CmrC

  miRNA Cluster

miRNA Cluster : hsa-mir-17/mir-92a-1

Chromosome : chr13

Genomic Location : 91350605-91351391

No. of Candidates : 6




Multiple TSS are identified for some miRNA clusters

TSS GRCh19 : 91999940

TSS GRCh38 : 91347686

  miRNA Cluster Candidates
miRNA miRBase ID Chromosome Start End Strand
hsa-mir-17 MI0000071 Chr13 91350605 91350688 +
hsa-mir-18a MI0000072 Chr13 91350751 91350821 +
hsa-mir-19a MI0000073 Chr13 91350891 91350972 +
hsa-mir-20a MI0000076 Chr13 91351065 91351135 +
hsa-mir-19b-1 MI0000074 Chr13 91351192 91351278 +
hsa-mir-92a-1 MI0000093 Chr13 91351314 91351391 +

  miRNA Cluster and CNV co-localization

Cancer Abberation Kind Chromosome CNV Start CNV End Size [bp] Overlap [bp]
BRCA Amp chr13 91319238 91355604 36367 786
CESC Amp chr13 91020730 91353698 332969 786
LIHC Amp chr13 91079101 91355604 276504 786
LUAD Amp chr13 91203141 91664326 461186 786
LUSC Amp chr13 91271118 92336822 1065704 786
OV Amp chr13 91287877 91409815 121939 786
SKCM Amp chr13 91249366 91404657 155292 786
UCS Amp chr13 90672006 91355604 683599 786

  Genome Browser

  Chromosome Fragile site Association

 No overlapping fragile site with this miRNA cluster