Gene Symbol | Chromosome | Start | End | rs ID | Strand | NCBI ref | Observed | Class | Function | Submitter Count | Submitter | Frequency Count | Allele Frequency |
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MTRR | chr5 | 7858978 | 7858982 | rs4001965 | - | CAAT | -/ATTG | deletion | near-gene-3 | 6 | 1000GENOMES,BUSHMAN,GMI,LUNTER,SSMP,TSC-CSHL, | 2 | 0.083486 |
MTRR | chr5 | 7859077 | 7859078 | rs17183828 | + | G | C/G | single | near-gene-3 | 2 | 1000GENOMES,PERLEGEN, | 2 | 0.013793 |
MTRR | chr5 | 7859128 | 7859129 | rs74497754 | + | C | C/G | single | near-gene-3 | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.965592 |
MTRR | chr5 | 7901635 | 7901636 | rs67704418 | + | C | A/C | single | near-gene-3 | 5 | 1000GENOMES,BGI,GMI,ILLUMINA,SSMP, | 2 | 0.136435 |
IYD | chr6 | 150725877 | 150725878 | rs78609214 | + | A | A/G | single | near-gene-3 | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.973432 |
IYD | chr6 | 150725900 | 150725901 | rs9480378 | + | G | A/G | single | near-gene-3 | 6 | 1000GENOMES,ILLUMINA,ILLUMINA-UK,PJP,SC_SNP,TISHKOFF, | 2 | 0.085000 |
IYD | chr6 | 150726041 | 150726042 | rs805996 | - | C | G/T | single | near-gene-3 | 16 | 1000GENOMES,BCMHGSC_JDW,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SSMP,TISHKOFF, | 2 | 0.696686 |
IYD | chr6 | 150726096 | 150726097 | rs13197942 | + | G | G/T | single | near-gene-3 | 11 | 1000GENOMES,BCM-HGSC-SUB,ENSEMBL,HGSV,HUMANGENOME_JCVI,ILLUMINA,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.929645 |
IYD | chr6 | 150726103 | 150726104 | rs76819727 | + | C | C/T | single | near-gene-3 | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.982143 |
IYD | chr6 | 150726127 | 150726128 | rs78244760 | + | G | A/G | single | near-gene-3 | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.020035 |
IYD | chr6 | 150726152 | 150726153 | rs74678912 | + | T | G/T | single | near-gene-3 | 3 | 1000GENOMES,ILLUMINA,SSMP, | 2 | 0.019040 |
DLD | chr7 | 107561744 | 107561745 | rs111877251 | + | C | C/T | single | near-gene-3 | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.989904 |
DLD | chr7 | 107561869 | 107561870 | rs147337197 | + | T | C/T | single | near-gene-3 | 1 | 1000GENOMES, | 2 | 0.011938 |
DLD | chr7 | 107561942 | 107561943 | rs10241006 | + | A | A/T | single | near-gene-3 | 8 | 1000GENOMES,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.708983 |
DLD | chr7 | 107562089 | 107562090 | rs10270742 | + | C | C/G | single | near-gene-3 | 7 | 1000GENOMES,BCM-HGSC-SUB,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.720183 |
POR | chr7 | 75544633 | 75544634 | rs3735508 | - | G | C/T | single | intron,near-gene-3 | 4 | ILLUMINA,KRIBB_YJKIM,PERLEGEN,YUSUKE, | 2 | 0.697368 |
POR | chr7 | 75573343 | 75573344 | rs73363952 | + | T | C/T | single | intron,near-gene-3 | 4 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.077452 |
POR | chr7 | 75573560 | 75573561 | rs239957 | - | A | C/T | single | intron,near-gene-3 | 22 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.432420 |
POR | chr7 | 75573569 | 75573570 | rs114434389 | + | T | C/T | single | intron,near-gene-3 | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.025261 |
POR | chr7 | 75573572 | 75573573 | rs13239263 | + | A | A/G | single | intron,near-gene-3 | 8 | 1000GENOMES,ABI,BCMHGSC_JDW,ENSEMBL,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP, | 2 | 0.981685 |
POR | chr7 | 75573710 | 75573711 | rs57779864 | + | C | C/T | single | intron,near-gene-3 | 5 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,HGSV,TISHKOFF, | 2 | 0.922513 |
SLC52A2 | chr8 | 145578811 | 145578812 | rs4515595 | - | G | C/T | single | near-gene-3,near-gene-5 | 12 | 1000GENOMES,ABI,BCM-HGSC-SUB,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,PJP,SC_JCM,SSMP,TISHKOFF, | 2 | 0.710430 |