Gene Symbol | Chromosome | Start | End | rs ID | Strand | NCBI ref | Observed | Function | Submitter Count | Submitter | Frequency Count | Allele Frequency |
---|
CUBN | chr 10 | 16918971 | 16918972 | rs1801241 | - | A | C/T | coding-synon | 19 | 1000GENOMES,BGI,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,GMI,HGBASE,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,NH | 2 | 0.185771 |
CUBN | chr 10 | 17087155 | 17087156 | rs1873469 | + | G | A/G | coding-synon | 13 | 1000GENOMES,BUSHMAN,CLINSEQ_SNP,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,SEATTLESEQ,SI_EX | 2 | 0.098406 |
CUBN | chr 10 | 16990551 | 16990552 | rs2271468 | + | G | A/G | coding-synon | 13 | 1000GENOMES,AFFY,BGI,CLINSEQ_SNP,GMI,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,SC_SNP,SEATTLESEQ,SSMP,TISHKOFF, | 2 | 0.08031
|
CUBN | chr 10 | 16949549 | 16949550 | rs3740165 | - | T | A/G | coding-synon | 13 | 1000GENOMES,BGI,BL,BUSHMAN,CLINSEQ_SNP,GMI,ILLUMINA,NHLBI-ESP,SEATTLESEQ,SSMP,TISHKOFF,WI_SSAHASNP,Y | 2 | 0.91081
|
CUBN | chr 10 | 17130198 | 17130199 | rs41289311 | + | G | A/G | coding-synon | 8 | 1000GENOMES,BGI,CLINSEQ_SNP,ILLUMINA,NHLBI-ESP,RSG_JCVI,SI_EXO,SSMP, | 2 | 0.032441 |
CUBN | chr 10 | 17157571 | 17157572 | rs41289313 | + | G | A/G | coding-synon | 9 | 1000GENOMES,BGI,BUSHMAN,CLINSEQ_SNP,ILLUMINA,NHLBI-ESP,RSG_JCVI,SI_EXO,SSMP, | 2 | 0.06451
|
CUBN | chr 10 | 16989271 | 16989272 | rs61841454 | + | G | A/G | coding-synon | 9 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,ILLUMINA,NHLBI-ESP,SSMP, | 2 | 0.057037 |
CUBN | chr 10 | 16882517 | 16882518 | rs703064 | - | T | A/G | coding-synon | 24 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,GMI,HG | 2 | 0.313265 |
DHFR | chr 5 | 79950716 | 79950717 | rs201906899 | + | C | C/T | coding-synon,un | 1 | 1000GENOMES, | 2 | 0.979339 |
DHFR | chr 5 | 79950707 | 79950708 | rs2405875 | + | T | C/T | coding-synon,un | 3 | 1000GENOMES,SSMP,TSC-CSHL, | 2 | 0.218549 |
DMGDH | chr 5 | 78328559 | 78328560 | rs1805072 | - | G | C/T | coding-synon | 20 | 1000GENOMES,BCMHGSC_JDW,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,GMI,HGBASE,HGSV,ILLUMINA,IL | 2 | 0.796173 |
DMGDH | chr 5 | 78351635 | 78351636 | rs2253262 | + | A | A/C | coding-synon | 25 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAP | 2 | 0.3638
|
DMGDH | chr 5 | 78340256 | 78340257 | rs248385 | - | C | C/G | coding-synon | 26 | 1000GENOMES,BCM-HGSC-SUB,BGI,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,GMI,HGBASE,HGSV,HUMANGENO | 2 | 0.572749 |
DNMT1 | chr 19 | 10267076 | 10267077 | rs2228611 | - | T | A/G | coding-synon | 27 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BL,BUSHMAN,CANCER-GENOME,CLINSEQ_SNP,COMPLETE_GENOMICS | 3 | 0.475085 |
