CmrC

  miRNA Cluster

miRNA Cluster : hsa-mir-215/mir-194-1

Chromosome : chr1

Genomic Location : 220117853-220118241

No. of Candidates : 2




Multiple TSS are identified for some miRNA clusters

TSS GRCh19 : 220292454

TSS GRCh38 : 220119112

  miRNA Cluster Candidates
miRNA miRBase ID Chromosome Start End Strand
hsa-mir-194-1 MI0000488 Chr1 220118157 220118241 -
hsa-mir-215 MI0000291 Chr1 220117853 220117962 -

  miRNA Cluster and CNV co-localization

Cancer Abberation Kind Chromosome CNV Start CNV End Size [bp] Overlap [bp]
ACC Amp chr1 219778611 220344073 565463 388
BRCA Amp chr1 149907993 247650404 97934162 388
CESC Amp chr1 204300255 233823659 29690023 388
CHOL Amp chr1 218020173 225503386 7497574 388
COAD Amp chr1 149913375 221405132 71693548 388
COADREAD Amp chr1 149909846 247650404 97932309 388
ESCA Amp chr1 219760656 220215120 454465 388
HNSC Amp chr1 218020173 247650404 29620192 388
KIPAN Amp chr1 217979009 220939709 2960701 388
KIRC Amp chr1 219944508 220939709 995202 388
KIRP Amp chr1 217558527 227963019 10418852 388
LIHC Amp chr1 149907993 247650404 97934162 388
LUAD Amp chr1 149907993 247650404 97934162 388
LUSC Amp chr1 149907993 247650404 97934162 388
MESO Amp chr1 219959397 223779649 3834613 388
OV Amp chr1 219788970 220695102 906133 388
PAAD Amp chr1 216410371 226817303 10421292 388
PCPG Amp chr1 218832678 222072248 3239571 388
READ Amp chr1 219944508 220939709 995202 388
SARC Del chr1 219604126 220223030 618905 388
SKCM Amp chr1 149909846 247650404 97932309 388
STAD Amp chr1 218835556 220619989 1784434 388
THCA Amp chr1 219959397 230315666 10318674 388
THYM Amp chr1 219231724 220695102 1463379 388
UCEC Amp chr1 149907993 247650404 97934162 388
UCS Amp chr1 214538003 221882738 7344735 388
UVM Amp chr1 219944508 225915663 5985514 388

  Genome Browser

  Chromosome Fragile site Association

 No overlapping fragile site with this miRNA cluster