Cobalamin SNPs in CNVs Data
Gene Symbol | rsID | Chromosome | CNV Start | CNV End | Name | SNP Start | SNP End | Ref NCBI | Observed | Strand | Function | Allele Frequency | PMID | Method |
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LMBRD1 | rs9354887 | chr6 | 70454571 | 70649604 | nsv830682 | 70463508 | 70463509 | G | A/G | + | intron | 0.397451 | 17160897 | BAC aCGH | LMBRD1 | rs9354888 | chr6 | 70454571 | 70649604 | nsv830682 | 70478067 | 70478068 | A | A/G | + | intron | 0.606481 | 17160897 | BAC aCGH | LMBRD1 | rs9354889 | chr6 | 70485577 | 70499367 | esv999346 | 70487300 | 70487301 | C | C/T | + | intron | 0.620075 | 20482838 | Oligo aCGH, Sequencing, SNP array | LMBRD1 | rs9354889 | chr6 | 70454571 | 70649604 | nsv830682 | 70487300 | 70487301 | C | C/T | + | intron | 0.620075 | 17160897 | BAC aCGH | LMBRD1 | rs9354890 | chr6 | 70454571 | 70649604 | nsv830682 | 70504295 | 70504296 | G | A/G | + | intron | 0.382417 | 17160897 | BAC aCGH | LMBRD1 | rs9354891 | chr6 | 70454571 | 70649604 | nsv830682 | 70505016 | 70505017 | G | A/G | + | intron | 0.395086 | 17160897 | BAC aCGH | LMBRD1 | rs9360401 | chr6 | 70454571 | 70649604 | nsv830682 | 70463954 | 70463955 | T | G/T | + | intron | 0.359174 | 17160897 | BAC aCGH | LMBRD1 | rs9360404 | chr6 | 70485577 | 70499367 | esv999346 | 70498714 | 70498715 | A | A/T | + | intron | 0.611264 | 20482838 | Oligo aCGH, Sequencing, SNP array | LMBRD1 | rs9360404 | chr6 | 70454571 | 70649604 | nsv830682 | 70498714 | 70498715 | A | A/T | + | intron | 0.611264 | 17160897 | BAC aCGH | LMBRD1 | rs9360405 | chr6 | 70454571 | 70649604 | nsv830682 | 70503511 | 70503512 | A | A/G | + | intron | 0.608516 | 17160897 | BAC aCGH | LMBRD1 | rs9360406 | chr6 | 70454571 | 70649604 | nsv830682 | 70503607 | 70503608 | A | A/T | + | intron | 0.3 | 17160897 | BAC aCGH | LMBRD1 | rs9364057 | chr6 | 70454571 | 70649604 | nsv830682 | 70461362 | 70461363 | C | C/T | + | intron | 0.607585 | 17160897 | BAC aCGH | LMBRD1 | rs9364058 | chr6 | 70454571 | 70649604 | nsv830682 | 70474754 | 70474755 | G | A/G | + | intron | 0.390625 | 17160897 | BAC aCGH | LMBRD1 | rs9364060 | chr6 | 70485577 | 70499367 | esv999346 | 70485861 | 70485862 | G | A/G | + | intron | 0.39652 | 20482838 | Oligo aCGH, Sequencing, SNP array | LMBRD1 | rs9364060 | chr6 | 70454571 | 70649604 | nsv830682 | 70485861 | 70485862 | G | A/G | + | intron | 0.39652 | 17160897 | BAC aCGH | LMBRD1 | rs9364061 | chr6 | 70485577 | 70499367 | esv999346 | 70495376 | 70495377 | T | C/T | + | intron | 0.415316 | 20482838 | Oligo aCGH, Sequencing, SNP array | LMBRD1 | rs9364061 | chr6 | 70454571 | 70649604 | nsv830682 | 70495376 | 70495377 | T | C/T | + | intron | 0.415316 | 17160897 | BAC aCGH | MUT | rs9367355 | chr6 | 49389843 | 49403067 | esv23331 | 49399983 | 49399984 | G | A/G | + | intron | 0.09821 | 19812545 | Oligo aCGH | MUT | rs9367355 | chr6 | 49394263 | 49403329 | esv2762590 | 49399983 | 49399984 | G | A/G | + | intron | 0.09821 | 21179565 | Merging, SNP array | MUT | rs9367356 | chr6 | 49389843 | 49403067 | esv23331 | 49400222 | 49400223 | T | C/T | + | intron | 0.502517 | 19812545 | Oligo aCGH | MUT | rs9367356 | chr6 | 49394263 | 49403329 | esv2762590 | 49400222 | 49400223 | T | C/T | + | intron | 0.502517 | 21179565 | Merging, SNP array | MUT | rs9369902 | chr6 | 49424443 | 49434256 | nsv965724 | 49429705 | 49429706 | C | A/C | + | intron,near | 0.10024 | 23825009 | Oligo aCGH, Sequencing | MUT | rs9369902 | chr6 | 49426983 | 49484883 | nsv603080 | 49429705 | 49429706 | C | A/C | + | intron,near | 0.10024 | 21841781 | Oligo aCGH, SNP array | MUT | rs9369902 | chr6 | 49426983 | 49484883 | nsv462943 | 49429705 | 49429706 | C | A/C | + | intron,near | 0.10024 | 19166990 | Oligo aCGH, SNP array | MUT | rs9381784 | chr6 | 49389843 | 49403067 | esv23331 | 49398114 | 49398115 | C | C/T | + | untranslate | 0.637395 | 19812545 | Oligo aCGH | MUT | rs9381784 | chr6 | 49394263 | 49403329 | esv2762590 | 49398114 | 49398115 | C | C/T | + | untranslate | 0.637395 | 21179565 | Merging, SNP array | MUT | rs9381785 | chr6 | 49389843 | 49403067 | esv23331 | 49400236 | 49400237 | G | A/G | + | intron | 0.455876 | 19812545 | Oligo aCGH | MUT | rs9381785 | chr6 | 49394263 | 49403329 | esv2762590 | 49400236 | 49400237 | G | A/G | + | intron | 0.455876 | 21179565 | Merging, SNP array | MUT | rs9395493 | chr6 | 49424443 | 49434256 | nsv965724 | 49427408 | 49427409 | T | C/T | + | intron | 0.536923 | 23825009 | Oligo aCGH, Sequencing | MUT | rs9395493 | chr6 | 49426983 | 49484883 | nsv603080 | 49427408 | 49427409 | T | C/T | + | intron | 0.536923 | 21841781 | Oligo aCGH, SNP array | MUT | rs9395493 | chr6 | 49426983 | 49484883 | nsv462943 | 49427408 | 49427409 | T | C/T | + | intron | 0.536923 | 19166990 | Oligo aCGH, SNP array | LMBRD1 | rs9446159 | chr6 | 70454571 | 70649604 | nsv830682 | 70478490 | 70478491 | T | A/T | + | intron | 0.07072 | 17160897 | BAC aCGH | LMBRD1 | rs9446161 | chr6 | 70454571 | 70649604 | nsv830682 | 70501660 | 70501661 | T | G/T | + | intron | 0.074146 | 17160897 | BAC aCGH | LMBRD1 | rs9454880 | chr6 | 70454571 | 70649604 | nsv830682 | 70455445 | 70455446 | G | A/G | + | intron | 0.069006 | 17160897 | BAC aCGH | LMBRD1 | rs9454881 | chr6 | 70454571 | 70649604 | nsv830682 | 70456782 | 70456783 | G | A/G | + | intron | 0.07069 | 17160897 | BAC aCGH | LMBRD1 | rs9454882 | chr6 | 70454571 | 70649604 | nsv830682 | 70458344 | 70458345 | G | A/G | + | intron | 0.06664 | 17160897 | BAC aCGH | LMBRD1 | rs9454887 | chr6 | 70454571 | 70649604 | nsv830682 | 70468790 | 70468791 | A | A/G | + | intron | 0.930417 | 17160897 | BAC aCGH | LMBRD1 | rs9454889 | chr6 | 70454571 | 70649604 | nsv830682 | 70475119 | 70475120 | C | A/C | + | intron | 0.068612 | 17160897 | BAC aCGH | LMBRD1 | rs9454890 | chr6 | 70485577 | 70499367 | esv999346 | 70489307 | 70489308 | A | A/G | + | intron | 0.931782 | 20482838 | Oligo aCGH, Sequencing, SNP array | LMBRD1 | rs9454890 | chr6 | 70454571 | 70649604 | nsv830682 | 70489307 | 70489308 | A | A/G | + | intron | 0.931782 | 17160897 | BAC aCGH | LMBRD1 | rs9454892 | chr6 | 70485577 | 70499367 | esv999346 | 70494212 | 70494213 | C | C/T | + | intron | 0.903791 | 20482838 | Oligo aCGH, Sequencing, SNP array | LMBRD1 | rs9454892 | chr6 | 70454571 | 70649604 | nsv830682 | 70494212 | 70494213 | C | C/T | + | intron | 0.903791 | 17160897 | BAC aCGH | LMBRD1 | rs9454893 | chr6 | 70485577 | 70499367 | esv999346 | 70496060 | 70496061 | C | C/T | + | intron | 0.930556 | 20482838 | Oligo aCGH, Sequencing, SNP array | LMBRD1 | rs9454893 | chr6 | 70454571 | 70649604 | nsv830682 | 70496060 | 70496061 | C | C/T | + | intron | 0.930556 | 17160897 | BAC aCGH | MUT | rs9463480 | chr6 | 49389843 | 49403067 | esv23331 | 49400794 | 49400795 | G | G/T | + | intron | 0.69151 | 19812545 | Oligo aCGH | MUT | rs9463480 | chr6 | 49394263 | 49403329 | esv2762590 | 49400794 | 49400795 | G | G/T | + | intron | 0.69151 | 21179565 | Merging, SNP array | MUT | rs9473560 | chr6 | 49424443 | 49434256 | nsv965724 | 49427917 | 49427918 | A | A/G | + | intron | 0.681941 | 23825009 | Oligo aCGH, Sequencing | MUT | rs9473560 | chr6 | 49426983 | 49484883 | nsv603080 | 49427917 | 49427918 | A | A/G | + | intron | 0.681941 | 21841781 | Oligo aCGH, SNP array | MUT | rs9473560 | chr6 | 49426983 | 49484883 | nsv462943 | 49427917 | 49427918 | A | A/G | + | intron | 0.681941 | 19166990 | Oligo aCGH, SNP array | MUT | rs9473561 | chr6 | 49424443 | 49434256 | nsv965724 | 49428754 | 49428755 | G | A/G | + | intron | 0.320478 | 23825009 | Oligo aCGH, Sequencing | MUT | rs9473561 | chr6 | 49426983 | 49484883 | nsv603080 | 49428754 | 49428755 | G | A/G | + | intron | 0.320478 | 21841781 | Oligo aCGH, SNP array | MUT | rs9473561 | chr6 | 49426983 | 49484883 | nsv462943 | 49428754 | 49428755 | G | A/G | + | intron | 0.320478 | 19166990 | Oligo aCGH, SNP array | LMBRD1 | rs991973 | chr6 | 70454571 | 70649604 | nsv830682 | 70481219 | 70481220 | C | C/T | + | intron | 0.897692 | 17160897 | BAC aCGH | LMBRD1 | rs991974 | chr6 | 70454571 | 70649604 | nsv830682 | 70481266 | 70481267 | G | G/T | + | intron | 0.856082 | 17160897 | BAC aCGH |