DNMT1 | chr 19 | 10265592 | 10265593 | rs2228613 | - | G | A/C/G | coding-synon,mi | 11 | 1000GENOMES,BUSHMAN,CANCER-GENOME,CLINSEQ_SNP,ILLUMINA,NHLBI-ESP,PERLEGEN,SI_EXO,SSMP,TISHKOFF,WIAF- | 3 | 0.06326
|
DNMT1 | chr 19 | 10265311 | 10265312 | rs721186 | + | T | C/T | coding-synon | 23 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL- | 2 | 0.989835 |
DNMT3A | chr 2 | 25469501 | 25469502 | rs2276598 | + | C | C/T | coding-synon | 17 | 1000GENOMES,APPLERA_GI,BGI,BUSHMAN,CANCER-GENOME,CLINSEQ_SNP,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,N | 2 | 0.792311 |
DNMT3A | chr 2 | 25536826 | 25536827 | rs41284843 | + | G | A/G | coding-synon | 6 | 1000GENOMES,BUSHMAN,CANCER-GENOME,NHLBI-ESP,SI_EXO,SSMP, | 2 | 0.084862 |
DNMT3A | chr 2 | 25469627 | 25469628 | rs77345627 | + | C | C/T | coding-synon | 4 | 1000GENOMES,BUSHMAN,CLINSEQ_SNP,NHLBI-ESP, | 2 | 0.983865 |
DNMT3B | chr 20 | 31388076 | 31388077 | rs17123655 | + | C | C/T | coding-synon | 8 | 1000GENOMES,BUSHMAN,CANCER-GENOME,CLINSEQ_SNP,ILLUMINA,NHLBI-ESP,PERLEGEN,TISHKOFF, | 2 | 0.976115 |
DNMT3B | chr 20 | 31388079 | 31388080 | rs17123657 | + | C | C/T | coding-synon | 10 | 1000GENOMES,BUSHMAN,CANCER-GENOME,CLINSEQ_SNP,COMPLETE_GENOMICS,ILLUMINA,NHLBI-ESP,PERLEGEN,SEATTLES | 2 | 0.944407 |
DNMT3B | chr 20 | 31386448 | 31386449 | rs2424922 | + | T | C/T | coding-synon | 26 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CORNELL,ENSEMBL,EX | 2 | 0.64639
|
DNMT3B | chr 20 | 31367947 | 31367948 | rs6058885 | + | C | C/T | coding-synon,in | 11 | 1000GENOMES,BUSHMAN,CLINSEQ_SNP,ILLUMINA,ILLUMINA-UK,NHLBI-ESP,SC_SNP,SEATTLESEQ,SI_EXO,SSMP,TISHKOF | 2 | 0.921428 |
DNMT3B | chr 20 | 31386346 | 31386347 | rs6058891 | + | T | C/T | coding-synon | 24 | 1000GENOMES,ABI,APPLERA_GI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,ENS | 2 | 0.64577
|
DNMT3B | chr 20 | 31385027 | 31385028 | rs6119965 | + | C | C/T | coding-synon | 7 | 1000GENOMES,APPLERA_GI,BUSHMAN,ILLUMINA,NHLBI-ESP,SC_SNP,TISHKOFF, | 2 | 0.985473 |
FOLH1 | chr 11 | 49197415 | 49197416 | rs144950409 | + | A | A/G | coding-synon | 5 | 1000GENOMES,CLINSEQ_SNP,GMI,NHLBI-ESP,SSMP, | 2 | 0.914139 |
FOLH1 | chr 11 | 49207314 | 49207315 | rs182169 | - | A | C/T | coding-synon,in | 16 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,CLINSEQ_SNP,CSHL-HAPMAP,GMI,KWOK,NHLBI-ESP,SC_JCM,SSAHASNP,SSMP,TISHK | 4 | 0.011877 |
FOLH1 | chr 11 | 49221884 | 49221885 | rs202680 | - | T | A/T | coding-synon,in | 13 | 1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,CLINSEQ_SNP,CSHL-HAPMAP,ENSEMBL,GMI,KWOK,NHLBI-ESP,SC_JCM,SEATT | 2 | 0.646168 |
FOLH1 | chr 11 | 49196489 | 49196490 | rs202716 | + | T | C/T | coding-synon | 11 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,CLINSEQ_SNP,GMI,KWOK,SC_JCM,SSMP,TISHKOFF, | 2 | 0.269073 |
