Cobalamin SNPs in CpG Data


Gene SymbolChromosomeCpG StartCpG EndNameSNP StartSNP EndrsIDStrandref NCBIObservedNo of CpGsCpG%GC%Observed/Expected RatioFunction
MTRchr1236958314236959202CpG: 84236959081236959082rs10399834+CC/T57118.964.30.92intron
MTRchr1236958314236959202CpG: 84236958802236958803rs111840642+CC/G57118.964.30.92untranslated-5
MTRchr1236958314236959202CpG: 84236958382236958383rs28372868+AA/C57118.964.30.92near-gene-5
MTRchr1236958314236959202CpG: 84236958477236958478rs28372869+TA/T57118.964.30.92near-gene-5
MTRchr1236958314236959202CpG: 84236958514236958515rs28372870+CC/T57118.964.30.92near-gene-5
MTRchr1236958314236959202CpG: 84236958531236958532rs28372871+GG/T57118.964.30.92near-gene-5
MTRchr1236958314236959202CpG: 84236958936236958937rs3738547-CA/G57118.964.30.92untranslated-5
MMACHCchr14596558645966049CpG: 334596570245965703rs3748643+GG/T25814.355.70.92near-gene-5,ncRNA
MMACHCchr14596558645966049CpG: 334596577045965771rs3748644+AA/G25814.355.70.92near-gene-5
MMABchr12110010994110011599CpG: 53110011228110011229rs10774774+GG/T39017.564.50.85coding-synon,near-gene-5,
MMABchr12110010994110011599CpG: 53110011229110011230rs10774775+CC/T39017.564.50.85near-gene-5,ncRNA,missens
ABCD4chr147476936674769815CpG: 477476972974769730rs72559441+GA/G31220.969.50.87ncRNA,untranslated-5
FUT2chr194920644349206818CpG: 264920663049206631rs1047781+AA/T24713.965.90.65missense
FUT2chr194920644349206818CpG: 264920672649206727rs1800025+GA/G24713.965.90.65missense
FUT2chr194920644349206818CpG: 264920672549206726rs1800027+CC/T24713.965.90.65coding-synon
FUT2chr194920644349206818CpG: 264920660249206603rs281377+CC/T24713.965.90.65coding-synon
FUT2chr194920644349206818CpG: 264920656049206561rs28362836+CC/T24713.965.90.65coding-synon
FUT2chr194920644349206818CpG: 264920667349206674rs601338+GA/G24713.965.90.65nonsense
FUT2chr194920644349206818CpG: 264920646149206462rs681343+CC/T24713.965.90.65coding-synon
MMAAchr4146540053146540656CpG: 66146540610146540611rs114699496+CC/T41821.969.30.91intron
MMAAchr4146540053146540656CpG: 66146540156146540157rs117832435+GA/G41821.969.30.91near-gene-5
MMAAchr4146540053146540656CpG: 66146540594146540595rs140592995+GC/G41821.969.30.91intron
MMAAchr4146540053146540656CpG: 66146540225146540226rs78212696+CC/T41821.969.30.91near-gene-5
MTRRchr578688637869840CpG: 11678695907869591rs138374466+CC/T69823.771.40.94intron,near-gene-5
MTRRchr578688637869840CpG: 11678693857869388rs141755990+CC-/CCT69823.771.40.94intron,near-gene-5
MTRRchr578688637869840CpG: 11678693837869386rs150132234+CT-/CTC69823.771.40.94intron,near-gene-5
MTRRchr578688637869840CpG: 11678694557869456rs34828626+C-/C69823.771.40.94intron,near-gene-5
MTRRchr578688637869840CpG: 11678688657868866rs3822445-GC/G69823.771.40.94intron,near-gene-5
MTRRchr578688637869840CpG: 11678692347869235rs72716536+TC/T69823.771.40.94near-gene-5,untranslated-
MTRRchr578688637869840CpG: 11678697027869703rs75772655+GA/G69823.771.40.94intron,near-gene-5
MTRRchr578688637869840CpG: 11678695777869578rs75888760+CC/T69823.771.40.94intron,near-gene-5
MUTchr64943093449431136CpG: 204943097349430974rs3729619-TA/T12219.860.41.1near-gene-5,untranslated-
LMBRD1chr67050629270507024CpG: 537050649470506495rs3752787+TC/T47114.564.30.7intron