CmrC

  miRNA Cluster

miRNA Cluster : hsa-mir-99a/let-7c

Chromosome : chr21

Genomic Location : 16539089-16539911

No. of Candidates : 2




Multiple TSS are identified for some miRNA clusters

TSS GRCh19 : 17791721

TSS GRCh38 : 16419401

  miRNA Cluster Candidates
miRNA miRBase ID Chromosome Start End Strand
hsa-mir-99a MI0000101 Chr21 16539089 16539169 +
hsa-let-7c MI0000064 Chr21 16539828 16539911 +

  miRNA Cluster and CNV co-localization

Cancer Abberation Kind Chromosome CNV Start CNV End Size [bp] Overlap [bp]
BRCA Del chr21 16449916 19127151 2677234 822
COAD Del chr21 16362365 16558085 195720 822
COADREAD Del chr21 16394859 16627266 232407 822
GBM Amp chr21 16499353 16576849 77497 822
GBMLGG Del chr21 16525627 16543888 18262 822
GBMLGG Amp chr21 16499353 16576849 77497 822
HNSC Amp chr21 16325414 16547818 222404 822
KICH Del chr21 16222084 17154545 932460 822
KIPAN Del chr21 16511744 16549115 37372 822
KIRC Del chr21 16511744 16549115 37372 822
KIRP Del chr21 13975300 23920793 9945489 822
LUAD Amp chr21 16531868 16541351 9484 822
LUSC Amp chr21 16535690 16913325 377636 822
UCEC Del chr21 15954381 16576849 622469 822
UVM Amp chr21 14727101 18197898 3470794 822

  Genome Browser

  Chromosome Fragile site Association

 No overlapping fragile site with this miRNA cluster