FOLH1 | chr 11 | 49208318 | 49208319 | rs79155991 | + | G | A/G | coding-synon,un | 6 | 1000GENOMES,CLINSEQ_SNP,EXOME_CHIP,GMI,NHLBI-ESP,TISHKOFF, | 2 | 0.016676 |
FOLR1 | chr 11 | 71906690 | 71906691 | rs61735636 | + | C | C/T | coding-synon | 1 | CORNELL, | 2 | 0.820513 |
FPGS | chr 9 | 130565325 | 130565326 | rs11554716 | + | G | A/G | coding-synon,ne | 5 | 1000GENOMES,CGAP-GAI,NHLBI-ESP,SEATTLESEQ,SSMP, | 2 | 0.051394 |
FTCD | chr 21 | 47557221 | 47557222 | rs10432965 | + | G | A/G | coding-synon | 12 | 1000GENOMES,CLINSEQ_SNP,COMPLETE_GENOMICS,CORNELL,GMI,ILLUMINA,NHLBI-ESP,PERLEGEN,SC_SNP,SEATTLESEQ, | 2 | 0.127509 |
FTCD | chr 21 | 47558472 | 47558473 | rs1047179 | - | G | C/G | coding-synon | 22 | 1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,BL,BUSHMAN,CGAP-GAI,COMPLETE_GENOMICS,CORNELL,CSHL-HAPMAP,ENSEM | 2 | 0.505804 |
FTCD | chr 21 | 47565779 | 47565780 | rs138803850 | + | G | C/G | coding-synon | 2 | 1000GENOMES,NHLBI-ESP, | 2 | 0.025253 |
FTCD | chr 21 | 47571844 | 47571845 | rs61729391 | + | C | C/T | coding-synon | 7 | 1000GENOMES,COMPLETE_GENOMICS,CORNELL,NHLBI-ESP,SEATTLESEQ,SSMP,TISHKOFF, | 2 | 0.926111 |
FTCD | chr 21 | 47557232 | 47557233 | rs61735838 | + | G | A/G | coding-synon | 1 | CORNELL, | 2 | 0.02
|
GIF | chr 11 | 59603363 | 59603364 | rs2867802 | + | G | A/G | coding-synon | 11 | 1000GENOMES,ABI,APPLERA_GI,CLINSEQ_SNP,GMI,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,SEATTLESEQ,SSMP,TSC-CSHL, | 2 | 0.012333 |
GIF | chr 11 | 59611361 | 59611362 | rs35792306 | + | G | A/G | coding-synon | 9 | 1000GENOMES,APPLERA_GI,CLINSEQ_SNP,GMI,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,SEATTLESEQ,SSMP, | 2 | 0.062763 |
ITPA | chr 20 | 3193977 | 3193978 | rs8362 | + | G | A/G | coding-synon,in | 25 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BUSHMAN,CGAP-GAI,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUM | 2 | 0.393069 |
ITPA | chr 20 | 3204083 | 3204084 | rs9101 | + | G | A/G | coding-synon,nc | 25 | 1000GENOMES,ABI,AFFY,APPLERA_GI,BCM-HGSC-SUB,BGI,BUSHMAN,CGAP-GAI,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSE | 2 | 0.271262 |
MAT1A | chr 10 | 82034853 | 82034854 | rs10788546 | + | T | C/T | coding-synon | 26 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CORNELL,CSHL-HAPMA | 2 | 0.764657 |
MAT1A | chr 10 | 82034841 | 82034842 | rs10887711 | + | A | A/G | coding-synon | 24 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CORNELL,CSHL-HAPMA | 2 | 0.229483 |
MAT1A | chr 10 | 82040051 | 82040052 | rs1143694 | - | A | C/T | coding-synon | 27 | 1000GENOMES,ABI,AFFY,APPLERA_GI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMIC | 2 | 0.79125
|
MAT1A | chr 10 | 82033593 | 82033594 | rs2993763 | + | G | A/G | coding-synon | 28 | 1000GENOMES,ABI,APPLERA_GI,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CSH | 3 | 0.542278 |
