGP_SNPS,GMI,SC_SNP,SSMP,WUGSC_SSAHASNP,	2	0.05
ABCB1	chr 7	87200772	87200773	rs10256836	+	C	C/G	intron	21	1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,G	2	0.194984
ABCB1	chr 7	87200841	87200842	rs10259849	+	C	C/T	intron	20	1000GENOMES,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMA	2	0.18269
ABCB1	chr 7	87201481	87201482	rs10260862	+	G	C/G	intron	9	1000GENOMES,AFFY,COMPLETE_GENOMICS,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF,WUGSC_SSAHASNP,	2	0.223101
ABCB1	chr 7	87207612	87207613	rs10263741	+	C	C/T	intron	4	1000GENOMES,COMPLETE_GENOMICS,TISHKOFF,WUGSC_SSAHASNP,	2	0.961214
ABCB1	chr 7	87262580	87262581	rs10264856	+	G	A/G	intron	12	1000GENOMES,AFFY,BUSHMAN,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF,WUGSC_SSAH	2	0.180481
ABCB1	chr 7	87202614	87202615	rs10264990	+	C	C/T	intron	19	1000GENOMES,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA	2	0.220126
ABCB1	chr 7	87278759	87278760	rs10267099	+	G	A/G	intron	22	1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENS	2	0.846125
ABCB1	chr 7	87169668	87169669	rs10268314	+	T	C/T	intron	10	1000GENOMES,ABI,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ILLUMINA,KRIBB_YJKIM,SSMP,TISHKOFF,WUGSC_SSAH	2	0.147194
ABCB1	chr 7	87192256	87192257	rs10274441	+	A	A/G	intron	10	1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,HGSV,ILLUMINA-UK,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP,	2	0.876701
ABCB1	chr 7	87164482	87164483	rs10274587	+	G	A/G	intron	10	1000GENOMES,ABI,COMPLETE_GENOMICS,CSHL-HAPMAP,ILLUMINA,KRIBB_YJKIM,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP,	2	0.141519
ABCB1	chr 7	87134534	87134535	rs10274623	+	C	C/G/T	intron	6	1000GENOMES,COMPLETE_GENOMICS,EGP_SNPS,SSMP,TISHKOFF,WUGSC_SSAHASNP,	3	0.891801
ABCB1	chr 7	87275106	87275107	rs10275831	+	C	C/T	intron	7	1000GENOMES,CSHL-HAPMAP,GMI,ILLUMINA,KRIBB_YJKIM,SSMP,WUGSC_SSAHASNP,	2	0.940115
ABCB1	chr 7	87180197	87180198	rs10276036	+	C	C/T	intron	27	1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BGI,BL,BUSHMAN,CGM_KYOTO,CNG,COMPLETE_GENOMICS,EGP_SNPS,GMI,GSK-GE	2	0.489872
ABCB1	chr 7	87261735	87261736	rs10276499	+	T	C/T	intron	11	1000GENOMES,BUSHMAN,EGP_SNPS,GMI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF,WUGSC_SSAHA	2	0.182572
ABCB1	chr 7	87171526	87171527	rs10276603	+	T	C/T	intron	9	1000GENOMES,COMPLETE_GENOMICS,EGP_SNPS,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF,WUGSC_SSAHASNP,	3	0.127994
ABCB1	chr 7	87331964	87331965	rs10278483	+	T	C/T	intron	7	1000GENOMES,AFFY,GMI,ILLUMINA,KRIBB_YJKIM,SSMP,WUGSC_SSAHASNP,	2	0.068142
ABCB1	chr 7	87153584	87153585	rs10280101	+	A	A/C	intron	10	1000GENOMES,AFFY,COMPLETE_GENOMICS,GOLD,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF,WUGSC_SSAHASNP,	2	0.85548
ABCB1	chr 7	87202543	87202544	rs10280623	+	T	C/T	intron	10	1000GENOMES,AFFY,BCM-HGSC-SUB,COMPLETE_GENOMICS,ILLUMINA,KRIBB_YJKIM,PJP,SSMP,TISHKOFF,WUGSC_SSAHASN	2	0.202553
ABCB1	chr 7	87269581	87269582	rs10280686	+	A	A/T	intron	4	1000GENOMES,GMI,SSMP,WUGSC_SSAHASNP,	2	0.93946
ABCB1	chr 7	87138644	87138645	rs1045642	-	A	A/C/T	coding-synon	39	1000GENOMES,AFFY,AFFY_GWHS,BGI,BUSHMAN,CCHMC-CAE-PGCORE,CLINSEQ_SNP,COMPLETE_GENOMICS,CORNELL,EGP_SN	4	0.006619
ABCB1	chr 7	87278960	87278961	rs10486996	+	A	A/G	intron	6	1000GENOMES,AFFY,EGP_SNPS,PERLEGEN,SSMP,TISHKOFF,	2	0.975
ABCB1	chr 7	87255727	87255729	rs10600040	+	AT	-/AT	intron	3	1000GENOMES,DEVINE_LAB,SSMP,	2	0.094123
ABCB1	chr 7	87175910	87175911	rs10713802	+	G	-/G	intron	11	1000GENOMES,ABI,BILGI_BIOE,BUSHMAN,DEVINE_LAB,EGP_SNPS,GMI,LUNTER,PJP,SSMP,TISHKOFF,	2	0.336855
ABCB1	chr 7	87140807	87140808	rs10808071	+	A	A/G	intron	14	1000GENOMES,ABI,BCM-HGSC-SUB,COMPLETE_GENOMICS,CSHL-HAPMAP,GOLD,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKI	2	0.810279
ABCB1	chr 7	87176462	87176463	rs10808072	+	A	A/G	intron	18	1000GENOMES,ABI,AFFY,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,GOLD,HUMANGENOME_JCVI,ILL	2	0.543761
ABCB1	chr 7	87211913	87211914	rs111370386	+	T	C/T	intron	3	1000GENOMES,BUSHMAN,TISHKOFF,	2	0.011009
ABCB1	chr 7	87152529	87152530	rs111419501	+	G	A/G	intron	3	1000GENOMES,BUSHMAN,TISHKOFF,	2	0.013303
ABCB1	chr 7	87267686	87267687	rs111460021	+	G	A/G	intron	2	1000GENOMES,BUSHMAN,	2	0.025688
ABCB1	chr 7	87133976	87133977	rs111609902	+	T	C/T	intron	2	1000GENOMES,BCM-HGSC-SUB,	2	0.021579
ABCB1	chr 7	87209418	87209419	rs111736232	+	A	A/C	intron	3	1000GENOMES,BUSHMAN,TISHKOFF,	2	0.988991

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