Riboflavin SNP Data

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Gene Symbol	Chromosome	Start	End	rs ID	Strand	NCBI ref	Observed	Class	Function	Submitter Count	Submitter	Frequency Count	Allele Frequency
ACAD9	chr3	128598469	128598471	rs28384401	+	GT	-/GT	deletion	ncRNA,untranslated-5	10	1000GENOMES,ABI,BUSHMAN,DEVINE_LAB,GMI,KYUGEN,LUNTER,PJP,SSMP,TISHKOFF,	2	0.454170
ACAD9	chr3	128598478	128598480	rs200105043	+	TC	-/TC	deletion	ncRNA,untranslated-5	1	1000GENOMES,	2	0.364096
ACAD9	chr3	128598490	128598490	rs28384402	+	-	-/TAAG	insertion	ncRNA,untranslated-5	5	1000GENOMES,BCMHGSC_JDW,KYUGEN,LUNTER,TISHKOFF,	2	0.947199
ACAD9	chr3	128599109	128599110	rs73207996	+	C	C/G	single	intron	1	1000GENOMES,	2	0.967363
ACAD9	chr3	128599142	128599143	rs16852013	+	T	C/T	single	intron	5	1000GENOMES,BCMHGSC_JDW,ENSEMBL,PERLEGEN,SSMP,	2	0.034985
ACAD9	chr3	128599276	128599278	rs145906822	+	AG	-/AG	deletion	intron	1	1000GENOMES,	2	0.010560
ACAD9	chr3	128599978	128599979	rs62268183	+	A	A/G	single	intron	5	1000GENOMES,BCMHGSC_JDW,ENSEMBL,ILLUMINA,SSMP,	2	0.962385
ACAD9	chr3	128600228	128600229	rs789225	+	G	A/G	single	intron	18	1000GENOMES,ABI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KWOK,SC_JCM,SEQUENOM,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,	2	0.509572
ACAD9	chr3	128600237	128600238	rs789226	+	G	C/G	single	intron	19	1000GENOMES,ABI,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KWOK,PJP,SC_JCM,SEQUENOM,SSAHASNP,TISHKOFF,WI_SSAHASNP,	2	0.624544
ACAD9	chr3	128600375	128600376	rs58315986	+	T	C/T	single	intron	6	1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,HGSV,ILLUMINA-UK,TISHKOFF,	2	0.082875
ACAD9	chr3	128600572	128600573	rs57650757	+	C	C/T	single	intron	4	1000GENOMES,HGSV,ILLUMINA-UK,TISHKOFF,	2	0.983486
ACAD9	chr3	128600584	128600585	rs789227	+	C	C/G	single	intron	16	1000GENOMES,ABI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,	2	0.661810
ACAD9	chr3	128600604	128600605	rs114156198	+	T	C/T	single	intron	2	1000GENOMES,TISHKOFF,	2	0.019599
ACAD9	chr3	128600884	128600885	rs36120249	+	C	C/G	single	intron	10	1000GENOMES,ABI,BCM-HGSC-SUB,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF,	2	0.886447
ACAD9	chr3	128600949	128600950	rs34610706	+	A	-/A	deletion	intron	10	1000GENOMES,ABI,BILGI_BIOE,DEVINE_LAB,GMI,HGSV,LUNTER,PJP,SSMP,TISHKOFF,	2	0.507333
ACAD9	chr3	128601049	128601050	rs789228	+	A	A/G	single	intron	18	1000GENOMES,ABI,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KWOK,PJP,SC_JCM,SSMP,TISHKOFF,	2	0.536287
ACAD9	chr3	128601944	128601945	rs60880885	+	T	C/T	single	intron	4	1000GENOMES,COMPLETE_GENOMICS,HGSV,ILLUMINA-UK,	2	0.018790
ACAD9	chr3	128602134	128602135	rs13323787	+	G	G/T	single	intron	9	1000GENOMES,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,HGSV,ILLUMINA-UK,PJP,SSMP,TISHKOFF,	2	0.879342
ACAD9	chr3	128602331	128602332	rs7613576	+	C	C/G	single	intron	7	1000GENOMES,BCM_SSAHASNP,COMPLETE_GENOMICS,HGSV,PJP,TISHKOFF,WI_SSAHASNP,	2	0.936297
ACAD9	chr3	128602346	128602347	rs60564561	+	C	C/T	single	intron	3	1000GENOMES,COMPLETE_GENOMICS,HGSV,	2	0.981651
ACAD9	chr3	128602525	128602526	rs789229	+	C	C/T	single	intron	17	1000GENOMES,ABI,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,WI_SSAHASNP,	2	0.544252
ACAD9	chr3	128602557	128602558	rs789230	+	G	A/G	single	intron	19	1000GENOMES,ABI,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SSMP,TISHKOFF,WI_SSAHASNP,	2	0.484412
