Cobalamin SNPs in CNVs Data
Gene Symbol | rsID | Chromosome | CNV Start | CNV End | Name | SNP Start | SNP End | Ref NCBI | Observed | Strand | Function | Allele Frequency | PMID | Method |
---|
MTR | rs10925246 | chr1 | 236996975 | 237019121 | nsv549426 | 237005258 | 237005259 | T | C/T | + | intron | 0.70677 | 21841781 | Oligo aCGH, SNP array | MTR | rs10925246 | chr1 | 236997481 | 237019245 | nsv470784 | 237005258 | 237005259 | T | C/T | + | intron | 0.70677 | 18288195 | SNP array | MTR | rs10925246 | chr1 | 236915547 | 237053346 | esv2762229 | 237005258 | 237005259 | T | C/T | + | intron | 0.70677 | 21179565 | Merging, SNP array | MTR | rs10925247 | chr1 | 236993443 | 237019245 | nsv549425 | 237008376 | 237008377 | C | C/T | + | intron | 0.63966 | 21841781 | Oligo aCGH, SNP array | MTR | rs10925247 | chr1 | 236996975 | 237019245 | dgv869n54 | 237008376 | 237008377 | C | C/T | + | intron | 0.63966 | 21841781 | Oligo aCGH, SNP array | MTR | rs10925247 | chr1 | 236996975 | 237019121 | nsv549426 | 237008376 | 237008377 | C | C/T | + | intron | 0.63966 | 21841781 | Oligo aCGH, SNP array | MTR | rs10925247 | chr1 | 236997481 | 237019245 | nsv470784 | 237008376 | 237008377 | C | C/T | + | intron | 0.63966 | 18288195 | SNP array | MTR | rs10925247 | chr1 | 236915547 | 237053346 | esv2762229 | 237008376 | 237008377 | C | C/T | + | intron | 0.63966 | 21179565 | Merging, SNP array | MTR | rs10925248 | chr1 | 236993443 | 237019245 | nsv549425 | 237014092 | 237014093 | G | A/G | + | intron | 0.429741 | 21841781 | Oligo aCGH, SNP array | MTR | rs10925248 | chr1 | 236996975 | 237019245 | dgv869n54 | 237014092 | 237014093 | G | A/G | + | intron | 0.429741 | 21841781 | Oligo aCGH, SNP array | MTR | rs10925248 | chr1 | 236996975 | 237019121 | nsv549426 | 237014092 | 237014093 | G | A/G | + | intron | 0.429741 | 21841781 | Oligo aCGH, SNP array | MTR | rs10925248 | chr1 | 236997481 | 237019245 | nsv470784 | 237014092 | 237014093 | G | A/G | + | intron | 0.429741 | 18288195 | SNP array | MTR | rs10925248 | chr1 | 236915547 | 237053346 | esv2762229 | 237014092 | 237014093 | G | A/G | + | intron | 0.429741 | 21179565 | Merging, SNP array | MTR | rs10925249 | chr1 | 236993443 | 237019245 | nsv549425 | 237014425 | 237014426 | C | A/C | + | intron | 0.42792 | 21841781 | Oligo aCGH, SNP array | MTR | rs10925249 | chr1 | 236996975 | 237019245 | dgv869n54 | 237014425 | 237014426 | C | A/C | + | intron | 0.42792 | 21841781 | Oligo aCGH, SNP array | MTR | rs10925249 | chr1 | 236996975 | 237019121 | nsv549426 | 237014425 | 237014426 | C | A/C | + | intron | 0.42792 | 21841781 | Oligo aCGH, SNP array | MTR | rs10925249 | chr1 | 236997481 | 237019245 | nsv470784 | 237014425 | 237014426 | C | A/C | + | intron | 0.42792 | 18288195 | SNP array | MTR | rs10925249 | chr1 | 236915547 | 237053346 | esv2762229 | 237014425 | 237014426 | C | A/C | + | intron | 0.42792 | 21179565 | Merging, SNP array | MTR | rs10925250 | chr1 | 236915547 | 237053346 | esv2762229 | 237022129 | 237022130 | A | A/G | + | intron | 0.805535 | 21179565 | Merging, SNP array | MTR | rs10925251 | chr1 | 236915547 | 237053346 | esv2762229 | 237022233 | 237022234 | G | A/G | + | intron | 0.09404 | 21179565 | Merging, SNP array | MTR | rs10925252 | chr1 | 236915547 | 237053346 | esv2762229 | 237022361 | 237022362 | T | C/T | + | intron | 0.373031 | 21179565 | Merging, SNP array | MTR | rs10925253 | chr1 | 236915547 | 237053346 | esv2762229 | 237022588 | 237022589 | C | C/T | + | intron | 0.931235 | 21179565 | Merging, SNP array | MTR | rs10925254 | chr1 | 236915547 | 237053346 | esv2762229 | 237023332 | 237023333 | T | C/T | + | intron | 0.681499 | 21179565 | Merging, SNP array | MTR | rs10925256 | chr1 | 236915547 | 237053346 | esv2762229 | 237038007 | 237038008 | T | A/T | + | intron | 0.401376 | 21179565 | Merging, SNP array | MTR | rs10925257 | chr1 | 236915547 | 237053346 | esv2762229 | 237046159 | 237046160 | A | A/G | + | intron | 0.786161 | 21179565 | Merging, SNP array | MTR | rs10925258 | chr1 | 236915547 | 237053346 | esv2762229 | 237047100 | 237047101 | C | A/C | + | intron | 0.362232 | 21179565 | Merging, SNP array | MTR | rs10925259 | chr1 | 236915547 | 237053346 | esv2762229 | 237047864 | 237047865 | T | C/T | + | intron | 0.073029 | 21179565 | Merging, SNP array | MTR | rs10925260 | chr1 | 236915547 | 237053346 | esv2762229 | 237048085 | 237048086 | A | A/C | + | intron | 0.4375 | 21179565 | Merging, SNP array | MTR | rs10925261 | chr1 | 236915547 | 237053346 | esv2762229 | 237053185 | 237053186 | C | C/T | + | intron | 0.786803 | 21179565 | Merging, SNP array | MTR | rs111494442 | chr1 | 236993443 | 237019245 | nsv549425 | 237008364 | 237008365 | C | -/C | + | intron | 0.074312 | 21841781 | Oligo aCGH, SNP array | MTR | rs111494442 | chr1 | 236996975 | 237019245 | dgv869n54 | 237008364 | 237008365 | C | -/C | + | intron | 0.074312 | 21841781 | Oligo aCGH, SNP array | MTR | rs111494442 | chr1 | 236996975 | 237019121 | nsv549426 | 237008364 | 237008365 | C | -/C | + | intron | 0.074312 | 21841781 | Oligo aCGH, SNP array | MTR | rs111494442 | chr1 | 236997481 | 237019245 | nsv470784 | 237008364 | 237008365 | C | -/C | + | intron | 0.074312 | 18288195 | SNP array | MTR | rs111494442 | chr1 | 236915547 | 237053346 | esv2762229 | 237008364 | 237008365 | C | -/C | + | intron | 0.074312 | 21179565 | Merging, SNP array | MTR | rs111840642 | chr1 | 236872742 | 236995520 | nsv833026 | 236958802 | 236958803 | C | C/G | + | untranslate | 0.989908 | 17160897 | BAC aCGH | MTR | rs111840642 | chr1 | 236915547 | 237053346 | esv2762229 | 236958802 | 236958803 | C | C/G | + | untranslate | 0.989908 | 21179565 | Merging, SNP array | MTR | rs111931082 | chr1 | 236915547 | 237053346 | esv2762229 | 237043545 | 237043546 | A | A/G | + | intron | 0.983501 | 21179565 | Merging, SNP array | MTR | rs112861144 | chr1 | 236915547 | 237053346 | esv2762229 | 237039136 | 237039140 | AG | -/AGA | + | intron | 0.250459 | 21179565 | Merging, SNP array | MTR | rs11288788 | chr1 | 236993443 | 237019245 | nsv549425 | 237013552 | 237013553 | T | -/T | + | intron | 0.36685 | 21841781 | Oligo aCGH, SNP array | MTR | rs11288788 | chr1 | 236996975 | 237019245 | dgv869n54 | 237013552 | 237013553 | T | -/T | + | intron | 0.36685 | 21841781 | Oligo aCGH, SNP array | MTR | rs11288788 | chr1 | 236996975 | 237019121 | nsv549426 | 237013552 | 237013553 | T | -/T | + | intron | 0.36685 | 21841781 | Oligo aCGH, SNP array | MTR | rs11288788 | chr1 | 236997481 | 237019245 | nsv470784 | 237013552 | 237013553 | T | -/T | + | intron | 0.36685 | 18288195 | SNP array | MTR | rs11288788 | chr1 | 236915547 | 237053346 | esv2762229 | 237013552 | 237013553 | T | -/T | + | intron | 0.36685 | 21179565 | Merging, SNP array | MTR | rs112948819 | chr1 | 236872742 | 236995520 | nsv833026 | 236967598 | 236967599 | G | C/G | + | intron | 0.012844 | 17160897 | BAC aCGH | MTR | rs112948819 | chr1 | 236915547 | 237053346 | esv2762229 | 236967598 | 236967599 | G | C/G | + | intron | 0.012844 | 21179565 | Merging, SNP array | MTR | rs11315816 | chr1 | 236872742 | 236995520 | nsv833026 | 236967795 | 236967796 | T | -/T | + | intron | 0.023875 | 17160897 | BAC aCGH | MTR | rs11315816 | chr1 | 236915547 | 237053346 | esv2762229 | 236967795 | 236967796 | T | -/T | + | intron | 0.023875 | 21179565 | Merging, SNP array | MTR | rs113277607 | chr1 | 236872742 | 236995520 | nsv833026 | 236971982 | 236971983 | C | C/T | + | intron | 0.980801 | 17160897 | BAC aCGH | MTR | rs113277607 | chr1 | 236915547 | 237053346 | esv2762229 | 236971982 | 236971983 | C | C/T | + | intron | 0.980801 | 21179565 | Merging, SNP array | MTR | rs11363843 | chr1 | 236915547 | 237053346 | esv2762229 | 237034629 | 237034630 | A | -/A | + | intron | 0.504128 | 21179565 | Merging, SNP array | MTR | rs114195114 | chr1 | 236872742 | 236995520 | nsv833026 | 236983581 | 236983582 | G | A/G | + | intron | 0.033101 | 17160897 | BAC aCGH | MTR | rs114195114 | chr1 | 236915547 | 237053346 | esv2762229 | 236983581 | 236983582 | G | A/G | + | intron | 0.033101 | 21179565 | Merging, SNP array | MTR | rs114507560 | chr1 | 236872742 | 236995520 | nsv833026 | 236960444 | 236960445 | G | A/G | + | intron | 0.016971 | 17160897 | BAC aCGH | MTR | rs114507560 | chr1 | 236915547 | 237053346 | esv2762229 | 236960444 | 236960445 | G | A/G | + | intron | 0.016971 | 21179565 | Merging, SNP array | MTR | rs114781319 | chr1 | 236915547 | 237053346 | esv2762229 | 237029780 | 237029781 | G | A/G | + | intron | 0.01176 | 21179565 | Merging, SNP array | MTR | rs114845908 | chr1 | 236993443 | 237019245 | nsv549425 | 237005938 | 237005939 | A | A/G | + | intron | 0.989111 | 21841781 | Oligo aCGH, SNP array | MTR | rs114845908 | chr1 | 236996975 | 237019245 | dgv869n54 | 237005938 | 237005939 | A | A/G | + | intron | 0.989111 | 21841781 | Oligo aCGH, SNP array | MTR | rs114845908 | chr1 | 236996975 | 237019121 | nsv549426 | 237005938 | 237005939 | A | A/G | + | intron | 0.989111 | 21841781 | Oligo aCGH, SNP array | MTR | rs114845908 | chr1 | 236997481 | 237019245 | nsv470784 | 237005938 | 237005939 | A | A/G | + | intron | 0.989111 | 18288195 | SNP array | MTR | rs114845908 | chr1 | 236915547 | 237053346 | esv2762229 | 237005938 | 237005939 | A | A/G | + | intron | 0.989111 | 21179565 | Merging, SNP array | MTR | rs114924091 | chr1 | 236915547 | 237053346 | esv2762229 | 237036264 | 237036265 | A | A/G | + | intron | 0.986945 | 21179565 | Merging, SNP array | MTR | rs115048183 | chr1 | 236915547 | 237053346 | esv2762229 | 237035137 | 237035138 | T | C/T | + | intron | 0.012631 | 21179565 | Merging, SNP array | MTR | rs115219901 | chr1 | 236872742 | 236995520 | nsv833026 | 236973275 | 236973276 | A | A/G | + | intron | 0.988686 | 17160897 | BAC aCGH | MTR | rs115219901 | chr1 | 236915547 | 237053346 | esv2762229 | 236973275 | 236973276 | A | A/G | + | intron | 0.988686 | 21179565 | Merging, SNP array | MTR | rs115550373 | chr1 | 236993443 | 237019245 | nsv549425 | 237011233 | 237011234 | T | C/T | + | intron | 0.010879 | 21841781 | Oligo aCGH, SNP array | MTR | rs115550373 | chr1 | 236996975 | 237019245 | dgv869n54 | 237011233 | 237011234 | T | C/T | + | intron | 0.010879 | 21841781 | Oligo aCGH, SNP array | MTR | rs115550373 | chr1 | 236996975 | 237019121 | nsv549426 | 237011233 | 237011234 | T | C/T | + | intron | 0.010879 | 21841781 | Oligo aCGH, SNP array | MTR | rs115550373 | chr1 | 236997481 | 237019245 | nsv470784 | 237011233 | 237011234 | T | C/T | + | intron | 0.010879 | 18288195 | SNP array | MTR | rs115550373 | chr1 | 236915547 | 237053346 | esv2762229 | 237011233 | 237011234 | T | C/T | + | intron | 0.010879 | 21179565 | Merging, SNP array | MTR | rs11576943 | chr1 | 236915547 | 237053346 | esv2762229 | 237046093 | 237046094 | C | C/T | + | intron | 0.63861 | 21179565 | Merging, SNP array | MTR | rs115783804 | chr1 | 236993443 | 237019245 | nsv549425 | 237016706 | 237016707 | A | A/G | + | intron | 0.986063 | 21841781 | Oligo aCGH, SNP array | MTR | rs115783804 | chr1 | 236996975 | 237019245 | dgv869n54 | 237016706 | 237016707 | A | A/G | + | intron | 0.986063 | 21841781 | Oligo aCGH, SNP array | MTR | rs115783804 | chr1 | 236996975 | 237019121 | nsv549426 | 237016706 | 237016707 | A | A/G | + | intron | 0.986063 | 21841781 | Oligo aCGH, SNP array | MTR | rs115783804 | chr1 | 236997481 | 237019245 | nsv470784 | 237016706 | 237016707 | A | A/G | + | intron | 0.986063 | 18288195 | SNP array | MTR | rs115783804 | chr1 | 236915547 | 237053346 | esv2762229 | 237016706 | 237016707 | A | A/G | + | intron | 0.986063 | 21179565 | Merging, SNP array | MTR | rs11589672 | chr1 | 236872742 | 236995520 | nsv833026 | 236965815 | 236965816 | C | A/C | + | intron | 0.59288 | 17160897 | BAC aCGH | MTR | rs11589672 | chr1 | 236915547 | 237053346 | esv2762229 | 236965815 | 236965816 | C | A/C | + | intron | 0.59288 | 21179565 | Merging, SNP array | MTR | rs116111784 | chr1 | 236915547 | 237053346 | esv2762229 | 237036846 | 237036847 | T | C/T | + | intron | 0.034843 | 21179565 | Merging, SNP array | MTR | rs116230972 | chr1 | 236993443 | 237019245 | nsv549425 | 237006070 | 237006071 | A | A/T | + | intron | 0.976916 | 21841781 | Oligo aCGH, SNP array | MTR | rs116230972 | chr1 | 236996975 | 237019245 | dgv869n54 | 237006070 | 237006071 | A | A/T | + | intron | 0.976916 | 21841781 | Oligo aCGH, SNP array | MTR | rs116230972 | chr1 | 236996975 | 237019121 | nsv549426 | 237006070 | 237006071 | A | A/T | + | intron | 0.976916 | 21841781 | Oligo aCGH, SNP array | MTR | rs116230972 | chr1 | 236997481 | 237019245 | nsv470784 | 237006070 | 237006071 | A | A/T | + | intron | 0.976916 | 18288195 | SNP array | MTR | rs116230972 | chr1 | 236915547 | 237053346 | esv2762229 | 237006070 | 237006071 | A | A/T | + | intron | 0.976916 | 21179565 | Merging, SNP array | MTR | rs116239811 | chr1 | 236872742 | 236995520 | nsv833026 | 236957765 | 236957766 | T | C/T | + | near-gene-5 | 0.012185 | 17160897 | BAC aCGH | MTR | rs116239811 | chr1 | 236915547 | 237053346 | esv2762229 | 236957765 | 236957766 | T | C/T | + | near-gene-5 | 0.012185 | 21179565 | Merging, SNP array | MTR | rs116530773 | chr1 | 236993443 | 237019245 | nsv549425 | 236993830 | 236993831 | C | A/C | + | intron | 0.016551 | 21841781 | Oligo aCGH, SNP array | MTR | rs116530773 | chr1 | 236872742 | 236995520 | nsv833026 | 236993830 | 236993831 | C | A/C | + | intron | 0.016551 | 17160897 | BAC aCGH | MTR | rs116530773 | chr1 | 236915547 | 237053346 | esv2762229 | 236993830 | 236993831 | C | A/C | + | intron | 0.016551 | 21179565 | Merging, SNP array | MTR | rs116668789 | chr1 | 236872742 | 236995520 | nsv833026 | 236984833 | 236984834 | A | A/G | + | intron | 0.988676 | 17160897 | BAC aCGH | MTR | rs116668789 | chr1 | 236915547 | 237053346 | esv2762229 | 236984833 | 236984834 | A | A/G | + | intron | 0.988676 | 21179565 | Merging, SNP array | MTR | rs116687145 | chr1 | 236872742 | 236995520 | nsv833026 | 236974600 | 236974601 | C | C/T | + | intron | 0.986934 | 17160897 | BAC aCGH | MTR | rs116687145 | chr1 | 236915547 | 237053346 | esv2762229 | 236974600 | 236974601 | C | C/T | + | intron | 0.986934 | 21179565 | Merging, SNP array | MTR | rs116747543 | chr1 | 236993443 | 237019245 | nsv549425 | 237003796 | 237003797 | T | G/T | + | intron | 0.010017 | 21841781 | Oligo aCGH, SNP array | MTR | rs116747543 | chr1 | 236996975 | 237019245 | dgv869n54 | 237003796 | 237003797 | T | G/T | + | intron | 0.010017 | 21841781 | Oligo aCGH, SNP array | MTR | rs116747543 | chr1 | 236996975 | 237019121 | nsv549426 | 237003796 | 237003797 | T | G/T | + | intron | 0.010017 | 21841781 | Oligo aCGH, SNP array | MTR | rs116747543 | chr1 | 236997481 | 237019245 | nsv470784 | 237003796 | 237003797 | T | G/T | + | intron | 0.010017 | 18288195 | SNP array | MTR | rs116747543 | chr1 | 236915547 | 237053346 | esv2762229 | 237003796 | 237003797 | T | G/T | + | intron | 0.010017 | 21179565 | Merging, SNP array | MTR | rs11800413 | chr1 | 236993443 | 237019245 | nsv549425 | 237002876 | 237002877 | A | A/G | + | intron | 0.652706 | 21841781 | Oligo aCGH, SNP array | MTR | rs11800413 | chr1 | 236996975 | 237019245 | dgv869n54 | 237002876 | 237002877 | A | A/G | + | intron | 0.652706 | 21841781 | Oligo aCGH, SNP array | MTR | rs11800413 | chr1 | 236996975 | 237019121 | nsv549426 | 237002876 | 237002877 | A | A/G | + | intron | 0.652706 | 21841781 | Oligo aCGH, SNP array |