CmrC

  miRNA Cluster

miRNA Cluster : hsa-mir-3064/mir-5047

Chromosome : chr17

Genomic Location : 64500774-64501313

No. of Candidates : 2




Multiple TSS are identified for some miRNA clusters

TSS GRCh19 : 62502406

TSS GRCh38 : 64506288

  miRNA Cluster Candidates
miRNA miRBase ID Chromosome Start End Strand
hsa-mir-5047 MI0017932 Chr17 64501214 64501313 -
hsa-mir-3064 MI0017375 Chr17 64500774 64500839 -

  miRNA Cluster and CNV co-localization

Cancer Abberation Kind Chromosome CNV Start CNV End Size [bp] Overlap [bp]
BLCA Amp chr17 59836174 76741926 16824474 539
BRCA Amp chr17 48606895 82959140 34232760 539
CESC Amp chr17 64226762 66550164 2242161 539
COAD Amp chr17 64464879 64661066 196189 539
COADREAD Amp chr17 61467414 64908461 3359805 539
GBM Amp chr17 63510431 64867684 1276011 539
KIPAN Amp chr17 59845081 70044239 10117939 539
KIRC Amp chr17 60002609 66769004 6685153 539
KIRP Amp chr17 64226762 66272914 1964911 539
LIHC Amp chr17 57141192 82959140 25698464 539
LUAD Amp chr17 61404012 82955029 21431533 539
LUSC Amp chr17 61533724 82582967 20929759 539
MESO Amp chr17 62058111 71004113 8864783 539
OV Amp chr17 64226762 82959140 18612895 539
PCPG Amp chr17 61316404 81671472 20244738 539
READ Amp chr17 64483156 64529843 46689 539
SKCM Amp chr17 56703053 82955029 26132492 539
UVM Amp chr17 55910721 64787495 8795532 539

  Genome Browser

  Chromosome Fragile site Association

 No overlapping fragile site with this miRNA cluster