MAT2A | chr 2 | 85769710 | 85769711 | rs1078004 | - | C | C/G | coding-synon | 30 | 1000GENOMES,ABI,AFFY,BCM_SSAHASNP,BL,BUSHMAN,CGAP-GAI,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSE | 2 | 0.517224 |
MAT2B | chr 5 | 162940998 | 162940999 | rs11546512 | + | A | A/G | coding-synon | 11 | 1000GENOMES,CGAP-GAI,CLINSEQ_SNP,COMPLETE_GENOMICS,EXOME_CHIP,GMI,ILLUMINA,NHLBI-ESP,PERLEGEN,PHARMG | 2 | 0.889281 |
MMAB | chr 3 | 129152088 | 129152089 | rs140696 | - | G | C/T | coding-synon | 19 | 1000GENOMES,BUSHMAN,CANCER-GENOME,CLINSEQ_SNP,COMPLETE_GENOMICS,CORNELL,EGP_SNPS,EXOME_CHIP,HGSV,ILL | 2 | 0.858708 |
MTFMT | chr 15 | 65297260 | 65297261 | rs34636936 | + | C | C/T | coding-synon | 7 | 1000GENOMES,APPLERA_GI,CLINSEQ_SNP,COMPLETE_GENOMICS,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP, | 2 | 0.983577 |
MTFMT | chr 15 | 65295504 | 65295505 | rs35477493 | + | C | C/T | coding-synon | 8 | 1000GENOMES,APPLERA_GI,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,ILLUMINA,NHLBI-ESP,SSMP, | 2 | 0.9764
|
MTHFD1L | chr 6 | 151336738 | 151336739 | rs509474 | - | C | C/G | coding-synon | 29 | 1000GENOMES,ABI,APPLERA_GI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,CANCER-GENOME,CLINSEQ_SNP,COMPLET | 2 | 0.572312 |
MTHFD2L | chr 4 | 75065619 | 75065620 | rs200740046 | - | A | G/T | coding-synon | 2 | CLINSEQ_SNP,ILLUMINA, | 2 | 0.0595
|
MTHFR | chr 1 | 11854895 | 11854896 | rs2066462 | - | G | C/T | coding-synon | 15 | 1000GENOMES,BUSHMAN,CGM_KYOTO,CLINSEQ_SNP,EGP_SNPS,HGBASE,IMCJ-GDT,MGC_GENOME_DIFF,NHLBI-ESP,PHARMGK | 2 | 0.910388 |
MTHFR | chr 1 | 11863056 | 11863057 | rs2066470 | - | G | C/T | coding-synon | 23 | 1000GENOMES,APPLERA_GI,CGM_KYOTO,CLINSEQ_SNP,EGP_SNPS,GMI,HGBASE,HGSV,ILLUMINA,IMCJ-GDT,KRIBB_YJKIM, | 2 | 0.910381 |
MTHFR | chr 1 | 11848053 | 11848054 | rs34733339 | - | T | A/G | coding-synon,un | 8 | 1000GENOMES,CLINSEQ_SNP,HGSV,ILLUMINA,ILLUMINA-UK,SNP500CANCER,SSMP,TISHKOFF, | 2 | 0.981475 |
MTHFR | chr 1 | 11854456 | 11854457 | rs4846051 | + | G | A/G | coding-synon | 31 | 1000GENOMES,AFFY,APPLERA_GI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,CGM_KYOTO,CLINSEQ_S | 2 | 0.89699
|
MTR | chr 1 | 237058827 | 237058828 | rs1131449 | + | C | C/G/T | coding-synon | 28 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CORNELL,CSHL- | 3 | 0.455829 |
MTR | chr 1 | 237058747 | 237058748 | rs12030699 | + | C | C/T | coding-synon | 9 | 1000GENOMES,BGI,CLINSEQ_SNP,GMI,ILLUMINA,NHLBI-ESP,SC_SNP,SEATTLESEQ,SSMP, | 2 | 0.983051 |
MTR | chr 1 | 237058743 | 237058744 | rs12070777 | + | C | A/C | coding-synon | 17 | 1000GENOMES,BCMHGSC_JDW,BL,BUSHMAN,CLINSEQ_SNP,CORNELL,ENSEMBL,EXOME_CHIP,GMI,ILLUMINA,ILLUMINA-UK,N | 2 | 0.341709 |
