CmrC

  miRNA Cluster

miRNA Cluster : hsa-mir-142/mir-4736

Chromosome : chr17

Genomic Location : 58331232-58336022

No. of Candidates : 2




Multiple TSS are identified for some miRNA clusters

TSS GRCh19 : 56409880

TSS GRCh38 : 58332519

  miRNA Cluster Candidates
miRNA miRBase ID Chromosome Start End Strand
hsa-mir-4736 MI0017373 Chr17 58335976 58336022 -
hsa-mir-142 MI0000458 Chr17 58331232 58331318 -

  miRNA Cluster and CNV co-localization

Cancer Abberation Kind Chromosome CNV Start CNV End Size [bp] Overlap [bp]
BLCA Amp chr17 58277664 58570351 292688 4790
BRCA Amp chr17 48606895 82959140 34232760 4790
CESC Amp chr17 58207721 58565748 358028 4790
COADREAD Amp chr17 58272562 58404984 132423 4790
GBM Amp chr17 58257234 58374760 117527 4790
GBMLGG Amp chr17 58270678 58366582 95905 4790
KIPAN Amp chr17 57852014 58907336 1055323 4790
KIRP Amp chr17 57852014 58931679 1079666 4790
LGG Amp chr17 58270678 58366582 95905 4790
LIHC Amp chr17 57141192 82959140 25698464 4790
LUAD Amp chr17 57857523 58889863 1032341 4790
LUSC Amp chr17 58272562 58550586 278025 4790
MESO Amp chr17 57925864 61038032 3112169 4790
PCPG Amp chr17 52058911 59110368 7051459 4790
READ Amp chr17 58113623 58857443 743821 4790
SKCM Amp chr17 56703053 82955029 26132492 4790
UVM Amp chr17 55910721 64787495 8795532 4790

  Genome Browser

  Chromosome Fragile site Association

 No overlapping fragile site with this miRNA cluster