ACAD9	chr3	128602846	128602847	rs789231	-	A	C/T	single	intron	21	1000GENOMES,ABI,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,	2	0.484687
ACAD9	chr3	128602863	128602864	rs73208001	+	G	A/G	single	intron	1	1000GENOMES,	2	0.032637
ACAD9	chr3	128603079	128603080	rs789232	-	T	A/C	single	intron	18	1000GENOMES,ABI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,KWOK,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,	2	0.664240
ACAD9	chr3	128603149	128603150	rs789233	+	G	G/T	single	intron	22	1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,	2	0.452150
ACAD9	chr3	128603295	128603296	rs75748817	+	T	C/T	single	intron	3	1000GENOMES,SSMP,TISHKOFF,	2	0.054222
ACAD9	chr3	128603884	128603885	rs114697716	+	G	A/G	single	intron	1	1000GENOMES,	2	0.010453
ACAD9	chr3	128604325	128604326	rs6439147	+	T	C/T	single	intron	18	1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,	2	0.974310
ACAD9	chr3	128604782	128604783	rs62268184	+	C	C/T	single	intron	5	1000GENOMES,BCMHGSC_JDW,ENSEMBL,SSMP,TISHKOFF,	2	0.945413
ACAD9	chr3	128604874	128604875	rs115162374	+	A	A/T	single	intron	2	1000GENOMES,SSMP,	2	0.944686
ACAD9	chr3	128605145	128605146	rs142318752	+	A	A/G	single	intron	2	1000GENOMES,SSMP,	2	0.985767
ACAD9	chr3	128605206	128605207	rs151252651	+	G	A/G	single	intron	1	1000GENOMES,	2	0.019284
ACAD9	chr3	128605322	128605323	rs112849932	+	G	G/T	single	intron	3	1000GENOMES,COMPLETE_GENOMICS,TISHKOFF,	2	0.921560
ACAD9	chr3	128605341	128605342	rs180819009	+	G	A/G	single	intron	1	1000GENOMES,	2	0.010101
ACAD9	chr3	128605417	128605418	rs146649430	+	G	G/T	single	intron	2	1000GENOMES,SSMP,	2	0.945822
ACAD9	chr3	128605419	128605420	rs141418644	+	A	A/G	single	intron	2	1000GENOMES,SSMP,	2	0.944904
ACAD9	chr3	128605511	128605512	rs111601497	+	C	-/C	deletion	intron	8	1000GENOMES,BILGI_BIOE,BL,BUSHMAN,GMI,LUNTER,PJP,SSMP,	2	0.444954
ACAD9	chr3	128605762	128605763	rs13076403	+	G	C/G	single	intron	16	1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,	2	0.632865
ACAD9	chr3	128605910	128605910	rs200085741	+	-	-/G	insertion	intron	4	1000GENOMES,LUNTER,SSMP,TISHKOFF,	2	0.943985
ACAD9	chr3	128606066	128606067	rs58943552	+	C	C/T	single	intron	6	1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,HGSV,ILLUMINA-UK,TISHKOFF,	2	0.917087
ACAD9	chr3	128606067	128606068	rs115893744	+	G	A/G	single	intron	2	1000GENOMES,TISHKOFF,	2	0.019164
ACAD9	chr3	128606176	128606177	rs112651258	+	G	A/G	single	intron	2	1000GENOMES,BUSHMAN,	2	0.010092
ACAD9	chr3	128606292	128606293	rs3898708	-	T	A/C/T	single	intron	3	1000GENOMES,SSMP,TSC-CSHL,	2	0.942944
ACAD9	chr3	128606293	128606294	rs80185795	+	T	C/T	single	intron	2	1000GENOMES,SSMP,	2	0.055050
ACAD9	chr3	128606321	128606322	rs2630259	+	C	C/T	single	intron	14	1000GENOMES,ABI,BCM_SSAHASNP,BUSHMAN,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_JCM,SSAHASNP,SSMP,	2	0.548903
ACAD9	chr3	128606476	128606477	rs138877082	+	A	A/T	single	intron	1	1000GENOMES,	2	0.911387
ACAD9	chr3	128606762	128606763	rs62268185	+	G	C/G	single	intron	4	1000GENOMES,BCMHGSC_JDW,ENSEMBL,SSMP,	2	0.054587
ACAD9	chr3	128607151	128607152	rs116785349	+	T	C/T	single	intron	3	1000GENOMES,SSMP,TISHKOFF,	2	0.054878
ACAD9	chr3	128607233	128607234	rs62268186	+	C	C/T	single	intron	4	1000GENOMES,BCMHGSC_JDW,ENSEMBL,SSMP,	2	0.961927

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