MTR | chr 1 | 236992530 | 236992531 | rs201822712 | + | A | A/C | coding-synon | 1 | CLINSEQ_SNP, | 2 | 0.9485
|
MTR | chr 1 | 237054568 | 237054569 | rs2229276 | + | A | A/G | coding-synon | 20 | 1000GENOMES,AFFY,BL,BUSHMAN,CLINSEQ_SNP,CORNELL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,NHLBI-ESP, | 2 | 0.657908 |
MTRR | chr 5 | 7897282 | 7897283 | rs12347 | - | G | C/T | coding-synon | 26 | 1000GENOMES,ABI,APPLERA_GI,BUSHMAN,CGAP-GAI,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENO | 2 | 0.782141 |
MTRR | chr 5 | 7878191 | 7878192 | rs161870 | + | T | C/T | coding-synon | 23 | 1000GENOMES,ABI,APPLERA_GI,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KWOK, | 2 | 0.216049 |
MTRR | chr 5 | 7897318 | 7897319 | rs1802059 | + | G | A/G | coding-synon | 23 | 1000GENOMES,ABI,APPLERA_GI,BCMHGSC_JDW,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,GMI,HGBA | 2 | 0.296916 |
MTRR | chr 5 | 7889215 | 7889216 | rs2287779 | + | G | A/G | coding-synon | 16 | 1000GENOMES,AFFY,APPLERA_GI,BUSHMAN,CLINSEQ_SNP,GMI,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PHARMGKB_PPII,SEA | 2 | 0.04965
|
MTRR | chr 5 | 7893004 | 7893005 | rs34172797 | - | C | A/G | coding-synon | 8 | 1000GENOMES,APPLERA_GI,BUSHMAN,CLINSEQ_SNP,ILLUMINA,NHLBI-ESP,PHARMGKB_PPII,SI_EXO, | 2 | 0.019431 |
MTRR | chr 5 | 7892932 | 7892933 | rs35890938 | - | A | C/T | coding-synon | 8 | 1000GENOMES,APPLERA_GI,BUSHMAN,CLINSEQ_SNP,ILLUMINA,NHLBI-ESP,PHARMGKB_PPII,SI_EXO, | 2 | 0.018837 |
MTRR | chr 5 | 7897060 | 7897061 | rs6874544 | + | T | C/T | coding-synon | 12 | 1000GENOMES,ABI,APPLERA_GI,BCM_SSAHASNP,BUSHMAN,CLINSEQ_SNP,CSHL-HAPMAP,EXOME_CHIP,ILLUMINA,NHLBI-ES | 2 | 0.018671 |
SARDH | chr 9 | 136536678 | 136536679 | rs129932 | + | G | A/G | coding-synon | 26 | 1000GENOMES,ACEVAN,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CORNELL,ENS | 2 | 0.536276 |
SARDH | chr 9 | 136535746 | 136535747 | rs145913342 | + | G | A/G | coding-synon | 2 | 1000GENOMES,NHLBI-ESP, | 2 | 0.011019 |
SARDH | chr 9 | 136573411 | 136573412 | rs2073815 | - | G | C/T | coding-synon | 28 | 1000GENOMES,ABI,APPLERA_GI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,ENS | 2 | 0.538768 |
SARDH | chr 9 | 136561366 | 136561367 | rs2502740 | + | G | A/G | coding-synon | 18 | 1000GENOMES,APPLERA_GI,BCMHGSC_JDW,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,KRI | 2 | 0.25616
|
SARDH | chr 9 | 136536792 | 136536793 | rs2519123 | - | C | C/G | coding-synon | 21 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CORNELL,ENSEMBL,GMI,HGSV, | 2 | 0.568133 |
SARDH | chr 9 | 136561447 | 136561448 | rs35013479 | + | G | A/G | coding-synon | 4 | 1000GENOMES,APPLERA_GI,ILLUMINA,NHLBI-ESP, | 2 | 0.014857 |
SARDH | chr 9 | 136595252 | 136595253 | rs35457000 | + | C | C/T | coding-synon | 5 | 1000GENOMES,APPLERA_GI,ILLUMINA,NHLBI-ESP,TISHKOFF, | 2 | 0.984715 |
SARDH | chr 9 | 136599145 | 136599146 | rs573904 | + | C | C/T | coding-synon | 16 | 1000GENOMES,BCM-HGSC-SUB,BGI,BL,CLINSEQ_SNP,CORNELL,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,NHLBI- | 2 | 0.776438 |
SHMT1 | chr 17 | 18232135 | 18232136 | rs116100382 | + | G | A/G | coding-synon | 5 | 1000GENOMES,CLINSEQ_SNP,ILLUMINA,NHLBI-ESP,TISHKOFF, | 2 | 0.018245 |
SHMT2 | chr 12 | 57626017 | 57626018 | rs11557166 | + | C | C/T | coding-synon,nc | 11 | 1000GENOMES,CGAP-GAI,CLINSEQ_SNP,GMI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,NHLBI-ESP,SEATTLESEQ,SSMP,TISH | 2 | 0.976028 |
SHMT2 | chr 12 | 57626581 | 57626582 | rs2229716 | + | G | A/G | coding-synon,nc | 11 | 1000GENOMES,BCM-HGSC-SUB,CGAP-GAI,CLINSEQ_SNP,ILLUMINA,KRIBB_YJKIM,MGC_GENOME_DIFF,NHLBI-ESP,PERLEGE | 2 | 0.026497 |
SHMT2 | chr 12 | 57627073 | 57627074 | rs2229717 | + | G | G/T | coding-synon,nc | 9 | 1000GENOMES,APPLERA_GI,CLINSEQ_SNP,GMI,ILLUMINA,NHLBI-ESP,SEATTLESEQ,SSMP,WICVAR, | 2 | 0.951922 |
SHMT2 | chr 12 | 57627861 | 57627862 | rs2229718 | + | C | C/T | coding-synon,nc | 1 | WICVAR, | 2 | 0.962963 |
SLC19A1 | chr 21 | 46952005 | 46952006 | rs1051269 | - | G | C/G | coding-synon | 8 | 1000GENOMES,CLINSEQ_SNP,ILLUMINA,KRIBB_YJKIM,LEE,NHLBI-ESP,PHARMGKB_AB_DME,SNP500CANCER, | 2 | 0.99
|
SLC19A1 | chr 21 | 46951555 | 46951556 | rs12659 | - | A | C/T | coding-synon | 27 | 1000GENOMES,ABI,APPLERA_GI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,CGAP-GAI,CLINSEQ_SNP,COMPLETE_GEN | 2 | 0.560144 |
SLC19A1 | chr 21 | 46950862 | 46950863 | rs79091853 | + | C | C/T | coding-synon | 5 | 1000GENOMES,CLINSEQ_SNP,ILLUMINA,NHLBI-ESP,SSMP, | 2 | 0.981272 |
SLC46A1 | chr 17 | 26731724 | 26731725 | rs35257694 | + | G | A/G | coding-synon | 2 | APPLERA_GI,NHLBI-ESP, | 2 | 0.014706 |
SLC46A1 | chr 17 | 26732288 | 26732289 | rs61732735 | + | G | C/G | coding-synon | 1 | CORNELL, | 2 | 0.986486 |
TCN1 | chr 11 | 59623432 | 59623433 | rs1042613 | - | G | C/T | coding-synon | 20 | 1000GENOMES,AFFY,APPLERA_GI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,GMI,ILLUMINA,KRIBB_YJKIM,LEE,MG | 2 | 0.703753 |
TCN2 | chr 22 | 31013392 | 31013393 | rs35997415 | + | C | C/G | coding-synon | 1 | APPLERA_GI, | 2 | 0.986842 |
TCN2 | chr 22 | 31013398 | 31013399 | rs76802001 | + | G | A/G | coding-synon | 4 | 1000GENOMES,CLINSEQ_SNP,ILLUMINA,NHLBI-ESP, | 2 | 0.022846 |
TYMS | chr 18 | 662246 | 662247 | rs3786362 | - | A | C/T | coding-synon | 11 | 1000GENOMES,CLINSEQ_SNP,GMI,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,PHARMGKB_AB_DME,SEATTLESEQ,SSMP, | 2 | 0.028828 |
TYMS | chr 18 | 658034 | 658035 | rs77400748 | + | A | A/G | coding-synon,in | 4 | 1000GENOMES,GMI,NHLBI-ESP,SSMP, | 2 | 0.977961 |